mRNA_Ecto-sp6_S_contig84.17574.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig84.17574.1 vs. uniprot
Match: D7FRJ9_ECTSI (Trypsin domain protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRJ9_ECTSI) HSP 1 Score: 607 bits (1564), Expect = 1.240e-201 Identity = 302/315 (95.87%), Postives = 310/315 (98.41%), Query Frame = 1
Query: 1 LVLSPTLVGDYEIKEQGWTDETVTISLSIDPGAMWANVRADDQTVEVKVVSIDTGGGEIFMPGGGVVVAEVRKDDATFNCEDSCVYANDGQCDEDRDGVEAVNWSGAMTDSNGESESFTSQASGSRGYLGSSAMPGEDSDDLVLVNSPSCPLGTDCTDCGLELAEDGRCTNTCRFARDGVCDDRRAVGLCADGXXXXXXGPWGQSNFTEAIEYAISFSDAYDDDGFLADDANHPILDGQTGNGIGRFKRVFVKHNSIRKESDKAEGVFMETLWAAIVLVGCSVTTYLTVLVVRCARGEKVELPIPTNPDLDRSRR 945
LVLSPTLVGDYEIKEQGWTDETVTISLS DPGAMWANVRADD+TVEVKVVS+DTGGGE+FMPGGG+V+AEVRKDDATFNCEDSCVYANDGQCDEDRDGVEAVNWSGAMTDS GESESFTSQASGSRGYLGSSAMPGEDSDDLVLVNSPSCPLGTDCTDCGLELAEDGRCTNTCRFARDGVCDDRRAVGLCADGXXXXXXGPW QSNFTE +EYA SFSDAYDDDGFLA+DANHPILDGQTGNGIGRFKRVFVKHNSIRKESDKAEGVFMETLWAAIVLVGCSVTTYLTVLVVRCARGEKVELP+PTNPDLDRSRR
Sbjct: 536 LVLSPTLVGDYEIKEQGWTDETVTISLSTDPGAMWANVRADDKTVEVKVVSVDTGGGEVFMPGGGIVIAEVRKDDATFNCEDSCVYANDGQCDEDRDGVEAVNWSGAMTDSIGESESFTSQASGSRGYLGSSAMPGEDSDDLVLVNSPSCPLGTDCTDCGLELAEDGRCTNTCRFARDGVCDDRRAVGLCADGXXXXXXGPWDQSNFTEVVEYATSFSDAYDDDGFLANDANHPILDGQTGNGIGRFKRVFVKHNSIRKESDKAEGVFMETLWAAIVLVGCSVTTYLTVLVVRCARGEKVELPVPTNPDLDRSRR 850
BLAST of mRNA_Ecto-sp6_S_contig84.17574.1 vs. uniprot
Match: A0A6H5KYJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ3_9PHAE) HSP 1 Score: 267 bits (683), Expect = 5.310e-77 Identity = 144/203 (70.94%), Postives = 154/203 (75.86%), Query Frame = 1
Query: 193 GVVVAEVRKDDATFNCEDSCVYANDGQCDEDRDGVEAVNWSGAMTDSNGESESFTSQASGSRGYLGSSAMPGEDSDDLVLVNSPSCPLGTDCTDCGLELAEDGRCTNTCRFARDGVCDDRRAVGLCADGXXXXXXGPWGQSNFTEAI--------EYAISFSDAYDDDGFLADDANHPILDGQTGNGIGRFKRVFVKHNSIRK 777
GVV+AEVRKDDATFNCEDSCVYANDGQCDE R + S YLGSS+M G DSDD++L ++PSCPLGTDCTDCGLELAEDG+CTNTCRFARDGVCDDRRAVGLCAD XXXXXXGPWGQSNFTEA E S S+AYDDDGFLA+D NHPILDGQ GNGIGRFKRVFVKHNSIRK
Sbjct: 230 GVVIAEVRKDDATFNCEDSCVYANDGQCDEIR-------------------------VTSSVAYLGSSSMLGGDSDDVILADAPSCPLGTDCTDCGLELAEDGKCTNTCRFARDGVCDDRRAVGLCADXXXXXXXGPWGQSNFTEASGGGGERVWESPTSLSEAYDDDGFLANDPNHPILDGQAGNGIGRFKRVFVKHNSIRK 407
BLAST of mRNA_Ecto-sp6_S_contig84.17574.1 vs. uniprot
Match: A0A835YLV2_9STRA (Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLV2_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.550e-37 Identity = 124/307 (40.39%), Postives = 158/307 (51.47%), Query Frame = 1
