mRNA_Ecto-sp6_S_contig82.17424.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig82.17424.1
Unique NamemRNA_Ecto-sp6_S_contig82.17424.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: D7FZH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZH3_ECTSI)

HSP 1 Score: 544 bits (1401), Expect = 2.730e-190
Identity = 274/289 (94.81%), Postives = 278/289 (96.19%), Query Frame = 1 
Query:    1 MGRMSALMMCLPVALSALAFSTTTGDALVSSAGAGRWSGGHGRHRLQSRSSGWHRVAVLGKVETTMINAAEAFPADASRFQAGGASGGGVEDAGKIKGGRVSRIWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFLDRMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSKWCR 867
            MGRMSAL MCL VALSALAFSTTTGDALVSSAGAGRWSGGH RH LQSRSSGWHR A LGKVETTM NAAEA PADASRFQAGGASGGGVEDAGKIKG  VSR+WGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDW+AFTLVGAVFIGTVLHHWYGFL+RMGNSE ITSRIKSKWGR+VLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSKWCR
Sbjct:    1 MGRMSALRMCLLVALSALAFSTTTGDALVSSAGAGRWSGGHCRHHLQSRSSGWHRAAALGKVETTMTNAAEALPADASRFQAGGASGGGVEDAGKIKGRGVSRMWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWSAFTLVGAVFIGTVLHHWYGFLERMGNSEVITSRIKSKWGRVVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSKWCR 289
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BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: A0A6H5L3N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3N7_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 1.570e-81
Identity = 151/299 (50.50%), Postives = 191/299 (63.88%), Query Frame = 1 
Query:   25 MCLPVALSALAFSTTTGDALVSSAGAGRWSGGHGRHRLQSRSSGWHRVAVLGKV----ETTMINAAEAFPADASRFQAGGA---SGGGV-----------EDAGKIKGGRVSRIWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFLDRMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSKWCR 867
            M +P+ L+AL  ST + +A  +SAG  R      RH L    +G HR A L  V      T+ +  +     ASR     A    GG +           ED G+    R+S +WGRYL AL ++PLLTK+LSSGV+SGTAN+IEQTLS A F+   W  F+L G VF G  LH+WY  LDR+GN++A+TSR+  KWGR+  QV++D  IGA+L+N GYFA H +  +  TGR FPLP LG  IVEK+ SRY VMM+ N R+WP V F+NFAF+P DLRVLVSNFVAV WGYL+SKWCR
Sbjct:   26 MLVPLGLTALVLSTAS-EAFFTSAG--RLRASSQRHLLLPSCAGRHRGAALDTVAKMANVTVGDCVDPMLPCASRVALPNALQTRGGTISSSSSNSSVVAEDKGRSARRRLSVVWGRYLGALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFNWEGWVVFSLTGIVFKGMFLHYWYNILDRLGNAKAVTSRVPGKWGRVSFQVLVDTIIGATLLNCGYFAVHEIFSSITTGRLFPLPGLGLRIVEKIASRYSVMMVANCRVWPPVVFLNFAFVPPDLRVLVSNFVAVFWGYLLSKWCR 321
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BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: D7FZH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH5_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 2.000e-72
Identity = 119/214 (55.61%), Postives = 145/214 (67.76%), Query Frame = 1 
Query:  298 RVSRIWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFLDRM------------------------GNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSKWCR 867
