mRNA_Ecto-sp6_S_contig11.1211.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp6_S_contig11.1211.1
Unique Name	mRNA_Ecto-sp6_S_contig11.1211.1
Type	mRNA
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)

Homology

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BLAST of mRNA_Ecto-sp6_S_contig11.1211.1 vs. uniprot
Match: A0A6H5J6K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K8_9PHAE)

HSP 1 Score: 1113 bits (2878), Expect = 0.000e+0
Identity = 727/903 (80.51%), Postives = 749/903 (82.95%), Query Frame = 1

Query:  295 QVAAWCSESAGCNVADGSVLVRISANEEPGLGYFVEVTDRNSSVSGRSSFFELLEALGTPSPVAVREYQDEAGGTGVGDMSLALLIVAGVCGVAIIAALLAVCFIMCRRRSAEKMKTADEAHDLELGGVLDRTTPSRSNDFNTSEGRGFSMGNPLKGRSASRSTDGGITSYGASPAGTDGPSSQTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVSATSRSPAAEGAYTPGRSGSFRTPRRTTSNGRDDLRGRHMYDHSVDEGYDGGR------SPRAFVSRSRSVGRSRRPPRGDEFDRGERQLSVTPGRRHSSGISPDGRLSRSPYVLGMRRSKSEGRADDHSQGSARHETVEEDVDASRWEHDGMMPAVGTIERGRRSQRLSMANSRRSKSMHDTSKLGRLDSKGQYDWEDNARSKSATPSRQTYRNGMADIGQEFPSDVSWEELRSTHLRNKSKIRVRKASSLPPSYGDAMDGGAGRNGSPNDRPPPPSYGPRDANNFTSQLSIGIPDGPSPSSFQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGLSPGTRAISARKAARDAQLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMIANDSDEDREVVMSPRSTSSAGGEVEGSSVREKIKVFSGRSESAGSTDKTGRGSPALPRGRSPYARGLARGWSQADEEEVKARAEESSANAKEALALMGRSNSSIAKPDNSWVKNQVRGPDTAGGSTNEDGLAVGGDRNLPPALAGPVPAVPSDPEQLAQKRRAFVKQYSQSGTSDYAEDSDYSVFDNTTAAAAGKSGTPHGRDNTADMASGQREQDGKVADPEMKGTPKRGRPAEDRGRSSERGRAAVKRRSSPGHKTTKGVHAPAGTLAMMANASESGSPRADLP 2985
            +VAAWCSES GC+VADGSVLVRISANEE GLGYF+EVTDR  SVSGRSS+FELLE     S V V EYQDEAGGTGVGDMSLALLIVAG+CGVAIIAALLA CFIMCRRRSAEK KTADEAHDLELGGVLDRTTP RSND NTSEGRGFSMGNPLKGR+ASRSTD    SYGASPAGTD       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG+VSATS SP AEGAYTP RSGS RTPRRT S+GR DLRGR MYDHSVDEGYDGGR      SPRA+VSRSRS GRSRRPPRGDEFDRGERQLSVTPGRR  SGISPDGR SRSP+VLGMRRSKSEGRADDHSQ SAR+ETVEEDVDASRWEHDGMMPAVGTIERGRRSQRL+MANS RSKSMHDTSKLGRLDSK QYDWE NARSKSATPSRQTYRN   D+ QEFPSDVSWEELRSTHLRNKSK+RVRK SSLPPSYGDAMDGGAG NGSP+DRPPPPSYGPRDAN+FTSQLSIGIPDGPSPSSFQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGLSPGTRA+SARKAARDAQLSA      XXXXXXXXXXXXXXXXXXXXX         +DED+EVVMSPRSTSSAGGEVEGSSVREKIKVFSGRSES GS DK GRGSPALPRGRSPYARGLARGWSQADEEEVKARAE+SSANAKEALALMG SNSS  KPDNSWVKN+VRGPDTAGGSTNE G AVGGDRNL PA+  PVPAVPSD EQLA KRRAFVKQYSQSGTSDYAEDSDYSVFDNT AAAAGKSGT                                                                      L MMANASESGSPRADLP
Sbjct:   46 EVAAWCSESVGCDVADGSVLVRISANEEAGLGYFIEVTDRILSVSGRSSYFELLEPPSNSSSVVVPEYQDEAGGTGVGDMSLALLIVAGICGVAIIAALLAGCFIMCRRRSAEKAKTADEAHDLELGGVLDRTTPGRSNDLNTSEGRGFSMGNPLKGRTASRSTDADKMSYGASPAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVSATSGSPGAEGAYTPVRSGSSRTPRRTMSSGRHDLRGRQMYDHSVDEGYDGGRGRRSFRSPRAYVSRSRSAGRSRRPPRGDEFDRGERQLSVTPGRRRPSGISPDGRRSRSPHVLGMRRSKSEGRADDHSQDSARYETVEEDVDASRWEHDGMMPAVGTIERGRRSQRLAMANSWRSKSMHDTSKLGRLDSKSQYDWEANARSKSATPSRQTYRNEQPDVDQEFPSDVSWEELRSTHLRNKSKVRVRKTSSLPPSYGDAMDGGAGGNGSPDDRPPPPSYGPRDANSFTSQLSIGIPDGPSPSSFQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGLSPGTRAVSARKAARDAQLSAERALAAXXXXXXXXXXXXXXXXXXXXX---------ADEDQEVVMSPRSTSSAGGEVEGSSVREKIKVFSGRSESTGSVDKMGRGSPALPRGRSPYARGLARGWSQADEEEVKARAEQSSANAKEALALMGHSNSSTGKPDNSWVKNEVRGPDTAGGSTNEGGRAVGGDRNLSPAITAPVPAVPSDLEQLAIKRRAFVKQYSQSGTSDYAEDSDYSVFDNTAAAAAGKSGT----------------------------------------------------------------------LVMMANASESGSPRADLP 869