Query: 43 EQGWTDETVTISLSIDPGAMWANVRADDQTVEVKVVSIDTGGGEIFMPGGGVVVAEVRKDDATFNCEDSCVYANDGQCDEDR---DGVEAVN---WSGAMTDSNGESESFTSQASGSRGYLGSSAMPGEDSDDLVLVNSPSCPLGTDCTDCGLELAEDGRCTNTC-RFARDGVCDDRRAVGLCADGXXXXXXGPWGQSNFTEAIEYAISFSDA----YDDDG--FLADDANHPILDGQTGNGIGRFKRVFVKHNSIRKESDKAEGVFMETLWAAIVLVGCSVTT-YLTVLVVRCARGEKVELPIPTN 921
+ WT +I L ++ G WA + + T +KV IDTG G + +P GGV V V D CED+CVY DG CDE GV N W + D+N S ++S +G GYL SS SDDL +P C GTDCTDCG+ L +DG CTNTC + ARDG CDD R G C XXXXXXGP G NFT A S + Y DD FL DD L+GQ N ++R F H S E + G+FM+ LWA ++LVG +V+ + V R G+ +P+P
Sbjct: 587 DSNWTP--TSIQLLLNEGKSWAKLSGAE-TASLKVSKIDTGAGLVTLPNGGVHVVTVHADSNEVICEDTCVYPADGTCDEPSAKTGGVLGTNHGKWGYSDDDANFHSAGYSSSYAGQHGYLASSYG----SDDLGFGIAP-CDPGTDCTDCGVHLPDDGFCTNTCLKMARDGWCDDTRGGGTCLLXXXXXXXGPVGHDNFTNGAWGAGSAYGSGENWYTDDSSNFLLDD--DWALEGQAANAKPIYQRTFQDHESRHNEMEGEGGIFMDVLWAIVILVGGTVSLGFCMVAYRRLKSGDTNFVPLPVG 883
BLAST of mRNA_Ecto-sp6_S_contig84.17574.1 vs. uniprot
Match: D8LG95_ECTSI (Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG95_ECTSI) HSP 1 Score: 160 bits (406), Expect = 8.580e-37 Identity = 128/347 (36.89%), Postives = 179/347 (51.59%), Query Frame = 1
Query: 13 PTLVGD------YEIKEQGWTDETVTISLSIDPGAMWANVRADDQTVEVKVVSIDTGGGEIFMPGGGVVVAEVRKDDATFNCEDSCVYANDGQCDEDRDGV------------------EAVNWS----GAMTDSNGESESFTSQASGSRGYLGSSAMP---GEDSDDLVLVNSPS-CPLGTDCTDCGLELAEDGRCTNTCRFARDGVCDDRRAVGLCADGXXXXXXGPWGQSNFTEAIEYAISFSDAYDDDGFLADDANHPILDGQTGNGIGRFKRVFVKHNSIRKESDKAEGVFMETLWAAIVLVGCSVTTYLTVLVVRCAR----GEKVELPIPTNPDLDRSRR 945
PT+V D Y+I++ W D +T+SL GA WA V + T +K++SIDTG G + +P G V +A VR+D +T CEDSC +A DGQCDE GV + +N++ G D + S T+ SG Y G G DD N S C +GTDCTDCG++ +DG CTNTC+ ARDG CDD RA G+C XXXXXX PWG N + S +DDD + + +L GQ N +KR + H + KE+ A +F++ LWA +VLVGCS++ ++ R + G + LP+ +++ SRR
Sbjct: 567 PTIVIDGISSSNYKIQDN-WRDNVMTLSLL--EGA-WATVPEGEVT-PIKIMSIDTGAGTVSLPSG-VQIANVREDSSTNLCEDSCSFAADGQCDEP--GVAFGTSSSYGGSYMGSYYSDMLNYNPYGLGWGYDDDANSFLGTNDYSGMYRYAGYDTTYQYYGMTLDDDGFFNGMSPCDVGTDCTDCGVKFVDDGTCTNTCQHARDGYCDDPRASGVCPXXXXXXXXXPWGDGNSNFTLTTFYQSSSWFDDDDWEMLWNDDGVLYGQEMNAQAPYKRDWNDHEVLHKEAPGAGTIFVDVLWAMVVLVGCSMSLGGCMVAYRHFKAGGGGAPMYLPVQAAEEVELSRR 905
BLAST of mRNA_Ecto-sp6_S_contig84.17574.1 vs. uniprot
Match: A0A836CM60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM60_9STRA) HSP 1 Score: 127 bits (319), Expect = 4.220e-26 Identity = 92/221 (41.63%), Postives = 123/221 (55.66%), Query Frame = 1
Query: 46 QGWTDETVTISLSIDPGAMWANVRADDQTVEVKVVSIDTGGGEIFMP--GGGVVVAEVRKDDATFNCEDSCVYANDGQCDEDRDGV--EAVNWSGAMTDSNGESESFTSQ---------------------ASGSRGYLGSSAMPGEDSDDLVLVNSPSCPLGTDCTDCGLELAEDGRCTNTCR-FARDGVCDDRRAVGLCADGXXXXXXGPWGQSNFTEA 630