            R S +WGRYL+AL ++PLLTK+LSSGV+SGTAN+IEQTLS A F    W  F+L G VF G  LH+WY  LDR                         GN++ +TSR+  KWGR+  Q ++D  IGA+L+N GYFA H +  A  TGR FPLPELG  IV+K+ SRY VMM+ N R+WP V F+NFAF+P DLRVLVSNFVAV WGYL+SKWCR
Sbjct:   58 RFSVVWGRYLNALNDQPLLTKALSSGVVSGTANIIEQTLSAAKFDWGGWVVFSLTGIVFKGMFLHYWYNILDRALACCTRWPSLPLLLRGVKSHGQVEGNAKGVTSRVPGKWGRVSFQGMVDTIIGATLLNCGYFAVHEIFSAITTGRLFPLPELGLRIVKKIASRYSVMMVANCRVWPPVVFLNFAFVPPDLRVLVSNFVAVFWGYLLSKWCR 271
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BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: A0A835YMP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP8_9STRA)

HSP 1 Score: 145 bits (365), Expect = 6.270e-36
Identity = 73/194 (37.63%), Postives = 114/194 (58.76%), Query Frame = 1 
Query:  295 GRVSRIWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLS------PAAFSLVDWTAFTLVGAVFIG-TVLHHWYGFLDRMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMS 855
            G   ++W +YL  L+ RPL+TK+ +S +I    + I Q L       P  F     TA  +  AV IG T +H+WY FLD+     A  + +K KW R+  Q+ +DQT+G +++N+G++  HT+  A + GR FPL  L  +I  K++     M++NN++LWP  +F+NF+ +P  LRVL +NFVA+ W   +S
Sbjct:   70 GAPQQLWNKYLGQLDRRPLITKAWTSTIIGCIGDTIAQVLEARTKGIPFVFD-TQRTAIYIFCAVAIGSTAVHYWYNFLDQ---KVANPNTVKGKWNRVFRQLAVDQTVGCTVLNAGFYIVHTIVSAVVMGRVFPLGALADTITGKLSREMWPMLINNWKLWPAANFINFSLVPPQLRVLFANFVAIFWNIYLS 259
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BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: D7G6L5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L5_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 1.150e-19
Identity = 72/222 (32.43%), Postives = 110/222 (49.55%), Query Frame = 1 
Query:  256 SGGGVEDAGKIKGGRVSRIWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTAFTL-----------------VGAVFIGTVLHHWYGFL-----DRMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMS 855
            +GG V ++G   GG    +   YL AL+ +P++TK ++SGVI G  +++ Q L   AF      +FTL                 +GA++I  V+H+W+  L     D+   + A       +  + +  V LDQTIGA L+N+G+    T   A LT  A  + E G      V +     M+  ++LWP  + +NFAF+PA LRVL  NFV + W   +S
Sbjct:   76 NGGLVVESGNKNGG--DGLLASYLRALDTKPIITKVVTSGVICGIGDIMAQAL---AFKTAATESFTLGSFLAALEFKRLAIYGVLGALWIAPVVHYWFDALEAATKDKKAVAGAPAPSFAMRMFKALKMVTLDQTIGAPLINAGFMFLFTFATA-LTSGAGGI-ESGKKAGTMVKNGIWSTMLVCWKLWPIANMINFAFVPAKLRVLFLNFVGLGWNIYLS 290
[Close]
BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: A0A250XQU6_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XQU6_9CHLO)

HSP 1 Score: 97.4 bits (241), Expect = 4.360e-19
Identity = 56/183 (30.60%), Postives = 94/183 (51.37%), Query Frame = 1 
Query:  313 WGRYLHALENRPLLTKSLSSGVISGTANLIEQT-LSPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFLDRMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTG-RAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMS 855
            W +YL  LE+ P +T++++ GV++G  +++ Q  +  ++F L     FT +G  F+G VL +WYG+L  +       S + S        + LDQ + A    + + +  TV + G T  +   L  L +SI  K+   +   +  N+ LW    F+NF F+P +LRVL  N  A++W   MS
