mRNA_Ecto-sp6_S_contig9.18277.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18277.1 vs. uniprot
Match: D7FVB5_ECTSI (Protein phosphatase type 2A regulator/ signal transducer n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVB5_ECTSI) HSP 1 Score: 1377 bits (3564), Expect = 0.000e+0 Identity = 719/743 (96.77%), Postives = 727/743 (97.85%), Query Frame = 1
Query: 64 MPPLPAKKSPGTSYAATSNLAKQPPAVSPRAVSSLKPDTGDGATFESYLSYKPSHGEDTLAVYEAVSDPSKWLLKNKETGQEVEATAFADTLLARRPAPQWATVSPRLGSHSHGSRGWPRLQRHKAPPFQRPTLLPPGNGDVAYFPLASAGPLTPPSLQLGFSSLSSRASPLRFGARSPVSGQSFSRPRCGSNSHGRSNSDSTTSSVIFSVDAPPTFKLRNMSTTQLLPRLHPGGVRAMSFSPSGAFLATCGMDRRCCVFRVQKRRQTMALGEGSPNAAAVAVGLPVDRGMSRQPNSVCVEGRLVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSMAWEPGGEAHGGRFLTGCMDARIRLFSLDSPEVQQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFYRMDNMSLELTVECRRHGFRHSAAQRTRLATSPVRRLSVGTGDGRSHGAGGDRVXXXXXXXXXXXXXXXXXXXXXNTLGSRAGARVPGTVEERVTGLCFRPPTKGPAELAGDCSHSDGEEHRLSGASRSTGGKMGENSQEVAASPRTGGEVVAPQADEKDANGSGNLWVERLEADLLVSTNDNRSRILVSGERGVTVGFKLKGHSTEGEPGRHTAARYSDDGNFIVSGATDGNVHVWSTPTTPPGTKSVTWSSGREGHERARVCDKRVGVPVAFFAPASVAKNLGGTSSRVIVTGDNEGNCKIFCERRADGEP 2292
MPPLPAKKSPGTS AA SNLAKQPPA SPRAVSSLKPDT DGATFESYLSYKPSHGEDTLAVYEAVSDPSKWLLKNKETGQEVEATAFADTLLARRPAPQWATVSPRLGSHSHGSRGWPRLQRHKAP FQRPTLLPP NGDVAYFPLA AGPLTPPSLQLGFSSLS RASPLRFGARSPVSGQSFSRPRCGSNSHGRSNSDSTTSSVI SVDAPPTFKLRNMSTTQLLPRLHPGGVRAMSFSPSGAFLATCGMDRRCCVFRVQKRRQT+ALGEGSPNAAAVAVGLPVDRGMSRQP+SVCVEGRLVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTS+AWEPGGEAHGGRFLTGCMDARIRLFSLDSPEV+QSVLSERAVTAVAFCPGGQ FAAGGIAGNVEFYRM+NMSLELTVECRRHGFRHSAAQRTRLATSPVRRLSVGTGDGRS+GAGGDRVXXXXXXXXXXXXXXXXXXXXXNTLGSRAGARVPGTVEERVTGLCFRPPTKGPAELAGDCS SDGEEHRLSGASRSTGGKMGENSQEVA SPR GGEVVAPQADEKDANGSGNLWVERLEADLLVSTNDNRSRILVSGERGVTVGFKLKGHSTEGE GRHTAARYSDDGN IVSGATDG+VHVW TPTTPPGTKSVTWSSGREGHERARVCDKRVGVPVAFFAPASVAKNLGGTSSRVIVTGDNEGNCKIFCE+RADGEP
Sbjct: 1 MPPLPAKKSPGTSDAAASNLAKQPPAESPRAVSSLKPDTSDGATFESYLSYKPSHGEDTLAVYEAVSDPSKWLLKNKETGQEVEATAFADTLLARRPAPQWATVSPRLGSHSHGSRGWPRLQRHKAPAFQRPTLLPPSNGDVAYFPLAPAGPLTPPSLQLGFSSLSGRASPLRFGARSPVSGQSFSRPRCGSNSHGRSNSDSTTSSVILSVDAPPTFKLRNMSTTQLLPRLHPGGVRAMSFSPSGAFLATCGMDRRCCVFRVQKRRQTLALGEGSPNAAAVAVGLPVDRGMSRQPSSVCVEGRLVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSVAWEPGGEAHGGRFLTGCMDARIRLFSLDSPEVEQSVLSERAVTAVAFCPGGQSFAAGGIAGNVEFYRMENMSLELTVECRRHGFRHSAAQRTRLATSPVRRLSVGTGDGRSNGAGGDRVXXXXXXXXXXXXXXXXXXXXXNTLGSRAGARVPGTVEERVTGLCFRPPTKGPAELAGDCSDSDGEEHRLSGASRSTGGKMGENSQEVAPSPRAGGEVVAPQADEKDANGSGNLWVERLEADLLVSTNDNRSRILVSGERGVTVGFKLKGHSTEGELGRHTAARYSDDGNLIVSGATDGSVHVWPTPTTPPGTKSVTWSSGREGHERARVCDKRVGVPVAFFAPASVAKNLGGTSSRVIVTGDNEGNCKIFCEQRADGEP 743
BLAST of mRNA_Ecto-sp6_S_contig9.18277.1 vs. uniprot
