mRNA_Ecto-sp6_S_contig9.18171.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18171.1
Unique NamemRNA_Ecto-sp6_S_contig9.18171.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18171.1 vs. uniprot
Match: D8LGX2_ECTSI (Guanylate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGX2_ECTSI)

HSP 1 Score: 519 bits (1336), Expect = 3.030e-185
Identity = 270/271 (99.63%), Postives = 270/271 (99.63%), Query Frame = 1 
Query:   73 MTMSSFGPSAQRTMAAVVTASALGSVAYAWVAKGGGSRSLARTGVFGKSTVTCSAGNAAGGDAASLKPLVICGPSGVGKGTLINMLREDFPGRFGFSVSHTTRKPRPGEVDGTHYYFSDKREMQAEIDDNKFIEHANVHANLYGTSIAAVQTVTASGKICILDIDVQGVKSVRGAGRGVLDPHYLFISAPSMEVLEARLRGRGTETEEALQRRLANANAEMEYGLEADNFEKVVVNDGLEEAYAELKETAKAWYPQLALDEKTKAGNPTEA 885
            MTMSSFGPSAQRTMAAVVTASALGSVAYAWVAKGGGSRSLARTGVFGKSTVTCSAGNAAGGDAASLKPLVICGPSGVGKGTLINMLREDFPGRFGFSVSHTTRKPRPGEVDGTHYYFSDKREMQAEIDDNKFIEHANVHANLYGTSIAAVQTVTASGKICILDIDVQGVKSVRGAGRGVLDPHYLFISAPSMEVLEARLRGRGTETEEALQRRLANANAEMEYGLEADNFEKVVVNDGLEEAYAELKETAKAWYPQLALDEK KAGNPTEA
Sbjct:    1 MTMSSFGPSAQRTMAAVVTASALGSVAYAWVAKGGGSRSLARTGVFGKSTVTCSAGNAAGGDAASLKPLVICGPSGVGKGTLINMLREDFPGRFGFSVSHTTRKPRPGEVDGTHYYFSDKREMQAEIDDNKFIEHANVHANLYGTSIAAVQTVTASGKICILDIDVQGVKSVRGAGRGVLDPHYLFISAPSMEVLEARLRGRGTETEEALQRRLANANAEMEYGLEADNFEKVVVNDGLEEAYAELKETAKAWYPQLALDEKIKAGNPTEA 271
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BLAST of mRNA_Ecto-sp6_S_contig9.18171.1 vs. uniprot
Match: A0A7S3UUW8_HETAK (Guanylate kinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUW8_HETAK)

HSP 1 Score: 236 bits (603), Expect = 7.460e-74
Identity = 115/192 (59.90%), Postives = 148/192 (77.08%), Query Frame = 1 
Query:  268 LKPLVICGPSGVGKGTLINMLREDFPGRFGFSVSHTTRKPRPGEVDGTHYYFSDKREMQAEIDDNKFIEHANVHANLYGTSIAAVQTVTASGKICILDIDVQGVKSVRGAGRGVLDPHYLFISAPSMEVLEARLRGRGTETEEALQRRLANANAEMEYGLEADNFEKVVVNDGLEEAYAELKETAKAWYPQL 843
            L+PLV+ GPSGVGKGT+I ++++ + G+FGFSVSHTTR PR GE +G HY+F+D+  M+AEI+D KFIEHA VH NLYGTS+AAVQ+V+  GKICILDIDVQGV+ V+ +    L+P Y+FIS PSMEVLE RLRGR TETEEA+ +RLA A AEM+Y     NF++V +ND L+   A+++     WYP L
Sbjct:   74 LQPLVVAGPSGVGKGTIIKIIQDKYSGKFGFSVSHTTRGPREGEENGVHYHFTDQAAMRAEIEDGKFIEHAEVHGNLYGTSVAAVQSVSEEGKICILDIDVQGVQKVKASA---LEPKYIFISPPSMEVLEERLRGRKTETEEAITKRLAGAQAEMDYSAGDGNFDRVFINDNLDTCVADIESQLLEWYPSL 262
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BLAST of mRNA_Ecto-sp6_S_contig9.18171.1 vs. uniprot
Match: A0A6S9DTC0_HETAK (Guanylate kinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DTC0_HETAK)

HSP 1 Score: 235 bits (600), Expect = 2.400e-73
Identity = 118/188 (62.77%), Postives = 140/188 (74.47%), Query Frame = 1 