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BLAST of mRNA_Ecto-sp6_S_contig11.1211.1 vs. uniprot
Match: D7FSX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX2_ECTSI)

HSP 1 Score: 643 bits (1658), Expect = 4.540e-219
Identity = 384/411 (93.43%), Postives = 388/411 (94.40%), Query Frame = 1

Query:  373 EEPGLGYFVEVTDRNSSVSGRSSFFELLEALGTPSPVAVREYQDEAGGTGVGDMSLALLIVAGVCGVAIIAALLAVCFIMCRRRSAEKMKTADEAHDLELGGVLDRTTPSRSNDFNTSEGRGFSMGNPLKGRSASRSTDGGITSYGASPAGTDGPSSQTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVSATSRSPAAEGAYTPGRSGSFRTPRRTTSNGRDDLRGRHMYDHSVDEGYDGGRSPRAFVSRSRSVGRSRRPPRGDEFDRGERQLSVTPGRRHSSGISPDGRLSRSPYVLGMRRSKSEGRADDHSQGSARHETVEEDVDASRWEHDGMMPAVGTIERGRRSQRLSMANSRRSKSMHDTSKLGRLDSKGQYDWEDNARSKSATPSRQTYRNGMADIG 1605
            EEPGLGYFVEVTDRNSSVSGRSSFFELLEA  TPS V V EYQDEAGGTGVGDMSLALLIVAGVCGVAIIAALLAVCFIMCRRRSAEKMKTADEAHDLELGGVL RTTP RSNDFNTSEGRGFSMGNPLKGRSASRSTDGGITSYGASPAGTD       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG+VSATSRSPAAEGAYTPGRSGSFRTPR+TTSNGRDDLRGRHMY+HSVDEGYDGGRSPRAFVSRSRSVGRSR PPRGD FDRGERQLSVTPGRR SSGISPDGRLSRSP+VLGMRRSKSEGRADDHSQ SARHETVEEDVDASRWEHDGMMPAVGTIERGRRSQRLSMANSRRSKSMHDTSK GRLDSKGQYD EDNARSKSATPSRQTYRNGM   G
Sbjct:   59 EEPGLGYFVEVTDRNSSVSGRSSFFELLEAQSTPSSVEVPEYQDEAGGTGVGDMSLALLIVAGVCGVAIIAALLAVCFIMCRRRSAEKMKTADEAHDLELGGVLGRTTPGRSNDFNTSEGRGFSMGNPLKGRSASRSTDGGITSYGASPAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVSATSRSPAAEGAYTPGRSGSFRTPRQTTSNGRDDLRGRHMYEHSVDEGYDGGRSPRAFVSRSRSVGRSRGPPRGDGFDRGERQLSVTPGRRRSSGISPDGRLSRSPFVLGMRRSKSEGRADDHSQDSARHETVEEDVDASRWEHDGMMPAVGTIERGRRSQRLSMANSRRSKSMHDTSKSGRLDSKGQYDLEDNARSKSATPSRQTYRNGMVRFG 469

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig11.1211.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig11.1211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5J6K8_9PHAE	0.000e+0	80.51	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FSX2_ECTSI	4.540e-219	93.43	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig11	contig	Ecto-sp6_S_contig11:466610..474977 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	3183
Hectar predicted targeting category	other localisation
Exons	8
Ec32 ortholog description	expressed unknown protein
Ec32 ortholog	Ec-27_006690.1
Cds size	2988

