mRNA_Ecto-sp6_S_contig9.18063.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18063.1
Unique NamemRNA_Ecto-sp6_S_contig9.18063.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18063.1 vs. uniprot
Match: A0A6H5KS36_9PHAE (Protein MCM10 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS36_9PHAE)

HSP 1 Score: 1171 bits (3030), Expect = 0.000e+0
Identity = 748/897 (83.39%), Postives = 760/897 (84.73%), Query Frame = 1 
Query:    1 MRDMDDEDMDLLDLFSGETRPSSSNCHLRERKKTEQ-KPQSRGPSASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------PPADFTEAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGGGGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTMPVNKTEGGGFCEFHVVAAFNRAQRKEPVGNKTKGNTQQPALSMSAKLGASVRQQXXXXXXXXRPSQSRAGLPSRSTMPGQRAQQGPPPRAAPASTLSSILGAGARRREGVGATRTFGSXXXXXXXXXXXXXXXXXXXXXXXXXXPSTVHAKALRPSAMRASGRTTMLSSPPPGLPGXXXXXXXXASRCGTTLPRPSSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRSGNRGAAGAATXXXXXXXXXXXXGGSEDLLKLPWAYGDGKKPNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVKGRGDEEGALGKDARPPKEAHPAGYMSGSVTVPAESQVFLQMPQRCPVRQDGTRSTEGEKMLADAQVLMKQRAIKEKADQRGLLLRPQDPNSASSIGKKSSGKPSGVRAGSNKRQAARPGANPLLAAGGRGGDGGDPLAKKVKTMSAVEKELLLRRVSKYAGLAEEERAKDADRSVQRLEQREAMADKAEEVTKMVVTVFACTQASCRIKIRCKTRRSRFNKRCRDLGHDQKGVKATLRFFECTNCRKRCSSTERVPRTGCESCGRHDMWKRCGARPGRGPAEGPRDKRFVAALSEWTDQRDLSLAAPDCR 2664
            MRDMDDEDMDLLDLFSGETRPSSSNCH RE K+TEQ KPQSRGPSASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        PPADFTEAFSGLRVRNRLLSAEDMRVRMRGRKVHRLD+LR VPPRALESQDPADAWAA+GVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGG GGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTMPVNKTEGGGFCEFHVVAAFNRAQRK PVGNKTKGNTQQPALSMSAKLGASVRQQXXXXXXXXRP QSRAGLPSRSTMPGQRAQQGPPPRAAPA TLSSILGAGARRREGVGATRTFGS XXXXXXXXX                PSTVHAKALRPSAMRASGRT            XXXXXXXX               XXXXXXXXX          XX          AG SGNRGA GAAT            GGSEDLLKLPWAYGDGKKPN+ XXXXXXXXXXXXXXXXX                              KV+GRGDEEGALGKDARPPKEAHPAGYMSGSV VPAES VFLQMPQRCPVRQDGTRS EGEKMLADAQVLM+QRA+K+KADQRGLLLRPQDPNSASSIGKKSSGKPSG+RAGSNKRQ+ARPGANPLLAAGGRGGD GDPLAKKVKTMSAVEKELLLRRVSKYAGLAEEERAKDADRSVQRLEQREAMADKAEEVTKM VTVFACTQA+      CKTRRSRFNK C+DLGHDQKGVKATLRFFECTNCRKRCSSTERVPRTGCESCGRHDMWKRCGARPGRGPAEGPRDKRFVAALSEWTDQRDLSLAAPDCR
Sbjct:    1 MRDMDDEDMDLLDLFSGETRPSSSNCHPRESKRTEQQKPQSRGPSASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKXXXXPPADFTEAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDSLRTVPPRALESQDPADAWAAVGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGDGGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTMPVNKTEGGGFCEFHVVAAFNRAQRKAPVGNKTKGNTQQPALSMSAKLGASVRQQXXXXXXXXRPFQSRAGLPSRSTMPGQRAQQGPPPRAAPAPTLSSILGAGARRREGVGATRTFGSSXXXXXXXXX----------------PSTVHAKALRPSAMRASGRTXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLLSKSVAAXXSAGRDGNGNGAGWSGNRGAVGAATAGAATAG-----GGSEDLLKLPWAYGDGKKPNNXXXXXXXXXXXXXXXXXXSGAPGPLSTGKKR-----------------KVEGRGDEEGALGKDARPPKEAHPAGYMSGSVAVPAESPVFLQMPQRCPVRQDGTRSAEGEKMLADAQVLMRQRALKQKADQRGLLLRPQDPNSASSIGKKSSGKPSGLRAGSNKRQSARPGANPLLAAGGRGGDSGDPLAKKVKTMSAVEKELLLRRVSKYAGLAEEERAKDADRSVQRLEQREAMADKAEEVTKMAVTVFACTQATAG----CKTRRSRFNKHCKDLGHDQKGVKATLRFFECTNCRKRCSSTERVPRTGCESCGRHDMWKRCGARPGRGPAEGPRDKRFVAALSEWTDQRDLSLAAPDCR 849
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18063.1 vs. uniprot
Match: D8LM23_ECTSI (Protein MCM10 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM23_ECTSI)

HSP 1 Score: 739 bits (1907), Expect = 5.740e-257
Identity = 449/774 (58.01%), Postives = 454/774 (58.66%), Query Frame = 1 
