prot_Ecto-sp6_S_contig85.17677.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig85.17677.1
Unique Nameprot_Ecto-sp6_S_contig85.17677.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length361
Homology
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BLAST of mRNA_Ecto-sp6_S_contig85.17677.1 vs. uniprot
Match: A0A0C2LRM3_9CYAN (AIG1-type G domain-containing protein n=1 Tax=Tolypothrix campylonemoides VB511288 TaxID=1245935 RepID=A0A0C2LRM3_9CYAN)

HSP 1 Score: 62.0 bits (149), Expect = 1.080e-7
Identity = 47/185 (25.41%), Postives = 91/185 (49.19%), Query Frame = 0 
Query:   20 MIVGKSGAGKSTLGNALLNAELGPEDEYVPHFEERGGTKGCTQEITSR--TSVDGNMRVIDTPGIPDPDRHKTAKYFNTIVKKIREVSAVNLLIFLVKEDRT----DEKQFKDYCTLLKQINYIPWNK--MMVCRQSDFAHRPNQEAILKKRKEGLNFVADIQRLSGMDMPF-----KLHLDGIS 191
            ++VG++G GKS+  N++    +     Y          + CT+ I     +S  G++ +IDTPG+ + D     KY + ++K   + + +++LI++ + D T    DEK  +  C L +++  + WNK  ++    +   +    EA + ++++  NFV  I    G++ PF     KL +D  S
Sbjct:    5 LVVGRTGVGKSSFVNSVFGKYITETSRY----------EACTKIIQHHVYSSPQGDICLIDTPGLAEDDIECDKKYLD-LIKASVDFTKIDVLIYVSRLDETRFRPDEK--RTICLLTEKLGALIWNKAWLIFTFAASVPNENRHEASINRKEQIENFVKAITSEYGLNPPFQGFQVKLRVDNTS 176
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BLAST of mRNA_Ecto-sp6_S_contig85.17677.1 vs. uniprot
Match: A0A812JAG2_9DINO (HERC6 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812JAG2_9DINO)

HSP 1 Score: 59.7 bits (143), Expect = 2.600e-6
Identity = 35/113 (30.97%), Postives = 59/113 (52.21%), Query Frame = 0 
Query:   17 VTVMIVGKSGAGKSTLGNALLNAELG---PEDEYVPHFEERGGTKGCTQEITSRTSVDGNMRVIDTPGIPDPDRHKTAKYFNTIVKKIREVSAVNLLIFLVKEDRTDEKQFKD 126
            V ++++G +G GKS+LGN LL+ +L     ED     F        CT   + + S DG +R++DTPG+ +          N +VK  R++  V+ +I  +K D   ++ +KD
Sbjct:   29 VNILMLGATGHGKSSLGNFLLHPDLRYIFEEDGCRQPFRVGDDRLSCTASCSIKDSPDGQVRIMDTPGLNESHERDLHHMIN-VVKTARQLHHVHAVILAMKMDSRMDQTYKD 140
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig85.17677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A0C2LRM3_9CYAN1.080e-725.41AIG1-type G domain-containing protein n=1 Tax=Toly... [more]
A0A812JAG2_9DINO2.600e-630.97HERC6 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 232..252
NoneNo IPR availableCOILSCoilCoilcoord: 299..319
NoneNo IPR availableGENE3D3.40.50.300coord: 16..175
e-value: 1.2E-17
score: 66.1
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 19..127
e-value: 1.9E-12
score: 47.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 17..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig85contigEcto-sp6_S_contig85:423318..429746 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig85.17677.1mRNA_Ecto-sp6_S_contig85.17677.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig85 423197..430531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig85.17677.1 ID=prot_Ecto-sp6_S_contig85.17677.1|Name=mRNA_Ecto-sp6_S_contig85.17677.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=361bp
MAEPGVGGASPEEAVAVTVMIVGKSGAGKSTLGNALLNAELGPEDEYVPH
FEERGGTKGCTQEITSRTSVDGNMRVIDTPGIPDPDRHKTAKYFNTIVKK
IREVSAVNLLIFLVKEDRTDEKQFKDYCTLLKQINYIPWNKMMVCRQSDF
AHRPNQEAILKKRKEGLNFVADIQRLSGMDMPFKLHLDGISPCALKCVEE
IAACARTSARIPLGDCPSLQTVEERRTFVSRLMSMKDRASALKEELTRAA
NAIVYHQRWRAGYTGVLVASNAVLLETEGISILPALAARGMIYITDRQIK
TITTEKEKAKKELDTKKVDEDLFAEAKQEYEDLNKFCQGGGSPEASVQEP
EASGQEPSTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR027417P-loop_NTPase