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig11.1211.1	prot_Ecto-sp6_S_contig11.1211.1	Ectocarpus species6 EcLAC_371	polypeptide	Ecto-sp6_S_contig11 466610..474782 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682348776.74806-CDS-Ecto-sp6_S_contig11:466609..466715	1682348776.74806-CDS-Ecto-sp6_S_contig11:466609..466715	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig11 466610..466715 +
1682348776.7561483-CDS-Ecto-sp6_S_contig11:467464..467549	1682348776.7561483-CDS-Ecto-sp6_S_contig11:467464..467549	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig11 467465..467549 +
1682348776.763229-CDS-Ecto-sp6_S_contig11:468179..468285	1682348776.763229-CDS-Ecto-sp6_S_contig11:468179..468285	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig11 468180..468285 +
1682348776.7703195-CDS-Ecto-sp6_S_contig11:469571..469645	1682348776.7703195-CDS-Ecto-sp6_S_contig11:469571..469645	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig11 469572..469645 +
1682348776.7777648-CDS-Ecto-sp6_S_contig11:470142..470339	1682348776.7777648-CDS-Ecto-sp6_S_contig11:470142..470339	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig11 470143..470339 +
1682348776.785089-CDS-Ecto-sp6_S_contig11:471344..472369	1682348776.785089-CDS-Ecto-sp6_S_contig11:471344..472369	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig11 471345..472369 +
1682348776.7926555-CDS-Ecto-sp6_S_contig11:473139..473643	1682348776.7926555-CDS-Ecto-sp6_S_contig11:473139..473643	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig11 473140..473643 +
1682348776.8000128-CDS-Ecto-sp6_S_contig11:473891..474782	1682348776.8000128-CDS-Ecto-sp6_S_contig11:473891..474782	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig11 473892..474782 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682348776.8073714-UTR-Ecto-sp6_S_contig11:474782..474977	1682348776.8073714-UTR-Ecto-sp6_S_contig11:474782..474977	Ectocarpus species6 EcLAC_371	UTR	Ecto-sp6_S_contig11 474783..474977 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp6_S_contig11:466610..474977+
coding sequence from alignment at Ecto-sp6_S_contig11:466610..474977+

protein sequence of mRNA_Ecto-sp6_S_contig11.1211.1

>prot_Ecto-sp6_S_contig11.1211.1 ID=prot_Ecto-sp6_S_contig11.1211.1|Name=mRNA_Ecto-sp6_S_contig11.1211.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=996bp
MTLWGMASEPNVEGSRKTLRTTRKGRNLNWGSILLAAAVGCLVEGAAIVE
AQAEETITVTSPTSDDAIYGGESILVEFTTTGETVVGPYDIDLFKGANQV
AAWCSESAGCNVADGSVLVRISANEEPGLGYFVEVTDRNSSVSGRSSFFE
LLEALGTPSPVAVREYQDEAGGTGVGDMSLALLIVAGVCGVAIIAALLAV
CFIMCRRRSAEKMKTADEAHDLELGGVLDRTTPSRSNDFNTSEGRGFSMG
NPLKGRSASRSTDGGITSYGASPAGTDGPSSQTHPSPGRCIAMGENQRGR
SLSRGRSEGPRMYRSSPGKVSATSRSPAAEGAYTPGRSGSFRTPRRTTSN
GRDDLRGRHMYDHSVDEGYDGGRSPRAFVSRSRSVGRSRRPPRGDEFDRG
ERQLSVTPGRRHSSGISPDGRLSRSPYVLGMRRSKSEGRADDHSQGSARH
ETVEEDVDASRWEHDGMMPAVGTIERGRRSQRLSMANSRRSKSMHDTSKL
GRLDSKGQYDWEDNARSKSATPSRQTYRNGMADIGQEFPSDVSWEELRST
HLRNKSKIRVRKASSLPPSYGDAMDGGAGRNGSPNDRPPPPSYGPRDANN
FTSQLSIGIPDGPSPSSFQSIRSSRSARPGLFGAFGSARRSVTSAGSSGK
SGNFGLSPGTRAISARKAARDAQLSAERALAAAAMASRAADLAAQAALEA
EAEADAEMIANDSDEDREVVMSPRSTSSAGGEVEGSSVREKIKVFSGRSE
SAGSTDKTGRGSPALPRGRSPYARGLARGWSQADEEEVKARAEESSANAK
EALALMGRSNSSIAKPDNSWVKNQVRGPDTAGGSTNEDGLAVGGDRNLPP
ALAGPVPAVPSDPEQLAQKRRAFVKQYSQSGTSDYAEDSDYSVFDNTTAA
AAGKSGTPHGRDNTADMASGQREQDGKVADPEMKGTPKRGRPAEDRGRSS
ERGRAAVKRRSSPGHKTTKGVHAPAGTLAMMANASESGSPRADLP*