Q WTD T+ +SL +D G WA + +D+ T +++V+S+DTG G + + GGGV V V DD CED+C+YANDG+CDE + V+W + ++N + SF+S A SRGY+ SDD+ ++ C GTDCTDCG+++A DG CTNTCR RDGVCDD R G XXXXXX P G SNFT +
Sbjct: 696 QDWTDTTLQVSL-VD-GYEWARL-SDNATSDIRVLSVDTGAGLVAVGEGGGGVHVVTVHADDEDTICEDTCIYANDGRCDEASGEYPDDGVDWGLSDDEANFRANSFSSSDPANVYAGISXXXXXXXXXXXAFSSRGYV---------SDDVAFGHA-ECEPGTDCTDCGIQVAVDGTCTNTCRRHPRDGVCDDARGTGXXXXXXXXXXXXPVGASNFTSS 903
BLAST of mRNA_Ecto-sp6_S_contig84.17574.1 vs. uniprot
Match: A0A7S3XT52_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT52_HETAK) HSP 1 Score: 114 bits (286), Expect = 3.000e-22 Identity = 89/219 (40.64%), Postives = 109/219 (49.77%), Query Frame = 1
Query: 1 LVLSPTLVGDYEIKEQGWTDETVTISLSIDPGAMWANVRADDQTVEVKVVSIDTGGGEI-FMPGGGVVVAEVRKD---DATFNCEDSCVYANDGQCDEDRDGVEAVNWS----GAMTDSNGESESFTSQASGSRGYLGSSAMPGEDSDDLVLVNSPSCPLGTDCTDCGLELAEDG--RCTNTCRFARDGVCDDRRAVGLCADGXXXXXXGPWGQSNFTE 627
L L+PT D+EI TD +T+ L PG WA V D+T ++K+ +ID+G GE F P + +AEV D D C+D+CVYA DG+CDED G +W G + D + S + GY G L C GTDCTDCG A D C NTC FARDG CDD R LC XXXXXX P SNFT+
Sbjct: 620 LQLTPTKSSDFEIVSN--TDTVITLKLK--PGKKWAGV-GHDKTTQLKIKAIDSGAGEEQFKPP--IEIAEVHSDLDDDEKGQCDDTCVYALDGECDEDGRGTYYGSWYNEMYGGLEDDDYYSSYXXXXXTSDYGYYGXXXXXXXXXXXXTLNGLAPCDPGTDCTDCGGLRAGDSAPECENTCMFARDGYCDDPRGNDLCKXXXXXXXXXPRSASNFTD 831
BLAST of mRNA_Ecto-sp6_S_contig84.17574.1 vs. uniprot
Match: A0A7S2SQB8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQB8_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 6.060e-17 Identity = 86/231 (37.23%), Postives = 105/231 (45.45%), Query Frame = 1
Query: 1 LVLSPTLVGDYEIKEQGWTDETVTISLSIDPGAMWANVRADDQTVEVKVVSIDTGGGEIFMPGGGVVVAEVRKDDATFNCEDSCVYANDGQCDEDRDGVEAVNWSGAMTDSNGESESFTSQASGSRGYLGSSAMPGEDSDDLVLVNSPSCPLGTDCTDCGLELAEDGR--CTNTCRFARDGVCDDRRAVGLCADGXXXXXXGPWGQSNFTEAIEYAISFSDAYDDDGFLAD 687
L LSPT YE+ T+ I L + G WA V + ++V V V +DTG GE+ MPG GVVVA++ D +C+DSC +A DG CD D G W D G Y G DD L P C GTDCTDCG D C N+C++A DG CDD R XXXXXX P SNF+ +DDDG+ D
Sbjct: 580 LTLSPTKPSAYEVDSLDPTE----IILKLLEGEKWAEVE-EGKSVHVYVTKVDTGAGEVIMPGDGVVVAKIESDLDDNHCDDSCEWALDGMCD-DGSGSGRYWWD---DDYGGFYGXXXXXYGYGYYYYG---------DDEFLA--PVCDEGTDCTDCGGPKTSDQLVDCDNSCQWANDGFCDDSRTXXXXXXXXXXXXXXPTSSSNFS-----------TWDDDGWWDD 779
BLAST of mRNA_Ecto-sp6_S_contig84.17574.1 vs. uniprot
Match: A0A6U1PF74_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PF74_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 4.860e-14 Identity = 73/210 (34.76%), Postives = 99/210 (47.14%), Query Frame = 1