Sbjct:   68 WAKYLELLESHPFVTRAVTCGVLNGLGDIVSQVFIEGSSFELSRTLTFTCLGLFFVGPVLFYWYGWLGGLIPGSGAMSVLGS--------LALDQLLFAPPFIAAFMSILTVTIEGPTHLKDGSLQTLKNSIASKIQKDWPPAVQVNWLLWVPAQFINFKFVPPNLRVLAVNVTALIWNIYMS 242
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BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: F0Y6G4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6G4_AURAN)

HSP 1 Score: 96.7 bits (239), Expect = 5.170e-19
Identity = 60/190 (31.58%), Postives = 96/190 (50.53%), Query Frame = 1 
Query:  307 RIWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFL---DRMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVE----KVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMS 855
            R+   Y   L   PL TK  SSG+ S   + + Q ++  AF      +F LVGA +   +LH WY  L   +R   ++ +      +W  ++LQ++L+Q++GA  VN+G+F    V    L        +L    +E     +  +Y+++M  N+ +WP  S VN AF+P   RVL  N VAV+W  ++S
Sbjct:   47 RLVAWYDAQLRRHPLRTKVASSGLASAVGDAVAQAVTGGAFDARRCASFALVGAAYFAPILHGWYEVLAARERRWRADGM-----GRWPSVLLQLLLNQSLGALTVNAGFFFALAVAEDALA------LDLSVRTLEGARRALGDQYLLVMRANWLVWPLPSLVNLAFVPLRYRVLFMNAVAVVWKTILS 225
[Close]
BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: A0A7S1XPH0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPH0_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 9.830e-19
Identity = 55/190 (28.95%), Postives = 97/190 (51.05%), Query Frame = 1 
Query:  298 RVSRIWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFLDRMGNSEAITSRIKSKWG---RIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSK 858
            R SR+W  Y+  LE RP+  K  ++  +   ++L+ Q L+PA F+L  + AF    A F+   LH+ +   + +GN      +++ ++G   + +  V +DQT+GA    + +F   T       G  FP   +      KVT      ++ N+++WP  +F+NF F+P  LR+  +N VA  +G ++S 
Sbjct:  108 RASRLWRGYVRRLEARPIPMKVATAMCLMCISDLVSQALTPAPFNLPRFLAFVTTQAFFMTPCLHYQFAMFEAIGN------KVERRFGTDAKPLAMVAVDQTLGALFAFTAFFLIFTFWDNAFRG--FPEGGVLGKAWAKVTGTLWSALLANWKIWPLANFINFKFVPLQLRIPFANLVACCFGIILSS 289
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BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: A0A7S1CGT8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CGT8_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.540e-18
Identity = 65/199 (32.66%), Postives = 100/199 (50.25%), Query Frame = 1 
Query:  310 IWGRYLHALENRPLLTKSLSSGVISGTANLIEQTL-SPAAFSLVDWTAFTLVGAVFIGTVLHHWYGFLDRMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSKWCR*ATASTITAVVP 903
            +W RY   LE RP+LTKSL+S VI+   ++  QT     +F +V +  F+++G V +G  LH WYG L+R+     +T+  K+  GR+ L    DQ + A      + A     L  + GR +        ++E V     V    N+ LWP  +F+NF F+P   +VL +NFVA++W   +S       A  + A  P
Sbjct:  108 LWERYAELLETRPILTKSLTSLVITAIGDIACQTFFGDGSFDIVRFAQFSILGGVLVGPGLHFWYGTLNRL--IPGVTT--KAVLGRLAL----DQLVWAP----PFIAVFMGTLKTMQGRPY------DDLLEIVWESCKV----NWMLWPAANFINFKFVPGQYQVLFANFVALIWNTYLSYAGNKPAAEAVEAETP 284
