prot_Ecto-sp6_S_contig90.18338.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig90.18338.1
Unique Nameprot_Ecto-sp6_S_contig90.18338.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length225
Homology
BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: D7FL45_ECTSI (Plastoquinol--plastocyanin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL45_ECTSI)

HSP 1 Score: 417 bits (1073), Expect = 3.840e-147
Identity = 220/224 (98.21%), Postives = 223/224 (99.55%), Query Frame = 0
Query:    1 MIKAVALAALAALFGADAFVSPVASSFSGSAVAQRPTASRATSKAMKMSANEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 224
            MIKAVALAALAALFGADAFVSPVA+SFSGSAVAQRPTASRATSKAMKMS+NEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYD TGKVIRGPAPLSLALSHVEEV+GKVIFKEWKETDFRTGDKPWW
Sbjct:    1 MIKAVALAALAALFGADAFVSPVATSFSGSAVAQRPTASRATSKAMKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKEWKETDFRTGDKPWW 224          
BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: A0A836CBH8_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH8_9STRA)

HSP 1 Score: 283 bits (725), Expect = 3.540e-94
Identity = 143/221 (64.71%), Postives = 170/221 (76.92%), Query Frame = 0
Query:    4 AVALAALAALFGADAFVSPVASSFSGSAVAQRPTASRATSKAMKMSANEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 224
            AV +AA+  L  +  FV+P  S+F+G+ V  +P A    S A+KMSA E+ FVPDM+RR AMN ILAGS GV VLGLA+PYI+FFVP        GV A+DA+G +VTVE W+ATH  GSREL EGIKGDATYL V +DK +QD+GIVAVCTHLGCVVPW +AENKF+CPCHGSQY+  GKV+RGPAPLSLALSH+E   G V+FK W ETDFRTG+ PWW
Sbjct:    7 AVCVAAVTCL--SHGFVAP--SAFTGARVLSKPVAQ--ASSAIKMSAAEDAFVPDMNRRVAMNAILAGSAGVVVLGLAIPYISFFVPKSAGGAGGGVIARDAVGQDVTVEGWVATHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNMDGKVVRGPAPLSLALSHIETDTGNVVFKPWTETDFRTGEAPWW 221          
BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: A0A835YPA4_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPA4_9STRA)

HSP 1 Score: 280 bits (716), Expect = 8.280e-93
Identity = 141/211 (66.82%), Postives = 164/211 (77.73%), Query Frame = 0
Query:   17 DAFVSPVASSFSGSAVAQRPTASRATSKAM---KMSANEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 224
             AFV+P  SSF+G+ V      S+A +K++    MSA E+ FVPDM+RR AMNLILAGS GV VLGLAVPYIAFFVP        GV A+DA+G +VTVE WL TH  GSREL EGIKGDATYL V +DK +QD+GIVAVCTHLGCVVPW +AENKF+CPCHGSQY+  GKV+RGPAPLSLALSH++   GKV+FK W ETDFRTG+ PWW
Sbjct:   18 SAFVAP--SSFAGAKVV-----SKAVTKSVARTSMSAAEDAFVPDMNRRVAMNLILAGSAGVVVLGLAVPYIAFFVPKSAGNAGGGVIARDAVGQDVTVEGWLGTHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNADGKVVRGPAPLSLALSHIDTESGKVVFKPWTETDFRTGEAPWW 221          
BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: W7TXJ0_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ0_9STRA)

HSP 1 Score: 264 bits (675), Expect = 2.330e-86
Identity = 124/195 (63.59%), Postives = 149/195 (76.41%), Query Frame = 0
Query:   30 SAVAQRPTASRATSKAMKMSANEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 224
            SA   R  + R  +K M  +  EE FVPDMDRR  MN IL GS+G+NV GLAVPYIAFFVP        G+ AKDA+G++VTV+ WL+TH  G R L +G+KGDATYL+V EDK +++YG+ AVCTHLGCVVPWNKAE+KF+CPCHGSQYD TGKV+RGPAPLSLAL+HV+E +GKV+   W ETDFRT   PWW
Sbjct:   43 SASVARTNSGRIVTK-MAEAVGEEPFVPDMDRRKLMNTILLGSVGLNVAGLAVPYIAFFVPRTGGGAGGGLAAKDALGDDVTVQGWLSTHQAGDRSLVQGLKGDATYLIVKEDKTIENYGLNAVCTHLGCVVPWNKAESKFICPCHGSQYDKTGKVVRGPAPLSLALAHVKESDGKVLLTPWTETDFRTDTAPWW 236          
BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: A0A7S1U2M5_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2M5_9STRA)