Query:  274 PLVICGPSGVGKGTLINMLREDFPGRFGFSVSHTTRKPRPGEVDGTHYYFSDKREMQAEIDDNKFIEHANVHANLYGTSIAAVQTVTASGKICILDIDVQGVKSVRGAGRGVLDPHYLFISAPSMEVLEARLRGRGTETEEALQRRLANANAEMEYGLEADNFEKVVVNDGLEEAYAELKETAKAWYP 837
            PL+I GPSGVGKGT+I  +  DFP  FGFSVSHTTR PRPGE+DG HY+F+DK  MQ  I + KF+EHA VH+N YG+S+A+V  V  SG+ICILDIDVQG +SV+  G  +    YLFIS PS E LEARLRGRGTETEEAL+RRL NA AE+EYG     F+ V+VND LE A +ELK+    WYP
Sbjct:   80 PLIITGPSGVGKGTIIGKMMNDFPNSFGFSVSHTTRLPRPGEIDGQHYHFTDKETMQEMIREGKFLEHAEVHSNFYGSSVASVSDVQRSGRICILDIDVQGQRSVKSGGL-LPSAKYLFISPPSFEALEARLRGRGTETEEALERRLGNAKAEIEYGTSQGVFDAVIVNDDLETASSELKQILHQWYP 266
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BLAST of mRNA_Ecto-sp6_S_contig9.18171.1 vs. uniprot
Match: A0A7S2Y2T7_9STRA (Guanylate kinase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y2T7_9STRA)

HSP 1 Score: 232 bits (592), Expect = 6.020e-73
Identity = 121/204 (59.31%), Postives = 152/204 (74.51%), Query Frame = 1 
Query:  265 SLKPLVICGPSGVGKGTLINMLREDFPG-RFGFSVSHTTRKPRPGEVDGTHYYFSDKREMQAEIDDNKFIEHANVHANLYGTSIAAVQTVTASGKICILDIDVQGVKSVRGAGRGVLDPHYLFISAPSMEVLEARLRGRGTETEEALQRRLANANAEMEYGLEADNFEKVVVNDGLEEAYAELKETAKAWYPQL---ALDEKTK 864
            SLKP+V CGPSGVGKGTLI +L++ FP  +FGFSVSHTTRKPR GEVDG HY F    E++ EI + KFIE+A VH   YGTS+AAV++V +SGKICILDIDVQGV+ V+      L+P+Y+FI+ PS E LE RLRGRGTE EEA++ RL NA AE+EYG +A NF++V VN  L++ + +L E  K WYP L   A D++ K
Sbjct:    8 SLKPVVFCGPSGVGKGTLIELLQKRFPNEQFGFSVSHTTRKPREGEVDGVHYNFISVDEIKKEIGEGKFIEYAEVHGKYYGTSVAAVESVQSSGKICILDIDVQGVQKVK---LSKLEPYYIFIAPPSKEELEKRLRGRGTEAEEAIKTRLGNAAAELEYGQQAGNFDRVFVNADLKQCFEDLAECIKEWYPHLVEVAFDDEQK 208
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BLAST of mRNA_Ecto-sp6_S_contig9.18171.1 vs. uniprot
Match: A0A7R9ZPL3_9STRA (Guanylate kinase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZPL3_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.760e-72
Identity = 116/192 (60.42%), Postives = 146/192 (76.04%), Query Frame = 1 
Query:  271 KPLVICGPSGVGKGTLINMLREDFPG-RFGFSVSHTTRKPRPGEVDGTHYYFSDKREMQAEIDDNKFIEHANVHANLYGTSIAAVQTVTASGKICILDIDVQGVKSVRGAGRGVLDPHYLFISAPSMEVLEARLRGRGTETEEALQRRLANANAEMEYGLEADNFEKVVVNDGLEEAYAELKETAKAWYPQL 843
            KP+V CGPSGVGKGTLI ML + FP  +FGFSVSHTTRKPR GEVDG HY+F+    ++ EIDD KF+E+A VH N YGTS+ +V++V   GKIC+LDIDVQGV++V+   +  L+  Y FI+ PSME LE RLRGRGTETEEA+ +RL N+  E+EYG E  NF+KV VND LE+ +A++ E+ K WYP L
Sbjct:   71 KPVVFCGPSGVGKGTLIEMLMKHFPNEQFGFSVSHTTRKPREGEVDGKHYHFTTVDAIKKEIDDGKFVEYAEVHGNYYGTSVQSVESVQKGGKICVLDIDVQGVRAVK---KSSLECTYCFIAPPSMEALEKRLRGRGTETEEAITKRLKNSKEELEYGNEEGNFDKVFVNDDLEKTFAQVVESFKGWYPHL 259
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BLAST of mRNA_Ecto-sp6_S_contig9.18171.1 vs. uniprot