Query:  313 MRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGGGGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTMPVNKTEGGGFCEFHVVAAFNRAQRKEPVGNKTKGNTQQPALSMSAKLGASVRQQXXXXXXXXRPSQSRAGLPSRSTMPGQRAQQGPPPRAAPASTLSSILGAGARRREGVGATRTFGSXXXXXXXXXXXXXXXXXXXXXXXXXXPSTVHAKALRPSAMRASGRTTMLSSPPPGLPGXXXXXXXXASRCGTTLPRPSSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRSGNRGAAGAATXXXXXXXXXXXXGGSEDLLKLPWAYGDGKKPNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVKGRGDEEGALGKDARPPKEAHPAGYMSGSVTVPAESQVFLQMPQRCPVRQDGTRSTEGEKMLADAQVLMKQRAIKEKADQRGLLLRPQDPNSASSIGKKSSGKPSGVRAGSNKRQAARPGANPLLAAGGRGGDGGDPLAKKVKTMSAVEKELLLRRVSKYAGLAEEERAKDADRSVQRLEQREAMADKAEEVTKMVVTVFACTQASCRIKIRCKTRRSRFNKRCRDLGHDQKGVKATLRFFECTNCRKRCSSTERVPRTGCESCGRHDMWKRCGARPGRGPAEGPRDKRFVAALSEWTDQR 2634
            MRVRMRGRKVHRLDALRAVPPRALESQDPADAWAA+GVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGGGGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTMPVNKTEGGGFCEFHVVAAFNRAQRKEPVGNKTKGNTQQPALSMSAKLGAS                   GL S+S                                                                                                                                                                                                                                                                                             A + VFLQMPQRCPVRQDGTRS EGEKMLADAQVLMKQRAIKEKADQRGLLLRPQDPNSASSIGKKSS KPSG+RAGSNKRQAARPGANPLLAAGGRGGDGGDPLAKKVKTMSAVEKELLLRRVSKYAGLAEEERAKDADRSVQRLEQREAMADKAEEVTKMVVTVFACTQ        CKTRRSRFNKRCRDLGHDQKGVKATLRFFECTNCRKRCSSTERVPRTGCESCGRHDMWKRCGARPGRGPAEGPRDKRFVAALSE   +R
Sbjct:    1 MRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAVGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGGGGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTMPVNKTEGGGFCEFHVVAAFNRAQRKEPVGNKTKGNTQQPALSMSAKLGAS-------------------GLSSKS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAVFLQMPQRCPVRQDGTRSAEGEKMLADAQVLMKQRAIKEKADQRGLLLRPQDPNSASSIGKKSSDKPSGLRAGSNKRQAARPGANPLLAAGGRGGDGGDPLAKKVKTMSAVEKELLLRRVSKYAGLAEEERAKDADRSVQRLEQREAMADKAEEVTKMVVTVFACTQ--------CKTRRSRFNKRCRDLGHDQKGVKATLRFFECTNCRKRCSSTERVPRTGCESCGRHDMWKRCGARPGRGPAEGPRDKRFVAALSESGGER 462
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18063.1 vs. uniprot
Match: A0A835YRW3_9STRA (Protein MCM10 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRW3_9STRA)

HSP 1 Score: 137 bits (345), Expect = 6.460e-30
Identity = 87/234 (37.18%), Postives = 124/234 (52.99%), Query Frame = 1 
Query:  262 EAFSGLRVRNRLLSAEDMRVRMR-GRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGGGGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTMPVNKTEGGGFCEFHV-------------VAAFNRA------QRKEPVGNKTKGNTQQPALSMSAKLGASV 903
            E  SG+RV    L  E     +R G K  +LD L ++  +ALES DP  AWA +GVLV KS +R  ++G  F  W LS L+    E +L L ++AL SHW++CEG+++ ++GA  LP +       P  L F+ D+ WQV RIGMS DY +C G + +G  CT+ VNK+    +C +H              VA  +R+      Q++  V  +   N Q  AL   A LGA+ 
Sbjct:    2 ERLSGIRVNKPTLVDEPSLEALRQGYKFFKLDTLPSIARQALESTDPMHAWATVGVLVRKSQQRDTSSGKPFVKWGLSGLAAGSKESTLLLSKDALSSHWSICEGSVLMLLGAHALPKQEQSSAGDP--LVFAADASWQVVRIGMSSDYAVCGGTKANGARCTLAVNKSVSS-YCSYHASQGIPGKRGSKAGVAGTSRSGGGGGMQQQCRVLQRQGANVQHGALGCMASLGAAA 232
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18063.1 vs. uniprot
Match: A0A8B7YZI2_ACAPL (Protein MCM10 homolog n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YZI2_ACAPL)

HSP 1 Score: 131 bits (329), Expect = 2.910e-27
Identity = 73/215 (33.95%), Postives = 122/215 (56.74%), Query Frame = 1 
Query:  259 TEAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGGGGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTMPVNKTEGGGFCEFHVVAAFNRAQRKEPVGNKTKGNTQQPALSMSAKLGASV 903
            T  +S +R+ N L+S+  +   M GRK+ RL  L+    + L++      W  +GV+VSK P + ++ G +FS+W LSDLS  +  +++FLF +A  +HW   +G++I ++ A ++P K  G     + ++ S+D P ++  +G S D+G C+GKRKDGKPC+M VN      FC++HV + + +   K      + G  Q  A     KLG ++
