mRNA_Ecto-sp6_S_contig89.17982.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig89.17982.1 vs. uniprot
Match: D7G266_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G266_ECTSI) HSP 1 Score: 1179 bits (3050), Expect = 0.000e+0 Identity = 590/615 (95.93%), Postives = 600/615 (97.56%), Query Frame = 1
Query: 1 MIGDVIASIDLGTSRSAYAYTVEGRDEIILGVPGRLNESKVSVERKTATAILLKRAPKKSGGWCMVAFGDGAEQEYLEARMVGGAAESDLALFKNFKMELFKGGRKGTKRSSVDDAEGISEDQKTRLPLIYVVSLALEYIKDVVVDRLNKVDSHTLKASDIRWVLTVPAIWSSFGTTFMRTAALRAGLIQQENDMEHLRLCLEPEAACLTVENHHRNVHKWENGMKVMVLDCGGGTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIKELLRCPDEQWARLDKSTEMFELMADWEAKKTDHYPGKKVWISVAGMLDLVGMSVKDCEASRKQFNETSTVRLKTGLRASAKAEGMGRKISLTPELVSTFFKEAMVEITKATQTVLARQPEISVVYMVGGFSASPLLQEHVTAALQQPGLRVEVVERPGLAIVLGAARYGTSDSTIVSRKARLTYGTKTMTDYDEHNPEHTKRMKHARYIGGALYLDTFSCYVEKGIDLPVGTDKEETFYPLTNEQTAVSFDVCISLKPKAGIKYLKDNGVDKQLSLLKTVSAPMDMSVPMGKRGVSMQLSFGGTELGIKCTRCSDGHEVITSTVFVEDIEDTRFEPRC 1845
MIGDVIA+IDLGTSRSAYAYTV GRD+IILGVPGRLNESKVSVERKTATAILLKRAPKKSGGWCMV FGDGAEQEYLEAR GG AESDLALFK FKMELFKGGRKGTKRSSVDDAEGISEDQKTRLPLIYVVSLALEYIKDVV++RLNK DSHTLKA DIRWVLTVPAIWSSFGTTFMRTAALRAGLIQ+ENDMEHLRLCLEPEAACLTVE+HHRNVHKWENGMKVMVLDCGGGTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIKELLRC DEQWARLDKSTEMFELMADWEAKKTDHYPGK VWIS+AGMLDLVGMSVKDCEASRKQFNETSTVRLKTG RA AKAEGMGR++SLTPELVS FFKEAMVEI KATQTVLARQPEISVVYMVGGFSASPLLQEHVTAA+QQPGLRVEVVERPGLAIVLGAARYGTSDSTIVSRKARLTYGTKTMTDYDEHNPEHTKRMKHARYIGGALYLDTFSCYVEKGIDLPVGTDKEETFYPLTNEQTAVSFDVCISLKPKAGIKYLKDNGVDKQLSLLKTVSAPMDMSVPM KRGVSMQLSFGGTELGIKCTRCSDGHEVITSTVFVEDIEDTRFEPRC
Sbjct: 1 MIGDVIAAIDLGTSRSAYAYTVTGRDDIILGVPGRLNESKVSVERKTATAILLKRAPKKSGGWCMVTFGDGAEQEYLEARTKGGEAESDLALFKYFKMELFKGGRKGTKRSSVDDAEGISEDQKTRLPLIYVVSLALEYIKDVVINRLNKADSHTLKAFDIRWVLTVPAIWSSFGTTFMRTAALRAGLIQRENDMEHLRLCLEPEAACLTVEHHHRNVHKWENGMKVMVLDCGGGTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIKELLRCTDEQWARLDKSTEMFELMADWEAKKTDHYPGKNVWISIAGMLDLVGMSVKDCEASRKQFNETSTVRLKTGSRAPAKAEGMGRRVSLTPELVSNFFKEAMVEIIKATQTVLARQPEISVVYMVGGFSASPLLQEHVTAAVQQPGLRVEVVERPGLAIVLGAARYGTSDSTIVSRKARLTYGTKTMTDYDEHNPEHTKRMKHARYIGGALYLDTFSCYVEKGIDLPVGTDKEETFYPLTNEQTAVSFDVCISLKPKAGIKYLKDNGVDKQLSLLKTVSAPMDMSVPMRKRGVSMQLSFGGTELGIKCTRCSDGHEVITSTVFVEDIEDTRFEPRC 615
BLAST of mRNA_Ecto-sp6_S_contig89.17982.1 vs. uniprot
