prot_Ecto-sp6_S_contig89.17945.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig89.17945.1
Unique Nameprot_Ecto-sp6_S_contig89.17945.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length305
Homology
BLAST of mRNA_Ecto-sp6_S_contig89.17945.1 vs. uniprot
Match: D8LKE1_ECTSI (Similar to retinitis pigmentosa GTPase regulator n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE1_ECTSI)

HSP 1 Score: 458 bits (1179), Expect = 1.360e-151
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
Query:   90 KEPRICASVQETPKAVPLDRFVKKGDSPAFAAAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 304
            KEPRICASVQETPKAVPLDRFVKKGDSPAFAAAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK
Sbjct:   25 KEPRICASVQETPKAVPLDRFVKKGDSPAFAAAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 239          
BLAST of mRNA_Ecto-sp6_S_contig89.17945.1 vs. uniprot
Match: K8Z8W0_NANGC (Hect domain and rld 4 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8W0_NANGC)

HSP 1 Score: 199 bits (506), Expect = 2.030e-56
Identity = 100/210 (47.62%), Postives = 136/210 (64.76%), Query Frame = 0
Query:   97 SVQETPKAVPLDRFVKKGDSPAF-AAAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLG-ERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 304
            SV   P+ + L+R+V + D      A GA  +I  TS G  ++WG  +G  +P P+ V   +PL C++V CGRKH +ALM+GGFV SWG GYFGQLG GDN S   PRL+  LDP RLG +RVV VACGG HSAV T    VF +GFNRYGQ G G   N +  P  V++S +      ++ +++CGRHH++++T  G +++WGA SFG+
Sbjct:  107 SVLHLPQPLALERYVAEEDGLVQDIACGATFTIALTSRGVPYQWGTVNGRAYPEPSRVSLGVPLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMSGI---GSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGR 313          
BLAST of mRNA_Ecto-sp6_S_contig89.17945.1 vs. uniprot
Match: W7U0Q3_9STRA (Putative e3 ubiquitin-protein ligase herc4 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0Q3_9STRA)

HSP 1 Score: 199 bits (506), Expect = 3.210e-56
Identity = 100/210 (47.62%), Postives = 136/210 (64.76%), Query Frame = 0
Query:   97 SVQETPKAVPLDRFVKKGDSPAF-AAAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLG-ERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 304
            SV   P+ + L+R+V + D      A GA  +I  TS G  ++WG  +G  +P P+ V   +PL C++V CGRKH +ALM+GGFV SWG GYFGQLG GDN S   PRL+  LDP RLG +RVV VACGG HSAV T    VF +GFNRYGQ G G   N +  P  V++S +      ++ +++CGRHH++++T  G +++WGA SFG+
Sbjct:   61 SVLHLPQPLALERYVAEEDGLVQDIACGATFTIALTSRGVPYQWGTVNGRAYPEPSRVSLGVPLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMSGI---GSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGR 267          
BLAST of mRNA_Ecto-sp6_S_contig89.17945.1 vs. uniprot
Match: A0A4D9DAH8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAH8_9STRA)

HSP 1 Score: 173 bits (438), Expect = 9.590e-47
Identity = 82/159 (51.57%), Postives = 110/159 (69.18%), Query Frame = 0
Query:  147 HPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLG-ERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 304
            +P P+ V   +PL C++V CGRKH +ALM+GG+V SWG GYFGQLG GDN S   PRL+  LDP RLG +RVV VACGG HSAV T    VF +GFNRYGQ G G   N +  P  V++S +      ++ +++CGRHH++++T  G +++WGA SFG+
Sbjct:   28 YPEPSRVSLGVPLRCLQVSCGRKHALALMEGGYVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMSGI---GSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGR 183          
BLAST of mRNA_Ecto-sp6_S_contig89.17945.1 vs. uniprot
Match: A0A835Z434_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z434_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.120e-46
Identity = 83/149 (55.70%), Postives = 99/149 (66.44%), Query Frame = 0
Query:  157 IPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGS-KDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 304
            +PL  +++ CGR+H+VALM+GGFVM+WG GYFGQLGHGDNAS  +PRLL +L+PQ++    V VA GGYHS   T AGR F WGFNRYGQCG G   D  V EP  V L  +     G V    CGRHH   V  GG +Y WGA  FG+
Sbjct:    3 VPLAAVQIACGRRHSVALMEGGFVMTWGIGYFGQLGHGDNASCTNPRLLHQLEPQQI----VSVAAGGYHSVAVTRAGRGFAWGFNRYGQCGVGDCADAVVSEPRAVALRELRARGEG-VRAAACGRHHCVAVGTGGGVYAWGAGGFGR 146          
BLAST of mRNA_Ecto-sp6_S_contig89.17945.1 vs. uniprot
Match: A0A7S2CLQ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CLQ1_9STRA)