Sbjct:  338 TNRYSQIRILNPLVSSARLDAMMEGRKMLRLSILQ----KYLDTGPNKGDWVTMGVIVSKLPPKTSSKGKTFSIWKLSDLSVCDQTITIFLFSKAHDNHWKTVQGSVIGLLNASIMPPKDNG---QDEGVSLSIDHPDKLLLLGTSKDFGHCRGKRKDGKPCSMVVNMAVSE-FCQYHVQSEYKKHSAKRSDLQSSYGGVQPKAFKK--KLGTNI 542
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18063.1 vs. uniprot
Match: A0A1Y1IAS4_KLENI (Protein MCM10 homolog n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAS4_KLENI)

HSP 1 Score: 129 bits (325), Expect = 1.150e-26
Identity = 71/197 (36.04%), Postives = 112/197 (56.85%), Query Frame = 1 
Query:  253 DFTEAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGGGGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTMPVNKTEGGGFCEFHVVAAFNRAQRKEPVGNK 843
            D  E  SGL+++N LL +  ++ R  G +  RL  + +    A +   PA  WA   VL  K   R++A+G  + +W ++DL+      SLFLF +A  +HW   EG+++ ++ AK   +KGG   +AP     S ++  QV ++G S D GLC+G RKDG PCTMP+NK+EG  +C++H   A+ + Q+ +    K
Sbjct:  106 DNVEPHSGLKIKNPLLPSIVVKERFAGSRFLRLSKISS----AFQGGTPASPWATAAVLSEKMTPRESASGRKYGLWKVTDLAGFT--CSLFLFGDAFEAHWKESEGSVVGLLNAKYKEEKGGARSSAP--FCLSAENGQQVFKLGTSADLGLCRGTRKDGMPCTMPINKSEGE-YCQYHAAGAYQKLQKLQKAQEK 293
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18063.1 vs. uniprot
Match: A0A4W3J4D2_CALMI (Protein MCM10 homolog n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3J4D2_CALMI)

HSP 1 Score: 125 bits (314), Expect = 6.710e-26
Identity = 70/191 (36.65%), Postives = 109/191 (57.07%), Query Frame = 1 
Query:  262 EAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRA-VPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGGGGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTMPVNKTEGGGFCEFHVVAAFNRAQRKEP 831
            + FSGLR+RN L+S+ +M  +M+ RK+ RL  LR+ +    LE+ D    W   GV+  K+  + ++NG +FS+W L+DL      +SLFLF      HW    GT+I ++ A  +  K G      + +  SVD P ++  +G +MD G C+ ++K+G+PCT  VN  E G +CE+HV A + +   K P
Sbjct:   42 DRFSGLRIRNPLVSSTEMERKMQSRKMIRLSQLRSKLATENLEATD----WVTFGVVCKKTTPQSSSNGKTFSIWRLTDLCSSSLNLSLFLFGNVHKEHWKTETGTVIGLLNANPMKPKEGS-----EEVCLSVDHPQKILVMGEAMDMGCCRARKKNGEPCTQIVNLRECG-YCEYHVKAQYKKLSAKRP 222
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18063.1 vs. uniprot
Match: A0A1X7VR66_AMPQE (Protein MCM10 homolog n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VR66_AMPQE)

HSP 1 Score: 125 bits (314), Expect = 1.130e-25
Identity = 76/196 (38.78%), Postives = 112/196 (57.14%), Query Frame = 1 
Query:  259 TEAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGGGGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTMPVNKTEGGGFCEFHVVAAF--NRAQRKEPVGN 840
            TE F+GLR++N L+S+E M+ RM GRK+ R+  +   P    E  D A  W   GVLV+K P +    G  FSVW LSDLS + + VSLFLF +A   HW    GT++A++  K+   +   G  +    + S+D+  ++  +G+S DY +C    K GK CT   NK + GG CE+H+   +  +R++R E  GN
Sbjct:  126 TERFTGLRIKNPLVSSELMKERMSGRKMIRIPQI--YPNIKKEDFDIAGDWVTGGVLVNKLPPKNTTKGSKFSVWKLSDLSSQNDVVSLFLFDKAFDVHWKTPIGTVVAILNPKIQNKQVNSGPGS--NFSLSLDNNNKLMILGVSFDYTVCSANTKSGKKCTNFANK-QYGGKCEYHLQGEYFKSRSKRMELQGN 316
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18063.1 vs. uniprot
Match: V9KEH6_CALMI (Protein MCM10 homolog (Fragment) n=3 Tax=Callorhinchus milii TaxID=7868 RepID=V9KEH6_CALMI)

HSP 1 Score: 125 bits (314), Expect = 1.460e-25
Identity = 70/191 (36.65%), Postives = 109/191 (57.07%), Query Frame = 1 
Query:  262 EAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRA-VPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGGGGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTMPVNKTEGGGFCEFHVVAAFNRAQRKEP 831
            + FSGLR+RN L+S+ +M  +M+ RK+ RL  LR+ +    LE+ D    W   GV+  K+  + ++NG +FS+W L+DL      +SLFLF      HW    GT+I ++ A  +  K G      + +  SVD P ++  +G +MD G C+ ++K+G+PCT  VN  E G +CE+HV A + +   K P