Match: A0A7S4QQL9_9STRA (Guanylate kinase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QQL9_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.820e-71
Identity = 118/192 (61.46%), Postives = 143/192 (74.48%), Query Frame = 1 
Query:  271 KPLVICGPSGVGKGTLINMLREDFPG-RFGFSVSHTTRKPRPGEVDGTHYYFSDKREMQAEIDDNKFIEHANVHANLYGTSIAAVQTVTASGKICILDIDVQGVKSVRGAGRGVLDPHYLFISAPSMEVLEARLRGRGTETEEALQRRLANANAEMEYGLEADNFEKVVVNDGLEEAYAELKETAKAWYPQL 843
            +P++  GPSGVGKGTLI ML + FP  +FGFSVSHTTRKPR GEVDG HY FS    M+ EID+ KFIE+A VH N YGTS+A+V+ V ++GKICILDIDVQGV+SV+   +  L+P YLFIS PSME LE RLRGRGTETEEA+Q+RL NA  E+EYG    NF++V VND L   +  + +  K WYP L
Sbjct:   57 QPVIFAGPSGVGKGTLIEMLMKRFPDEQFGFSVSHTTRKPREGEVDGVHYNFSTVETMKKEIDEGKFIEYAEVHGNYYGTSVASVEKVQSAGKICILDIDVQGVQSVK---KSALEPIYLFISPPSMEELERRLRGRGTETEEAMQKRLGNAAKELEYGQGEGNFDRVFVNDNLNGTFDAMVKAFKGWYPHL 245
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BLAST of mRNA_Ecto-sp6_S_contig9.18171.1 vs. uniprot
Match: A0A7S1YXY1_TRICV (Guanylate kinase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YXY1_TRICV)

HSP 1 Score: 238 bits (607), Expect = 5.230e-71
Identity = 119/208 (57.21%), Postives = 152/208 (73.08%), Query Frame = 1 
Query:  259 AASLKPLVICGPSGVGKGTLINMLREDFPGRFGFSVSHTTRKPRPGEVDGTHYYFSDKREMQAEIDDNKFIEHANVHANLYGTSIAAVQTVTASGKICILDIDVQGVKSVRGAGRGVLDPHYLFISAPSMEVLEARLRGRGTETEEALQRRLANANAEMEYGLEADNFEKVVVNDGLEEAYAELKETAKAWYPQLALDEKTKAGNPTE 882
            A++ +P V CGPSGVGKGTLI +L + +P  FGFSVSHTTR PR GE DG HY F+   +++ +IDD KFIEHA VH   YGTS+AAV+TV  SGKIC+LDIDVQGV+SV+G+    L+P Y+FI+ PSME LE RLRGRGTE+EE +++RLANA  EM+YG+   NF++V  ND L++ +A L E  + WYP LA   K   G P +
Sbjct:  207 ASTPRPAVFCGPSGVGKGTLIELLMKKYPDSFGFSVSHTTRPPREGEKDGVHYNFTTVDDIKRDIDDGKFIEHAEVHGKYYGTSVAAVETVRESGKICVLDIDVQGVRSVKGSA---LEPIYVFIAPPSMEALEERLRGRGTESEEDVKKRLANAQGEMDYGMVEGNFDRVFTNDDLDKTFAALAEAFEGWYPHLA---KKSGGEPAK 408
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BLAST of mRNA_Ecto-sp6_S_contig9.18171.1 vs. uniprot
Match: A0A7S3QIT1_9STRA (Guanylate kinase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QIT1_9STRA)

HSP 1 Score: 226 bits (577), Expect = 6.200e-71
Identity = 117/196 (59.69%), Postives = 148/196 (75.51%), Query Frame = 1 
Query:  262 ASLKPLVICGPSGVGKGTLINMLREDFPG-RFGFSVSHTTRKPRPGEVDGTHYYFSDKREMQAEIDDNKFIEHANVHANLYGTSIAAVQTVTASGKICILDIDVQGVKSVRGAGRGVLDPHYLFISAPSMEVLEARLRGRGTETEEALQRRLANANAEMEYGLEADNFEKVVVNDGLEEAYAELKETAKAWYPQLA 846
            A+ +P+VICGPSG GKGTLI  L E FP  +FGFSVSHT+RKPR GEVDGTHY FS   +M+AEI   KFIE+A VH N YGTS+  V++V + GKICILDID QGV++V+   +  L+P+Y+FI+ PSME LE+RLRGRGTE EE +Q+RLANA  EM YG E+  F+K ++N  + EA AEL  T +AW+P L+
