prot_Ecto-sp6_S_contig82.17424.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig82.17424.1
Unique Nameprot_Ecto-sp6_S_contig82.17424.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length290
Homology
BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: D7FZH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZH3_ECTSI)

HSP 1 Score: 545 bits (1403), Expect = 2.840e-195
Identity = 274/289 (94.81%), Postives = 278/289 (96.19%), Query Frame = 0
Query:    1 MGRMSALMMCLPVALSALAFSTTTGDALVSSAGAGRWSGGHGRHRLQSRSSGWHRVAVLGKVETTMINAAEAFPADASRFQAGGASGGGVEDAGKIKGGRVSRIWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFLDRMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSKWCR 289
            MGRMSAL MCL VALSALAFSTTTGDALVSSAGAGRWSGGH RH LQSRSSGWHR A LGKVETTM NAAEA PADASRFQAGGASGGGVEDAGKIKG  VSR+WGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDW+AFTLVGAVFIGTVLHHWYGFL+RMGNSE ITSRIKSKWGR+VLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSKWCR
Sbjct:    1 MGRMSALRMCLLVALSALAFSTTTGDALVSSAGAGRWSGGHCRHHLQSRSSGWHRAAALGKVETTMTNAAEALPADASRFQAGGASGGGVEDAGKIKGRGVSRMWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWSAFTLVGAVFIGTVLHHWYGFLERMGNSEVITSRIKSKWGRVVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSKWCR 289          
BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: A0A6H5L3N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3N7_9PHAE)

HSP 1 Score: 268 bits (685), Expect = 1.200e-85
Identity = 151/299 (50.50%), Postives = 191/299 (63.88%), Query Frame = 0
Query:    9 MCLPVALSALAFSTTTGDALVSSAGAGRWSGGHGRHRLQSRSSGWHRVAVLGKV----ETTMINAAEAFPADASRFQAGGA---SGGGV-----------EDAGKIKGGRVSRIWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFLDRMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSKWCR 289
            M +P+ L+AL  ST + +A  +SAG  R      RH L    +G HR A L  V      T+ +  +     ASR     A    GG +           ED G+    R+S +WGRYL AL ++PLLTK+LSSGV+SGTAN+IEQTLS A F+   W  F+L G VF G  LH+WY  LDR+GN++A+TSR+  KWGR+  QV++D  IGA+L+N GYFA H +  +  TGR FPLP LG  IVEK+ SRY VMM+ N R+WP V F+NFAF+P DLRVLVSNFVAV WGYL+SKWCR
Sbjct:   26 MLVPLGLTALVLSTAS-EAFFTSAG--RLRASSQRHLLLPSCAGRHRGAALDTVAKMANVTVGDCVDPMLPCASRVALPNALQTRGGTISSSSSNSSVVAEDKGRSARRRLSVVWGRYLGALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFNWEGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVLVDTIIGATLLNCGYFAVHEIFSSITTGRLFPLPGLGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPDLRVLVSNFVAVFWGYLLSKWCR 321          
BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: D7FZH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH5_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 2.320e-76
Identity = 119/214 (55.61%), Postives = 145/214 (67.76%), Query Frame = 0
Query:  100 RVSRIWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFLDRM------------------------GNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSKWCR 289
            R S +WGRYL+AL ++PLLTK+LSSGV+SGTAN+IEQTLS A F    W  F+L G VF G  LH+WY  LDR                         GN++ +TSR+  KWGR+  Q ++D  IGA+L+N GYFA H +  A  TGR FPLPELG  IV+K+ SRY VMM+ N R+WP V F+NFAF+P DLRVLVSNFVAV WGYL+SKWCR
Sbjct:   58 RFSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRALACCTRWPSLPLLLRGVKSHGQVEGNAKGVTSRVPGKWGRVSFQGMVDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVKKIASRYSVMMVANCRVWPPVVFLNFAFVPPDLRVLVSNFVAVFWGYLLSKWCR 271          
BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: A0A835YMP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP8_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.730e-38
Identity = 73/194 (37.63%), Postives = 114/194 (58.76%), Query Frame = 0
Query:   99 GRVSRIWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLS------PAAFSLVDWTAFTLVGAVFIG-TVLHHWYGFLDRMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMS 285
            G   ++W +YL  L+ RPL+TK+ +S +I    + I Q L       P  F     TA  +  AV IG T +H+WY FLD+     A  + +K KW R+  Q+ +DQT+G +++N+G++  HT+  A + GR FPL  L  +I  K++     M++NN++LWP  +F+NF+ +P  LRVL +NFVA+ W   +S
Sbjct:   70 GAPQQLWNKYLGQLDRRPLITKAWTSTIIGCIGDTIAQVLEARTKGIPFVFD-TQRTAIYIFCAVAIGSTAVHYWYNFLDQ---KVANPNTVKGKWNRVFRQLAVDQTVGCTVLNAGFYIVHTIVSAVVMGRVFPLGALADTITGKLSREMWPMLINNWKLWPAANFINFSLVPPQLRVLFANFVAIFWNIYLS 259          
BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: D7G6L5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L5_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 3.830e-21
Identity = 72/222 (32.43%), Postives = 110/222 (49.55%), Query Frame = 0
Query:   86 SGGGVEDAGKIKGGRVSRIWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTAFTL-----------------VGAVFIGTVLHHWYGFL-----DRMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMS 285
            +GG V ++G   GG    +   YL AL+ +P++TK ++SGVI G  +++ Q L   AF      +FTL                 +GA++I  V+H+W+  L     D+   + A       +  + +  V LDQTIGA L+N+G+    T   A LT  A  + E G      V +     M+  ++LWP  + +NFAF+PA LRVL  NFV + W   +S
Sbjct:   76 NGGLVVESGNKNGG--DGLLASYLRALDTKPIITKVVTSGVICGIGDIMAQAL---AFKTAATESFTLGSFLAALEFKRLAIYGVLGALWIAPVVHYWFDALEAATKDKKAVAGAPAPSFAMRMFKALKMVTLDQTIGAPLINAGFMFLFTFATA-LTSGAGGI-ESGKKAGTMVKNGIWSTMLVCWKLWPIANMINFAFVPAKLRVLFLNFVGLGWNIYLS 290          
BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: A0A250XQU6_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XQU6_9CHLO)