Match: A0A6H5K4X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4X7_9PHAE) HSP 1 Score: 479 bits (1234), Expect = 1.580e-164 Identity = 232/277 (83.75%), Postives = 252/277 (90.97%), Query Frame = 1
Query: 1 MIGDVIASIDLGTSRSAYAYTVEGRDEIILGVPGRLNESKVSVERKTATAILLKRAPKKSGGWCMVAFGDGAEQEYLEARMVGGAAESDLALFKNFKMELFKGGRKGTKRSSVDDAEGISEDQKTRLPLIYVVSLALEYIKDVVVDRLNKVDSHTLKASDIRWVLTVPAIWSSFGTTFMRTAALRAGLIQQENDMEHLRLCLEPEAACLTVENHHRNVHKWENGMKVMVLDCGGGTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIK 831
MIGDVIA+IDLGTSRSAYAYTV GRDEIILGVPGRLNESKV+VERKTATA+LL+R+ + GGWCMV FGDGAEQEYL+AR G A +LALFK FKMELFKGGR GTKRSS+DDAEGISED+KTRLPL+YVVSLALEYIKDV+++RLN DSHTL+ASDIRWVLTVPAIWSSFG FMR+AALRAGLIQ ENDMEHLRLCLEPEAACLTVE+HH N+ KWE GMKVMVLDCGGGT+DITTHHVV +PLGLEELEEP GGPWGSTTAD KFKLFIK
Sbjct: 1 MIGDVIAAIDLGTSRSAYAYTVVGRDEIILGVPGRLNESKVAVERKTATAVLLRRSSENRGGWCMVTFGDGAEQEYLDARNGDGEAAGNLALFKYFKMELFKGGRNGTKRSSIDDAEGISEDEKTRLPLVYVVSLALEYIKDVIINRLNNADSHTLRASDIRWVLTVPAIWSSFGKAFMRSAALRAGLIQDENDMEHLRLCLEPEAACLTVEHHHHNIRKWETGMKVMVLDCGGGTVDITTHHVVRMDPLGLEELEEPTGGPWGSTTADTKFKLFIK 277
BLAST of mRNA_Ecto-sp6_S_contig89.17982.1 vs. uniprot
Match: D7FNB5_ECTSI (Heat shock protein 70-putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB5_ECTSI) HSP 1 Score: 449 bits (1155), Expect = 2.720e-147 Identity = 266/624 (42.63%), Postives = 379/624 (60.74%), Query Frame = 1
Query: 7 GDVIASIDLGTSRSAYAYTVEGRDEIILGVPGRLNESKVSVERKTATAILLKRAPKKS--GGWCMVAFGDGAEQEYLEARMVGGAAESD-----LALFKNFKMELFKGGRKGTKRSSVDDAEGISEDQKTRLPLIYVVSLALEYIKDVVVDRLNKVDSHTLKASDIRWVLTVPAIWSSFGTTFMRTAALRAGLIQQENDMEHLRLCLEPEAACLTVENHHRNVHKWENGMKVMVLDCGGGTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIKELLRCPDEQWARLDKSTEMFELMADWEAKKTDHYPGKKVWISVAGMLDLVGMSVKDCEASRKQFNETSTVRLKTGLRASAKAEGMGRKISLTPELVSTFFKEAMVEITKATQTVLARQP--EISVVYMVGGFSASPLLQEHVTAALQQPG--LRVEVVERPGLAIVLGAARYGTSDS-TIVSRKARLTYGTKTMTDYDEHNPEHTKRMKHARYIG-GALYLDTFSCYVEKGIDLPVGTDKEETFYPLTNEQTAVSFDVCISLKPKAGIKYLKDNGVDKQLSLLKTVSAPMDMSVPMGKRGVSMQLSFGGTELGIKCTRCSDGHEVITSTV-FVEDIEDTRFE 1836
GD++A+IDLGTSR+AYAYTV GR+ I LGVP ++ + +VERKT TA+L++R + GGW + FGD AE++YL A+ A E+D L LFK FKMEL++GGR+ R VD+ + + LP+I+VVS A+EYIK+ ++DR++ + + + WV+TVPAIWS+FG FMR A+ RAGLI ENDM+ L+LCLEPEAACL VE+ ++ V W G K+MVLDCGGGTIDIT+H V S++PL L EL EP GG WGS+ D +FK F++E RL+ + E+F + +WE +KT G + +S+ + DL+ +S ++ E RK N+ L G G R + L P LV +FF+ A+ I T L+ ++ +YMVGGF ASPLLQ+ + PG L+V V RPGLA+V GAA +G + VSRKARLTYG + +D ++PEH R + A +G G+ L F VEKG D+PVG E+ P+ Q V + ++ + + YLKD GV Q + +V P+D +VP+ +RGV +++ FGGTE+ + C + DG +++ + V F+ED + E