Match: A0A196S6S1_BLAHN (Uncharacterized protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S6S1_BLAHN) HSP 1 Score: 102 bits (254), Expect = 3.610e-19 Identity = 71/220 (32.27%), Postives = 109/220 (49.55%), Query Frame = 1
Query: 751 RLHPGGVRAMSFSPSGAFLATCGMDRRCCVFRVQKRRQTMALGEGSPNAAAVAVGLPVDRGMSRQPNSVCVEGRLVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSMAWEPGGEAHGGRFLTGCMDARIRLFSLDSPEVQQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFYRMDNMSLELTVECR-RHG 1407
R H + M FS +LAT G D +++V+K ++++ ++ R+ +DQP+R TGH +V AW+ + LL+ S D TVR WHP N C +++H VTS+ + P EA+ F++GCMD ++R++S+ V + + +T V FCPGG+ AAG G V FY D + +ECR RHG
Sbjct: 64 RHHQNAIWTMKFSCDRKYLATGGEDGVVNIWKVRK--------------------------VTKEEWKENMDVRIFEDQPVRSYTGHTSHIVDFAWSK-NGFLLSASLDCTVRLWHPDYDN-CLCIFKHKDMVTSVDFYPEEEAY---FISGCMDRKLRVWSIPQGCVLKWTQAPSVITTVTFCPGGRLCAAGLSDGQVIFYYSDGLRYFTQMECRNRHG 252
BLAST of mRNA_Ecto-sp6_S_contig9.18277.1 vs. uniprot
Match: A0A1Q3CUH6_CEPFO (WD40 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3CUH6_CEPFO) HSP 1 Score: 80.1 bits (196), Expect = 1.840e-11 Identity = 62/233 (26.61%), Postives = 108/233 (46.35%), Query Frame = 1
Query: 757 HPGGVRAMSFSPSGAFLATCGMDRRCCVFRVQKRRQTMALGEGS-----PNAAAVAVGLPVDRGMSRQPNSVCVEGR---------------------LVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSMAWEPGGEAHGGRFLTGCMDARIRLFSLDSPEVQQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFYRMDNMSL 1377
H G + + FS G FLA+ G D+ V+ VQ+ + +++ EG+ P+ ++ PV +S P+ +G+ L+ ++P+ TGH+D V+ L+W+ LL+ S D TVR W +E C +++ H VT + + P + + F++G +DA+IR++S+ +V VTA + P GQ G G Y ++ L
Sbjct: 391 HQGSIWTIKFSSDGRFLASAGEDKVIHVWEVQEC-EILSMNEGNLTPIHPSMSSSPDRPPVLGDISPMPSEKKKKGKGSSSRRANSIPDYVHVPETVCLLSEKPVCSFTGHLDDVLDLSWSRSQ-LLLSSSMDKTVRLWD-METKSCLKLFAHNDYVTCIHFNPMDDDY---FISGSLDAKIRIWSIPERQVVNWADLHEMVTAACYTPDGQGAVIGSHKGGCRMYCTEDCKL 617
BLAST of mRNA_Ecto-sp6_S_contig9.18277.1 vs. uniprot
Match: A0A8J5HPN9_ZINOF (Uncharacterized protein n=3 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5HPN9_ZINOF) HSP 1 Score: 76.6 bits (187), Expect = 1.420e-10 Identity = 59/200 (29.50%), Postives = 90/200 (45.00%), Query Frame = 1
Query: 757 HPGGVRAMSFSPSGAFLATCGMDRRCCVFRVQKRRQTMALGEGSPNAAAVAVGLPVDRGMSRQPNSVCVEGRLVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSMAWEPGGEAHGGRFLTGCMDARIRLFSLDSPEVQQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFY 1356
H G +R M SP G +LAT G D V RV K R+ L V+ PL GH ++ L+W+ LL+ S D TVR W + C +V+ H VT + + P +A+ F+TG +D ++R++S+D V V + +TA+++ G+ FA G ++GN FY
Sbjct: 180 HKGLIRTMKLSPCGMYLATGGEDS---VVRVWKVRELDDLN--------------------------------VEGVPLHEYFGHTSDILDLSWSRS-KYLLSTSKDKTVRMWK-IGCKSCVKVFYHNDYVTCIQFHPLDDAY---FITGSVDRKVRIWSVDENIVVDWVDTRNIITAISYQADGKGFAVGTLSGNCLFY 339
BLAST of mRNA_Ecto-sp6_S_contig9.18277.1 vs. uniprot
Match: A0A1D6IU83_MAIZE (Transducin/WD40 repeat-like superfamily protein n=4 Tax=Zea mays TaxID=4577 RepID=A0A1D6IU83_MAIZE) HSP 1 Score: 73.6 bits (179), Expect = 1.790e-9 Identity = 64/239 (26.78%), Postives = 103/239 (43.10%), Query Frame = 1
