mRNA_Ecto-sp6_S_contig9.18112.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18112.1 vs. uniprot
Match: D8LLY4_ECTSI (MSP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLY4_ECTSI) HSP 1 Score: 585 bits (1508), Expect = 1.220e-210 Identity = 302/307 (98.37%), Postives = 304/307 (99.02%), Query Frame = 1
Query: 1 MAAHDALFALECLPSKVLDFALEDGAEPAECVLHLTNNGSESVAFKVKTTKPKRYLVRPNQGVVAPSEDLPVSIVLLAHDKVGLISEFMQTGGCNETNKFMVQALPLQGESATAGAVPPGLWEEAKARVQQKKLVVHFTFPRPSIPPSSAETLKQASNGVRDAIAGDSSRSRFATGIEDGLQGGAGGDGSDMSQDQMWAQAAELRRKYDDLVSFTINLTAEKDLIQRSLGATKEDLAREQQARKLLETKMMEPGARRPAGSVVGSTSPSESRSGFSLFFVLIVAALALFAGQWTAANGYPLLLGSKS 921
MAA DALFALECLPSKVLDFALEDGAEPAECVLHLTNNGSESVAFKVKTTKPKRYLVRPNQGVVAPSEDLPVSIVLLAHDKVGLISEFMQTGGCNETNKFMVQALPLQGESATAGAVPPGLW+EAKARVQQKKLVVHFTFPRPSIPPSSAETLKQASNGVRDAIAGDSSRSRFATG EDGLQGGAGGDGSDMSQDQMWAQAAELRRKYDDLVSFTINLTAEKDLIQRSLGATKEDLAREQQARKLLETKMMEPGARRPAGSV GSTSPSESRSGFSLFFVLIVAALALFAGQWTAANGYPLLLGS+S
Sbjct: 1 MAAQDALFALECLPSKVLDFALEDGAEPAECVLHLTNNGSESVAFKVKTTKPKRYLVRPNQGVVAPSEDLPVSIVLLAHDKVGLISEFMQTGGCNETNKFMVQALPLQGESATAGAVPPGLWKEAKARVQQKKLVVHFTFPRPSIPPSSAETLKQASNGVRDAIAGDSSRSRFATGTEDGLQGGAGGDGSDMSQDQMWAQAAELRRKYDDLVSFTINLTAEKDLIQRSLGATKEDLAREQQARKLLETKMMEPGARRPAGSVAGSTSPSESRSGFSLFFVLIVAALALFAGQWTAANGYPLLLGSES 307
BLAST of mRNA_Ecto-sp6_S_contig9.18112.1 vs. uniprot
Match: A0A6U6EE94_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6EE94_9STRA) HSP 1 Score: 125 bits (314), Expect = 7.830e-30 Identity = 108/328 (32.93%), Postives = 156/328 (47.56%), Query Frame = 1
Query: 25 ALECLPSKVLDFALEDGAE-----------PAECVLHLTNNG--SESVAFKVKTTKPKRYLVRPNQGVVAPSEDLPVSIVLLAHDKVGLISEFMQTGGC---NETNKFMVQALPLQGESAT--------------AGAVPPGLWEE---------------AKARVQQKKLVVHFTFPRPSIPPSSAETLKQASNGVRDAIAGDSSRSRFATGIEDGLQGGAGGDGSDMSQDQMWAQAAELRRKYDDLVSFTINLTAEKDLIQRSLGATKEDLAREQQARKLLETKMMEPGARRPAGSVVGSTSPSESRSGFSLFFVLIVAALALFAG 873
ALE P L F L AE + C + L + G SE +AFKVKTT+P+RYLVRPNQGVVAP+ VSI+L+ DK L+ + + G + +KF+VQ+ + + A+ +GA G+ +E + KKL V P+ S+ V GD S + + LQ + +M+ +QM+ + + LRRKYD+LVSF++NLTAE+D++ +L TK DL RE AR LE GA AG+ S+ +G S+ +L+VA + LFAG
Sbjct: 9 ALEVTPESALQFTLTRTAENSASASSSNEPTSRCTMTLRHTGGTSEHLAFKVKTTQPRRYLVRPNQGVVAPNSTETVSILLVERDKQILLHSYDRLGQSALDHSKDKFLVQSCAVTDDFASRYMDERSKAKKIDDSGAKASGMSKEMADSLTSMWNAVASGGSVPIFNKKLHVRHVVPK--------------SDNVTQRAVGDLSATAVSK-SPPALQETQKTNVENMTPEQMFTEISSLRRKYDELVSFSVNLTAERDILNNTLEQTKRDLNREMAARAALENS----GAGGGAGT---KHEKSKGATGLSILQILVVALVFLFAG 314