[Close]
BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Match: S8BUL5_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8BUL5_9LAMI)

HSP 1 Score: 94.7 bits (234), Expect = 1.760e-18
Identity = 68/222 (30.63%), Postives = 108/222 (48.65%), Query Frame = 1 
Query:  235 RFQAGGASGGGVEDAGKIKGGRV----------SRIWGR---YLHALENRPLLTKSLSSGVISGTANLIEQTLSPAA--FSLVDWTAFTLVGAVFIGTVLHHWYGFLDRMGNSEAITSRIKSKWGRIVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMS 855
            R  +GG S GG   +GK  GG               W     YL  L   P++TK+L++ V++   +LI Q +        L   + FTL+G +++G  LHHWY +L     S+AIT+   S     + +++LDQ   A L   G+F    + L G            S +V K+   +   ++ N++LW    F+NF F+P   +VLV+NFVA++W  ++S
Sbjct:    7 RLSSGGVSSGGFGGSGKFNGGXXXXXXXXXXDNENSWSLLSWYLSLLGKHPVMTKALTAAVLTLVGDLICQLVIDRVTELDLKRTSIFTLLGLIYVGPALHHWYLYL-----SKAITASGNSG---AIFRLLLDQFCFAPLFI-GFFLSSLMTLEGKP----------SQVVPKLQQEWFSSLVANWQLWIPFQFLNFRFVPQQFQVLVANFVALIWNVILS 209
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZH3_ECTSI2.730e-19094.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L3N7_9PHAE1.570e-8150.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZH5_ECTSI2.000e-7255.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YMP8_9STRA6.270e-3637.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G6L5_ECTSI1.150e-1932.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A250XQU6_9CHLO4.360e-1930.60Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
F0Y6G4_AURAN5.170e-1931.58Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1XPH0_9STRA9.830e-1928.95Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1CGT8_9STRA1.540e-1832.66Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
S8BUL5_9LAMI1.760e-1830.63Uncharacterized protein (Fragment) n=1 Tax=Genlise... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig82contigEcto-sp6_S_contig82:328902..334164 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score548.5
Seed ortholog evalue1.9e-153
Seed eggNOG ortholog2880.D7FZH3
Model size1722
KEGG koko:K13348
KEGG Pathwayko04146,map04146
Hectar predicted targeting categorychloroplast
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
Exons6
EggNOG free text desc.Belongs to the peroxisomal membrane protein PXMP2 4 family
EggNOG OGsKOG1944@1,KOG1944@2759
Ec32 ortholog descriptionMpv17/PMP22
Ec32 orthologEc-23_002850.1
Cds size870
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig82.17424.1prot_Ecto-sp6_S_contig82.17424.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig82 328902..333312 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350455.7307737-CDS-Ecto-sp6_S_contig82:328901..3290561682350455.7307737-CDS-Ecto-sp6_S_contig82:328901..329056Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 328902..329056 +
1682350455.7401838-CDS-Ecto-sp6_S_contig82:329315..3293711682350455.7401838-CDS-Ecto-sp6_S_contig82:329315..329371Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 329316..329371 +