Sbjct: 4 GDIVAAIDLGTSRTAYAYTVVGREHIWLGVPDSPDDDR-NVERKTLTAVLMQRCDEDEAEGGWRVAGFGDTAEEDYLTAK----ADEADEDRGSLVLFKFFKMELYQGGREQRARMDVDEPTAKAVGGEV-LPMIFVVSKAIEYIKNQILDRVSMIAQED--DARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDTRFKAFLQEFFDNASGGMTRLEGTHELFAVTVEWERQKTRLARGASLRVSIGDIADLLELSPREIEELRKFHNDPKPKELHVG--------GTRRNLVLPPALVESFFRGAITAIKDEVGTQLSTPDLHDLCYIYMVGGFCASPLLQDAIREEFDDPGRDLKVVVAPRPGLAVVTGAALFGARGTGAFVSRKARLTYGVRGSRRFDHNDPEHVCREEQAVVLGDGSRVLHYFRPVVEKGGDVPVGHVVEKPLVPMHEAQVFVGLHLLVTRQE--AVLYLKDVGVLVQE--IASVRVPVDHAVPLRERGVEVRMEFGGTEIAVSCYKQHDGDKLLDAKVDFLEDFDPGALE 607
BLAST of mRNA_Ecto-sp6_S_contig89.17982.1 vs. uniprot
Match: A0A6H5K023_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K023_9PHAE) HSP 1 Score: 408 bits (1049), Expect = 6.510e-137 Identity = 203/251 (80.88%), Postives = 226/251 (90.04%), Query Frame = 1
Query: 1084 MGRKISLTPELVSTFFKEAMVEITKATQTVLARQPEISVVYMVGGFSASPLLQEHVTAALQQPGLRVEVVERPGLAIVLGAARYGTSDSTIVSRKARLTYGTKTMTDYDEHNPEHTKRMKHARYIGGALYLDTFSCYVEKGIDLPVGTDKEETFYPLTNEQTAVSFDVCISLKPKAGIKYLKDNGVDKQLSLLKTVSAPMDMSVPMGKRGVSMQLSFGGTELGIKCTRCSDGHEVITSTVFVEDIEDTRFE 1836
MGRK+SLTPELVS+FF+EAMVEI KA +TVLARQPEISVVYMVGGFSASPLLQE VT+A+Q+PGLRVE +ERPGLAIVLGAARYG SDSTIVSRKARLTYGTK +T YDE+N +HT R HAR++G LYLD FSCYVEKG DLPVGTDKE TF+P+T+EQ VSFDVCISLKP+A I+YLKDNGV K+LSLLKTVSAP+D +VPM KRGVSM+LSFGGTELGIKCTRCSD HEV+T T FVEDIEDTRFE
Sbjct: 1 MGRKVSLTPELVSSFFEEAMVEIVKAAETVLARQPEISVVYMVGGFSASPLLQERVTSAVQKPGLRVETLERPGLAIVLGAARYGASDSTIVSRKARLTYGTKYVTRYDENNKKHTDRQAHARFVGDGLYLDKFSCYVEKGTDLPVGTDKEHTFHPVTDEQDQVSFDVCISLKPEADIEYLKDNGVSKKLSLLKTVSAPIDRNVPMSKRGVSMKLSFGGTELGIKCTRCSDSHEVVTQTKFVEDIEDTRFE 251
BLAST of mRNA_Ecto-sp6_S_contig89.17982.1 vs. uniprot
Match: A0A6H5KMC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMC0_9PHAE) HSP 1 Score: 332 bits (850), Expect = 4.590e-106 Identity = 165/258 (63.95%), Postives = 208/258 (80.62%), Query Frame = 1
Query: 1060 RASAKAEGMGRKISLTPELVSTFFKEAMVEITKATQTVLARQPEISVVYMVGGFSASPLLQEHVTAALQQPGLRVEVVERPGLAIVLGAARYGTSDSTIVSRKARLTYGTKTMTDYDEHNPEHTKRMKHARYIGGALYLDTFSCYVEKGIDLPVGTDKEETFYPLTNEQTAVSFDVCISLKPKAGIKYLKDNGVDKQLSLLKTVSAPMDMSVPMGKRGVSMQLSFGGTELGIKCTRCSDGHEVITSTVFVEDIEDTRF 1833
