prot_Ecto-sp6_S_contig9.18021.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18021.1
Unique Nameprot_Ecto-sp6_S_contig9.18021.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length238
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18021.1 vs. uniprot
Match: A0A6H5JJ70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ70_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 5.050e-44
Identity = 80/88 (90.91%), Postives = 83/88 (94.32%), Query Frame = 0
Query:   54 MLVEAECADGLEGILSSNEEACCIVACGMCGGSGCSDVDGTNGGSDCCVDDILDSDVTCGVDDGVAPCIVDPDIITTPSAAEAATPAP 141
            MLVEAEC  G+EGILSSNEE CCI ACGMCGGSGCSDV+GT+GGSDCCVDDILDSDVTCGVDDGVAPCIVDPDIITTPSA EAATPAP
Sbjct:    1 MLVEAECVAGVEGILSSNEEVCCIAACGMCGGSGCSDVEGTDGGSDCCVDDILDSDVTCGVDDGVAPCIVDPDIITTPSATEAATPAP 88          
BLAST of mRNA_Ecto-sp6_S_contig9.18021.1 vs. uniprot
Match: D7G8G7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G7_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 4.930e-23
Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 0
Query:   82 MCGGSGCSDVDGTNGGSDCCVDDILDSDVTCGVDDGVAPCIVDPDIITTPSAAEAATPA 140
            MCGGSGCSDVDGT G S+CCVD ILDSDVTCGVDDGVAPCIVDPDIITTPSAAEAATPA
Sbjct:    1 MCGGSGCSDVDGTRG-SECCVDHILDSDVTCGVDDGVAPCIVDPDIITTPSAAEAATPA 58          
BLAST of mRNA_Ecto-sp6_S_contig9.18021.1 vs. uniprot
Match: D7FHN6_ECTSI (Glycin-rich protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN6_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 9.810e-6
Identity = 31/72 (43.06%), Postives = 42/72 (58.33%), Query Frame = 0
Query:   60 CADGLEGILSSNEEACCIVACGMCGGSGCSDVDGTNGGSDCCVDDILDSDVTCGVDDGVAPCIVDPDIITTP 131
            C++G+ GI S N +ACC +ACG CGG GCS   G  G  DCC  +I++    C    G +PC +D D +  P
Sbjct:  698 CSNGVYGIESPNGKACCALACGSCGGVGCSRRPG--GSYDCCESEIVEEGEACAAT-GASPCYIDGDEVLDP 766          
BLAST of mRNA_Ecto-sp6_S_contig9.18021.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 2.450e-5
Identity = 35/89 (39.33%), Postives = 49/89 (55.06%), Query Frame = 0
Query:   53 SMLVEAECADGLEGILSSNEEACCIVACGMCGGSGCSDV--DGTNGGSDCCVDDILDSDVTCGVDDGVAPCIVDPDIITTPSAAEAATP 139
            SM   + C++G+ GI +S + ACC+ ACG CGG GCS V  D   G  +CC   +LD++  CG     APC++  D      + E A P
Sbjct: 1396 SMPTTSTCSNGVPGIETS-KGACCVAACGQCGGDGCSTVASDLELGSDECCETAVLDANRPCGE----APCVIGGDFPAPTPSPETAAP 1479          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JJ70_9PHAE5.050e-4490.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8G7_ECTSI4.930e-2393.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHN6_ECTSI9.810e-643.06Glycin-rich protein n=1 Tax=Ectocarpus siliculosus... [more]
D7FRE8_ECTSI2.450e-539.33EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:341661..352523 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18021.1mRNA_Ecto-sp6_S_contig9.18021.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 338642..352602 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18021.1 ID=prot_Ecto-sp6_S_contig9.18021.1|Name=mRNA_Ecto-sp6_S_contig9.18021.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=238bp
MKPKATTARCRGHRGGGGGRGRSGGGGVRGVAGRLPRLVALLAVALAWWP
PSSMLVEAECADGLEGILSSNEEACCIVACGMCGGSGCSDVDGTNGGSDC
CVDDILDSDVTCGVDDGVAPCIVDPDIITTPSAAEAATPAPTAVEAPTAV
EGATPAPAAPAAGTATPSFTTTAPAAPAAGTATPSFTTTAPTATANGDVH
DDARPQRRRRPLRRRRRLRRLRRLLLSRRAAPRRRKA*
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