1682350455.7506554-CDS-Ecto-sp6_S_contig82:330444..3306621682350455.7506554-CDS-Ecto-sp6_S_contig82:330444..330662Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 330445..330662 +
1682350455.758244-CDS-Ecto-sp6_S_contig82:330844..3309301682350455.758244-CDS-Ecto-sp6_S_contig82:330844..330930Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 330845..330930 +
1682350455.7661183-CDS-Ecto-sp6_S_contig82:332301..3324971682350455.7661183-CDS-Ecto-sp6_S_contig82:332301..332497Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 332302..332497 +
1682350455.7742956-CDS-Ecto-sp6_S_contig82:333153..3333121682350455.7742956-CDS-Ecto-sp6_S_contig82:333153..333312Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig82 333154..333312 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350455.782574-UTR-Ecto-sp6_S_contig82:333312..3341641682350455.782574-UTR-Ecto-sp6_S_contig82:333312..334164Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig82 333313..334164 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig82.17424.1

>prot_Ecto-sp6_S_contig82.17424.1 ID=prot_Ecto-sp6_S_contig82.17424.1|Name=mRNA_Ecto-sp6_S_contig82.17424.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=290bp
MGRMSALMMCLPVALSALAFSTTTGDALVSSAGAGRWSGGHGRHRLQSRS
SGWHRVAVLGKVETTMINAAEAFPADASRFQAGGASGGGVEDAGKIKGGR
VSRIWGRYLHALENRPLLTKSLSSGVISGTANLIEQTLSPAAFSLVDWTA
FTLVGAVFIGTVLHHWYGFLDRMGNSEAITSRIKSKWGRIVLQVVLDQTI
GASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNF
RLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSKWCR*
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mRNA from alignment at Ecto-sp6_S_contig82:328902..334164+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig82.17424.1 ID=mRNA_Ecto-sp6_S_contig82.17424.1|Name=mRNA_Ecto-sp6_S_contig82.17424.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5263bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:328902..334164+ (Ectocarpus species6 EcLAC_371)
ATGGGGAGGATGTCGGCCCTCATGATGTGTCTTCCTGTAGCATTGAGCGC
CCTCGCCTTCTCCACGACAACAGGGGATGCCTTGGTCTCCTCCGCAGGAG
CAGGGCGTTGGAGCGGTGGGCATGGTCGACACCGCCTGCAATCGCGTTCT
TCAGGGTGTGTAACCTCAGCCATCTTAGCCATCTTCGAAATGGCTAGTTT
AGCTCGCAGAAGCGCCCGTGTCGTAGTACGCTGCATTTGAACCCGGGTAC
AGTATCTACAGCTGTACCTTGCGCAGGATGCGGTGCCATGCACTCGCAAC
AGCTAGCCTCATGCTAATAAGCAGACCTGCGAATCATCAGCCTATTCCGC
CTGATATTCCATTGCATTACTTACTCTCCCCGCGGATATGGAACTCCTGT
CGTGGTGGCAACAGGTGGCACAGGGTTGCGGTGCTGGGCAAGGTGGAGAC
AACCATGATCAACGCAGCAGGTGCGATATTCTCTCTTTGCATTCGTGCCT
CTCGCCTCAAATCTAAGGATGTGCTTCAGTCAGTAGCATCGGCGGCTCTA
CTGTAGCCGACCAAACACTGAAAATATATTGTTCTACATCTCTTTGGCTA
CATTATGCTGCAGTGGTATGGCGGAACAACAGCAGTGGTCAATATTTTCT
AGCCCACGTGCCCCCCAGATGGGGAGGCCAAGCCAGGGAGGGGACACACT
CGACCCTGACAACATGTATGGTGGGAAAACATCACATAACCTTATGCAAG
CACTTGCTGTGTTTGTTCAGATGCATGTCATTGACCGACGCCCACAGTGC
GTTCGGAAAGGGAGGGAGAGAGAGAGAGAGAGAGCGGGCGCCTCTGTCCC