R+SA A G ISLT EL+++FF+EAMVEI + + VLA QP+ISVVYMVGGFSASPLLQ HVT ALQ P RV+VVE+PG+A+ +GAA +G S+S IV+RKARLTYGT+++T YDE +P HT+R ARYIGG LYL+ FSCYVEKG+DLPVGT ++ TF+P+T Q + FDVCISL+ A I+Y+KD GV+ +L LKT++ P+DMSV + +RGV M+L FGGT+LGIKCTRC+DGHEV +TVFVEDIEDTR+
Sbjct: 54 RSSASA-GTEFLISLTMELLNSFFQEAMVEIVEEAKKVLASQPQISVVYMVGGFSASPLLQGHVTDALQTPSCRVQVVEKPGVALAVGAALFGRSESAIVARKARLTYGTRSVTRYDEEDPNHTRRKGQARYIGGTLYLEKFSCYVEKGVDLPVGTGRQHTFHPVTERQNEIEFDVCISLQTAADIEYVKDEGVNHKLCTLKTLTVPVDMSVRLSERGVVMKLYFGGTDLGIKCTRCTDGHEVAANTVFVEDIEDTRY 310
BLAST of mRNA_Ecto-sp6_S_contig89.17982.1 vs. uniprot
Match: D7G6V4_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V4_ECTSI) HSP 1 Score: 283 bits (724), Expect = 8.340e-84 Identity = 200/596 (33.56%), Postives = 310/596 (52.01%), Query Frame = 1
Query: 4 IGDVIASIDLGTSRSAYAYTVEGR--DEIILGVPGRLNESKVSVERKTATAILLKRAPKKSGGWCMVAFGDGAEQEYLEARMVGGAAESDLALFKNFKMELFKGGRKGTKRSSVDDAEGISEDQKTRLPLIYVVSLALEYIKDVVVDRLNKVDSHTLKASDIRWVLTVPAIWSSFGTTFMRTAALRAGLIQQENDMEHLRLCLEPEAACLTVENHHRNVHKWENGMKVMVLDCGGGTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIKELLRCPDEQWARLDKSTEMFELMADWEAKKTDHYPGKKVWISVAGMLDLVGMSV--KDCEASRKQFNETSTVRLKTGLRASAKAEGMGRKISLTPELVSTFFKEAMVEITKATQTVLARQP--EISVVYMVGGFSASPLLQEHVTAALQQPGLRVEVVERPGLAIVLGAARYGTSDSTIVSRKARLTYGTKTMTDYDEHNPEHTKRMKH---ARYIGGALYLDTFSCYVEKGIDLPVGTD-KEETFYPLTNEQTAVSFDV-CISLKPKAGIKYLKDNGVDKQLSLLKTVSAPMDMSVPMGKRGVSMQLSFGGTELGIK 1758
+ + + +ID GT+RSA+AY V G+ ++I++ +P + S S KT TA L+ + SGG +V+FG A ++Y + V +D ALF+ FK +L + T ++ V S + +PL+ V++ +L Y K+ V+ L++ T+ + + WVLTVPAI+ F FMR AA AG+I + N LRLCLEPEAACL + G +MV+DCGGGT+DIT H ++S PL LEE+ P GG +GST D F++++K L E++ ++ + + +M WE KK + + +L G V +D E R+ +N+ L G G ++L LV++FF + +I + + + ++ V++VGGFS P+L+E + L P RV V P LAIV GA Y ++ SRKAR TYGT +D+ N EH +R + + G + FS Y+ KG D+P G K + PL QT++SF V C S + + + +NG + + VS P+DM+ KRG+ +++FGG EL +K
Sbjct: 3 VPETVVAIDFGTTRSAWAYQVSGQADNKILVKIPASADTSPSSTI-KTETAALI--GGRGSGG--LVSFGPAAIEDYAASDHV-----ADQALFRWFKFDLCES---RTDQTEVGSVMTESVGGQHTVPLLGVMTASLRYFKEDVLAFLSRTGGRTVDVNSVNWVLTVPAIYDDFAKRFMRQAAYEAGMIDRMNSTR-LRLCLEPEAACLAAITTDNPLTSNAEGKNMMVIDCGGGTVDITAHKIISVEPLTLEEVAAPDGGLFGSTRVDNAFRVWLKGFL---GEKFQEIETTRTLLSIMMSWERKKATFQGLDSAAVWRLNLSELAGYDVTNQDMENLRRSYNDGKPSSLFVG--------GEKFNVTLPTTLVTSFFTPTLQKIAECLRRIKRESQLHDLHRVFVVGGFSRCPMLREVIRNGLDLPAGRVVDVHEPDLAIVKGAVMYFDRSTSFNSRKARYTYGTGFAVPFDDSNAEHRRRRAAGLVSHHDGKVHVSNGFSIYIRKGDDIPEGGILKRRRYGPLKKSQTSMSFAVYCTSERNPS---FADENGCFE----VGRVSFPLDMTKEFQKRGIVGEMTFGGPELTVK 566