mRNA from alignment at Ecto-sp6_S_contig11:466610..474977+

Legend: polypeptideCDSUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp6_S_contig11.1211.1 ID=mRNA_Ecto-sp6_S_contig11.1211.1|Name=mRNA_Ecto-sp6_S_contig11.1211.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8368bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:466610..474977+ (Ectocarpus species6 EcLAC_371)
ATGACCTTGTGGGGAATGGCGTCGGAGCCCAACGTGGAGGGCAGCAGGAA
AACCCTTCGCACAACAAGGAAGGGGCGAAATCTGAATTGGGGGTCAATAT
TGCTAGGTGAGGGTCGTGTCTATTCGCACACGCACACCAAGCATTAGCCG
CTCAATCCTGTATTTCCTCGGTGATTGATTGTTCCCCAAAGGCAACACGC
CCCAGTCCCGTTTGCTGTCGACTGCTGACTGACTGACTGCTGTCGACTGG
ACAAGAGCAATCTAGAAAATTCACTAGAAATTTTCAGGTCCACTGCAGAA
GAACCCCATCAACAATCAAGCAGTTCATGAGAGGGCCGGCGGCAACTCCA
TAAATAGTCCGACAATCTCTGTCCGCGACGCCTTCCTCGAAATCCATGTG
ACGTATCGTGGTCTGCGGCTGACCGTCCGGGAAACGCACCCTGCCCTCTG
CATACCCCTCTGAAGAATGTGCCCCTGCCAAGATGCCAAGAGCTCGTAAA
TTTTTCCTGTTTGTGCAAGGTTTGTATCTAAACAGCCGCGGTTCGCTTCA
AAGAGTCGCTTTTTTGTTTGTCCACTTTAAACTTTTGAAAAAGAATTCAT
CGACGGAAAATCGAGCCTTGTTCAGTTTTTAGCCACAGGTACTCTCGCCG
GACCAGTGGCCAGAGTGACCAAAGCGACACACACCTAGAGGGCGAGAAGC
GGCAATTCACGCCCCTTTGATTGTTTTTCAGGTAAGTGTTATTTAAAGTT
TGAAGTGCGATCGGGTGTGTTGCCGGTGCCTCGTTTGATCTTGCTCGCCT
CCCCGTATCGTCCGTTGGATTGATGCTATGCTCGTGGTGGCGGCGTGGGC
AACAGCAGCAGCGGTAGGGTGCCTGGTGGAAGGAGCTGCCATTGTCGAGG
CCCAAGCCGAAGAGACCATCACCGTCACCTCCCCGACCAGGTTGAGAAGA
CTTACTATACTCCTAGTCTGTTTACTAACAGACTCCTCGTTAAGTCTACT
TTTATAGCCAACTACTGCTGTGGTACAGCAGTATTGTTTTTATCTTTTAA
CCGGTGCAAGGGAGGAGGTCTGTGATTGCCCCTGCGTATGCATACTGCAG
CAGTCTTCTTTTGCGGGGCCACAACGTGCACTTTTTCCCCACTCGCTTGT
TTGTCATGATGCGTACATCATATGCATAGATAGTGTTTTGGGCTGTGTGC
GTATTCTGTCGGGGTGTTTTGGCGGCTTGGGCCACGCTTGTCGTTTTCTC
CAGAAGCTGTCACAACACTTCCCAAAGTTCCGTAAAGTCGAAAACGATTA
CCTTCTGCGCAGAACTCCACAGGAAGAGGCAAGCAATCCCCCGAGTGTTA
TGTAAGGGCTGGAAAGGAAGACACGATGCTTTCACAGATTTTTCCTGTGG
GTGCGTGCCACGGCGTGATTTCTCGTTTCGCAGCAGTATATCTACGATAA
CATCTGGTGTTCTCTTTTCGAGATTTCCCCACTCCCAGAGCCGTGCTGGC
TCGATTCCAACGGCTGTCTCGTGGCTCTTGCTGCCCTCCTCCCACCCCCC
TCTCCTGTGCATGCACCCAGCGATGATGCCATCTACGGCGGAGAATCCAT
TTTGGTTGAGTTCACGACTACGGGAGAGACTGTGGTTGGCCCGTACGACA
TCGACCTCTTCAAAGGAGCCAATCAGGTGGGGGTAATGTAGGAGAGAGGT
GCAGCAGCCGCTTTTCGTGTCTTCATCATGAGGAAAAATCAATACTAACA
CAGCAAGACTACCCCGTTCGAGACATGACCACAGTCGAACGGGATGTGCT