BLAST of mRNA_Ecto-sp6_S_contig9.18112.1 vs. uniprot
Match: A0A7S2RAX6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RAX6_9STRA) HSP 1 Score: 122 bits (306), Expect = 9.900e-29 Identity = 101/313 (32.27%), Postives = 150/313 (47.92%), Query Frame = 1
Query: 13 DALFALECLPSKVLDFALEDGA----------EPAECVLHLTNNGS--ESVAFKVKTTKPKRYLVRPNQGVVAPSEDLPVSIVLLAHDKVGLISEFMQTGGC---NETNKFMVQALPLQGESATAG-AVPPGLWEEAKARVQQKKLVVHFTFPRPSIPPSSAETLKQASNGVRDAIAGDSSRSRFATGIEDGLQGGAGGDGSDMSQDQMWAQAAELRRKYDDLVSFTINLTAEKDLIQRSLGATKEDLAREQQARKLLETKMMEPGARRPAGSVVGSTS---PSESRSGFSLFFVLIVAALALFAGQWTAANG 894
D +ALE P L F L G C + L + G E +AFKVKTT+P+RYLVRPNQGVVAP V+I+L+ DK L+ + + G + +KF+VQ+ + A+ + ++++ K+L T S + + V ++ S S L+ + +MS DQ++A+ + LRRKYD+LVSF++NLTAE+D++ +L TK DL RE A+ LE K ++G+ S P +S GFSLF V+ VA G A +G
Sbjct: 3 DTPYALEISPDSTLQFTLTRGTANDGRSTVGESTPRCTMSLRHPGKTKEHLAFKVKTTQPRRYLVRPNQGVVAPGTTEKVTILLVEKDKQILLQSYDRLGQTALDHSKDKFLVQSCTTPDDFASRYMSAKADSTDDSEGNRATKELAESLTTMWNSAAGGDLPIYNKKLH-VHHVVSPSDSASAKGGNAPQPLEEKPSME--NMSPDQIYAEVSSLRRKYDELVSFSVNLTAERDILNNTLEQTKRDLNRETMAKAALENK-----------GLIGARSKGVPKQSSRGFSLFSVIFVALTFTLLGIKGATSG 301
BLAST of mRNA_Ecto-sp6_S_contig9.18112.1 vs. uniprot
Match: A0A7S0UGK8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UGK8_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.320e-27 Identity = 89/246 (36.18%), Postives = 130/246 (52.85%), Query Frame = 1
Query: 40 PSKVLDFALEDGAEPAECVLHLTNNG--SESVAFKVKTTKPKRYLVRPNQGVVAPSEDLPVSIVLLAHDKVGLISEFM---QTGGCNETNKFMVQALPLQGESATAGAVPPGLWEEAKARVQQKKLVVHFTFPRPSIPPSSAET-LKQASNGVRDAIAGDSS----RSRFATGIEDGLQGGAGGDGSDMSQDQMWAQAAELRRKYDDLVSFTINLTAEKDLIQRSLGATKEDLAREQQARKLLETK 747
P L F+L C++ L + G +ES+AFKVKTT+P+RYLVRPNQG++AP +SI+L+ DK L+ + Q+G + +KF+VQ+ A AK Q +L T S+ + T L+ VR + DSS S A+ + L+ + + DMS DQ+ ++ + LRRKYD+LVSF++NLTAE+D++ +L TK D RE AR LE K
Sbjct: 10 PESELVFSLSPNEATPRCMMTLKHGGGSTESIAFKVKTTQPRRYLVRPNQGLIAPGTSETISILLVEKDKQVLLQNYDRLGQSGLDHSKDKFLVQSCAADSSLA------------AKKSGSQTELYDALTAMWNSVTSGGSSTPLQNKKLHVRHVV--DSSPAPATSDAASTPKPKLEAASHSNLGDMSADQISSELSNLRRKYDELVSFSVNLTAERDILSNTLEQTKRDYNREIAARSALENK 241
BLAST of mRNA_Ecto-sp6_S_contig9.18112.1 vs. uniprot
Match: A0A7S3LDL8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LDL8_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.450e-27 Identity = 96/306 (31.37%), Postives = 145/306 (47.39%), Query Frame = 1