Query: 7 LSPTLVGDYEIKEQGWTDETVTISLSIDPGAMWANVRADDQTVEVKVVSIDTGGGEI-FMPGGGVVVAEVR----KDDATFNCEDSCVYANDGQCDE-DRDGVE-AVNWSGAMTDSNGESESFTSQ---------------ASGSRGYLGSSAMPGEDSDDLVLVNSPSCPLGTDCTDCG-LELAEDGRCTNTCRFARDGVCDDRRAVGL 567
L PT DYE+ + +++ V + L G WA+V A + TV +KVVSID+G GE + P + VA+ +D C+DSC+YA DG+CD+ + D V+ W GE + + A G GY G D L + +C GTDCTDCG + E C NTCRF+RD CDD R L
Sbjct: 48 LDPTPASDYEVLAK--SEKLVLLGLK--EGKKWADVPAGE-TVPIKVVSIDSGAGEEQYNPPVQIAVAQADPSEDEDAHPGQCDDSCIYAFDGECDDPENDHVDHGFEW--------GEDDDYFYDYDDSDLYXXXXXFYYAGGGYGYYGY--------DTLNYI--AACDPGTDCTDCGGFGVTEATECDNTCRFSRDDYCDDPRGNDL 234
BLAST of mRNA_Ecto-sp6_S_contig84.17574.1 vs. uniprot
Match: A0A7S3XT65_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT65_HETAK) HSP 1 Score: 82.8 bits (203), Expect = 2.120e-12 Identity = 61/168 (36.31%), Postives = 80/168 (47.62%), Query Frame = 1
Query: 1 LVLSPTLVGDYEIKEQGWTDETVTISLSIDPGAMWANVRADDQTVEVKVVSIDTGGGEI-FMPGGGVVVAEVRKD---DATFNCEDSCVYANDGQCDEDRDGVEAVNWS----GAMTDSNGESESFTSQASGSRGYLGSSAMPGEDSDDLVLVNSPSCPLGTDCTDCG 480
L L+PT D+EI TD +T+ L PG WA V D+T ++K+ +ID+G GE F P + +AEV D D C+D+CVYA DG+CDED G +W G + D + S + GY G L C GTDCTDCG
Sbjct: 620 LQLTPTKSSDFEIVSN--TDTVITLKLK--PGKKWAGV-GHDKTTQLKIKAIDSGAGEEQFKPP--IEIAEVHSDLDDDEKGQCDDTCVYALDGECDEDGRGTYYGSWYNEMYGGLEDDDYYSSYXXXXXTSDYGYYGXXXXXXXXXXXXTLNGLAPCDPGTDCTDCG 780 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig84.17574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig84.17574.1 >prot_Ecto-sp6_S_contig84.17574.1 ID=prot_Ecto-sp6_S_contig84.17574.1|Name=mRNA_Ecto-sp6_S_contig84.17574.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=283bp MWANVRADDQTVEVKVVSIDTGGGEIFMPGGGVVVAEVRKDDATFNCEDSback to top mRNA from alignment at Ecto-sp6_S_contig84:210918..220257- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig84.17574.1 ID=mRNA_Ecto-sp6_S_contig84.17574.1|Name=mRNA_Ecto-sp6_S_contig84.17574.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9340bp|location=Sequence derived from alignment at Ecto-sp6_S_contig84:210918..220257- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig84:210918..220257- >mRNA_Ecto-sp6_S_contig84.17574.1 ID=mRNA_Ecto-sp6_S_contig84.17574.1|Name=mRNA_Ecto-sp6_S_contig84.17574.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=849bp|location=Sequence derived from alignment at Ecto-sp6_S_contig84:210918..220257- (Ectocarpus species6 EcLAC_371)back to top |