GGAGTCTTTTTGCAGTGTATTGTCAAAGGATGCGTTCCTGTGTACTCTGC
CTGACTTGGTTGATTGTACAGCAGTATCAGCAGCTATGCTACATTTTCTA
CTGGTCGTTCGTTAGACAAGTAAAAATCGAAGCAAACCACTTGTTCCTAC
AGTAGAACCTTTTCTTGTGCATAGGGATATAGGCATGCATACCAAGGGTA
AGGCACTCCGAGGTCCATGGTCTGCCGGAACTTTTTATTATGTATCAAGA
GGATGATTCATGGACTGGCTGTCGTGAACATTGAACGGCAGATCAGCACT
TGTGTTGGGGAACACGACGGTGTCGCTGTCGGCGCAGCTTATGTAACGGC
TGGTAAAGTTATGATTGTCTCCATGACGTGCGTTGTCGAGTGGTAGCCTT
GCCGCATTGTGTGCACACTGCTGTTGTTCCCAGCCCTCTCTGTTTCTGCT
GACAATCATACATGTGCAACACAGCTCTCGCATAGTTTTTGTCTAAGTGT
GTTCTGCTCATGCTGCTGACTGCACACACGAAAACAATATCGAGTGGTCC
ACGTTTTGCGTAGTTTGGGTGCCGCACGCCTTACACACTATAATACTTCA
TGAGGATCACATTCACTGATTCTCATTCTAAGAGAGTTGAATATAGGGGT
ACATAGGTTCATAGACAATCCTGACTTGAGAAAAAAATCGACAGGTATTG
TAGCGTTGATACGAACGACACATCATAACCTACGCATATGCTCCACATCG
ATGCACTTGGATACTGCTGTAGTCATTGGGAACCAGGGTCCCTATCCACT
TGACACATATGTTGTGCGGTGGCGTAAGCATGAACATGGGTTCGGTATGT
GTGGGCCCGCTCCGCATGTTCGAAGCATTTCTTGCTGCAGTTTTGCACGT
TCCACAGCTGTTGGTGTTGCCATTGCTGCAGAAGGCGTGGGTGGGCGCGG
CGACCGGTGTCCTCTGCTTTGAAGTACACTACATAGAGAGCGGGCAAGGT
GTTGCCAACAAATCGCCGAGTCAAACATGTTGCTATCTTCAACATTACCG
GAAGAGCACACTAATGGCAGAATGCATGCCTGTGTCCACACCAGTTCGTT
CTCTTGCTGTGTAATGATTTTACCCCATCTCTGCCGTTCTCTCTCCTCCC
CCCACCCCCTAGGTGGCTGCTTGGTGCAGCGAGTCGGCAGGTTGCAACGT
CGCCGATGGCTCGGTGTTGGTGAGAATATCAGCCAAGTGAGTGCAGAAAA
TGTGTGTGGGTGGTTGTTGCTGTTGTCTGCTACTGTCCAAGGGCTGGGCA
CTAGTCATGTGGTACCGAGTGTGACCCCGGCTCGTGTGCCCGGAAAAAGG
GTAGGGTGTGACGCACACTCCTCTTGCATTCCTCTTCGGGCCTCGAATTT
CTGGGCTCACCAAGTTGTATTCTTAGACCGACAATGTGCTGGTTTTTCTG
CCTGCTGATACTTGTATCGGTCTACGCGGCATGCGTGCCCACTGCTATGG
ATGACGACAACTATTTAGCTTGGTGCTCAGTATCACAACGGCGCGGCAGC
GTTGCCCTTGACGAGCTCCGTTCGCCGACTCCGTGCAGAACCTTTCCGTG
TTTCTTGCCCCCTCCCCACCTTGCCCCCCCTTCCCCTTCTCCTTCCCTCC
CATCCTTACATTTACCTTTGTTTGTTATTCTAACGACCATCTTTTGCTTC
GCGCGGTCTCTGGTGTTTGTCCTCGTCGTGCAGCGAAGAACCTGGACTTG
GCTATTTCGTCGAAGTCACGGACCGAAATTCATCCGTTTCGGGACGGAGC
TCGTTCTTCGAACTCCTAGAGGCACTAGGCACCCCTTCCCCCGTCGCGGT
ACGAGAGTACCAAGATGAGGCCGGAGGAACGGGGGTCGGGGACATGAGCT
TGGCTTTGCTCATCGTGGCCGGAGTCTGCGGTGAGCATTCCAGTCGCGGG
GCCTTGTGGCGTTTTTATGCTCCGTTATGATGCTCGGCGCGGGTAGGAGC
TTGCCCTTAGCGCGAAGTGGTCTCGGGGCTTGTTGATGACGATTCATGTT
TTCTCAAAGCCAAGGGCCGTCACATGGAGTAAGTTGCTCTTCGCAATACC
CTCGATGCTGACGTTGACGTTGATTTAAACCAACCATCTTTGTATCCGCG
TTACTCCTTGCAGACGGCAGACTTCCACTTTTGTACCCGCACGGCTACTA