Sbjct:    7 ANPRPIVICGPSGAGKGTLIGKLMETFPNEKFGFSVSHTSRKPREGEVDGTHYNFSTVEKMKAEISAGKFIEYAEVHGNYYGTSVEGVKSVQSKGKICILDIDCQGVRNVK---KSSLNPYYIFIAPPSMEDLESRLRGRGTEKEEDIQKRLANAAGEMAYGKES-KFDKYLINTNIPEASAELSSTIEAWFPDLS 198
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BLAST of mRNA_Ecto-sp6_S_contig9.18171.1 vs. uniprot
Match: B8BXT9_THAPS (Guanylate kinase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXT9_THAPS)

HSP 1 Score: 228 bits (581), Expect = 6.430e-71
Identity = 110/192 (57.29%), Postives = 145/192 (75.52%), Query Frame = 1 
Query:  271 KPLVICGPSGVGKGTLINMLREDFPGRFGFSVSHTTRKPRPGEVDGTHYYFSDKREMQAEIDDNKFIEHANVHANLYGTSIAAVQTVTASGKICILDIDVQGVKSVRGAGRGVLDPHYLFISAPSMEVLEARLRGRGTETEEALQRRLANANAEMEYGLEADNFEKVVVNDGLEEAYAELKETAKAWYPQLA 846
            +P+VI GPSGVGKGTLI +LR+ +P  FGFSVSHTTRKPR GE DG HY F+    ++ EID+ KF+E+ANVH N YGTS+ AV++V   GKICILDIDVQGV++V+   +  LD  Y+F++ PSM+ LE RLRGRGTETEEA+ +RL NA  E+++GL   NF++V  ND L++ +  + E  K+WYPQL+
Sbjct:   55 RPVVIAGPSGVGKGTLIELLRKKYPTEFGFSVSHTTRKPREGEQDGVHYNFTTVETIKGEIDEGKFVEYANVHGNYYGTSVQAVESVQKQGKICILDIDVQGVRNVK---KSALDAIYVFVAPPSMDELEKRLRGRGTETEEAVLKRLGNAKVELDFGLGEGNFDRVFTNDDLDKTFEAMVEQFKSWYPQLS 243
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BLAST of mRNA_Ecto-sp6_S_contig9.18171.1 vs. uniprot
Match: K8YWT3_NANGC (Guanylate kinase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YWT3_NANGC)

HSP 1 Score: 231 bits (589), Expect = 7.470e-71
Identity = 117/193 (60.62%), Postives = 147/193 (76.17%), Query Frame = 1 
Query:  268 LKPLVICGPSGVGKGTLINMLREDFPGRFGFSVSHTTRKPRPGEVDGTHYYFSDKREMQAEIDDNKFIEHANVHANLYGTSIAAVQTVTASGKICILDIDVQGVKSVRGAGRGVLDPHYLFISAPSMEVLEARLRGRGTETEEALQRRLANANAEMEYGLEADNFEKVVVNDGLEEAYAELKETAKAWYPQLA 846
            L+PLVICGPSGVGKGTL+NML E+F G FGFSVSHTTR PRPGEV+G HY F+ +  M+A I++ +F+E A VH NLYGTS+ AV+ V  +GK+C+LDIDVQGV  V+      ++PHY+FI+ PS+E LEARLRGRGTE+ + ++ RL  A  E+EYGL   NFE VVVND LE+AYA+LK T   +Y  LA
Sbjct:  145 LRPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEVEGVHYNFTSRDAMEAAIEEGRFLEFARVHTNLYGTSLEAVRQVQRAGKVCVLDIDVQGVIKVKETD---VNPHYVFIAPPSVEHLEARLRGRGTESAKDIETRLGAARTEIEYGLAKGNFEHVVVNDTLEKAYADLKTTLVGFYSHLA 334
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGX2_ECTSI3.030e-18599.63Guanylate kinase n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A7S3UUW8_HETAK7.460e-7459.90Guanylate kinase n=1 Tax=Heterosigma akashiwo TaxI... [more]
A0A6S9DTC0_HETAK2.400e-7362.77Guanylate kinase n=1 Tax=Heterosigma akashiwo TaxI... [more]
A0A7S2Y2T7_9STRA6.020e-7359.31Guanylate kinase n=1 Tax=Amphiprora paludosa TaxID... [more]
A0A7R9ZPL3_9STRA1.760e-7260.42Guanylate kinase n=1 Tax=Craspedostauros australis... [more]
A0A7S4QQL9_9STRA1.820e-7161.46Guanylate kinase (Fragment) n=1 Tax=Ditylum bright... [more]