Query: 28 LECLPSKVLDFALEDGAEPAECVLHLTNNGSE--SVAFKVKTTKPKRYLVRPNQGVVAPSEDLPVSIVLLAHDKVGLISEFMQTGGC---NETNKFMVQALPLQGESATAGAVPPGL---WEEAKARVQQKKLVVHFTFPRPSIPPSSAETLKQASNGVRDAIAGDSSRSRFATGIEDGLQGGAGGDGSDMSQDQMWAQAAELRRKYDDLVSFTINLTAEKDLIQRSLGATKEDLAREQQARKLLETKMMEPGARRPAGSVVGSTSPSES--RSGFSLFFVLIVAALALFAGQWTAANGYPLLLGS 915
+E P + F L G + V+ L + G SVAFKVKTT+P+RYLVRPNQG++ + V I+L+ DK L F++ G N +KF+VQ+ L+ + + GL W + + PS+PP S + L G I+ + S R T + GAG + + ++++KYD+LV+F++NLTAE+D++ +L TK DL R M + A+ +G G S + SGFS F VL+VA + AG ++ A G L S
Sbjct: 6 VEISPESEIKFELSSGEATPKAVITLKHPGGSAGSVAFKVKTTQPRRYLVRPNQGIITAGKTEEVQILLVEKDKNSLYQSFLRLGQAALDNCKDKFLVQSTFLRPSDSLSAGDYDGLTEFWTKLASNPND-----------PSLPPISNKKLTVIHTG----ISSEGSTERGGT-----VPAGAGAE----------TELEQMKKKYDELVAFSVNLTAERDVLNNTLEQTKRDLNRY----------MAKAAAKDNSGGAAGERSVGSTGGSSGFSFFTVLMVALIFWLAGCYSQAQGKASFLQS 271
BLAST of mRNA_Ecto-sp6_S_contig9.18112.1 vs. uniprot
Match: A0A7R9WSF8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WSF8_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.590e-26 Identity = 90/264 (34.09%), Postives = 137/264 (51.89%), Query Frame = 1
Query: 16 ALFALECLPSKVLDFALEDGAEPAECVLHLTNNG--SESVAFKVKTTKPKRYLVRPNQGVVAPSEDLPVSIVLLAHDKVGLISEFM---QTGGCNETNKFMVQAL--------PLQGESATAGAVPPGLW-----EEAKARVQQKKLVVHFTFP--RPSIPPSSAETLKQASNGVRDAIAGDSSRSRFATGIEDGLQGGAGGDGSDMSQDQMWAQAAELRRKYDDLVSFTINLTAEKDLIQRSLGATKEDLAREQQARKLLETK 747
+L +LE P LDF L + L L + G + +A+K+KTT+P+RYLVRPNQG++AP VSI+L+ DK L+ + QTG + +KF+VQ+ L +S +W ++++A V +K+ V P+ P + ++T+ A + R+A SS++ T MS DQ+ ++ LRRKYDDLVSF++NLTAE+D++ +L TK D REQ R LE+K
Sbjct: 3 SLNSLEITPDTYLDFNLAPNELTSRTTLTLRHPGHTDDHIAYKIKTTQPRRYLVRPNQGMIAPGGSDTVSILLIEKDKQILLQSYEKLGQTGLDHSKDKFLVQSCVVSSAFSSKLTKDSTELYEALTSMWNSVSNKDSQASVSHRKMHVRHQVVDNSPTSPANGSKTV--AKSFKREA----SSQANVDT----------------MSTDQLKSELTNLRRKYDDLVSFSMNLTAERDILSNTLEQTKRDYNREQATRSALESK 244
BLAST of mRNA_Ecto-sp6_S_contig9.18112.1 vs. uniprot
Match: K0R3I0_THAOC (MSP domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R3I0_THAOC) HSP 1 Score: 114 bits (286), Expect = 7.200e-26 Identity = 100/329 (30.40%), Postives = 157/329 (47.72%), Query Frame = 1
Query: 13 DALFALECLPSKVLDFAL----EDGAEPAECVLHLTN-----NGSESVAFKVKTTKPKRYLVRPNQGVVAPSEDLPVSIVLLAHDKVGLISEFMQTGGC---NETNKFMVQ--------ALPLQGESATAGA--------VPPGLWEEAKARVQQKKLVVHFTFPRPSIPPSSAETLKQASNGVRDAIAGDSSRSRFATGIEDGLQGGAGGDGSDMSQDQMWAQAAELRRKYDDLVSFTINLTAEKDLIQRSLGATKEDLAREQQARKLLETKMMEPGARRPAGSVVGSTSPSESRSGFSLFFVLIVAALA-LFAGQWTAANGYPLLLG 912