CTTTCCCCGTGTCCCGAATACCTGTTGTAGCCGGTGTGTGTACAACGCGC
GCGTTGCCCGACCACTGCTGTGGAGCGTCTTCCGCACATCGGATAACAGC
GGGCGTCCTTCGCTGGACGTTTGACAACTTTGTAGATTTGTTTTTGTCTC
CGCAAGCTTCGCGGGGAGGCCCAAAGCCGTGCGTTTTTTTAGGCGCTAAC
CCCTCTCGCCGCCGGGGGGAGACATCGCGGCGAAGGGCCCCGACGGGCGG
GGAATGTAGATCACGGGCCCTAAGCCCGACGCGAGAGCGGGGCGAGAACT
GCTGATGTTTCATTTGTTGTCTCCCGCATCCCTTTTTTTTCGGTCTTGGC
TGCATTAACGAAGAGCCTCGATGGGAGGTCACAACAACGACTCGTTTGCG
TTGCATTGCCTTCGTTTTGGAACCGCGTAAGGCTTGATCCGTTCCTTCCT
CAAGGGTAGTTGCGATCAACCGCATCTGATTACCTCTGTCGCAGTGCTGT
TGCGGGATGCGAAAATAACACGTCGTCGCCGACTTCTGAACCTCGCCGCT
AGGACACTTAGGGCACCAACTTGATAACGCCAGGGCGACCGGCGTTTATC
ACGTGTTGCCTTGGCGACTGCCGTATTTTCCCCTATCCGTACCCGCGCCC
CTCTTTTAAGACACCAGCGCCGTCCCGCTTCCCTTCCCCCTCGGCCTGCG
TGCTGCTATCTTTTTGCTTCCACCCGTTCCGCCAGGTGTCGCCATTATTG
CCGCTCTATTAGCGGTTTGCTTCATCATGTGCCGTCGCCGCAGCGCCGAG
AAAATGAAGACCGCGGATGAAGCCCACGACCTCGAGCTAGGTGGCGTGCT
CGACCGCACGACCCCCAGCAGATCGAACGACTTCAACACTTCAGAGGGAC
GCGGCTTTAGCATGGGCAACCCTCTCAAGGGGCGCTCGGCGTCGCGATCG
ACCGACGGCGGTATAACGTCGTACGGCGCCAGCCCCGCTGGAACGGATGG
GCCGTCGAGTCAAACCCACCCCAGCCCCGGGAGATGCATAGCCATGGGCG
AGAACCAGCGCGGCCGCTCGCTGTCACGGGGCCGCTCCGAGGGGCCCCGC
ATGTACAGGTCTAGCCCAGGCAAGGTCTCCGCCACCTCACGTTCGCCCGC
GGCAGAGGGCGCGTACACCCCAGGAAGGTCTGGCAGTTTCAGGACCCCCC
GCCGGACCACGTCTAACGGTAGAGACGACCTCCGTGGGCGCCACATGTAC
GACCACTCGGTTGATGAGGGCTACGACGGTGGAAGATCCCCCAGAGCTTT
TGTTTCCAGGTCCAGGAGCGTCGGACGCTCGCGAAGACCCCCCAGGGGCG
ACGAGTTTGACCGCGGCGAACGCCAGTTGTCAGTGACGCCAGGCCGCAGG
CATTCCAGCGGCATCAGCCCAGATGGAAGGCTTTCTCGTTCTCCTTACGT
CCTCGGTATGCGCCGCAGCAAGTCCGAGGGCCGCGCGGATGATCATTCGC
AGGGTTCGGCACGCCACGAGACGGTGGAAGAGGATGTCGATGCCTCACGT
TGGGAGCATGACGGCATGATGCCCGCGGTGGGGACGATTGAACGGGGTCG
AAGGAGTCAGCGCCTATCGATGGCCAACTCACGGAGGTCGAAGTCGATGC
ACGACACATCGAAGTTGGGCAGGCTGGACAGCAAGGGTCAGTACGACTGG
GAAGACAACGCGAGGAGCAAATCTGCTACACCTTCCCGTCAGACCTACAG
GAATGGAATGGTGCGTTTCGGATTTCGAATTGTTGAAGTAGGCGCAAATT
TTGGCAGGTTGGCTCAGTGCAATATCTTGGTTGAGGTACCTTCAGCGTTT
CCCACAGCCAAAGCCCGTTTTGTTTCTGGGCTCTATGAACGTCCCTACGT
TGGATTTACGGACGCTATCGGGCAGGAATCAGCATAGAACCGAAAACCAA
CTTGCCGCGGCAGCGATAACCAAGTGTAGGTAAGGACGCGAAAATGCGGT
CTGTCTTCGTGGAGATGCCTCATCTTGTTTTTTTTTTTGCATATTCTTTC
GTGTTGGCTCACGGCGCTCATCCTCGACTAGAGCGAGTGTTGGTCGAACA
ATTAGAGCCAGTGTACAATGTGGAAGTTCTGGGGGTGTCGGTTGGCCTCT
CGTTGAAACCTGGTAGCCGGCCCTGTGATGCAACCTGTCCGCAGCGCCCC