BLAST of mRNA_Ecto-sp6_S_contig89.17982.1 vs. uniprot
Match: A0A6H5JSM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSM6_9PHAE) HSP 1 Score: 271 bits (694), Expect = 2.240e-79 Identity = 196/596 (32.89%), Postives = 306/596 (51.34%), Query Frame = 1
Query: 10 DVIASIDLGTSRSAYAYTVEGRDEIILGVPGRLNESKVSVERKTATAILLKRAPKKSGGWCMVAFGDGAEQEYLEARMVGGAAESDLALFKNFKMELFKGGRKGTKRSSVDDAEGISEDQKTR--LPLIYVVSLALEYIKDVVVDRLNKVDSHTLKASDIRWVLTVPAIWSSFGTTFMRTAALRAGLIQQENDMEHLRLCLEPEAACLTVENHHRNVHKWENGMKVMVLDCGGGTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIKELLRCPDEQWARLDKSTEMFELMADWEAKK-----TDHYPGKKVWISVAGMLDLVGMSVKDCEASRKQFNETSTVRLKTGLRASAKAEGMGRKISLTPELVSTFFKEAMVEITKATQTVLARQP--EISVVYMVGGFSASPLLQEHVTAALQQPGLRVEVVERPGLAIVLGAARYGTSDSTIVSRKARLTYGTKTMTDYDEHNPEHTKRMKH---ARYIGGALYLDTFSCYVEKGIDLPVGTD-KEETFYPLTNEQTAVSFDVCISLKPKAGIKYLKDNGVDKQLSLLKTVSAPMDMSVPMGKRGVSMQLSFGGTELGIK 1758
+ I +ID GT+RSA+AY V G+ + + V + + KT T L+ + SG ++AFG A EY + D ALF+ FK++L + ++ D A ++E + R +PL+ V++ +L Y K+ V+ L++ T+ + + WVLTVPAI+ F FMR AA AG+I + + LRLCLEPEAACL + K+MV+DCGGG +DIT H ++S PL L+E+ P GG +GST D FK+++KE L +++ + + + +M+ WE+KK TD G ++ S D+ +++D E R +N+ L G G ++L LV++FF+ + +I + + + ++ V++VGGFS P+L+E V L P RV +V P LAIV GA Y + SRKAR TYGT + +++ EH +R A + G + FS Y+ KG D+PVG K ++ PL N Q A+SF V S + + + G + + VS +DM+ KRG+ +++FGG EL +K
Sbjct: 10 ETIVAIDFGTTRSAWAYQVSGQADNTILVKILASADTSASSTKTETVALI--GGRGSGD--LIAFGPAAIDEYAASDN-----PDDQALFRWFKLDLCE-----SRPDHTDFASVMTESVEARHTVPLLGVMTASLRYFKEDVLGCLSRTGGRTVDVNRVNWVLTVPAIYDDFAKRFMRQAAFEAGMIDRVHSTR-LRLCLEPEAACLAAIVKDNPLTSDATDKKMMVIDCGGGIVDITAHKIISVEPLILDEVAAPDGGLFGSTRVDHAFKVWLKEFL---GDKFQGIQTTRTLVSIMSSWESKKATFQGTDSAAGLRLNFSELAEYDV---TIQDMENLRTSYNDGKPPSLHVG--------GGKFNVTLPTTLVTSFFEPTLDKIAECLRRIKRESSLHDLYRVFVVGGFSRCPMLREVVRTGLDLPAGRVVLVHEPDLAIVKGAVMYFNRSTIFNSRKARYTYGTNCVVPFNDSIAEHRRRRAAGMCATHNGKTCLPNAFSVYIRKGDDIPVGGILKRRSYIPLKNSQQAMSFPVYGSSERNPS--FADEKGCFE----VGRVSFALDMTKQFEKRGIIGEVTFGGPELIVK 570
BLAST of mRNA_Ecto-sp6_S_contig89.17982.1 vs. uniprot