A0A7S1YXY1_TRICV5.230e-7157.21Guanylate kinase n=1 Tax=Trieres chinensis TaxID=1... [more]
A0A7S3QIT1_9STRA6.200e-7159.69Guanylate kinase n=1 Tax=Chaetoceros debilis TaxID... [more]
B8BXT9_THAPS6.430e-7157.29Guanylate kinase n=1 Tax=Thalassiosira pseudonana ... [more]
K8YWT3_NANGC7.470e-7160.62Guanylate kinase n=3 Tax=Monodopsidaceae TaxID=425... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1576384..1581184 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score522.3
Seed ortholog evalue1.5e-145
Seed eggNOG ortholog2880.D8LGX2
Preferred nameGUK1
Model size889
KEGG rclassRC00002,RC00649
KEGG koko:K00942,ko:K11151,ko:K15538
KEGG ReactionR00332,R02090,R03048,R08379,R08380
KEGG Pathwayko00230,ko00830,ko01100,map00230,map00830,map01100
KEGG ModuleM00050
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006185,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009151,GO:0009152,GO:0009153,GO:0009161,GO:0009162,GO:0009163,GO:0009165,GO:0009167,GO:0009170,GO:0009179,GO:0009180,GO:0009182,GO:0009183,GO:0009185,GO:0009186,GO:0009188,GO:0009189,GO:0009199,GO:0009200,GO:0009201,GO:0009205,GO:0009206,GO:0009215,GO:0009225,GO:0009259,GO:0009260,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015031,GO:0015833,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017144,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019673,GO:0019692,GO:0019693,GO:0032501,GO:0032502,GO:0033036,GO:0034404,GO:0034436,GO:0034641,GO:0034654,GO:0040008,GO:0042278,GO:0042451,GO:0042455,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046034,GO:0046037,GO:0046039,GO:0046054,GO:0046060,GO:0046066,GO:0046128,GO:0046129,GO:0046385,GO:0046390,GO:0046483,GO:0046710,GO:0046711,GO:0046939,GO:0046940,GO:0048229,GO:0048638,GO:0048856,GO:0050145,GO:0050789,GO:0050793,GO:0051179,GO:0051234,GO:0055086,GO:0065007,GO:0071702,GO:0071704,GO:0071705,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901264,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
Exons6
EggNOG free text desc.guanylate kinase activity
EggNOG OGsCOG0194@1,KOG0707@2759
Ec32 ortholog descriptionGuanylate kinase (IC)
Ec32 orthologEc-14_001590.1
EC2.7.4.8,3.2.1.130
Cds size888
COG Functional cat.F
CAZyGH99
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18171.1prot_Ecto-sp6_S_contig9.18171.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 1576384..1581184 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350533.5551326-CDS-Ecto-sp6_S_contig9:1576383..15766011682350533.5551326-CDS-Ecto-sp6_S_contig9:1576383..1576601Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1576384..1576601 +