D +AL P L F L ++G + C++ LT+ G +AFKVKTT+P+RYLVRPNQG+VAP VSI+L+ D+ L + + + G + +KF+VQ A + ES G +W +A + + + + S+ S+ S G A A SS G+ G + MS DQ+ + + LRRKYD+LV+F++NLTAE+D++ +L TK DL RE R LE + ++ G+R +++ S G+SL +L+ A+ +F+ + T +L G
Sbjct: 3 DLPYALSISPDSALQFNLTPDADNGDGASRCIMTLTHPRKDGKGGGYLAFKVKTTQPRRYLVRPNQGIVAPGSSETVSILLVDKDRQQLRATYNRLGQSALDHSKDKFLVQSCAVPDDFAAQFKNESRGEGGQYKKELVDALTSMWNKATSGGSEISVFNKKLHVKHSVGGSAG------SGGTPAASA--SSPXSSGGGLPATFDSGKRNNADKMSPDQLQDEVSSLRRKYDELVAFSVNLTAERDILNNTLEQTKRDLNRESATRTALEKQGLKVGSR-------SASTRSGEAGGYSLKTLLLFVAMTFVFSVKGTNTGALKVLKG 316
BLAST of mRNA_Ecto-sp6_S_contig9.18112.1 vs. uniprot
Match: A0A1E7FVV3_9STRA (MSP domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVV3_9STRA) HSP 1 Score: 108 bits (270), Expect = 6.580e-24 Identity = 79/226 (34.96%), Postives = 117/226 (51.77%), Query Frame = 1
Query: 121 ESVAFKVKTTKPKRYLVRPNQGVVAPSEDLPVSIVLLAHDKVGLISEFM---QTGGCNETNKFMVQALPLQ--------GESATAGAVPPGLWEE-----AKARVQQKKLVV-HFTFPRPSIPPSSAETLKQASNGVRDAIAGDSSRSRFATGIEDGLQGGAGGDGSDMSQDQMWAQAAELRRKYDDLVSFTINLTAEKDLIQRSLGATKEDLAREQQARKLLETK 747
E +AFKVKTT+P+RYLVRPNQG++AP +SI+L+ DK L+ + Q+G + +KF+VQ+ + G +W + A +Q KKL V H PS+ +S + S GV + ++ + +E MS DQ+ ++ + LRRKYD+LVSF++NLTAE+D++ +L TK D RE AR LE K
Sbjct: 11 EFIAFKVKTTQPRRYLVRPNQGLIAPGTSETISILLVEKDKQALLQSYERLGQSGLDHSKDKFLVQSCTVDKTFAAKKLGSQTDLYDALTTMWNSVTSGGSSAALQNKKLHVRHIVSTSPSLAGTSNTS---GSKGVAPRL----ETTQHSNMVE-------------MSADQISSELSNLRRKYDELVSFSVNLTAERDILSNTLEQTKRDYNREMAARSALENK 216
BLAST of mRNA_Ecto-sp6_S_contig9.18112.1 vs. uniprot
Match: A0A1Z5K8X9_FISSO (Vesicle-associated membrane protein-associated protein A n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8X9_FISSO) HSP 1 Score: 107 bits (267), Expect = 1.760e-23 Identity = 90/298 (30.20%), Postives = 139/298 (46.64%), Query Frame = 1
Query: 28 LECLPSKVLDFALEDGAEPAECVLHLTNNGSES--VAFKVKTTKPKRYLVRPNQGVVAPSEDLPVSIVLLAHDKVGLISEFMQTGGCN---ETNKFMVQALPLQGESATAGAVP----PGLW-------EEAKARVQQKKLVVHFTFPRPSIPPSSAETLKQASNGVRDAIAGDSSRSRFATGIEDGLQGGAGGDGSDMSQDQMWAQAAELRRKYDDLVSFTINLTAEKDLIQRSLGATKEDLAREQQARKLLETKMMEPGARRPAGSVVGSTSPSESRSGFSLFFVLIVAALALFAG 873
L+ P L F L + + C L L + + S +AFKVKTT+P+RYLVRPNQG++ P V I+L+ +K L+ + + G +KF+VQ++ + S A LW + + V KKL V +G D G+SS SR IE+ ++QDQ A+ +RRKYD+LV+F++NLTAE+D++ +L TK DL RE L +T + + R + GS P+ +G + V +++ + F G