HSP 1 Score: 97.8 bits (242), Expect = 1.760e-20
Identity = 56/183 (30.60%), Postives = 94/183 (51.37%), Query Frame = 0
Query:  105 WGRYLHALENRPLLTKSLSSGVISGTANLIEQT-LSPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFLDRMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTG-RAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMS 285
            W +YL  LE+ P +T++++ GV++G  +++ Q  +  ++F L     FT +G  F+G VL +WYG+L  +       S + S        + LDQ + A    + + +  TV + G T  +   L  L +SI  K+   +   +  N+ LW    F+NF F+P +LRVL  N  A++W   MS
Sbjct:   68 WAKYLELLESHPFVTRAVTCGVLNGLGDIVSQVFIEGSSFELSRTLTFTCLGLFFVGPVLFYWYGWLGGLIPGSGAMSVLGS--------LALDQLLFAPPFIAAFMSILTVTIEGPTHLKDGSLQTLKNSIASKIQKDWPPAVQVNWLLWVPAQFINFKFVPPNLRVLAVNVTALIWNIYMS 242          
BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: F0Y6G4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6G4_AURAN)

HSP 1 Score: 97.1 bits (240), Expect = 2.220e-20
Identity = 60/190 (31.58%), Postives = 96/190 (50.53%), Query Frame = 0
Query:  103 RIWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFL---DRMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVE----KVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMS 285
            R+   Y   L   PL TK  SSG+ S   + + Q ++  AF      +F LVGA +   +LH WY  L   +R   ++ +      +W  ++LQ++L+Q++GA  VN+G+F    V    L        +L    +E     +  +Y+++M  N+ +WP  S VN AF+P   RVL  N VAV+W  ++S
Sbjct:   47 RLVAWYDAQLRRHPLRTKVASSGLASAVGDAVAQAVTGGAFDARRCASFALVGAAYFAPILHGWYEVLAARERRWRADGM-----GRWPSVLLQLLLNQSLGALTVNAGFFFALAVAEDALA------LDLSVRTLEGARRALGDQYLLVMRANWLVWPLPSLVNLAFVPLRYRVLFMNAVAVVWKTILS 225          
BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: A0A7S1XPH0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPH0_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.840e-20
Identity = 55/190 (28.95%), Postives = 97/190 (51.05%), Query Frame = 0
Query:  100 RVSRIWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFLDRMGNSEAITSRIKSKWG---RIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSK 286
            R SR+W  Y+  LE RP+  K  ++  +   ++L+ Q L+PA F+L  + AF    A F+   LH+ +   + +GN      +++ ++G   + +  V +DQT+GA    + +F   T       G  FP   +      KVT      ++ N+++WP  +F+NF F+P  LR+  +N VA  +G ++S 
Sbjct:  108 RASRLWRGYVRRLEARPIPMKVATAMCLMCISDLVSQALTPAPFNLPRFLAFVTTQAFFMTPCLHYQFAMFEAIGN------KVERRFGTDAKPLAMVAVDQTLGALFAFTAFFLIFTFWDNAFRG--FPEGGVLGKAWAKVTGTLWSALLANWKIWPLANFINFKFVPLQLRIPFANLVACCFGIILSS 289          
BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: S8BUL5_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8BUL5_9LAMI)

