prot_Ecto-sp6_S_contig84.17577.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig84.17577.1
Unique Nameprot_Ecto-sp6_S_contig84.17577.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length415
Homology
BLAST of mRNA_Ecto-sp6_S_contig84.17577.1 vs. uniprot
Match: D7FRK1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRK1_ECTSI)

HSP 1 Score: 743 bits (1918), Expect = 1.440e-269
Identity = 409/414 (98.79%), Postives = 409/414 (98.79%), Query Frame = 0
Query:    1 MEALVNIAYDRISEDIILLYDAMRAYNEAPAPRPDISAVIAAIRGSLAKDSEKAMGHVWSRENSNEAGGFSQRGGELDPDEDVYGSNDINSSPSERFGADDGGMVPMGKEPQLWEFARDVVTSLVSDLAVIPLWQVKVSAVAHRGRLPELWPFIGYRKAMTAIINEEGTSSLFRGWGPVCAAGLLRYFRRSKLLYTDYYWKTTHRVTTRFIMRSDSYSRHVNDPEVLAQTYEGFFTRILWAGILHPFDLLATRMMTESRPEYATGTASVRHVLKQSGFAGLFLGVRSSILNVLLPFGNWYLLGVPFLIKTRRMLDGMDTVFRAGMGGSLDMVRAILKEEGFAGLFAGYRATLWGIGPAFLSLCGARLLVYVVLGSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLKSSAAK 414
            MEALVNIAYDRISEDIILLYDAMRAYNEAPAPRPDISAVIAAIRGSLAKDSEKAMGHVWSRENSNE GGFSQRG ELDPDEDVYGSNDINSSPSERFGADDGGMVPMGKEPQLWEFARDVVTSLVSDLAVIPLWQVKVSAVAHRGRLPELWPFIGYRKAM AIINEEGTSSLFRGWGPVCAAGLLRYFRRSKLLYTDYYWKTTHRVTTRFIMRSDSYSRHVNDPEVLAQTYEGF TRILWAGILHPFDLLATRMMTESRPEYATGTASVRHVLKQSGFAGLFLGVRSSILNVLLPFGNWYLLGVPFLIKTRRMLDGMDTVFRAGMGGSLDMVRAILKEEG AGLFAGYRATLWGIGPAFLSLCGARLLVYVVLGSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLKSSAAK
Sbjct:    1 MEALVNIAYDRISEDIILLYDAMRAYNEAPAPRPDISAVIAAIRGSLAKDSEKAMGHVWSRENSNE-GGFSQRGEELDPDEDVYGSNDINSSPSERFGADDGGMVPMGKEPQLWEFARDVVTSLVSDLAVIPLWQVKVSAVAHRGRLPELWPFIGYRKAMMAIINEEGTSSLFRGWGPVCAAGLLRYFRRSKLLYTDYYWKTTHRVTTRFIMRSDSYSRHVNDPEVLAQTYEGFATRILWAGILHPFDLLATRMMTESRPEYATGTASVRHVLKQSGFAGLFLGVRSSILNVLLPFGNWYLLGVPFLIKTRRMLDGMDTVFRAGMGGSLDMVRAILKEEGLAGLFAGYRATLWGIGPAFLSLCGARLLVYVVLGSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLKSSAAK 413          
BLAST of mRNA_Ecto-sp6_S_contig84.17577.1 vs. uniprot
Match: A0A836CAD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAD8_9STRA)