TTTCACTGGGTAAAGCGGCACAAAAAAACATGGTGCCCCCCCCCCCATTT
CTTTTCCCTCTACAAACTGCTTTTGAGCGCTTAGGCACATAGTTAGTTGC
TCAGGGGAGTGGCCTGACATGTACCTCTCGTTTATGCATATGCGTGTGCT
CGTTTTGCAACACCAGCAGCCCACACAGTATTTACACACAGCGGCAGTCG
CACACACTACAACACGAATGGCAGGCGAAGCGAGTCGTAACTGGTATGCC
TTGAGTTAGATGCTGTCGACCAGCCCACATTTGAATTGTTTTTTTTTTAC
TCGGTGGCCGACAATTTCTTAACTTGAATTACGACCAGAACCAGATTGGC
AACACGGAATGCTGGCTCCAGACGGAGACTTGGCGCTTTATTATTTTTCA
CACCTCTCTCAAGACCATACTCTAGCGATTACACGGTTGGGAATCTTGAT
CACCATCCTCGAAGTTCGAAAACATACGCAGCCCGCGACTCTCTCTCTCG
CTCTCTCTCTTTCTGCCTCTCGCTCTCTCCATCGCTTGGTTTCGATATCT
GTAGAGCGCATTGTCATGCCGCTGTTGACGGCATAGCCGTCCCGGTTCTG
CTTACGTGAGATTGAGTTTCCTGTTGTCCCTTGTCTACTTCTAGCGTGGT
CGACGCTCCCGTTATTCCATCCATCTTCGTGTGTACCACGCAGAAGCCTT
TCCCGCCGACGCATCACGGTTCCAAGCTGGCGGCGCTAGCGGCGGCGGCG
TTGAGGATGCGGGCAAAATCAAGGGAGGGAGGGTTTCAAGGATTTGGGGT
CGGTACCTCCACGCCCTCGAAAATAGACCGCTGCTGACCAAGTCTCTGTC
ATCCGGGGTCATCTCGGGCACGGCCAACCTGATCGAGCAAACCCTCAGCC
CGGCCGCTTTCGTGAGTGTTGGGGACGCTGCACTCGTGCTGTTGAATTTT
GGGTGCACCAATCAAGAGTGATGCCCATGTTGGGTATCGCTATCTGATTA
GCCAGAGAGATGTGCGGAAGGCACGCTCGTTGGGTGACACGTGTCTTCCG
TTCCTACTCTTTTGGGTGTGTTGTTCGTGGCGACCAATGGCAGAGCTTGG
TGGATTGGACCGCGTTCACCCTCGTCGGCGCGGTCTTCATCGGGACGGTC
TTGCACCACTGGTACGGCTTCCTCGACAGGTGAGCCGCGATTTGGTCTTC
AGGCGAAAGCCCCAAGCACCTGAGGTGCTGTAGTGTGACACGCCACCACG
CGAATGTATGAGCACCATGATATACTTGGCTATTTCAACATTGTTGACGA
GTTGGTGTGACTATTGTTGTCTTGGTAATCCAACTTATCCTGTCCTCTGA
ACTTGGGCACTCTTCCATGGCACACACGCGATTTTCTGTGGTCGTGGGAT
ACGGTACACAAGGAGGGAATTCACGAATCGAATATTAACTGTGCAAGAGG
ACACGCCACAAGGCCATGCCGCTCGCAAGTCGGAGATATAATATTTCTCC
TATTCCTTTCGTGAGCGGATCTACATTTTAATAGTTGCTGGCCATGAGGG
ACCACCTCGAAACGCATCCATGGTTGGCTATTTACGGGTACAATACAGGG
TCCTGACAGAGGCGATGCAGCCAACTCATCTTCAAACACCCGTACACTCA
ACTATACTCCTGTCCATTTCAGTCACGACGGACTCCTGCTGATGGCATTC
TGTAGACAACAAGCACAGGACACGGCTGTATCTCGTCCTACGGTACTCCC
AAGAGAAAAGCCTGCATGTTTTTAGCCAGAAAGCGCATTGTATTATGCCA
CACATGTATAAGGCAACGAAGCAAGGAACTGCTGAACCCTTTCCTCGCGT
TAGCAGTTGAAAGCAAGCACTGCAGGGGGGAGCATGGAGAACGAAAAAAA
AAACGTGTTTACTTTCCTCTTGTGAAGCCCCCGCGGGGGAGCCAAACATG
TTCCGAAAAGCGCCAGACAGGCGCCCCATAATCAAAAACGCGCGTGCACA
CGTACACACGCACACTCCCGTGCTTTCAGGATTCCGACATGTACACACGC
ACACTCCCGTGCTTTCAGGATTCCGAAATGCTTTGCCGTTTCGTACGTGC
CCGACTGTAGAAGACGGGTCGCTGGGCTGTAGCGTAACTCGGGCCAGCCC
AGACCCACCTGCAGGAAACGCTGACTCCTAGGGACTCCCCCTGCGCGATT
CACTGACGTCAGATTGGTCTGCACGCCTACCGATAGAAACCTCGGACAGC
GGGGGGGGAAACATCTCTGTTTTTTCGCGCTGTCTGACTCGCGCTCGTCT
ATGTGGCCCAATGAAATGCATGAACCGATGGAGTCGATGACTCGGAACTT
GCAACACGGTGCTTCAATTGATTATGGTCAAACAACCAGTTTTTTTTCTG
TTTTCAAGCACGTGTGAACCCTGTGGGATTGTCAGACTGCCCCGCTCCTA
CGGATGCTCAATGCACGGGATGGTCAGACCTCCTCCGCTCGAGAGAAGTC
CTGCCTCTTGAGTTTTTTGCCCCTCCCGTGTCCCTCGTTGCCCCTCGCAG
GATGGGAAACTCTGAGGCGATCACGTCCAGGATAAAGAGCAAGTGGGGGC
GGATTGTGTTGCAGGTGGTGCTTGACCAGACTATCGGTGCCTCTCTCGTG
AACAGCGGCTACTTCGCTTGCCACACGGTCTGTTTGGCCGGTCTCACAGG
GAGAGCGTTCCCGCTTCCGGAGCTGGGTTCGTCTATTGTAGAGAAGGTGC
GTTGTTCTTCTATGCATTCATACTTCGTTCTTTTTGGAGCCAAACCGGAG
AACAAAACAACGCGGATTTTCAGAACAGCCGGTTTAGTCCGCTCTGACGT