Sbjct:  228 DRFSGLRIRNPLVSSTEMERKMQSRKMIRLSQLRSKLATENLEATD----WVTFGVVCKKTTPQSSSNGKTFSIWRLTDLCSSSLNLSLFLFGNVHKEHWKTETGTVIGLLNANPMKPKEGS-----EEVCLSVDHPQKILVMGEAMDMGCCRARKKNGEPCTQIVNLRECG-YCEYHVKAQYKKLSAKRP 408
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18063.1 vs. uniprot
Match: UPI00077F8528 (protein MCM10 homolog isoform X1 n=3 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI00077F8528)

HSP 1 Score: 122 bits (306), Expect = 9.530e-25
Identity = 63/190 (33.16%), Postives = 111/190 (58.42%), Query Frame = 1 
Query:  256 FTEAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGGGGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTMPVNKTEGGGFCEFHVVAAFNRAQRK 825
            +T+++SG+R+ + L+S + M+ RM GR++ ++  ++      ++  D    W  +G+L+SK P + + +G +FS+W +SDL   E  V++FLF  A   HW +  GT+I  +   ++PD     GN    +  S+D   ++ ++G S D+G CKG+RKDG  CT+PVN ++   +C FHV   + +   K
Sbjct:  143 YTDSYSGIRIVDPLISFDMMQKRMEGRRLIKMSFIKNF----IKGGDIEGDWVTVGILISKLPPKTSKSGKNFSIWKMSDLHDCEKVVTMFLFGAAHAEHWKMTVGTVIGFLNPSLMPDNKDKNGN----MTLSIDHAGKLMQMGKSKDFGHCKGRRKDGTTCTVPVNVSQCE-YCVFHVKREYQKFSAK 323
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18063.1 vs. uniprot
Match: UPI000D1CC1AD (protein MCM10 homolog n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CC1AD)

HSP 1 Score: 119 bits (298), Expect = 1.060e-24
Identity = 73/193 (37.82%), Postives = 107/193 (55.44%), Query Frame = 1 
Query:  262 EAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGGGGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTMPVNKTEGGGFCEFHVVAAFNRAQRKEPVGN 840
            E  SGLR+RNR LS E +  ++   +  +L+AL+     A+       +WA I VL  K   R ++N  ++ +W LS L+  E+ VSLFLF +A   HW    G++IA+  AKV  D   G        + SV    Q+  +G S+D+ +C GKRKDG PC++PVN+ EG  +C+FH +AA    + K P  N
Sbjct:   96 EVHSGLRIRNRCLSREMLTTKLMELRFVKLEALK----HAVIGDGVRGSWATIAVLSDKGQPRVSSNSKNYVIWKLSCLN--ESTVSLFLFGDAYKEHWKEAVGSVIAIFDAKVRHDDKKGD------FSVSVADVNQLTVVGTSLDFAICNGKRKDGAPCSVPVNRKEGA-YCKFHALAARKNLRSKRPELN 275
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KS36_9PHAE0.000e+083.39Protein MCM10 homolog n=1 Tax=Ectocarpus sp. CCAP ... [more]
D8LM23_ECTSI5.740e-25758.01Protein MCM10 homolog n=1 Tax=Ectocarpus siliculos... [more]
A0A835YRW3_9STRA6.460e-3037.18Protein MCM10 homolog n=1 Tax=Tribonema minus TaxI... [more]
A0A8B7YZI2_ACAPL2.910e-2733.95Protein MCM10 homolog n=1 Tax=Acanthaster planci T... [more]
A0A1Y1IAS4_KLENI1.150e-2636.04Protein MCM10 homolog n=1 Tax=Klebsormidium nitens... [more]
A0A4W3J4D2_CALMI6.710e-2636.65Protein MCM10 homolog n=1 Tax=Callorhinchus milii ... [more]
A0A1X7VR66_AMPQE1.130e-2538.78Protein MCM10 homolog n=1 Tax=Amphimedon queenslan... [more]
V9KEH6_CALMI1.460e-2536.65Protein MCM10 homolog (Fragment) n=3 Tax=Callorhin... [more]
UPI00077F85289.530e-2533.16protein MCM10 homolog isoform X1 n=3 Tax=Parasteat... [more]
UPI000D1CC1AD1.060e-2437.82protein MCM10 homolog n=3 Tax=Selaginella moellend... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:681233..688510 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score746.9
Seed ortholog evalue1.1e-212
Seed eggNOG ortholog2880.D8LM23
Preferred nameMCM10
Model size3180
KEGG koko:K10736
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000724,GO:0000725,GO:0000727,GO:0000785,GO:0000790,GO:0001932,GO:0001934,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003697,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006270,GO:0006271,GO:0006275,GO:0006281,GO:0006302,GO:0006310,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010604,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016458,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0022616,GO:0030466,GO:0031298,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032774,GO:0032991,GO:0033554,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0035861,GO:0040029,GO:0042325,GO:0042327,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043596,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044877,GO:0045740,GO:0045814,GO:0045892,GO:0045934,GO:0045935,GO:0045937,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051338,GO:0051347,GO:0051716,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090329,GO:0090734,GO:0097159,GO:0097747,GO:0140098,GO:1900262,GO:1900264,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903932,GO:1903934,GO:1904931,GO:1990837,GO:2000105,GO:2000112,GO:2000113,GO:2000278,GO:2000573,GO:2001141