Query: 757 HPGGVRAMSFSPSGAFLATCGMDRRCCVFRVQKRRQ---TMAL-GEGSPNAAAVAVGL---------PVDRGMSRQPNSVCVEGR--------------LVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSMAWEPGGEAHGGRFLTGCMDARIRLFSLDSPEVQQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFYRMDNMSLELTVE 1392
H G + ++ FS G LA+ G D V++V + ++A+ G+ P A + G P M ++P GR + +QP VL GH D V+ L W+ D LL+ S D TVR W E C + + H VT + + P + + F++G +DA++RL+S+ +V VTA ++ P GQ G G+ Y+ + L +
Sbjct: 415 HEGSIWSIKFSADGRRLASAGEDSVVRVWQVVETSAPPCSLAMDGKSGPLAPLPSPGAADGASSTTTPALASMPKKPAKGKSGGRDALPEHLVVPDKVFALAEQPACVLEGHQDDVLDLTWSKSDQ-LLSSSMDKTVRLWD-TESQACLKTFAHSDYVTCIQFNPVDDRY---FISGSLDAKVRLWSIPDRQVVDWTDLNEMVTAASYTPDGQGAIIGSHKGSCRLYKTADCKLSAEAQ 648
BLAST of mRNA_Ecto-sp6_S_contig9.18277.1 vs. uniprot
Match: UPI000B78CA60 (WD repeat-containing protein 44-like n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B78CA60) HSP 1 Score: 73.2 bits (178), Expect = 2.390e-9 Identity = 83/303 (27.39%), Postives = 132/303 (43.56%), Query Frame = 1
Query: 541 LGFSSLSSRASPLRFGARSPVSGQSFSRPR-------CGSNSHGRSNSDSTTSSVIFSVDAPPTFKLR----------NMSTTQLLPRLHPGGVRAMSFSPSGAFLATCGMDRRCCVFRV-QKRRQTMALGE----GSPNAAAVAVGLPVD---------------RGMSRQPNSVCVEGRLVD--------DQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSMAWEPGGEAHGGRFLTGCMDARIRLFSLDSPEVQQSVLSERAVTAVAFCPGGQ 1314
+G S L + S LR G RS S ++ R GS+ GR +S +T S S P ++R ++ +Q + + H G + ++ FS G LA+ G DR V+RV Q R+ L + G+ N A P RG + R+V+ D+P+ GH+D V+ L+W+ + LL+ S D TVR WH L C +++ H VT + + P + + F++G +DAR+R++S+ +V VTA + P GQ
Sbjct: 369 VGVSKLKKKGSWLR-GIRSVTSSVKGNKERRSSDERDTGSDKGGRRSSSATDDSQDVSFQGPEKVRVRQYGKSFKELSSLYKSQEI-QAHNGSIWSIKFSLDGRHLASAGEDRVIHVWRVIQGERKGELLNDKPEDGNFNFLLTANWSPEPSLLSPTADGHHEKRRRGRTSISRKSLSLDRIVEPETVFALTDKPICSFQGHLDDVLDLSWSNSQH-LLSSSMDKTVRLWH-LSSKTCLKIFSHSDYVTCIQFNPVDDRY---FISGSLDARVRIWSIPDHQVVDWNDLHEMVTAACYTPDGQ 664
BLAST of mRNA_Ecto-sp6_S_contig9.18277.1 vs. uniprot
Match: A0A7S0CSQ9_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CSQ9_MICPS) HSP 1 Score: 65.5 bits (158), Expect = 6.650e-8 Identity = 48/139 (34.53%), Postives = 64/139 (46.04%), Query Frame = 1
Query: 997 VLTGHVDSVVALAWAGG--------DNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSMAWEPGGEAHGGRFLTGCMDARIRLFSLDS-----------PEVQQSVLSE--RAVTAVAFCPGGQRFAAGGIAGNVE 1350
++ GH +V A AW+GG D+ TG+ G V CW+ + ++ GG V SMA+ P G G RI +F+L S P SV E AVTAVA+ P G+ FAAG GN+E
Sbjct: 111 IIRGHDSAVTATAWSGGGGGARLGIDSRFATGADSGRVVCWN-AKARAAMFAFDAGGPVRSMAFSPDGN----HLACGVDGGRIHVFNLRSDPTLAPPNDVQPRFHASVAGELRAAVTAVAYSPDGELFAAGDGLGNLE 244
BLAST of mRNA_Ecto-sp6_S_contig9.18277.1 vs. uniprot
Match: A0A8H5A034_FUSOX (Uncharacterized protein n=1 Tax=Fusarium oxysporum TaxID=5507 RepID=A0A8H5A034_FUSOX) HSP 1 Score: 65.1 bits (157), Expect = 9.630e-8 Identity = 41/132 (31.06%), Postives = 61/132 (46.21%), Query Frame = 1
