prot_Ecto-sp6_S_contig9.18036.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig9.18036.1
Unique Name	prot_Ecto-sp6_S_contig9.18036.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	828

Homology

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BLAST of mRNA_Ecto-sp6_S_contig9.18036.1 vs. uniprot
Match: D7G8F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F3_ECTSI)

HSP 1 Score: 580 bits (1496), Expect = 2.160e-200
Identity = 298/318 (93.71%), Postives = 302/318 (94.97%), Query Frame = 0

Query:  227 MEGALRALNVPLVAISCVDGEIPSALACWCRGSRDGGAADNSSESDTAVTGATTKRSPMEGSAHITIMDECYHPTQLSLSEKVRDALRGTGALYAVDSSCVYPVNTSGGGGTRTGVGAATGGVTGVLSPEEFRQAQDGCLPAVLADLTIRPRLPLTPQLQNQTFVGGGERAMLPPEFQLGARTTSSSAIAVDWDKLRKISARRFPGFGKPIPSELASSDKDLISIFGGGERVGAMALRQTVHLAVASTPDGQRSAGTGVGSSSHPDDNGRLPPPQGICARLESETAGLGFGGSLLHFLRLGSVSSLSVVQARLHSLLA 544
            MEG LRALNVPLVAISCVDGEIPSAL CWCRGSRDGGAADNSSESDTA TGATTKRSPMEGSAHITIMDECYHPTQLSLSEKVRDALRGTGALYAVDSSCVYPVNTSGGGGTR GVGAATGGVTGVLSPEEFRQ QDGCLPAVLADLTIRPRLPL PQLQNQTFVGGGERAMLP EFQLGA  T+SSAIAVDWDKLR+ISARRFPGFGKPIPSELASSDKDLISIFGGGERVG MALRQTVHLAVASTPDGQRSAGTGVGSSSH D NG LPPP+GIC RLESETAGLGFGGSLLHFLRLGSVSSLSVVQAR+H  LA
Sbjct:    1 MEGTLRALNVPLVAISCVDGEIPSALTCWCRGSRDGGAADNSSESDTAATGATTKRSPMEGSAHITIMDECYHPTQLSLSEKVRDALRGTGALYAVDSSCVYPVNTSGGGGTRAGVGAATGGVTGVLSPEEFRQTQDGCLPAVLADLTIRPRLPLKPQLQNQTFVGGGERAMLPREFQLGAGATASSAIAVDWDKLREISARRFPGFGKPIPSELASSDKDLISIFGGGERVGEMALRQTVHLAVASTPDGQRSAGTGVGSSSHTDGNGGLPPPEGICGRLESETAGLGFGGSLLHFLRLGSVSSLSVVQARIHRRLA 318

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BLAST of mRNA_Ecto-sp6_S_contig9.18036.1 vs. uniprot
Match: A0A6H5K9X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9X8_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 1.450e-90
Identity = 145/162 (89.51%), Postives = 149/162 (91.98%), Query Frame = 0

Query:  285 MEGSAHITIMDECYHPTQLSLSEKVRDALRGTGALYAVDSSCVYPVNTSGGGGTRTGVGAATGGVTGVLSPEEFRQAQDGCLPAVLADLTIRPRLPLTPQLQNQTFVGGGERAMLPPEFQLGARTTSSSAIAVDWDKLRKISARRFPGFGKPIPSELASSDK 446
            MEGSAHITIMDECYHPTQLSLSEK RDALRGTGALYAVDSSCVYPVNTSGGGG R GV AA G VTGVLSPE+FRQ QDGCLPAVLADLT+RPRLPL PQLQ Q FVGGGERAMLP EFQLGA  T+SSAIAVDWDKLR+ISARRFPGFGKPIPSELASSDK
Sbjct:    1 MEGSAHITIMDECYHPTQLSLSEKARDALRGTGALYAVDSSCVYPVNTSGGGGARAGVAAAMGSVTGVLSPEDFRQTQDGCLPAVLADLTMRPRLPLKPQLQKQMFVGGGERAMLPREFQLGAGATASSAIAVDWDKLREISARRFPGFGKPIPSELASSDK 162

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig9.18036.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig9.18036.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G8F3_ECTSI	2.160e-200	93.71	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K9X8_9PHAE	1.450e-90	89.51	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 130..324 e-value: 1.4E-11 score: 46.2
None	No IPR available	GENE3D	1.10.579.10		coord: 631..731 e-value: 1.6E-6 score: 30.0
IPR006050	DNA photolyase, N-terminal	PROSITE	PS51645	PHR_CRY_ALPHA_BETA	coord: 149..330 score: 11.37
IPR036155	Cryptochrome/photolyase, N-terminal domain superfamily	SUPERFAMILY	52425	Cryptochrome/photolyase, N-terminal domain	coord: 150..243

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig9	contig	Ecto-sp6_S_contig9:467832..475126 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig9.18036.1	mRNA_Ecto-sp6_S_contig9.18036.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig9 467414..475126 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18036.1 ID=prot_Ecto-sp6_S_contig9.18036.1|Name=mRNA_Ecto-sp6_S_contig9.18036.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=828bp
MEEDAAAVAPAPGNSSARAGVAGGGATAASVVASFLKRGSTVPLQPDGRA
AMSPAGVPSVSPPTPKTPTPLASLITGIPSGSGGSSGEWRREEDSGAPNR
GAPVAAGAENRIQSSQRGGNRYFHNDWPRILKKRRRILHYPKPSEPDGSR
ILYWVRGNYRVKDNLALSVALWLSTELQLPLQAVTFVDPAIGRSAPLSSG
AGGAQRDAARQEVAFRTTVEASALCEMEGALRALNVPLVAISCVDGEIPS
ALACWCRGSRDGGAADNSSESDTAVTGATTKRSPMEGSAHITIMDECYHP
TQLSLSEKVRDALRGTGALYAVDSSCVYPVNTSGGGGTRTGVGAATGGVT
GVLSPEEFRQAQDGCLPAVLADLTIRPRLPLTPQLQNQTFVGGGERAMLP
PEFQLGARTTSSSAIAVDWDKLRKISARRFPGFGKPIPSELASSDKDLIS
IFGGGERVGAMALRQTVHLAVASTPDGQRSAGTGVGSSSHPDDNGRLPPP
QGICARLESETAGLGFGGSLLHFLRLGSVSSLSVVQARLHSLLAALFERV
HCSGAGGKHVEGLASKLCEPQRRLLDEVLRREYTLYRARFYHRGLGRAPH
PSVVPGPTTPGGSSQVAAKRHEGRGEGSWMGIVPAWVWEELRKGQLDARK
KQHNPEEMRLAGSTEPSSVHDRVFSAIQARLTTGARLHPSLAPYWARAVV
KMMLVPSQAISLLIHLAEEFCLGAAHAGDVVPDLLDSAFGVLREPPPRPT
ITSGGPPAVAARASSPGRAVAETRREMSVFRRLYHPSLATEEGLRSAFGG
EEALARFLTAKVPPPPPTSYSPPGTLA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014729	Rossmann-like_a/b/a_fold
IPR006050	DNA_photolyase_N
IPR036155	Crypto/Photolyase_N_sf