Match: D7FKB7_ECTSI (Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB7_ECTSI) HSP 1 Score: 261 bits (668), Expect = 1.560e-74 Identity = 197/632 (31.17%), Postives = 305/632 (48.26%), Query Frame = 1
Query: 13 VIASIDLGTSRSAYAYTV-------EGRDEIILGVPGRLNESKVSVERKTATAILLKRAPKKSGGWCMVAFGDGAEQEYLEARMVGGAAESDL--ALFKNFKMELFKG--GRKGTKRSSVDDAEGISEDQKTRLPLIYVVSLALEYIKDVVVDRLNKVDSHTLKASDIRWVLTVPAIWSSFGTTFMRTAALRAGLIQQENDMEHLRLCLEPEAACLTVENHHRN--VHKWENGMKVMVLDCGGGTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIKELLRCPDEQWARLDKSTEMFELMADWEAKKT---DHYPGKKVWISVAGMLDLVGMSVKDCEASRKQFNETSTVRLKTGLRASAKAEGMGRKISLTPELVSTFFKEAMVEITKATQTVLARQP--EISVVYMVGGFSASPLLQEHVTAALQQPGLRVEVVERPGLAIVLGAARYGTSDSTIVSRKARLTYGTKTMTDYDEHNPEHTKRMKHARYIGGALYLDT---------FSCYVEKGIDLPV-GTDKEETFYPLTNEQTAVSFDVCISLKPKAGIKYLKDNGVDKQLS-LLKTVSAPMDMSVPMGK-RGVSMQLSFGGTELGIKCTRCSDGHEVITSTVFVEDI 1818
++ ++D GT+RSA+AY V + D+I + +PG + + S KT TA L+ R + +VAFG A + + E G SD ALFK +K LFK G +R + G +PL+ V++ L Y K V L+ + T++A D+ WVLTVPA++ F FMR AA AG+I + +LRLCLEPEAACL V N + G K+M++DCGGGT+DITTH++V+ +PL + E+ P GG WGST D FK +++ L + + ++ K+ + +M WE KK H + V ++++ + M D E R ++N + R + EG G + L LV++FF + I + + + + V++VGGFS PLL + V A LQ RV V P +AIV GA +Y + SR+ARLTYG + +DE N EH +R R G L D F ++ G ++P G E + P++ E V S VD+ +L +S P+DM+ + R ++ +FGG EL +K ++ ++ + + + +
Sbjct: 96 IVVAVDFGTTRSAWAYKVGDDEPDDKTDDKIFVRIPGGVGPAP-SARTKTETAALINRRGRGE----LVAFGQAALERHAENTATAGGDPSDASEALFKWYKTTLFKPKPGENTVERVTATSTSG------DVVPLLGVMTATLRYFKKDAVGFLSSLTGRTIRARDVNWVLTVPAVYDDFAKHFMRQAAHEAGMIDKVGST-NLRLCLEPEAACLAVIPRGANNPLTCEAEGKKMMIVDCGGGTVDITTHNIVTIDPLNVVEVAAPTGGAWGSTQVDEAFKKWLQRFL---GDWYDKIAKTEILLSIMEFWERKKAAFDGHESAEPVRLNLSALGQRQMMDSHDLEDLRTRYNRGESRR--------NRVEGKGYMVILPTTLVTSFFTPTLDSIARCLRGIKGGSALRNLHRVFVVGGFSRCPLLMQVVRAELQNASCRVVEVSEPDIAIVRGAVKYFDESAVFNSRRARLTYGASVLHAFDEKNAEHRRR----RDAGETLKYDDRDEVMVDGCFFPHIRIGENVPTNGVTSRENYTPVSLENETNCIQVYASSARDPAF-------VDEDSCFMLGKISFPLDMTKKTRQERAYRVEFTFGGPELTVKILHRTEEKQIADAVMTLSRV 693
BLAST of mRNA_Ecto-sp6_S_contig89.17982.1 vs. uniprot
Match: A0A6H5K5B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5B9_9PHAE) HSP 1 Score: 247 bits (630), Expect = 5.240e-70 Identity = 200/618 (32.36%), Postives = 302/618 (48.87%), Query Frame = 1