Query: 775 AMSFSPSGAFLATCGMDRRCCVFRVQKRRQTMALGEGSPNAAAVAVGLPVDRGMSRQPNSVCVEGRLVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSMAWEP 1170
A FSPSG +LA G DR +F+V + + N + S + + +P R GH ++ L+W+ D LL+GS+D TVR WHP + C V++H VTS+A+ P
Sbjct: 74 AAEFSPSGRYLAVAGKDRSIKLFKVISTEEERLAQQRCENGTILG--------------SKSLSAPVFLSRPYREFKGHSAEILTLSWSKND-FLLSGSTDKTVRLWHPSQPT-CLRVFQHDRTVTSVAFHP 189
BLAST of mRNA_Ecto-sp6_S_contig9.18277.1 vs. uniprot
Match: X0A5H3_FUSOX (Uncharacterized protein n=6 Tax=Fusarium TaxID=5506 RepID=X0A5H3_FUSOX) HSP 1 Score: 65.5 bits (158), Expect = 3.540e-7 Identity = 45/135 (33.33%), Postives = 66/135 (48.89%), Query Frame = 1
Query: 775 AMSFSPSGAFLATCGMDRRCCVFRV---QKRRQTMALGEGSPNAAAVAVGLPVDRGMSRQPNSVCVEGRLVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSMAWEP 1170
A FSPSG +LA G DR +F+V ++ R E + ++ +PV +SR P R GH ++ L+W+ D LL+GS+D TVR WHP + C V++H VTS+A+ P
Sbjct: 74 AAEFSPSGRYLAVAGKDRSIKLFKVISTEEERLAQQKCENGTILGSKSLSIPVF--LSR---------------PYREFNGHSAEILTLSWSKND-FLLSGSTDKTVRLWHPSQPT-CLRVFQHDRTVTSVAFHP 189
BLAST of mRNA_Ecto-sp6_S_contig9.18277.1 vs. uniprot
Match: A0A1B8AJU3_FUSPO (Uncharacterized protein n=3 Tax=Fusarium sambucinum species complex TaxID=569360 RepID=A0A1B8AJU3_FUSPO) HSP 1 Score: 65.5 bits (158), Expect = 3.550e-7 Identity = 48/156 (30.77%), Postives = 74/156 (47.44%), Query Frame = 1
Query: 721 RNMSTTQLLPRLHPGG---VRAMSFSPSGAFLATCGMDRRCCVFRV---QKRRQTMALGEGSPNAAAVAVGLPVDRGMSRQPNSVCVEGRLVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSMAWEP 1170
R++ T + ++ GG + A FS SG +LA G DR VF+V ++ R E + A+ ++ PV QP R GH ++ L+W+ D LL+GS+D TVR WHP + C +++H VTS+A+ P
Sbjct: 54 RSVPQTAIGNKMSSGGDATIWAADFSLSGRYLAVAGKDRSIKVFKVIATEEERSAQQRYESQSSLASKSLLAPVFL-----------------SQPCREFKGHSAEILTLSWSKND-FLLSGSTDKTVRLWHPSQPT-CIRIFQHDRTVTSVAFHP 190 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18277.1 >prot_Ecto-sp6_S_contig9.18277.1 ID=prot_Ecto-sp6_S_contig9.18277.1|Name=mRNA_Ecto-sp6_S_contig9.18277.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=765bp MVEGGEVQAENHDRENGQESVMPPLPAKKSPGTSYAATSNLAKQPPAVSPback to top mRNA from alignment at Ecto-sp6_S_contig9:2595484..2603492+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18277.1 ID=mRNA_Ecto-sp6_S_contig9.18277.1|Name=mRNA_Ecto-sp6_S_contig9.18277.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8009bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:2595484..2603492+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:2595484..2603492+ >mRNA_Ecto-sp6_S_contig9.18277.1 ID=mRNA_Ecto-sp6_S_contig9.18277.1|Name=mRNA_Ecto-sp6_S_contig9.18277.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2295bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:2595484..2603492+ (Ectocarpus species6 EcLAC_371)back to top |