Exons9
EggNOG free text desc.DNA replication origin binding
EggNOG OGsKOG3056@1,KOG3056@2759
Ec32 ortholog descriptionReplication factor Mcm10
Ec32 orthologEc-14_002590.1
Cds size2667
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03032
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18063.1prot_Ecto-sp6_S_contig9.18063.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 681746..688510 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350523.1194131-UTR-Ecto-sp6_S_contig9:681232..6817451682350523.1194131-UTR-Ecto-sp6_S_contig9:681232..681745Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 681233..681745 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350523.1392138-CDS-Ecto-sp6_S_contig9:681745..6817931682350523.1392138-CDS-Ecto-sp6_S_contig9:681745..681793Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 681746..681793 -
1682350523.148109-CDS-Ecto-sp6_S_contig9:682537..6827891682350523.148109-CDS-Ecto-sp6_S_contig9:682537..682789Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 682538..682789 -
1682350523.1568782-CDS-Ecto-sp6_S_contig9:683206..6833441682350523.1568782-CDS-Ecto-sp6_S_contig9:683206..683344Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 683207..683344 -
1682350523.1653197-CDS-Ecto-sp6_S_contig9:683974..6840431682350523.1653197-CDS-Ecto-sp6_S_contig9:683974..684043Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 683975..684043 -
1682350523.1766884-CDS-Ecto-sp6_S_contig9:684453..6846841682350523.1766884-CDS-Ecto-sp6_S_contig9:684453..684684Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 684454..684684 -
1682350523.1847742-CDS-Ecto-sp6_S_contig9:685071..6860991682350523.1847742-CDS-Ecto-sp6_S_contig9:685071..686099Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 685072..686099 -
1682350523.193432-CDS-Ecto-sp6_S_contig9:686433..6866591682350523.193432-CDS-Ecto-sp6_S_contig9:686433..686659Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 686434..686659 -
1682350523.2026474-CDS-Ecto-sp6_S_contig9:687068..6876381682350523.2026474-CDS-Ecto-sp6_S_contig9:687068..687638Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 687069..687638 -
1682350523.212188-CDS-Ecto-sp6_S_contig9:688405..6885101682350523.212188-CDS-Ecto-sp6_S_contig9:688405..688510Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 688406..688510 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18063.1

>prot_Ecto-sp6_S_contig9.18063.1 ID=prot_Ecto-sp6_S_contig9.18063.1|Name=mRNA_Ecto-sp6_S_contig9.18063.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=889bp
MRDMDDEDMDLLDLFSGETRPSSSNCHLRERKKTEQKPQSRGPSASPPPP
TPPPPSTASATRTAVLPPSDDNKPRKPPPRRPPADFTEAFSGLRVRNRLL
SAEDMRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRR
QAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAK
VLPDKGGGGGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTM
PVNKTEGGGFCEFHVVAAFNRAQRKEPVGNKTKGNTQQPALSMSAKLGAS
VRQQQQQQQQQQRPSQSRAGLPSRSTMPGQRAQQGPPPRAAPASTLSSIL
GAGARRREGVGATRTFGSSSSSSSSSSSSSSRTGVGGGGGGGGGPSTVHA
KALRPSAMRASGRTTMLSSPPPGLPGGGGGGGGGASRCGTTLPRPSSSFS
SSPSSSAGLSSKSAAAAASAGRNGNGNGNGAGRSGNRGAAGAATAGAATA
GAATAGGGSEDLLKLPWAYGDGKKPNSSSSCSSSRSRSGSSAASGGGGQG
KAAAGGGGGGGGNGAPGPSSTGEKTKVKGRGDEEGALGKDARPPKEAHPA