Query: 7 GDVIASIDLGTSRSAYAYTVEGR--DEIILGVPGRLNESKVSVERKTATAILLKRAPKKSGGWCMVAFGDGAEQEYLE-------------ARMVGGAAESDLALFKNFKMELFKGGRKGTKRSSVDDAEGISEDQKTRLPLIYVVSLALEYIKDVVVDRLNKVDSHTLKASDIRWVLTVPAIWSSFGTTFMRTAALRAGLIQQENDMEHLRLCLEPEAACLTVENHHRNVHKWENGMKVMVLDCGGGTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIKELLRCPDEQWARLDKSTEMFELMADWEAKKTDHYPGKKVWISVAGMLDLVGMSVKDCEASRKQFNETSTVRLKTG----LRASAKAEGMGRKISLTPELVSTFFKEAMVEITKATQTVLARQ--PEISVVYMVGGFSASPLLQEHVTAALQQPGLRVEVVERPGLAIVLGAARYGTSDSTIVSRKARLTYGTKTMTDYDEHNPEHTKRMKHARY--IGGALYLDTFSCYVEKGIDLPV-GTDKEETFYPLTNEQTAVSFDVCISLKPKAGIKYLKDNGVDKQLSLLKTVSAPMDMSVPMGKRGVSMQLSFGGTELGIKCTRCSDGHEV 1788
G V ++DLGTSR+A ++ GR +E+ + P + S + KT TA LL+ K G ++AFG A + +++ R GA LF+ FK EL K + +SVD +E +T LPL+ V++ L +IK+ V+ L++ +D+ WV+T+PAI+ F FMR +A RAG+I +D L+LCLEPEAACL V + + G+K+M++DCGGGT+DITTH V S PL L+EL P GG WGS D+ F +++++L +AR+ + + LM WE KT + GK+ M+D+V F++ L L + M I L LV TFF + +I +++ + ++ V++VGGFS PL+Q+ A L + G RV V+R LAIV GA + S+ SR A+LTYG K+ YD N EH KR G +D FS ++++G +P GT + PL QT VSF + I++ + L V+ +DM RG++ + F +E ++C R + G V
Sbjct: 4 GIVDVAVDLGTSRTAIGISIPGRSENEVTVCTPNGSGHCR-SAQLKTETAALLEA--KHPHG--LLAFGKTARERFIKDAQRDEDGGGCTGRRTTSGAPNM---LFRFFKTELCK----NSGYTSVDQPVATAEGGET-LPLMTVMTAVLRHIKEDVLAHLSQRLEVDPTVADVNWVVTIPAIYDDFAKRFMRVSAHRAGIISAVDDASQLQLCLEPEAACLAVSIKEAPLLA-KAGIKLMIVDCGGGTVDITTHSVESRRPLKLKELATPTGGEWGSVCVDSMFMVWLRKLFGAT--AFARVRTTWAFYSLMDYWEEAKTA-FQGKEDEDVSLNMVDVV---------MELGFDKGKLAELVAAHNHDLEPTHHLTRMNHYIDLPSGLVRTFFAPTIDKIGNCLRSLRGKPLLRDLKYVFLVGGFSCCPLVQQAARAELDRGGCRVIDVDRRELAIVRGATIFA-SNQLAFSRIAKLTYGVKSTCIYDSSNAEHVKRRSSPPIWDSAGKEVIDAFSTHIKRGAYVPSDGTCTRRCYGPLRPNQTTVSFQILAC--HHTDIEFPDTDSTFP----LGEVTVNLDMRASFEDRGIAAEFVFCESEFLLRCFRGTTGERV 588
BLAST of mRNA_Ecto-sp6_S_contig89.17982.1 vs. uniprot
Match: A0YV32_LYNSP (Putative chaperone protein n=1 Tax=Lyngbya sp. (strain PCC 8106) TaxID=313612 RepID=A0YV32_LYNSP) HSP 1 Score: 227 bits (578), Expect = 9.240e-63 Identity = 182/603 (30.18%), Postives = 283/603 (46.93%), Query Frame = 1
Query: 13 VIASIDLGTSRSAYAYTVEGRDEIILGVPGRLNESKVSVER-KTATAILLKRAPKKSGGWCMVAFGDGAEQEYLEARMVGGAAESDLALFKNFKMELFKGGRKGTKRSSVDDAEGISEDQKTRLPLIYVVSLALEYIKDVVVDRLNKVDSHTLKASDIRWVLTVPAIWSSFGTTFMRTAALRAGLI-QQENDMEHLRLCLEPEAACLTVENHHRNVHKWENGMKVMVLDCGGGTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIKELLRCPDEQWARLDKSTEMFELMADWEAKKTDHYPGKKVWISVAGMLDLVGMSVKDCEASRKQFNETSTVRLKTGLRASAKAEGMGRKISLTPELVSTFFKEAMVEITKATQTVLARQPE--ISVVYMVGGFSASPLLQEHVTAALQQPGLRVEVVERPGLAIVLGAARYGTSDSTIVSRKARLTYGTKTMTDYDEHNPEHTKRMKHARYIGGALYL-DTFSCYVEKGIDLPVGTDKEETFYPLTNEQTAVSFDVCISLKPKAGIKYLKDNGVDKQLSLLKTVSAPMDMSVPMGKRGVSMQLSFGGTELGIKCTRCSDGHEVITSTVF 1806