HSP 1 Score: 141 bits (356), Expect = 4.560e-37
Identity = 73/177 (41.24%), Postives = 108/177 (61.02%), Query Frame = 0
Query:  121 AAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRL-GERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCG-------NGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVT 289
            A G + ++  T++G ++ WG + G++ P P  +     +  + V CGRKHT+ L++G  V+S+GTGYFGQLGHG+++S R+PR++  LD + L G+RV  VA G  HS V T  GR++ WG NR  QCG       +G   +T+  P   DLS V     G   +++CGRHH AL+T
Sbjct:   68 ACGGHFTVAATTQGTVYHWGSDGGEMRPKPELMELGTKVCAVTVACGRKHTLILVEGARVLSYGTGYFGQLGHGNDSSLRNPRVIESLDSKALNGDRVTAVAAGFAHSGVVTHTGRLYMWGLNRSCQCGVEPPTGSSGLAASTLFAPHPTDLSNVKDH--GRPVQLVCGRHHPALLT 242          
BLAST of mRNA_Ecto-sp6_S_contig89.17945.1 vs. uniprot
Match: A0A7S3GVQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVQ9_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.850e-35
Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = 0
Query:  183 WGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNG----SKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 304
            WGTGYFGQLGHGD++S+  PR++  L+P+RLG +V+ VACGG HS V TD+GRVF WG NR GQCG G     K ++V EP  VD S +       V  ++ GR+HSA+++  G ++TWG   FG+
Sbjct:    1 WGTGYFGQLGHGDDSSWDSPRMISVLEPKRLGAKVINVACGGSHSGVITDSGRVFMWGLNRSGQCGQGLSAKGKSDSVLEPRPVDFSHLANHGTLGVKSLVLGRNHSAMLSTTGRVFTWGEAGFGR 126          
BLAST of mRNA_Ecto-sp6_S_contig89.17945.1 vs. uniprot
Match: A0A7S3QFB8_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QFB8_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.870e-25
Identity = 80/247 (32.39%), Postives = 124/247 (50.20%), Query Frame = 0
Query:   95 CASVQETP---KAVPLDRFVKKGDSPAFAAAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHG-DNASYRHPRLLRRLDPQRLG---ERVVQVACGG--------YHSAVATD----------AGRVFTWGFNRYGQCG-NGSKDNTVPEPS-LVDL-----SRVTPGAVGEVP-----KVLCGRHHSALVTRGGALYTWGACSFGK 304
            C+S+ E P   K  P+ + +  G +    A    HS  +  +  ++  G   G +H  PT   +++PL C +V CGR+HT+A  +G  VMSWG+GYFGQLGHG D     HP  + RL P+ +G     +V ++ GG        YH   ++D            RVF WG NR+GQC   G K N V  P+ +VD+     +  + GA   +      ++  G+ H+  +T  G +Y+WG+ + G+
Sbjct:   40 CSSLVELPYGSKTNPI-QAMDVGMTHVATAMEPVHSSSKDYKKGIYITGTLHGIIHQIPTLSPSRLPLQCTQVACGRRHTLASFEGRVVMSWGSGYFGQLGHGLDRIHCLHPTAIERLMPRYVGGDGASIVSISAGGMQSAAIVAYHMKSSSDWEKRHLLKDITTRVFRWGSNRHGQCAVEGGKSNAVAYPTPMVDVYHPENATASQGANKAIVSSNFVEIALGKSHAVGLTHHGEVYSWGSTAAGR 285          
BLAST of mRNA_Ecto-sp6_S_contig89.17945.1 vs. uniprot
Match: A0A7S2PM89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PM89_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.900e-25
Identity = 69/193 (35.75%), Postives = 102/193 (52.85%), Query Frame = 0
Query:  121 AAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRK---------HTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 304
            A G+ H+ + T++G L+ WG ++  V         Q     +E   G+K         HT  L   G   +WG G FG+LGHG   +   PRL+  L    LG+R  Q+ACGG+HSAV T+ G+++T+G   +GQ G+G K N V +P+LV   +   G V  + ++ CG  HS  +T  G ++TWG    GK
Sbjct:   93 ACGSRHTAVVTNKGCLYTWGDKENGVAGHGDTDGHQYTPKLLERLSGKKVVQLSACGFHTGCLTDQGECFTWGEGKFGRLGHGAERNCHSPRLIETL----LGKRPKQIACGGFHSAVVTEDGKMYTFGGGEHGQLGHGDKVNKV-KPTLV---QALDGIV--LQQITCGWSHSVALTTNGEVFTWGNGDHGK 275          
BLAST of mRNA_Ecto-sp6_S_contig89.17945.1 vs. uniprot
Match: A0A7S2A6T9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6T9_TRICV)