HSP 1 Score: 266 bits (679), Expect = 4.390e-86
Identity = 131/224 (58.48%), Postives = 159/224 (70.98%), Query Frame = 0
Query:    1 MIKAVALAALAALFGADAFVSPVASSFSGSAVAQRPTASRATSKAMKMSANEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 224
            M+K++AL  LAA  GA AF               R    RA  +AM M+A+E+ FVPDMDRR  MN IL  S+GV  LG+AVPYI+FFVP        G  AKDA+GN+VT   WL TH  G+REL +G+KGDATYL+V +DK +++YG+ AVCTHLGCVVPWN A+ KFMCPCHGSQY+  GKV+RGPAPLSLAL+HVE  +GKV+F  W ETDFRTG+ PWW
Sbjct:   92 MLKSLALLGLAA--GAAAF---------------RAQPLRAGRRAMTMAASEDAFVPDMDRRNVMNAILTASVGVAGLGMAVPYISFFVPAGSGGGGSGTIAKDALGNDVTESGWLGTHNAGARELVQGLKGDATYLIVNDDKTLENYGLSAVCTHLGCVVPWNAAQGKFMCPCHGSQYNKEGKVVRGPAPLSLALAHVENKDGKVVFTPWTETDFRTGEAPWW 298          
BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: A0A6H5J703_9PHAE (Rieske domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J703_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 1.890e-81
Identity = 127/185 (68.65%), Postives = 149/185 (80.54%), Query Frame = 0
Query:    1 MIKAVALAALAALFGADAFVSPVASSFSGSAVAQR-PTASRATSKAMKMSANEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGK 184
            M K +A AAL A  GADAFVSP  S+FSG   AQR  T++R  +K ++M AN++ FVPDM+RRTAMNLILAGS+GV+V GLAVPY++FFVP         VTAKD+ GNEVTV+SWLATH  GSR+LAEGIKGDATYL+VTEDKK+QDYGIVAVCTHLGC+VPW + ENKF+CPCH S YD TGK
Sbjct:    1 MFKIIAFAALMAPTGADAFVSPATSTFSGGITAQRISTSARPATKLVRMDANKDDFVPDMNRRTAMNLILAGSVGVSVFGLAVPYLSFFVPPSESGRGSRVTAKDSDGNEVTVKSWLATHTAGSRDLAEGIKGDATYLMVTEDKKIQDYGIVAVCTHLGCLVPWYEDENKFICPCHNSMYDSTGK 185          
BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: A0A835ZDT9_9STRA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT9_9STRA)

HSP 1 Score: 248 bits (632), Expect = 2.920e-80
Identity = 118/182 (64.84%), Postives = 138/182 (75.82%), Query Frame = 0
Query:   48 MSANEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXG-VTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTED----KKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 224
            MSA +E +VPDM RR A+NLIL    GV VLGLA+PY+A FVP        G V A+DA+G EVT E WLATH  GSREL EG+KGDATYL+V +D    K ++D GIVAVCTH+GCVVPWN AENKF+CPCH SQYD  G+V+RGPAPLSLALSHV+   GKV+ + W ETDFRTG+ PWW
Sbjct:   26 MSAADEAYVPDMGRRQALNLILVSFTGVTVLGLAIPYVALFVPKHAEGGRSGSVVARDALGQEVTSEGWLATHLPGSRELVEGMKGDATYLIVDKDELHGKAIRDLGIVAVCTHMGCVVPWNAAENKFICPCHASQYDANGRVVRGPAPLSLALSHVDTGSGKVLLRPWTETDFRTGEAPWW 207          
BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: A0A2D5MSC7_9BACT (Cytochrome b6-f complex iron-sulfur subunit n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5MSC7_9BACT)

HSP 1 Score: 240 bits (612), Expect = 1.870e-77
Identity = 109/171 (63.74%), Postives = 131/171 (76.61%), Query Frame = 0
Query:   55 FVPDMDRRTAMNLILA-GSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 224
            FVPDM+RR  MNLIL  G +  +V GLA+PY+ FF+P        G+ A    G+ +T ESWL+TH  GSREL +G+KGDATYLVV EDKK++DYGI AVCTHLGCVVPWNK+ NKFMCPCHGSQYD +GKV+RGPAPLSLAL+H+ +  G + F +W ETDFRTG  PWW
Sbjct:   20 FVPDMERRNIMNLILVFGGLVPSVGGLAIPYVLFFIPRTSGKSEAGIPALTKSGDTITYESWLSTHASGSRELVQGLKGDATYLVVDEDKKIRDYGINAVCTHLGCVVPWNKSANKFMCPCHGSQYDESGKVVRGPAPLSLALAHITDTNGVLTFSQWTETDFRTGLNPWW 190          
BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: A0A8J5X155_DIALT (Rieske domain-containing protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X155_DIALT)