VIA+ID GTSRS YAY + II GR + K + KT T L R K + A+G A E R A D + F FKM L R+ R+ + + Q+ P+I +++ L + ++ L S L+ ++I W LT+PAIW +FMR AA++AGLI END + L L LEPEAA + + + K G + MV+DCGGGT+DIT H V S GLEE+ E GG +GST D +FK ++ + L + ELMA+WE KK D P + D+ K K ++E + + + +G K+ ++PE++ + FK + + K + +R V+Y+VGGFS SP+L++ + ++ + PG AI+ GAA +G + +I SR++RLTYG +T +DE H K + G Y+ + FS +V G + + TFYP+T+EQ + + K +Y+ + V++ + + + +V R V + ++FG TE+ + G T+ F
Sbjct: 10 VIAAIDFGTSRSGYAYAFKDDKRII----GRYDWEKQPFQYIKTLTQSLYNRDRK------LEAWGYAALSRLAELRQAKNA--KDYSFFPTFKMAL----RESRYRTESGPMKIANNGQE--FPVIDLIADYLRALGGLLRTELKNATSGELRDNEILWCLTIPAIWKDAEKSFMRRAAIKAGLITNNENDRDRLLLVLEPEAAAIYCQEKDKKQLK--AGQRFMVVDCGGGTVDITCHEVSSHG--GLEEVAEGTGGAYGSTYVDKEFKEYLAKKLTVQALNRYEEEDPIGWLELMANWERKKCDFDPAT----TTITYFDIPNRLYKILS---KDYSEVLE-------KLADEQDGDDEKVHISPEIIRSMFKPVLDGLVKKVKEQFSRLGSRGCDVMYLVGGFSTSPILRQRIQQEFGDRVKKIVMPANPGAAILEGAASFGLNPESIRSRRSRLTYGCQTCAVFDEKRDRHQKSKREYFDEQGDWYICNRFSAFVLAGDSVDIDEVVTHTFYPMTSEQDRLQLKFYATRKKNP--RYIDEPDVEE----IGELDVDISSTVGTRDRPVEVSMNFGKTEIAVTAKDIKTGKTYNTNLRF 570 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17982.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig89.17982.1 >prot_Ecto-sp6_S_contig89.17982.1 ID=prot_Ecto-sp6_S_contig89.17982.1|Name=mRNA_Ecto-sp6_S_contig89.17982.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=616bp MIGDVIASIDLGTSRSAYAYTVEGRDEIILGVPGRLNESKVSVERKTATAback to top mRNA from alignment at Ecto-sp6_S_contig89:689564..694080- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig89.17982.1 ID=mRNA_Ecto-sp6_S_contig89.17982.1|Name=mRNA_Ecto-sp6_S_contig89.17982.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4517bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:689564..694080- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig89:689564..694080- >mRNA_Ecto-sp6_S_contig89.17982.1 ID=mRNA_Ecto-sp6_S_contig89.17982.1|Name=mRNA_Ecto-sp6_S_contig89.17982.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1848bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:689564..694080- (Ectocarpus species6 EcLAC_371)back to top |