GTTCCACGTCTTTGGCCGCGTTGGCCTGGCCAGCTGCAGAACGCTGCTGT
GTTTTTGGCCCTTGATACGTTGAAGGCGTGTTCTCGCGGGGACATCGTGC
CTCCAACGGCGCTGAGCCCAGACGATCGTCCTCGGCGACTTCTCTGTAAA
CCTCTGGGGGGTGTTTGGTATAGACGCTCTCGTTTCACATTACCTTGTGA
AGAACAATCGAATGCGTTCTTCCTTTACGGTCGACACTACTGAATGTCGC
CGACCCCTCTGAGGGCAACCGTTCAAACTCCAAAGACAGCTAACGCGTGT
TCGAAGACGACAGTCTTCCTACTTTCCGACCTGACAACTCCTCTCCCGCC
GACCATGAGACTTCCCGAACACCGCGCGGCACAGTTCGCACTTGCTGCTG
TTGGGGCGAACGCCCACCTCTATCCAGGCTTGGCGCGGAGACGACGGTCA
ATGTGTGCCCTACACCGGGATGCTTACACTTCACCGAGCACCCCCTCCTG
CGTTCGGTTGCGCGGCGATTGATTTCCGTGCGCCTCTGGTCCGCCCACCC
AGGTGACCAGCAGATACGTGGTGATGATGATGAATAACTTCAGGCTCTGG
CCGTGGGTCAGCTTCGTGAACTTCGCCTTCATCCCGGCAGACCTGCGGGT
GCTGGTGTCGAACTTTGTGGCGGTTCTTTGGGGCTACTTGATGAGCAAGT
GGTGCCGGTGAGCAACGGCATCGACAATTACTGCTGTGGTACCGTAGCCC
TTGGATAACCGCCAGGGGGAATGTGAAAAGCAGTACACGCACACAGACCC
GTACAACACCCCCCCGGGGGGTTTCTCTTGGACGTGTACTCGGTGAAGTT
CGAGGTTGACGGGTAGGACGACGCAACGGGGTTCCCATAACGGCGAAATG
ACGTTTGTTGAAAGCCCGTTGGTGCTTGATGGTTTTTGAATTTGTACTGC
TGTGTTGCGTTTCATTGTTTTTTGGCAAGTGCATTTTTCGCTGGGAGTAG
TTCCGTAATTTTGTAATTCTCTTCGATAGCATAGGTTAGGAAAACTGTGT
TGCGTTCTAGTGGTTTTTTGGCAAGTGTAGTTTTTTCGGCAGATTCGCAA
TTATGTAATTCTCTTTGATAGCATGATAGGTTAGGAAACCGTCGGGGCAG
TCGTCCACATGCGAAAGAATGAACGGATCCTCACGCGTGGTGGTTGGCTT
GTTAACACTAGAATAGTAGCGCGGTTCATTGTACGCAGGCGGCAGGTGTC
TCCTTGGAGATGTAGTTTCTTGTCTGCTGTCTGGGGAATGGTTTCTGTTC
GATACGTCTCCCCCTCATCGTGTTTTTCGGCCGAGTACGTTGCCTATCAC
AACCAAAATAGGATTATTCGCGAGCGTCGGTGTTTTTGTCGTGAATCTCG
TTTTTTGAGTTCAAGGAATGCACTGCCAGAAAATTACTTGGCATTGCTTG
CGGCGTACGGCGGTAGACGACACTTCGGTGTGTAGTATAAATGCACTGCA
CATTGTCAACTACTGAGGGAATACCCCCTGGAATCCGCAACCGCTTCTTT
GCGAAGGACTTCG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig82:328902..334164+

>mRNA_Ecto-sp6_S_contig82.17424.1 ID=mRNA_Ecto-sp6_S_contig82.17424.1|Name=mRNA_Ecto-sp6_S_contig82.17424.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=870bp|location=Sequence derived from alignment at Ecto-sp6_S_contig82:328902..334164+ (Ectocarpus species6 EcLAC_371)
ATGGGGAGGATGTCGGCCCTCATGATGTGTCTTCCTGTAGCATTGAGCGC
CCTCGCCTTCTCCACGACAACAGGGGATGCCTTGGTCTCCTCCGCAGGAG
CAGGGCGTTGGAGCGGTGGGCATGGTCGACACCGCCTGCAATCGCGTTCT
TCAGGGTGGCACAGGGTTGCGGTGCTGGGCAAGGTGGAGACAACCATGAT
CAACGCAGCAGAAGCCTTTCCCGCCGACGCATCACGGTTCCAAGCTGGCG
GCGCTAGCGGCGGCGGCGTTGAGGATGCGGGCAAAATCAAGGGAGGGAGG
GTTTCAAGGATTTGGGGTCGGTACCTCCACGCCCTCGAAAATAGACCGCT
GCTGACCAAGTCTCTGTCATCCGGGGTCATCTCGGGCACGGCCAACCTGA
TCGAGCAAACCCTCAGCCCGGCCGCTTTCAGCTTGGTGGATTGGACCGCG
TTCACCCTCGTCGGCGCGGTCTTCATCGGGACGGTCTTGCACCACTGGTA
CGGCTTCCTCGACAGGATGGGAAACTCTGAGGCGATCACGTCCAGGATAA
AGAGCAAGTGGGGGCGGATTGTGTTGCAGGTGGTGCTTGACCAGACTATC
GGTGCCTCTCTCGTGAACAGCGGCTACTTCGCTTGCCACACGGTCTGTTT
GGCCGGTCTCACAGGGAGAGCGTTCCCGCTTCCGGAGCTGGGTTCGTCTA
TTGTAGAGAAGGTGACCAGCAGATACGTGGTGATGATGATGAATAACTTC
AGGCTCTGGCCGTGGGTCAGCTTCGTGAACTTCGCCTTCATCCCGGCAGA
CCTGCGGGTGCTGGTGTCGAACTTTGTGGCGGTTCTTTGGGGCTACTTGA
TGAGCAAGTGGTGCCGGTGA
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