HSP 1 Score: 240 bits (612), Expect = 4.580e-77
Identity = 130/218 (59.63%), Postives = 153/218 (70.18%), Query Frame = 0
Query:    7 LAALAALFGADAFVSPVASSFSGSAVAQRPTASRATSKAMKMSANEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 224
            L A   L  A  + SP A + S SA+A   T  RAT     M+A ++ FVPDM+RR  MN +L G+  V  L LA  Y  FF P   XXXXXGVTA DA+G++VTVE WLATH  G R+L EG+KGDATYL+VT DKK++ Y + AVCTHLGCVVPWN A+ KF+CPCHGSQYD TGKV+RGPAPLSLAL+HV    GKV+   W ETDFRTG  PWW
Sbjct:    6 LLAACTLAAASGYASPRAVAPSRSALA---TTHRATPL---MAAADDGFVPDMERRVIMNALLVGATAVPGLWLAGGYAYFFAPPGSXXXXXGVTAHDALGDDVTVEKWLATHPAGDRKLVEGLKGDATYLIVTPDKKIETYALNAVCTHLGCVVPWNAAQQKFICPCHGSQYDSTGKVVRGPAPLSLALAHVNGDSGKVVLSTWTETDFRTGLAPWW 217          
BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Match: A0A7S2V1Z6_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z6_9STRA)

HSP 1 Score: 241 bits (615), Expect = 9.250e-77
Identity = 103/173 (59.54%), Postives = 130/173 (75.14%), Query Frame = 0
Query:   52 EEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVEEVEGKVIFKEWKETDFRTGDKPWW 224
            ++ F+PDM RR  MNL+LAG++G+NV    +PY+ FFVP           A DA+G+E+  + WL TH  G R L +G+KGDATYL+VTE+  ++ YG+ AVCTHLGCVVPWNKA NKF+CPCHGSQYD TGKV+RGPAPLSLAL+HVE  +GK++F+ W E DFRTG  PWW
Sbjct:   99 DDKFIPDMGRRKLMNLLLAGTVGLNVAAFGLPYVYFFVPPKQGGGSSSTNALDALGSEIKADQWLETHQTGDRSLVQGLKGDATYLIVTEENAIESYGLNAVCTHLGCVVPWNKAANKFICPCHGSQYDSTGKVVRGPAPLSLALAHVENDDGKIVFETWTEKDFRTGLDPWW 271          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig90.18338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL45_ECTSI3.840e-14798.21Plastoquinol--plastocyanin reductase n=2 Tax=Ectoc... [more]
A0A836CBH8_9STRA3.540e-9464.71Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
A0A835YPA4_9STRA8.280e-9366.82Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
W7TXJ0_9STRA2.330e-8663.59Plastoquinol--plastocyanin reductase n=2 Tax=Monod... [more]
A0A7S1U2M5_9STRA4.390e-8658.48Plastoquinol--plastocyanin reductase n=2 Tax=Phaeo... [more]
A0A6H5J703_9PHAE1.890e-8168.65Rieske domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835ZDT9_9STRA2.920e-8064.84Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
A0A2D5MSC7_9BACT1.870e-7763.74Cytochrome b6-f complex iron-sulfur subunit n=1 Ta... [more]
A0A8J5X155_DIALT4.580e-7759.63Rieske domain-containing protein n=3 Tax=Diacronem... [more]
A0A7S2V1Z6_9STRA9.250e-7759.54Plastoquinol--plastocyanin reductase n=1 Tax=Fibro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005805Rieske iron-sulphur protein, C-terminalPRINTSPR00162RIESKEcoord: 149..160
score: 66.04
coord: 182..194
score: 59.42
coord: 170..182
score: 63.46
IPR014909Cytochrome b6-f complex Fe-S subunitPFAMPF08802CytB6-F_Fe-Scoord: 56..92
e-value: 9.0E-13
score: 48.0
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 91..224
e-value: 5.4E-44
score: 151.1
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 55..224
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 134..193
e-value: 3.1E-12
score: 46.3
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 118..208
score: 23.389
NoneNo IPR availableGENE3D1.20.5.700coord: 48..90
e-value: 4.6E-11
score: 44.3
NoneNo IPR availablePANTHERPTHR10134:SF5CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT, CHLOROPLASTICcoord: 33..224
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..224
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.736
NoneNo IPR availableTMHMMTMhelixcoord: 67..89
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR014349Rieske iron-sulphur proteinPANTHERPTHR10134CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 33..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig90contigEcto-sp6_S_contig90:342499..347158 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig90.18338.1mRNA_Ecto-sp6_S_contig90.18338.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig90 341468..347158 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig90.18338.1 ID=prot_Ecto-sp6_S_contig90.18338.1|Name=mRNA_Ecto-sp6_S_contig90.18338.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=225bp
MIKAVALAALAALFGADAFVSPVASSFSGSAVAQRPTASRATSKAMKMSA
NEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGGGGSGGGV
TAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGI
VAVCTHLGCVVPWNKAENKFMCPCHGSQYDFTGKVIRGPAPLSLALSHVE
EVEGKVIFKEWKETDFRTGDKPWW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005805Rieske_Fe-S_prot_C
IPR014909Cyt_b6-f_cplx_Fe-S_su
IPR036922Rieske_2Fe-2S_sf
IPR017941Rieske_2Fe-2S
IPR014349Rieske_Fe-S_prot