GYMSGSVTVPAESQVFLQMPQRCPVRQDGTRSTEGEKMLADAQVLMKQRA
IKEKADQRGLLLRPQDPNSASSIGKKSSGKPSGVRAGSNKRQAARPGANP
LLAAGGRGGDGGDPLAKKVKTMSAVEKELLLRRVSKYAGLAEEERAKDAD
RSVQRLEQREAMADKAEEVTKMVVTVFACTQASCRIKIRCKTRRSRFNKR
CRDLGHDQKGVKATLRFFECTNCRKRCSSTERVPRTGCESCGRHDMWKRC
GARPGRGPAEGPRDKRFVAALSEWTDQRDLSLAAPDCR*
back to top

mRNA from alignment at Ecto-sp6_S_contig9:681233..688510-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18063.1 ID=mRNA_Ecto-sp6_S_contig9.18063.1|Name=mRNA_Ecto-sp6_S_contig9.18063.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7278bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:681233..688510- (Ectocarpus species6 EcLAC_371)
ATGAGAGACATGGACGATGAAGATATGGACCTGCTGGATCTATTCTCTGG
CGAGACAAGGCCATCTTCGTCGAATTGCCATCTTCGAGAGAGAAAAAAGA
CGGAGGTATGAGAACCCACTGCAGCAGGACAAAGCAGTAGTACCAACTGC
TGTTCTCGCAAGAGGCAGCATCAGCAGCCAGGATTCAACGCCATTACTGC
AACCATCCGTCGCAGCCACAAAAGTTACATGTCAGTTGATGACACAGGAG
GTAGTTTTTGTAAGTGCGTTCCACAACAGCTACACGCACCACCCTCAACG
TTTGCTGCCGTTTGCAGAGGAAGAATAGACTAGGGGGTCTCGAGTCGCAG
GTCGATTTGAACGCTTTCTTTCACGAACAGCAGACGAAGCCTACACAGCG
CAGTAGACTACTGCTGTGTCGACTACACATATCGACTTTCAAAATCCTCT
CTGCATTTTTCTCTTGCATAGCGGAAACAACTACTGCTGTAGATAGCAGA
ACACCTTTATGCGTTGATGAGAGTCGAGGATGTCGAATACTGGTATGGTA
TATTTTAGGGACAGATTTCTTACAACAGCATGTGGCGAGCTCTACAGGGC
ACAACAGCATCGGGGTTATGCTGAAAAATGGCCCGATTGCAAAGTTTCCC
CTGCTACAATATATCCACATCTCCTGGAATGTCTAATAGGGCATTATTAC
TGTAGACTGTGCACTTATCGAAGGCTGCGAAATCAACGAAGACGGTAACG
AGGTTTGGTGTGTGGGTACAAAATGTACAAGATCGATGCGTGTACGTGAC
CCTCTGGCGAACGATAACCCCGCCCTCTCTTCCGCCCCTCTCCCCCTTGC
TCCGCCGTTCCCCGTCAAGCAGCAAAAGCCGCAGTCGCGAGGACCCTCAG
CATCACCGCCTCCGCCTACACCACCACCACCCTCCACTGCCTCAGCCACC
CGCACGGCGGTTCTCCCTCCTTCCGACGACAACAAGCCCCGGAAGCCACC
GCCGCGGCGGCCACCGGCCGACTTCACGGAGGCCTTCTCCGGGCTGCGCG
TCAGGAACAGGCTCCTCTCCGCCGAGGACATGCGCGTCCGCATGAGGGGC
CGCAAGGTGCACCGCCTCGACGCCCTGCGGGCGGTCCCGCCGAGGGCCCT
CGAGAGCCAGGACCCGGCCGACGCGTGGGCGGCCATCGGCGTCCTCGTGT
CCAAGTCGCCCCGGCGGCAGGCCGCCAACGGCGGGAGTTTCTCCGTCTGG
ACGCTGAGCGACCTGTCCCGCAGGGAGAACGAAGTGTCCCTCTTCCTCTT
CCAGGAGGCGCTGGGCTCGCACTGGACCGTGTGCGAGGGGACGCTGATCG
CCGTGGTTGGCGCCAAGGTGTTGCCGGACAAGGGCGGCGGCGGCGGGAAC
GCTCCTCAGAGGCTGGCGTTCTCGGTGGACTCTCCCTGGCAGGTGGGGTG
CGGTGTCTCGACGGCGGGGGGGGCGTTGGGTGTGTGGTGTGTGTAGATAA
ATTCCACGAGGGGGTGTGGTTTTGCGAGCGCACGTGAAAGGCGAGGTGAA
ATCCAGCACATCGCCTACCTCCGCCGCAGAAATAGAGGTGCTGTCGCGTT
GAGAGCGCAGCTGTAAAATCCCCGAAGCAACAGGTCCAACGGTTGCTCAA
CAAGGGTGGAAAACCGTGTTTTCGCCACCGTTCAAACAATAGCAACAATT
ACGATTAACATATCATATGCCAGACATTTGTCGAGAAGTTTCCTGCTCGC
AGCATGCTATATATATATCCCGGCCGAAGACCTCTGAATGAGACGTCACA
GCAGTAAACACGCGACGTTTTGGTGCTTGTGAAAACGAATCGGCGAGCCA
GGTGAACAGGATAGGCATGTCGATGGACTATGGCCTCTGCAAGGGCAAGC
GGAAGGACGGCAAGCCGTGCACCATGCCCGTCAACAAGACGGAGGGAGGC
GGGTTCTGCGAGTTCCACGTCGTGGCGGCCTTCAACAGGGCGCAGCGCAA
GGAACCCGTGGGGAACAAAACCAAGGGGAACACTCAACAACCGGCACTCA
GCATGTCCGCGAAGCTTGGCGCATCAGGTAAACGTTGCGTCCGCGTGATG
GGTGCGCAAGGCTGCATGCAGCCAGCCACCCCGGTGCGCCAAGAGGGATC
TACTTAACTGCCAAGACTTGGAATCGAAATCTATTGGTGGCAATTATGTG
TAGAGGACCCGGCCTGCTGGGCCGAAGCGGCCGGCGCGATTCAGATTCGA
GTAGTGCCGTCCGTGTGCGGCAGTTGTTACCGCCGCGTCGTATCCAAAGA
GTTCGTGAAAAGAGTATCCCACCAGGCGTCGTTCGGAAAGTCCGCGTGGC
CTCACGTCCGAATGCCACCGCTGTTGCTTCGCGCTCGCCCTCTGCTTCCG
GGTCCCGAAAGTCCGTCAACAGCAACAACAACAACAACAACAACAACGCC
CCTCTCAAAGCCGCGCGGGCTTGCCATCGAGGTCGACTATGCCGGGGCAA
CGGGCGCAGCAAGGACCCCCGCCTCGAGCCGCGCCCGCATCCACCCTGTC
AAGCATCCTAGGGGCAGGGGCGAGAAGGAGAGAGGGAGTCGGAGCCACCC
GAACCTTCGGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGAACTGGAGTCGGCGGCGGCGGCGGCGGCGGCGGCGGCCCGTCGAC
CGTCCACGCTAAGGCCCTGCGCCCGTCGGCTATGCGCGCGTCCGGCCGCA
CGACGATGCTCTCTTCACCGCCTCCCGGTCTCCCAGGCGGCGGCGGCGGC
GGCGGCGGTGGTGCCAGCCGCTGCGGTACCACCCTGCCTCGTCCTTCTTC
TTCCTTCTCCTCCTCCCCGTCGTCGTCGGCAGGCCTCTCGAGCAAGTCGG
CGGCGGCGGCGGCAAGCGCTGGTCGCAATGGCAACGGCAACGGCAACGGC
GCCGGTCGGTCGGGTAACCGAGGGGCCGCCGGGGCGGCGACCGCAGGGGC