HSP 1 Score: 114 bits (285), Expect = 3.880e-25
Identity = 69/193 (35.75%), Postives = 97/193 (50.26%), Query Frame = 0
Query:  121 AAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRK---------HTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 304
            A G+ H+ + TS G L+ WG ++  V         Q     +E   G++         HT  L   G V +WG G FG+LGHG   +   PRL+  L    LG+R  QVACGG+H+AV T+ GR++T+G   +GQ G+G K N V    +  L  +       V ++ CG  HS  +T  G +YTWG    GK
Sbjct:   41 ACGSRHTAVITSTGALYTWGDKENGVAGHGDTEGHQYTPKLLERLAGKRIVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSPRLVEAL----LGKRPRQVACGGFHTAVITEDGRMYTFGGGEHGQLGHGDKVNKVKPTFVQALEGIF------VSQITCGWSHSVALTSKGRVYTWGNGDHGK 223          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKE1_ECTSI1.360e-151100.00Similar to retinitis pigmentosa GTPase regulator n... [more]
K8Z8W0_NANGC2.030e-5647.62Hect domain and rld 4 (Fragment) n=1 Tax=Nannochlo... [more]
W7U0Q3_9STRA3.210e-5647.62Putative e3 ubiquitin-protein ligase herc4 n=1 Tax... [more]
A0A4D9DAH8_9STRA9.590e-4751.57Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A835Z434_9STRA1.120e-4655.70Regulator of chromosome condensation 1/beta-lactam... [more]
A0A7S2CLQ1_9STRA4.560e-3741.24Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3GVQ9_9STRA1.850e-3550.79Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S3QFB8_9STRA1.870e-2532.39Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S2PM89_9STRA2.900e-2535.75Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S2A6T9_TRICV3.880e-2535.75Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 236..252
score: 31.37
coord: 179..195
score: 44.12
coord: 292..305
score: 18.63
coord: 217..230
score: 41.67
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 178..229
e-value: 2.6E-11
score: 44.0
coord: 234..287
e-value: 2.1E-12
score: 47.5
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 164..174
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 234..291
score: 13.7
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 178..233
score: 15.509
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 8..305
e-value: 1.7E-50
score: 173.8
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 9..303
NoneNo IPR availablePANTHERPTHR22870:SF335coord: 121..256
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 121..256
NoneNo IPR availablePANTHERPTHR22870:SF335coord: 161..304
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 161..304
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..305
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig89contigEcto-sp6_S_contig89:401673..407525 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig89.17945.1mRNA_Ecto-sp6_S_contig89.17945.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig89 401673..407525 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig89.17945.1 ID=prot_Ecto-sp6_S_contig89.17945.1|Name=mRNA_Ecto-sp6_S_contig89.17945.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=305bp
MPSLGAPILLSFGVGFSYQLGLEEPSESSKRQAKEGGGPERKETPTSSGD
RRRRIAGSESSRRGRGSGGSSSGSGSGSSGEVGDRADGVKEPRICASVQE
TPKAVPLDRFVKKGDSPAFAAAGANHSILRTSEGKLFRWGVEDGDVHPFP
TGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYR
HPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNG
SKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGAC
SFGKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II