HSP 1 Score: 95.1 bits (235), Expect = 8.590e-20
Identity = 68/222 (30.63%), Postives = 108/222 (48.65%), Query Frame = 0
Query:   79 RFQAGGASGGGVEDAGKIKGGRV----------SRIWGR---YLHALENRPLLTKSLSSGVISGTANLIEQTLSPAA--FSLVDWTAFTLVGAVFIGTVLHHWYGFLDRMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMS 285
            R  +GG S GG   +GK  GG               W     YL  L   P++TK+L++ V++   +LI Q +        L   + FTL+G +++G  LHHWY +L     S+AIT+   S     + +++LDQ   A L   G+F    + L G            S +V K+   +   ++ N++LW    F+NF F+P   +VLV+NFVA++W  ++S
Sbjct:    7 RLSSGGVSSGGFGGSGKFNGGXXXXXXXXXXDNENSWSLLSWYLSLLGKHPVMTKALTAAVLTLVGDLICQLVIDRVTELDLKRTSIFTLLGLIYVGPALHHWYLYL-----SKAITASGNSG---AIFRLLLDQFCFAPLFI-GFFLSSLMTLEGKP----------SQVVPKLQQEWFSSLVANWQLWIPFQFLNFRFVPQQFQVLVANFVALIWNVILS 209          
BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: A0A7S1CGT8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CGT8_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.240e-19
Identity = 62/183 (33.88%), Postives = 96/183 (52.46%), Query Frame = 0
Query:  104 IWGRYLHALENRPLLTKSLSSGVISGTANLIEQTL-SPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFLDRMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMS 285
            +W RY   LE RP+LTKSL+S VI+   ++  QT     +F +V +  F+++G V +G  LH WYG L+R+     +T+  K+  GR+ L    DQ + A      + A     L  + GR +        ++E V     V    N+ LWP  +F+NF F+P   +VL +NFVA++W   +S
Sbjct:  108 LWERYAELLETRPILTKSLTSLVITAIGDIACQTFFGDGSFDIVRFAQFSILGGVLVGPGLHFWYGTLNRL--IPGVTT--KAVLGRLAL----DQLVWAP----PFIAVFMGTLKTMQGRPY------DDLLEIVWESCKV----NWMLWPAANFINFKFVPGQYQVLFANFVALIWNTYLS 268          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZH3_ECTSI2.840e-19594.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L3N7_9PHAE1.200e-8550.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZH5_ECTSI2.320e-7655.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YMP8_9STRA1.730e-3837.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G6L5_ECTSI3.830e-2132.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A250XQU6_9CHLO1.760e-2030.60Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
F0Y6G4_AURAN2.220e-2031.58Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1XPH0_9STRA3.840e-2028.95Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
S8BUL5_9LAMI8.590e-2030.63Uncharacterized protein (Fragment) n=1 Tax=Genlise... [more]
A0A7S1CGT8_9STRA3.240e-1933.88Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 233..285
e-value: 1.5E-13
score: 50.8
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 85..284
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..169
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..189
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 284..289
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 255..283
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 190..211
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 212..254
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.705
NoneNo IPR availableTMHMMTMhelixcoord: 250..272
NoneNo IPR availableTMHMMTMhelixcoord: 148..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig82contigEcto-sp6_S_contig82:328902..333312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig82.17424.1mRNA_Ecto-sp6_S_contig82.17424.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig82 328902..334164 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig82.17424.1 ID=prot_Ecto-sp6_S_contig82.17424.1|Name=mRNA_Ecto-sp6_S_contig82.17424.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=290bp
MGRMSALMMCLPVALSALAFSTTTGDALVSSAGAGRWSGGHGRHRLQSRS
SGWHRVAVLGKVETTMINAAEAFPADASRFQAGGASGGGVEDAGKIKGGR
VSRIWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTA
FTLVGAVFIGTVLHHWYGFLDRMGNSEAITSRIKSKWGRIVLQVVLDQTI
GASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNF
RLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSKWCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22