prot_Ecto-sp6_S_contig11.1230.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig11.1230.1
Unique Nameprot_Ecto-sp6_S_contig11.1230.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length622
Homology
BLAST of mRNA_Ecto-sp6_S_contig11.1230.1 vs. uniprot
Match: D8LAS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAS5_ECTSI)

HSP 1 Score: 602 bits (1551), Expect = 9.690e-210
Identity = 388/435 (89.20%), Postives = 390/435 (89.66%), Query Frame = 0
Query:  187 EGADDVMYSLYWSRLPETDEGACTLASDNTSLRENPNCLFWSACGIGNAADGHTDWVALEANTXXXXXXXXXXXXXXXXXXXMVDSRNITSVYSGTNVSFTSTDYQDCVADPDCTSQLNEDSTIIAIAAAAVTALALLIAGMTLLHKSIANIMRETVTSRSKLYSSGTRALFGNKRSKADGTVHIDDSTPMASPVQPYKGGSSSPFKEARQEQEEGSADSRLLAGQPEKPPNRRSPKRSSVGSSRPPKSPGRPDDDASDHEEGDSSDAGEAGGRNRSVASSPRARKKRGGGSQRAEQDSDEDQDHSRSAPRSDLDNNGRVDGEGKRWRTPVPGRSSFSGGTRTHKSPPASPSSRRESARGRGASPKASRKGYDDDXXXXXXXXXXXXXXXXXXXXXXXXGGWEQQVARSSAMQSKPRRRNPKRYERHDTDEEDEG 621
            EGADDVMYSLYWSRLPETDEGACTLASDNTSLRENPNCLFWSACGIGNAADGHTDWVALEANTXXXXXXXXXXXXXXXXXXXMVDSRNITSVYSGTNVSFTSTDYQDCVADPDCTSQLNEDSTIIAIAAAAVTALALLIAGMTLLHKSIANIMRETVTSRSKLY+SGTRAL  NKRSK DGTVHIDDSTPMASP QPYKGGSSSPFKEARQEQEEGSADSRLLAGQPEK PNRRSPKRSSVGSSRPPKSPGRPDD                                    SQRAE+DSDEDQDHSRSAPRSDLDNNGRVDGEGKRWRTPVPGRSSFSGGTRTHKSPPASPSSRRESARGRGASPKASRKGYDDDXXXXXXXXXXXXXXXXXXXXXXX GGWEQQVARSSAMQSKPRRRN K YER DTDEEDEG
Sbjct:   18 EGADDVMYSLYWSRLPETDEGACTLASDNTSLRENPNCLFWSACGIGNAADGHTDWVALEANTXXXXXXXXXXXXXXXXXXXMVDSRNITSVYSGTNVSFTSTDYQDCVADPDCTSQLNEDSTIIAIAAAAVTALALLIAGMTLLHKSIANIMRETVTSRSKLYASGTRALVSNKRSK-DGTVHIDDSTPMASPAQPYKGGSSSPFKEARQEQEEGSADSRLLAGQPEKTPNRRSPKRSSVGSSRPPKSPGRPDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQRAEKDSDEDQDHSRSAPRSDLDNNGRVDGEGKRWRTPVPGRSSFSGGTRTHKSPPASPSSRRESARGRGASPKASRKGYDDDXXXXXXXXXXXXXXXXXXXXXXXKGGWEQQVARSSAMQSKPRRRNRKGYERRDTDEEDEG 451          
BLAST of mRNA_Ecto-sp6_S_contig11.1230.1 vs. uniprot
Match: D7FXV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV7_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 2.270e-30
Identity = 77/184 (41.85%), Postives = 100/184 (54.35%), Query Frame = 0
Query:  133 EQICFVTAGD--VDTAFDIAVHTTLYDRPTPGNGGQLSAEMHTSGIARVLVNTTENEGADDVMYSLYWSRLPETDEGA---------CTLASDNTSLRENPNCLFWSACGIGNAADGHTDWVALEANTXXXXXXXXXXXXXXXXXXX-MVDSRNITSVYSGTNVSFTSTDYQDCVADPDCTSQL 304
            E   FVTAG+    ++FD+A + TL D P PG  G LSA M TS  A + ++ +E  GA ++ Y LYWS L  T  GA         C + +   SL ENPNCLF SACG+  A++G +DWV L  +T                    M DS NITS Y  +N++FT T+YQ CVAD  C SQ+
Sbjct:   21 EYAVFVTAGNHTSSSSFDLATYNTLSDTPNPGGDGVLSATMRTSNSAAISISASEARGASNLSYRLYWSNLS-TWTGAEDEWEVPSGCVIPTGGLSLLENPNCLFSSACGMYRASEGMSDWVTLPNDTDEYSFEAPVSRGAQYIFNVAMRDSNNITSAYRASNMTFTFTNYQQCVADQGCQSQV 203          