Sbjct: 13 LDLNPDSTLQFTLSNQEQSPSCSLELRHPDASSAPIAFKVKTTQPRRYLVRPNQGLIEPGGAQTVQILLVEKEKNSLLQSYERLGQPTLDQSKDKFLVQSVAILDASKLASLKDYDELTSLWATVGNSPSTSTSAVANKKLHVKHVV------------AGNKKSGSGDGAHGNSSISREP--IEN------------LTQDQAKAELTNMRRKYDELVAFSVNLTAERDMLNNTLEQTKRDLNRE-----LSKTAAQDNASGRGRAAGNGSAKPN---AGVTFVLVFLLSMASFFGG 276
BLAST of mRNA_Ecto-sp6_S_contig9.18112.1 vs. uniprot
Match: A0A7S4QY17_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QY17_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.860e-23 Identity = 104/329 (31.61%), Postives = 156/329 (47.42%), Query Frame = 1
Query: 22 FALECLPSKVLDFAL-EDGAEPAE----------CVLHLTNNGS--ESVAFKVKTTKPKRYLVRPNQGVVAPSEDLPVSIVLLAHDKVGLISEFMQTGGC---NETNKFMVQALPLQGESATAGAVPPGLWEEAKARVQQK--------KLVVHFT--FPRPSIPPSSA---------ETLKQASNGVRDAIAGDSSRSRFATGIEDGLQGGAGGDGSDMSQDQMWAQAAELRRKYDDLVSFTINLTAEKDLIQRSLGATKEDLAREQQARKLLETKMMEPGARRPAGSVVGSTSPSESRS---GFSLFFV-LIVAALALFAGQWTAAN 891
+ALE P L F L A AE C + L + G + +AFKVKTT+P+RYLVRPNQG+VAP+ VSI+L+ DK L+ + + G + +KF+VQ+ E A+ L+++ K +QK ++ T + + S S + + +G D A + T +E+ MS +QM+++ + LRRKYD+LV+F++NLTAE+D++ SL TK DL RE A+K L+ A + S S +R GFSL V ++V A+A F A N
Sbjct: 10 YALEVTPESALQFTLTRTPASAAENSSTDAGVTRCTMTLRHPGKTGQHLAFKVKTTQPRRYLVRPNQGIVAPNSTETVSILLVEKDKQILLQSYDRLGQSALDHSKDKFLVQSCAAPDEFAS-------LYDKEKRGDEQKSDGYKTSKEMAEKLTSLWDKTSTSGESPVFNKKLHVRHVVMEIKSGTPDPTAQVPTTRSDKTPVEN------------MSPEQMFSEVSSLRRKYDELVAFSVNLTAERDILNNSLEQTKRDLNREIAAKKTLQE----------AAGGASADSRSIARGDTGGFSLSVVQVMVIAIACFLAGIKACN 309 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18112.1 >prot_Ecto-sp6_S_contig9.18112.1 ID=prot_Ecto-sp6_S_contig9.18112.1|Name=mRNA_Ecto-sp6_S_contig9.18112.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=309bp MAAHDALFALECLPSKVLDFALEDGAEPAECVLHLTNNGSESVAFKVKTTback to top mRNA from alignment at Ecto-sp6_S_contig9:1055592..1065441+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18112.1 ID=mRNA_Ecto-sp6_S_contig9.18112.1|Name=mRNA_Ecto-sp6_S_contig9.18112.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9850bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1055592..1065441+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1055592..1065441+ >mRNA_Ecto-sp6_S_contig9.18112.1 ID=mRNA_Ecto-sp6_S_contig9.18112.1|Name=mRNA_Ecto-sp6_S_contig9.18112.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=927bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1055592..1065441+ (Ectocarpus species6 EcLAC_371)back to top |