1682350533.5692952-CDS-Ecto-sp6_S_contig9:1577934..15780251682350533.5692952-CDS-Ecto-sp6_S_contig9:1577934..1578025Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1577935..1578025 +
1682350533.5784845-CDS-Ecto-sp6_S_contig9:1578749..15789491682350533.5784845-CDS-Ecto-sp6_S_contig9:1578749..1578949Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1578750..1578949 +
1682350533.587546-CDS-Ecto-sp6_S_contig9:1579969..15801371682350533.587546-CDS-Ecto-sp6_S_contig9:1579969..1580137Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1579970..1580137 +
1682350533.5963216-CDS-Ecto-sp6_S_contig9:1580510..15806011682350533.5963216-CDS-Ecto-sp6_S_contig9:1580510..1580601Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1580511..1580601 +
1682350533.6054285-CDS-Ecto-sp6_S_contig9:1581064..15811841682350533.6054285-CDS-Ecto-sp6_S_contig9:1581064..1581184Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1581065..1581184 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18171.1

>prot_Ecto-sp6_S_contig9.18171.1 ID=prot_Ecto-sp6_S_contig9.18171.1|Name=mRNA_Ecto-sp6_S_contig9.18171.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=296bp
ERDTHISRHTGLCLSSLLVSHTIPMTMSSFGPSAQRTMAAVVTASALGSV
AYAWVAKGGGSRSLARTGVFGKSTVTCSAGNAAGGDAASLKPLVICGPSG
VGKGTLINMLREDFPGRFGFSVSHTTRKPRPGEVDGTHYYFSDKREMQAE
IDDNKFIEHANVHANLYGTSIAAVQTVTASGKICILDIDVQGVKSVRGAG
RGVLDPHYLFISAPSMEVLEARLRGRGTETEEALQRRLANANAEMEYGLE
ADNFEKVVVNDGLEEAYAELKETAKAWYPQLALDEKTKAGNPTEA*
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mRNA from alignment at Ecto-sp6_S_contig9:1576384..1581184+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18171.1 ID=mRNA_Ecto-sp6_S_contig9.18171.1|Name=mRNA_Ecto-sp6_S_contig9.18171.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4801bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1576384..1581184+ (Ectocarpus species6 EcLAC_371)
GAACGCGACACACACATCAGTCGTCACACTGGCCTTTGCTTGTCCTCTCT
TCTTGTCTCGCACACCATTCCCATGACCATGTCGTCGTTCGGTCCCTCTG
CGCAGCGCACCATGGCCGCTGTGGTCACGGCCTCGGCGCTGGGGTCGGTC
GCGTACGCGTGGGTGGCCAAGGGCGGTGGGTCGAGGTCACTGGCTAGGAC
TGGCGTGTTCGGCAAGAGGTACGCTGATGTTCGCCTTGACCCCTTCGTCG
TCGCGTGTAGCCCCCTAGAAAACCAAGAGGAGGTCATTACCCTCGTTTGT
ATGGAGAGGAAGGCACGTGTGTGCGCTGCGTACGCCTCCTGCTTGGTATC
TATGAGTGTACAGCAGTAGTGTTCGGCAAGAACCAGAACGTCTATTCAGA
TTCGAAAAACTTTCCGACCAACACGTAGGCACAGCGCAGCTCAGCAAACA
CTGTTAGTAGTTGGATGCACAGGCCGACTCGGTCTGTTTGTTCCGCAGGC
CGACTCGGTCTGTTTGTTCCGCCGCAGGAGAGGAGATGAATCAACGCTCC
CGGCACGCGCACGCCCAAAACTGCCAGCCGGGTGCTTCTTGGAACTGCGT
CCGCGAAGCGGTGCTGATGCAGCGTGGAGATGAAATTTAAAATTTATTCT
ACTCTCACGCGCGGCCTCCGTTTTGTGCAACACATGTAGTTCGTCCGCTA
TTCGTCCATCGTTGCTATGCATAGAAATATCTATAGATGTAGGGGTTGAG
GTGGTGGTGTCGGCCCACAGCTATATAGCTGTGAAAACATTTCGCGCGTA
CGTAAGCGTACAGCAGTCTTCCTGACACCTGATTACACTTCGCCTGCTAA