BLAST of mRNA_Ecto-sp6_S_contig11.1230.1 vs. uniprot
Match: A0A6H5KYM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYM0_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 2.050e-26
Identity = 71/187 (37.97%), Postives = 99/187 (52.94%), Query Frame = 0
Query:  130 KFTEQICFVTAGDV--DTAFDIAVHTTLYDRPTPGNGGQLSAEMHTSGIARVLVNTTENEGADDVMYSLYWSRLPETDEGA---------CTLASDNTSLRENPNCLFWSACGIGNAADGHTDWVALEANTXXXXXXXXXXXXXXXXXXX-MVDSRNITSVYSGTNVSFTSTDYQDCVADPDCTSQL 304
            +  E   FVTAG++   ++FD+A +  L D P PG  G LSA M TS  A + ++ ++  GA ++ Y LYWS L  T  GA         C + +   SL ENP+CLF SACG+  A++G  DWV L  +T                    M DS ++TS Y  +N++FT T+ Q CVAD  C SQ+
Sbjct:   40 RANEHAVFVTAGNLTSSSSFDLATYNALSDTPNPGGDGVLSATMPTSNSAAISISASDTSGARNLSYRLYWSDLS-TWTGAEYEWEVTSGCVIPTGGLSLLENPSCLFSSACGMYRASEGMFDWVTLPNDTGEYSFEAPVSRGAQYIFNVAMWDSNDVTSAYRASNMTFTFTNSQQCVADQGCQSQV 225          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig11.1230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LAS5_ECTSI9.690e-21089.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FXV7_ECTSI2.270e-3041.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYM0_9PHAE2.050e-2637.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 332..621
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 310..331
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..309
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..29
score: 6.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.829
NoneNo IPR availableTMHMMTMhelixcoord: 310..332
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig11contigEcto-sp6_S_contig11:592589..597513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig11.1230.1mRNA_Ecto-sp6_S_contig11.1230.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig11 592589..597513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig11.1230.1 ID=prot_Ecto-sp6_S_contig11.1230.1|Name=mRNA_Ecto-sp6_S_contig11.1230.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=622bp
MLAVTRRLVVPVVLTLSLFSTVVLGLASCCVNSTSGADFADDCVCLVDNT
QFSGQVLRAGETRLYHWVLDMDNSGLVSGSVRGNLTFEMMPCNGSASIDI
KSGSPSSWQNLPYFNSSDDYNPAIVTIPAKFTEQICFVTAGDVDTAFDIA
VHTTLYDRPTPGNGGQLSAEMHTSGIARVLVNTTENEGADDVMYSLYWSR
LPETDEGACTLASDNTSLRENPNCLFWSACGIGNAADGHTDWVALEANTG
HVFEVAVDDDSSYLFNVAMVDSRNITSVYSGTNVSFTSTDYQDCVADPDC
TSQLNEDSTIIAIAAAAVTALALLIAGMTLLHKSIANIMRETVTSRSKLY
SSGTRALFGNKRSKADGTVHIDDSTPMASPVQPYKGGSSSPFKEARQEQE
EGSADSRLLAGQPEKPPNRRSPKRSSVGSSRPPKSPGRPDDDASDHEEGD
SSDAGEAGGRNRSVASSPRARKKRGGGSQRAEQDSDEDQDHSRSAPRSDL
DNNGRVDGEGKRWRTPVPGRSSFSGGTRTHKSPPASPSSRRESARGRGAS
PKASRKGYDDDGSDDGGDNEGGRGAGARGRAAGGKGGWEQQVARSSAMQS
KPRRRNPKRYERHDTDEEDEG*
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