GGCGACCGCAGGGGCGGCGACCGCCGGGGGAGGCAGCGAGGACCTCCTGA
AGTTGCCGTGGGCATACGGCGACGGCAAGAAACCCAACAGCAGCAGCAGC
TGCAGCAGCAGCCGCAGCCGCAGCGGTAGTAGCGCCGCCTCTGGGGGCGG
CGGCCAAGGAAAGGCCGCAGCGGGCGGCGGTGGCGGCGGCGGCGGCAACG
GCGCGCCCGGGCCGTCTTCCACCGGGGAGAAGACGAAGGTTAAGGGGCGA
GGCGACGAGGAAGGCGCGCTAGGAAAAGACGCGAGGCCGCCCAAGGAGGC
GCACCCGGCGGGGTACATGAGCGGTTCGGTGACCGTGCCCGCGGAATCCC
AGGTGTTCCTGCAGATGCCTCAGAGGTGTCCCGTGCGCCAGGACGGGACC
AGATCGACCGAGGGCGAGAAGATGCTTGCCGACGCACAGGTTCGGTTCGG
TTCGGTTCGGTTCGTTTGTCGGTTTATTTTTTGAGTGCCTCCGCACCGGG
GCCAGCAGGCGATAGCATGTCCCGATGGCACAGCATGTCCCGACGGCACG
CCTCGTGTTGCGTTACCTGTCGGTGCGTGTTTACCTTAATCCGGGGGGGC
GGATGAGCGTCGTGGTGCTTCTTCTTCTGGTTCGTGTGTATTCTGGAACG
TTGAGGTAGTAGCTGCTTTTCCCCGAAGCAAGCAAGCCCCCGCCTCTTGT
GAAGGTTGTGAGCCTCGCCAAAAAAAAACGCCTCAAAAAATTGGCTTGTT
TAACGATCCCGCGACCCAATCCCGATTCACCGAGTGGGGGCTTGCGTCGT
TGCCCCATCGCCATCCTCACACGTAGGTGTTGATGAAGCAGCGCGCCATC
AAGGAAAAGGCAGACCAGCGAGGCCTGCTCCTTCGGCCCCAAGACCCAAA
CTCCGCGAGCAGCATCGGCAAGAAGAGCAGCGGCAAGCCGTCGGGGGTCC
GGGCCGGAAGCAACAAGCGCCAGGCGGCAAGACCTGGCGCGAACCCCCTT
CTCGCAGCAGGCGGCAGGGGCGGCGACGGCGGGGACCCGCTCGCCAAGAA
GGTCAAGGTGAGGTCGGACGAAAAGAGCTACTCCATACTGTGGGGTCGAC
GCGGATGGGAGGGGGAGGAGGGAAGTGGATGGCGAGGCAACACCGGTGTA
AGAAAAAGGCAGGGTGTTGACTGGAGATACCGATGCCGGCAAGGAGCCTA
CCGTGTTGTTGCATGTCGGTGCTACATAGGTTTTGCATTGGTGGGAGTGG
GATTCGCGGCATGGCAGAGACACCCTTCCCCGGCTTTCGCCCCCCACCGC
CACCGCCACCGCCACCTGAACGAAAGCAGCGGCAACAACAGTTACGAGGG
GAAACGGCCCTGACTCTCATTCTTCAAGTCTTTCCTGTCATTTCTCTCAT
ACCGTGTATGTACCATCCTGTCCTCCCATGTGCGACCCTTGCGTGAAAAA
TTCGATTCCCCACACAGACGATGAGCGCCGTGGAGAAGGAGCTGCTGTTG
AGACGGGTTTCCAAGTACGCGGGACTGGCGGAGGAGGTAGGGGACAGGGG
AGAGCGGGCTCGCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTAGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTTGCTTCGAGGTAGT
CCCTCCTCCAGGGGATGTTTCGTGTACCGTACGACTCTTGTCCAGAACAC
GACGATGGCCACACACACACACGTGCACGTGCAGCCCTTCCTTGCGCTCT
AACGTGCCGGCATGCTCTTTAGTGTGTAAGCCTTTGCTCTCTCTCTCTCT
CTCTCTCTCGCGTTTTTGCGCTTTTTCTTCGACGTGAGGTGTTTTGTGCT
ATAATAGGCGGCCAAGAAGTCTTGTGCGCCGCGTTCGCACGCGTGCCAGA
ACCTCACAACATGAACCTGTTATTTGGTGCGAACGAGAGGTCGGTTGTTT
GTCCGTTTCGCCTTGTTGCGATGGAGGCGTTTTTCTTTCTTTTTTTGTTG
TTTCCCGTCCCGTGACTGCAGCACGGACGACAAGAACCGTGGACCACGAT
TAATTTACTATGCTTGGTACACGAAGAAGATGGCAAGTGCTGATGAACAG
ATGCGGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGTTGGGGATGAT
GGTGCTGGCTGAGAAGGAGCGTGCGAAGGACGCAGACCGAAGCGTGCAGC
GGCTGGAGCAGCGAGAGGCCATGGCGGACAAGGCGGAAGAAGTCACCAAG
ATGGTCGTCACGGTCTTCGCGTGCACACAGGCGAGTTGTAGAATTAAGAT
TAGAGTTTTTTTCACACAGCCAGCAAGCACAGCCGCCGGGGTTCTCTTCC
AGTGAGACAAACACGGCATGCGTAGAAGTTTTGTCAGCTTGTTGTACAGC
TATCGCGTGTTTCGTGTTGAAAGGAAGTAAACCACGCTCGGGTTGTGCCG
AACTGGGCTTGTTTGCCGCTCGCTCGCTGCGAAAGCGGCCAAGGGGCCTT
TGCTAAACAGGGACCAGTCAAAGCCTCTCCACGCCCCCCATCTCGTTCTT
GGCATGTTAAAGTTTACCGGTAGTTCCCGCCCGTGTACGGTATTTTCCAA
CGGCCTCCCTTACTTTCGCCCCCCCGTCCCGTCCCGTCCCATCCCGTCCC
ATCCCGTCCCATCCCGTCCTCGTTTCCTCGCCTGCCCCGCGTGCCCGAAC
GCCTGGCAACACAACGCACAGTGCAAGACCAGACGCAGCCGGTTCAACAA
GCGCTGCAGGGACCTCGGGCACGACCAGAAGGGCGTCAAGGCCACGCTCC
GCTTCTTTGAGTGCACCAACTGCCGGAAGCGCTGCTCGAGCACCGAGCGC
GTGCCGCGGACCGGGTGCGAGAGCTGCGGCAGGCACGACATGTGGAAGCG
GTGCGGCGCCCGGCCTGGCCGAGGGCCCGCCGAAGGCCCGCGGGACAAGC
GGTTTGTGGCCGCCTTGTCGGAGGTGGGTGTCGCGGGTTGGTTGGGTATT
GGTCGTCGTGCGCTTAATGGTAGCCGGGATCTACTGCTGTTGGTGGCGGT
GGTGTTGCTGTGGCCCGGGATGTTGAGTCGCGTCATTCCTTTTTTCAGGC
ACTATCTCCCCAGATGTGTAGATAATAATCTTCGCGCATTCAAGTTGGAC
GTCGTTGCTGATGTTCTTTGCCACCGAAAATCCTGTTGCGTTTTTGCTCT
TGGCCTAGGATCATTGAATGAAAGTATTGGGTTTTGTATGAGGCCTCCAG
CTCTGAGGCCGGCGGTCACATGTAGATCACTGCCGGCGACGGCGCGAGTG
ACGGGGTCGCCCTCGTACTCGGCATCTGTCGTACTCGGTGTTCTCTCGTG
TTCGAGGTAGGCAGAAAAACAATGAGCGGCTGTCTGTATGAATATGTCAA
CATGTTCCTCCATTATTCGTGCCGAATTTGGATTCGTCTGTAGCCCAATT
ATACCACCTGTCTGTGTGGATTTGTGGCTACACTCGAAAGTTGGCGCTCC
TGCTGCACGGAGATACTCGATGAAACGATGACACGGTGCCCCCCCCCACG
GTGTTGGGGAGCATGCTTCACGGCAAGCCCATCAACACGAGAACGACCCC
CGGCAAACACCGTCTGTCTGTCTCACTGCCGCCCACCCTGCTCCCTCCCT