CAACACCAGCAGCCCTCGGTGTTATTTAGTCGCAGACGCCGTTACTCTCT
ATTATAGAGAAAACCCTGACCTCACTACTTGGACGTCCTGCTGCTGTATG
CATACGCCACATTACCAAATTACCCCACGGAGAGAAAAAAGAAACCTCGT
AGCACGAAGCCGCATGCATGTGGTGGCTCGTATAGTACTACAAGCTATGT
ACTTCCAAGTACAATAGTAGGATGATTATGGGTGAATTCGTTCGCCAGGC
TCGGGTTCACAGACACTGCTGTCGAGCGAAGACGTGTACTGCTGTACCTC
GCTGGCTGTTCTGGTAAGACAACCTAATCCTGAGCCACAACCTACAAGCC
CACAAAAGACTTATTCGATCTCGTCCGAGTAATCATCGAACCCGGTCGTC
TCAGGGCACGGGAAGGTTAGACCGAAGTGTTTTAGGTTGATAAGTTTAAT
GACCTCGGCTGTACGTCGTCCGCTTGGTCCCAACCTACACTATGCACAGC
AGTAACTCCACCACCAACCCCCTCTCTCACGGATAACACCAATTGCCTCA
AACCCGTTGTCTCAGGCACTATACACGTCACCCCCTCCCCCCCCCCCCTG
ATGCCTCCTCTCAGCCAACACCTTTGTCTTCTCCGTGAATTTCGCCCCGC
TTTCCTCTCCGCCTGTCTCTCAATCCGTCGTCCATCTCTCTGCCTGAGCA
GCACGGTTACCTGCTCTGCGGGCAATGCTGCCGGCGGCGACGCGGCTAGC
CTCAAGCCCCTCGTCATTTGCGGCCCATCCGGTGTGGGGAAGGTACGTGG
GTGTGATGTTTGGTGAGCGGGAGGATGTGTGTGGGAGGGATCGCGGGCGT
TGAGACCAAGGACCTTGGAGGCACTCAACGGGGGGGGGGCGACGGAAGGT
GGTACGGCCGGCAGGACGCATCCTGAGGCGTGTTCCGTGTTTGCAGAACC
GCGGTTGCTAGCGGACCATCGATGTTGTTGTCCATGCTGCAACTGGAAAG
CTGTCGAAACTACATCTACAATTTCCCCGAGTGTCCAGACGGCCTCGATT
TTTTATTTATGCTGTCGGGGCCCCCGCCATGTGGTACCGCAGTATGCGCT
ATCCTCGAGTAGAGTTATGCCACCATGGGCTTGCAACGACAGCACCAACA
GCAGCGGAAAACAAGAAACGCGATGGAAAGACGGACTGCCACCCAAAGCC
ACGCTCGTTGACTAGTTTTCCAGAAATCGTGTGTAGTTTTTGTTCTCTTC
AACCTCCCCCCAACTGAAACCCCGCCGTCTTTCGGAGAGATTTTACTCAA
CCACCCTACCGTATTTTTGTTGTTTTTTGTGAGTGTGGATGCATAGCAGT
GTACCGTTTTGGGGTAGAGGTGGGCCTGTGGCCACGGAAAGCGTCCGCGT
ACATTGGACCGGTACGGATTCCAGAAGGAACTGAGCAGTTACCGGAAGGG
CTTGCAATATCAAGACAACAGCTGACAACAACAACAACAACGACAATCAC
AACGCTCCCCCGGCAGGGCACGCTGATCAACATGCTGCGCGAAGACTTTC
CCGGTCGATTCGGTTTCTCCGTGAGCCACACCACGAGGAAGCCGAGGCCC
GGAGAGGTGGACGGCACGCACTACTACTTCAGCGATAAGCGGGAGATGCA
GGCGGAGATCGACGACAACAAGTTCATCGAGCACGCGAACGTGCACGCGA
ACTTGTACGGAACGAGGTACATATGCGTAAAATGAGAGAAGGCGTTTTGC
ATATGCAGGCATATATGCAAGCATTACAGTATGGAACTTGTTGGGCTTAA
CGCATCACCAAAGGGGGAGTTAGTGTTCTTTGAGGTGGTTTGTCTTGAGA
GATGTTTTCGGGATCGATGTCGTCGGGCGCTGGACTGTGTAGTGTTTTCT
TATTGTAGTGCGTGCGTGCGTGTTGCCTGTTTTTTGTTATTGGCATCGAC
GCTTACCGATTGCCCATTGAAAAGACGTCAGTCTCGGAGCGGTTTTGCAG
AAAATGCATTTGAAGGCCAGGATCTGGTACCCAATGAGTGTGTGTGTGTT
TCTTTCGGTAGCATCGACCGCTTCAACCGGCCCATCAATGAAAACACGTC
AGCTTTTTTTTTTCTTTTTCGTTCTTTTATCGCGAACACGCTTAGGTACG
TGTGTGCGTGTGTTTTTTTTTGGGGGGGGAGGTCGATCGGTCAGGTTACG
TGGATGCAAAGAGTGGCAACGCCAGGAAACCTTCGGAGCTACACGTATCT
ATTTATCGATCTATCTATCCAGCTTGCGCGGTACAGTATGAGCATGGCCG
GAGTGCAGTGCTCCCACACTCCCTGCCATTGTATGTGAGTTATCGCATCT
CCTCTATTCTGTTTGTCGCCCCAAGTGGAGGCAGCGGCGCCAACGACAGT
GTCCGACACACGCTCACACGCTCGCCCGTTCCTTTTGAACAGCGCGCTTT
GGTACCCGCTTCGATACGGGCACAAGCCCGGGACGTGCCTCCTCTTGCAG
ACCCTATCGGTTGTTGTTGTTGAATGCCAGTGACTGTACACACACGGCCA
ATTAGTCCCCACTGCGGTCCCCGGCCCGCTTCCTATTGCAACTCGTTGCG