HSP 1 Score: 258 bits (658), Expect = 2.600e-77
Identity = 167/393 (42.49%), Postives = 212/393 (53.94%), Query Frame = 0
Query:    1 MEALVNIAYDRISEDIILLYDAMRAYNEAPAPRPDISAVIAAIRGSLAK-DSEKAMGHVWS---RENSNEAGG----------FSQRGGELDPDEDVYGSNDINSSPSERFGADDGGMVPMGKEPQLWEFARDVVTSLVSDLAVIPLWQVKVSAVAHRGRLPELWPFIGYRKAMTAIINEEGTSSLFRGWGPVCAAGLLRYFRRSKLLYTDYYWKTTHRVTTRFIMRSDS-------YSRHVNDPEVLAQTYEGFFTRIL--------------------------WAGILHPFDLLATRMMTESRPEYATGTASVRHVLKQSG--------------FAGLFLGVRSSILNVLLPFGNWYLLGVPFLIKTRRMLDG-MDTVFRAGMGGSLDM 331
            MEALVN AYDRISEDIILLYDA +AY EA +PRP +SA++ AIR  L + D  +    VWS   RE+    GG          F+              + D++    ++  A+    V    E  L E  R V+TS++SDLAV+P W VKVSAVA RGRLPELWPF GYR A  AI  EEG + LFRG  P+CA G+LRY RR++ LY+DYYWKTT R+T R +++  S       ++    DPE+    YEG   R +                          WA  LHPFDLLATRM+TE+   YAT  A++R                     +AGLF GVRSSI+   LP  +WY LGVPFL+KTRRM    + +    G+G  L +
Sbjct:    1 MEALVNSAYDRISEDIILLYDAFQAYEEA-SPRPPLSALLEAIRQVLKEEDKGRKAWSVWSSISREDLRALGGARMGQSVTHSFTALSHLAQVAAGAADTADVDGDGPDKTDAETDAEVLESTESGLREVVRVVLTSVLSDLAVLPFWTVKVSAVAARGRLPELWPFQGYRVAFAAIAREEGWAGLFRGAAPICAGGILRYLRRNRRLYSDYYWKTTQRLTARLVIKDRSARAEMAVHAALALDPEMAVHAYEGVLGRAVCSDRSXXXXXXXXXXXXXXXXXXXXVWAVALHPFDLLATRMITEAGARYATVRAALRTAAGSXXXXXXXXXXXAGDGHWAGLFAGVRSSIIGACLPCSSWYALGVPFLVKTRRMASASVGSDLEPGLGFGLQV 392          
BLAST of mRNA_Ecto-sp6_S_contig84.17577.1 vs. uniprot
Match: A0A7S2C0Y1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C0Y1_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.200e-13
Identity = 43/107 (40.19%), Postives = 71/107 (66.36%), Query Frame = 0
Query:  272 VLKQSGFAGLFLGVRSSILNVLLPFGN--WYLLGVPFLIKTRRMLDGMDTVFRAGMGGSLDMVRAILKEEGFAGLFAGYRATLWGIGPAFLSLCGARLLVYVVLGSS 376
            V   + + GLF+GVR SILN LLP G+  +++LG+P L++ RRML+   T    G+GG+++++R ++K +G +GLFAG RA + G+ P   ++  A    ++V GS+
Sbjct:    2 VYATNSWRGLFVGVRLSILNTLLPTGSSTFFMLGIPSLLRIRRMLE--TTPAADGLGGAIEILRQVVKSDGPSGLFAGGRAVVDGLFPTAAAIWIAGTASWLVTGST 106          
BLAST of mRNA_Ecto-sp6_S_contig84.17577.1 vs. uniprot
Match: A0A836CH83_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH83_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 7.400e-11
Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 0
Query:  323 AGMGGSLDMVRAILKEEGFAGLFAGYRATLWGIGPAFLSLCGARLLVYVVLGSS 376
            +G+GGSLD++R I+  +G  GLFAG +A+ WG  PAF +LC ARLLVY++ GSS
Sbjct:   12 SGLGGSLDLLRDIISTQGVTGLFAGLKASCWGFVPAFGALCAARLLVYMITGSS 65          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig84.17577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FRK1_ECTSI1.440e-26998.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAD8_9STRA2.600e-7742.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2C0Y1_9STRA1.200e-1340.19Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A836CH83_9STRA7.400e-1157.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10coord: 106..303
e-value: 7.3E-14
score: 53.1
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10coord: 304..405
e-value: 7.2E-6
score: 26.9
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 111..292
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 307..359
NoneNo IPR availablePANTHERPTHR45683FAMILY NOT NAMEDcoord: 222..297
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..288
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 356..376
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 337..355
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 320..336
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 289..308
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 309..319
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 377..414
NoneNo IPR availableTMHMMTMhelixcoord: 352..374
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 110..202
score: 6.681
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 224..310
score: 9.963

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig84contigEcto-sp6_S_contig84:249344..256105 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig84.17577.1mRNA_Ecto-sp6_S_contig84.17577.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig84 249344..256105 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig84.17577.1 ID=prot_Ecto-sp6_S_contig84.17577.1|Name=mRNA_Ecto-sp6_S_contig84.17577.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=415bp
MEALVNIAYDRISEDIILLYDAMRAYNEAPAPRPDISAVIAAIRGSLAKD
SEKAMGHVWSRENSNEAGGFSQRGGELDPDEDVYGSNDINSSPSERFGAD
DGGMVPMGKEPQLWEFARDVVTSLVSDLAVIPLWQVKVSAVAHRGRLPEL
WPFIGYRKAMTAIINEEGTSSLFRGWGPVCAAGLLRYFRRSKLLYTDYYW
KTTHRVTTRFIMRSDSYSRHVNDPEVLAQTYEGFFTRILWAGILHPFDLL
ATRMMTESRPEYATGTASVRHVLKQSGFAGLFLGVRSSILNVLLPFGNWY
LLGVPFLIKTRRMLDGMDTVFRAGMGGSLDMVRAILKEEGFAGLFAGYRA
TLWGIGPAFLSLCGARLLVYVVLGSSRRTSEHRRRRNAHLRHLMMTSHRE
QQQQQAKLKSSAAK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom_sf
IPR018108Mitochondrial_sb/sol_carrier