CCCTCCCTCCTCCTCCTGAACGCGCTGCTGTGCGCCCCAACGATGTAACG
AACCGAACGTGACACAGTGGACGGACCAAAGGGACCTCAGCCTCGCGGCG
CCGGATTGTCGATGACGCTTTCTACTACGGTTTTTGGCTGCTGTGTTCTT
GGCCGTGTTGCTTTTTCTGTTCTATCGACGTTCTGCGTTGCCAGAGCGGT
GGTGAGAGACTGGAGAGGAGATAGGGAGAGGGACAGAGAGAGGGGCGGGG
CCAATTGAGAAAGGTCGGGTACGTACCGAATTCATATGCACCTGACAACA
ACCATTCAGAGTCTTTGGCGTGATCGCCGGTTGTCCAGCAAGCGTTGTCA
TAAGACTCGTCGAGAAATCAGAGGCTCGGTCCTCTCACGTGTGGATGACA
GGTCTGTAATCTGAAACAGTAGGATCTATGCGGACGCATCCAACGTGTAG
GAAGAACCGACTAGTTCTGACTACCAGCGTTGTCGCAGAAAACCACCGCG
GATTCACGGATTTTCCACATGTGCCACTTGCTGGCCAGACAGTCGGACCA
ATACTACCGCCGTGGCACCTCCTCGCCCACTCTCTTTCTCTGGACCCTCT
CTCCTTGCCCCAACTAAGGGTGGGTGTG
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:681233..688510-

>mRNA_Ecto-sp6_S_contig9.18063.1 ID=mRNA_Ecto-sp6_S_contig9.18063.1|Name=mRNA_Ecto-sp6_S_contig9.18063.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2667bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:681233..688510- (Ectocarpus species6 EcLAC_371)
ATGAGAGACATGGACGATGAAGATATGGACCTGCTGGATCTATTCTCTGG
CGAGACAAGGCCATCTTCGTCGAATTGCCATCTTCGAGAGAGAAAAAAGA
CGGAGCAAAAGCCGCAGTCGCGAGGACCCTCAGCATCACCGCCTCCGCCT
ACACCACCACCACCCTCCACTGCCTCAGCCACCCGCACGGCGGTTCTCCC
TCCTTCCGACGACAACAAGCCCCGGAAGCCACCGCCGCGGCGGCCACCGG
CCGACTTCACGGAGGCCTTCTCCGGGCTGCGCGTCAGGAACAGGCTCCTC
TCCGCCGAGGACATGCGCGTCCGCATGAGGGGCCGCAAGGTGCACCGCCT
CGACGCCCTGCGGGCGGTCCCGCCGAGGGCCCTCGAGAGCCAGGACCCGG
CCGACGCGTGGGCGGCCATCGGCGTCCTCGTGTCCAAGTCGCCCCGGCGG
CAGGCCGCCAACGGCGGGAGTTTCTCCGTCTGGACGCTGAGCGACCTGTC
CCGCAGGGAGAACGAAGTGTCCCTCTTCCTCTTCCAGGAGGCGCTGGGCT
CGCACTGGACCGTGTGCGAGGGGACGCTGATCGCCGTGGTTGGCGCCAAG
GTGTTGCCGGACAAGGGCGGCGGCGGCGGGAACGCTCCTCAGAGGCTGGC
GTTCTCGGTGGACTCTCCCTGGCAGGTGAACAGGATAGGCATGTCGATGG
ACTATGGCCTCTGCAAGGGCAAGCGGAAGGACGGCAAGCCGTGCACCATG
CCCGTCAACAAGACGGAGGGAGGCGGGTTCTGCGAGTTCCACGTCGTGGC
GGCCTTCAACAGGGCGCAGCGCAAGGAACCCGTGGGGAACAAAACCAAGG
GGAACACTCAACAACCGGCACTCAGCATGTCCGCGAAGCTTGGCGCATCA
GTCCGTCAACAGCAACAACAACAACAACAACAACAACGCCCCTCTCAAAG
CCGCGCGGGCTTGCCATCGAGGTCGACTATGCCGGGGCAACGGGCGCAGC
AAGGACCCCCGCCTCGAGCCGCGCCCGCATCCACCCTGTCAAGCATCCTA
GGGGCAGGGGCGAGAAGGAGAGAGGGAGTCGGAGCCACCCGAACCTTCGG
GAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAACTG
GAGTCGGCGGCGGCGGCGGCGGCGGCGGCGGCCCGTCGACCGTCCACGCT
AAGGCCCTGCGCCCGTCGGCTATGCGCGCGTCCGGCCGCACGACGATGCT
CTCTTCACCGCCTCCCGGTCTCCCAGGCGGCGGCGGCGGCGGCGGCGGTG
GTGCCAGCCGCTGCGGTACCACCCTGCCTCGTCCTTCTTCTTCCTTCTCC
TCCTCCCCGTCGTCGTCGGCAGGCCTCTCGAGCAAGTCGGCGGCGGCGGC
GGCAAGCGCTGGTCGCAATGGCAACGGCAACGGCAACGGCGCCGGTCGGT
CGGGTAACCGAGGGGCCGCCGGGGCGGCGACCGCAGGGGCGGCGACCGCA
GGGGCGGCGACCGCCGGGGGAGGCAGCGAGGACCTCCTGAAGTTGCCGTG
GGCATACGGCGACGGCAAGAAACCCAACAGCAGCAGCAGCTGCAGCAGCA
GCCGCAGCCGCAGCGGTAGTAGCGCCGCCTCTGGGGGCGGCGGCCAAGGA
AAGGCCGCAGCGGGCGGCGGTGGCGGCGGCGGCGGCAACGGCGCGCCCGG
GCCGTCTTCCACCGGGGAGAAGACGAAGGTTAAGGGGCGAGGCGACGAGG
AAGGCGCGCTAGGAAAAGACGCGAGGCCGCCCAAGGAGGCGCACCCGGCG
GGGTACATGAGCGGTTCGGTGACCGTGCCCGCGGAATCCCAGGTGTTCCT
GCAGATGCCTCAGAGGTGTCCCGTGCGCCAGGACGGGACCAGATCGACCG
AGGGCGAGAAGATGCTTGCCGACGCACAGGTGTTGATGAAGCAGCGCGCC
ATCAAGGAAAAGGCAGACCAGCGAGGCCTGCTCCTTCGGCCCCAAGACCC
AAACTCCGCGAGCAGCATCGGCAAGAAGAGCAGCGGCAAGCCGTCGGGGG
TCCGGGCCGGAAGCAACAAGCGCCAGGCGGCAAGACCTGGCGCGAACCCC
CTTCTCGCAGCAGGCGGCAGGGGCGGCGACGGCGGGGACCCGCTCGCCAA
GAAGGTCAAGACGATGAGCGCCGTGGAGAAGGAGCTGCTGTTGAGACGGG
TTTCCAAGTACGCGGGACTGGCGGAGGAGGAGCGTGCGAAGGACGCAGAC
CGAAGCGTGCAGCGGCTGGAGCAGCGAGAGGCCATGGCGGACAAGGCGGA
AGAAGTCACCAAGATGGTCGTCACGGTCTTCGCGTGCACACAGGCGAGTT
GTAGAATTAAGATTAGATGCAAGACCAGACGCAGCCGGTTCAACAAGCGC
TGCAGGGACCTCGGGCACGACCAGAAGGGCGTCAAGGCCACGCTCCGCTT
CTTTGAGTGCACCAACTGCCGGAAGCGCTGCTCGAGCACCGAGCGCGTGC
CGCGGACCGGGTGCGAGAGCTGCGGCAGGCACGACATGTGGAAGCGGTGC
GGCGCCCGGCCTGGCCGAGGGCCCGCCGAAGGCCCGCGGGACAAGCGGTT
TGTGGCCGCCTTGTCGGAGTGGACGGACCAAAGGGACCTCAGCCTCGCGG
CGCCGGATTGTCGATGA
back to top