GGGGGCACCGGAACACACATGAAGGAGTACCAAAAACAAAGCGTCTTGTT
TTTTTTCTCTAACCACAAAGCCCGCTCTCCTCTCCTCCCGCCGCCTCTTC
CCGTCGACGATTTGCTGCACTCTGCATACCTTGTAGCATCGCGGCGGTCC
AGACCGTCACCGCTTCAGGAAAGATCTGCATCCTCGACATCGACGTCCAG
GGCGTCAAGTCCGTCCGCGGCGCGGGCCGGGGCGTGTTGGACCCGCACTA
CCTCTTCATCTCGGCGCCGTCGATGGAGGTGTTGGAGGCCAGGCTTAGGG
GCAGGTGTGTGCGGCTGTTTGCCCCCCCTGAATGTCGCGTGTTGTATTGA
AAGGGCGTCAAGAACTGGCTCGACAGTATTTTGGGTCTCTCGACCAAACG
TGCTGGTTGTTGGGACAATCGAACGATGCCATCGTCTCTCTCTCTTGTCT
CTCTCTCTCTCCCCCGCCCTCCCTTGTCGAACTTGTCAGATAGATCACCT
TTGTGGCTGCCCCATATGGAAAGACTTGACTTTTTTTTCACAAACACGTT
TTGTTTTTAGTTGAACAACAGTTCAACTCCGCTGATACTTTCGTATTTAT
CTGTCGGATTTTGTTCATCTCCCAGCTTTTTTTTTTGGTGCGTGTGTCTA
ACTCACTTTGATGTCTTCGCAACTCAGAGGGACGGAGACGGAAGAGGCTC
TGCAGCGACGATTGGCCAACGCGAACGCGGAGATGGAGTATGGGCTGGAG
GCCGACAACTTCGAGAAGGTATGCATGCTCTCACTACCTTCCTGTGCACA
GTAGCAAGGACCTCGGGCTTACAACACACCTAGAACGGTTAACACACAAC
ACAAAAGAACCGGGGAGCAAGAAAAGAGATCCGAGAAGAATGAAGGACTG
ATTGGCTCAGGTGTGCTTGTTGGGTAGGGTTTCGCGGTAAAGATGAGCTG
CTGTGATGCGGGTAAGGGTAGTCTCATCTGAGGCCCGCCCCGAAGGCTGG
TGATGGGTTGGCTGACGTTTCTTTACCCTCCCCTCGGCGCTCGTCAGGTT
ACGGAAAACATTTTTTGAGTCACCTTTGGCAAAGTAGGGAGGAACAGTTG
GCCATCGGCGCTCGGCCCTGTGGGAAACAATGCTCCGTACTCTCTCGAGG
ACGCGTGGTCAAAACAACGAAGGCATGCAAAACATATAATAGTAAGAGCA
CGCCCCCCTTCCCTCTGCGTTCGTGCGCCAGGTGGTGGTCAACGATGGCC
TCGAGGAGGCGTACGCGGAGTTGAAGGAGACAGCCAAGGCGTGGTACCCC
CAGCTCGCGTTGGACGAGAAAACCAAGGCCGGAAACCCGACCGAGGCGTA
A
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1576384..1581184+

>mRNA_Ecto-sp6_S_contig9.18171.1 ID=mRNA_Ecto-sp6_S_contig9.18171.1|Name=mRNA_Ecto-sp6_S_contig9.18171.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=888bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1576384..1581184+ (Ectocarpus species6 EcLAC_371)
GAACGCGACACACACATCAGTCGTCACACTGGCCTTTGCTTGTCCTCTCT
TCTTGTCTCGCACACCATTCCCATGACCATGTCGTCGTTCGGTCCCTCTG
CGCAGCGCACCATGGCCGCTGTGGTCACGGCCTCGGCGCTGGGGTCGGTC
GCGTACGCGTGGGTGGCCAAGGGCGGTGGGTCGAGGTCACTGGCTAGGAC
TGGCGTGTTCGGCAAGAGCACGGTTACCTGCTCTGCGGGCAATGCTGCCG
GCGGCGACGCGGCTAGCCTCAAGCCCCTCGTCATTTGCGGCCCATCCGGT
GTGGGGAAGGGCACGCTGATCAACATGCTGCGCGAAGACTTTCCCGGTCG
ATTCGGTTTCTCCGTGAGCCACACCACGAGGAAGCCGAGGCCCGGAGAGG
TGGACGGCACGCACTACTACTTCAGCGATAAGCGGGAGATGCAGGCGGAG
ATCGACGACAACAAGTTCATCGAGCACGCGAACGTGCACGCGAACTTGTA
CGGAACGAGCATCGCGGCGGTCCAGACCGTCACCGCTTCAGGAAAGATCT
GCATCCTCGACATCGACGTCCAGGGCGTCAAGTCCGTCCGCGGCGCGGGC
CGGGGCGTGTTGGACCCGCACTACCTCTTCATCTCGGCGCCGTCGATGGA
GGTGTTGGAGGCCAGGCTTAGGGGCAGAGGGACGGAGACGGAAGAGGCTC
TGCAGCGACGATTGGCCAACGCGAACGCGGAGATGGAGTATGGGCTGGAG
GCCGACAACTTCGAGAAGGTGGTGGTCAACGATGGCCTCGAGGAGGCGTA
CGCGGAGTTGAAGGAGACAGCCAAGGCGTGGTACCCCCAGCTCGCGTTGG
ACGAGAAAACCAAGGCCGGAAACCCGACCGAGGCGTAA
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