TTGTAGTCCTTTGCAACATTGGAAAAGGACTTTCCATGTTTAGTTGGTTA
ATGGGAACTTTACGTCAGCGCGAAATAGTCTCGAGGCTTGTTTTATACGG
TTCATTTTTTCTCAAAACCAAACCAAGGACCGTCACACCCAGTACGCTGT
TCTTCGCAATATTAACACTGGGTTATGATGTTGATTTCAACCACATATGC
TCTCGCGCTACTCCTGACAGCACCTTCCTTTTGCACTCCCGTTGCAACTC
ACTTGGTTACACTACCTCACCCCCACCCTCGGCTTCTTGCCTGCGATCCT
CCTTCCCTCCGCCCTCCGGCCATTTCAAAGGCTGATATCGGCCAAGAATT
TCCGTCAGACGTGAGCTGGGAAGAACTACGGTCCACTCACCTCAGGAACA
AGAGCAAGATCCGCGTCCGCAAGGCGTCCTCCCTGCCGCCGTCCTACGGC
GACGCTATGGACGGCGGCGCAGGCCGCAATGGCTCCCCTAATGACCGCCC
CCCTCCCCCTTCTTACGGCCCCCGCGACGCTAATAACTTCACCTCGCAGC
TGTCGATCGGCATCCCCGACGGCCCCTCCCCTAGCTCTTTCCAAAGCATC
AGGAGCTCCAGGTCCGCCCGCCCCGGTCTGTTCGGCGCTTTCGGAAGCGC
TAGGCGGTCTGTTACTTCCGCCGGATCGTCCGGCAAGTCCGGGAACTTCG
GGCTTTCGCCTGGCACTCGTGCGATTAGCGCCAGAAAGGCGGCGAGGGAT
GCACAGCTCTCGGCCGAGAGGGCGCTGGCCGCCGCCGCGATGGCGTCGCG
AGCGGCGGATCTCGCAGCACAGGCGGCGTTGGAGGTGGGTGTTATTTACC
TCTGTTTTCATCAATGCCTCTCTGGCGGCGTGTTAGTTTGTTGGGCGAAA
CGTGGGTTGGACCGATACAACAAGACAGGCCATACTTATTTTTTTGCCAA
TTTATGTCACAGGTGCCTCCTGGTATTTGCAATATTTCTTTGCGGAACTT
GGAACTCATGTGTTTCTTTTTTTGACGCGCCGAACGGTACCTGTGGTCGA
TTATTTTCTCTCAAAAAACCACTTGGAGTCAGGCGGAAGCTGAGGCCGAC
GCGGAGATGATCGCCAATGACTCCGATGAGGATCGGGAGGTGGTGATGTC
CCCGCGATCAACGTCTTCGGCGGGCGGCGAGGTCGAGGGCTCGTCTGTTC
GCGAAAAGATCAAGGTCTTCAGCGGTAGGAGCGAGAGCGCCGGTAGCACC
GATAAGACGGGCCGGGGCAGCCCTGCCCTTCCTCGGGGAAGGTCGCCGTA
TGCACGAGGCCTTGCTCGGGGCTGGTCCCAGGCCGATGAGGAAGAGGTCA
AGGCTAGGGCGGAGGAGTCCTCGGCCAATGCCAAAGAGGCTCTGGCCTTG
ATGGGTCGTTCGAACAGCAGCATTGCCAAACCCGACAACAGTTGGGTCAA
GAATCAGGTCAGGGGGCCGGACACCGCTGGCGGGAGTACCAACGAGGACG
GTCTCGCCGTTGGTGGCGACCGAAACCTTCCCCCTGCCCTCGCGGGGCCC
GTGCCCGCGGTACCCAGCGACCCGGAGCAGCTCGCCCAAAAGCGGAGGGC
GTTCGTAAAGCAGTACAGCCAGAGCGGCACAAGCGATTATGCGGAGGATT
CGGATTACTCTGTCTTTGACAATACTACGGCTGCTGCGGCCGGGAAGTCA
GGTACCCCGCACGGACGCGATAACACTGCGGACATGGCTTCAGGGCAACG
GGAGCAGGATGGCAAAGTCGCCGATCCCGAAATGAAAGGAACCCCCAAGC
GGGGACGCCCAGCCGAAGATCGCGGAAGGAGCTCTGAACGCGGAAGGGCC
GCGGTCAAAAGGCGATCTTCCCCTGGCCACAAAACCACAAAGGGAGTCCA
CGCGCCCGCAGGGACATTGGCGATGATGGCAAATGCGTCCGAGTCGGGCA
GCCCAAGGGCAGATCTCCCGTAGTCAGACAAGGCACAACAGGACGATTGA
TTCGGGGTTTGGGAAATGGCTTCGGGGCTTGAACACACTCAATCCCAAGA
AAGCCGGTGCGTTCTGGCGAGCCGTCAAACTACTCAAGAAATGTGGTGCT
TGTTTTTTTTTTGCCGTTTAGAACGTCAAGTTTGTCGATTTGATGGCTGT
GCTGCCGCCGTGAGCGTG

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig11:466610..474977+

>mRNA_Ecto-sp6_S_contig11.1211.1 ID=mRNA_Ecto-sp6_S_contig11.1211.1|Name=mRNA_Ecto-sp6_S_contig11.1211.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2988bp|location=Sequence derived from alignment at Ecto-sp6_S_contig11:466610..474977+ (Ectocarpus species6 EcLAC_371)
ATGACCTTGTGGGGAATGGCGTCGGAGCCCAACGTGGAGGGCAGCAGGAA
AACCCTTCGCACAACAAGGAAGGGGCGAAATCTGAATTGGGGGTCAATAT
TGCTAGCAGCAGCGGTAGGGTGCCTGGTGGAAGGAGCTGCCATTGTCGAG
GCCCAAGCCGAAGAGACCATCACCGTCACCTCCCCGACCAGCGATGATGC
CATCTACGGCGGAGAATCCATTTTGGTTGAGTTCACGACTACGGGAGAGA
CTGTGGTTGGCCCGTACGACATCGACCTCTTCAAAGGAGCCAATCAGGTG
GCTGCTTGGTGCAGCGAGTCGGCAGGTTGCAACGTCGCCGATGGCTCGGT
GTTGGTGAGAATATCAGCCAACGAAGAACCTGGACTTGGCTATTTCGTCG
AAGTCACGGACCGAAATTCATCCGTTTCGGGACGGAGCTCGTTCTTCGAA
CTCCTAGAGGCACTAGGCACCCCTTCCCCCGTCGCGGTACGAGAGTACCA
AGATGAGGCCGGAGGAACGGGGGTCGGGGACATGAGCTTGGCTTTGCTCA
TCGTGGCCGGAGTCTGCGGTGTCGCCATTATTGCCGCTCTATTAGCGGTT
TGCTTCATCATGTGCCGTCGCCGCAGCGCCGAGAAAATGAAGACCGCGGA
TGAAGCCCACGACCTCGAGCTAGGTGGCGTGCTCGACCGCACGACCCCCA
GCAGATCGAACGACTTCAACACTTCAGAGGGACGCGGCTTTAGCATGGGC
AACCCTCTCAAGGGGCGCTCGGCGTCGCGATCGACCGACGGCGGTATAAC
GTCGTACGGCGCCAGCCCCGCTGGAACGGATGGGCCGTCGAGTCAAACCC
ACCCCAGCCCCGGGAGATGCATAGCCATGGGCGAGAACCAGCGCGGCCGC
TCGCTGTCACGGGGCCGCTCCGAGGGGCCCCGCATGTACAGGTCTAGCCC
AGGCAAGGTCTCCGCCACCTCACGTTCGCCCGCGGCAGAGGGCGCGTACA
CCCCAGGAAGGTCTGGCAGTTTCAGGACCCCCCGCCGGACCACGTCTAAC
GGTAGAGACGACCTCCGTGGGCGCCACATGTACGACCACTCGGTTGATGA
GGGCTACGACGGTGGAAGATCCCCCAGAGCTTTTGTTTCCAGGTCCAGGA
GCGTCGGACGCTCGCGAAGACCCCCCAGGGGCGACGAGTTTGACCGCGGC
GAACGCCAGTTGTCAGTGACGCCAGGCCGCAGGCATTCCAGCGGCATCAG
CCCAGATGGAAGGCTTTCTCGTTCTCCTTACGTCCTCGGTATGCGCCGCA
GCAAGTCCGAGGGCCGCGCGGATGATCATTCGCAGGGTTCGGCACGCCAC
GAGACGGTGGAAGAGGATGTCGATGCCTCACGTTGGGAGCATGACGGCAT
GATGCCCGCGGTGGGGACGATTGAACGGGGTCGAAGGAGTCAGCGCCTAT
CGATGGCCAACTCACGGAGGTCGAAGTCGATGCACGACACATCGAAGTTG
GGCAGGCTGGACAGCAAGGGTCAGTACGACTGGGAAGACAACGCGAGGAG
CAAATCTGCTACACCTTCCCGTCAGACCTACAGGAATGGAATGGCTGATA
TCGGCCAAGAATTTCCGTCAGACGTGAGCTGGGAAGAACTACGGTCCACT
CACCTCAGGAACAAGAGCAAGATCCGCGTCCGCAAGGCGTCCTCCCTGCC
GCCGTCCTACGGCGACGCTATGGACGGCGGCGCAGGCCGCAATGGCTCCC
CTAATGACCGCCCCCCTCCCCCTTCTTACGGCCCCCGCGACGCTAATAAC
TTCACCTCGCAGCTGTCGATCGGCATCCCCGACGGCCCCTCCCCTAGCTC
TTTCCAAAGCATCAGGAGCTCCAGGTCCGCCCGCCCCGGTCTGTTCGGCG
CTTTCGGAAGCGCTAGGCGGTCTGTTACTTCCGCCGGATCGTCCGGCAAG
TCCGGGAACTTCGGGCTTTCGCCTGGCACTCGTGCGATTAGCGCCAGAAA
GGCGGCGAGGGATGCACAGCTCTCGGCCGAGAGGGCGCTGGCCGCCGCCG
CGATGGCGTCGCGAGCGGCGGATCTCGCAGCACAGGCGGCGTTGGAGGCG
GAAGCTGAGGCCGACGCGGAGATGATCGCCAATGACTCCGATGAGGATCG
GGAGGTGGTGATGTCCCCGCGATCAACGTCTTCGGCGGGCGGCGAGGTCG
AGGGCTCGTCTGTTCGCGAAAAGATCAAGGTCTTCAGCGGTAGGAGCGAG
AGCGCCGGTAGCACCGATAAGACGGGCCGGGGCAGCCCTGCCCTTCCTCG
GGGAAGGTCGCCGTATGCACGAGGCCTTGCTCGGGGCTGGTCCCAGGCCG
ATGAGGAAGAGGTCAAGGCTAGGGCGGAGGAGTCCTCGGCCAATGCCAAA
GAGGCTCTGGCCTTGATGGGTCGTTCGAACAGCAGCATTGCCAAACCCGA
CAACAGTTGGGTCAAGAATCAGGTCAGGGGGCCGGACACCGCTGGCGGGA
GTACCAACGAGGACGGTCTCGCCGTTGGTGGCGACCGAAACCTTCCCCCT
GCCCTCGCGGGGCCCGTGCCCGCGGTACCCAGCGACCCGGAGCAGCTCGC
CCAAAAGCGGAGGGCGTTCGTAAAGCAGTACAGCCAGAGCGGCACAAGCG
ATTATGCGGAGGATTCGGATTACTCTGTCTTTGACAATACTACGGCTGCT
GCGGCCGGGAAGTCAGGTACCCCGCACGGACGCGATAACACTGCGGACAT
GGCTTCAGGGCAACGGGAGCAGGATGGCAAAGTCGCCGATCCCGAAATGA
AAGGAACCCCCAAGCGGGGACGCCCAGCCGAAGATCGCGGAAGGAGCTCT
GAACGCGGAAGGGCCGCGGTCAAAAGGCGATCTTCCCCTGGCCACAAAAC
CACAAAGGGAGTCCACGCGCCCGCAGGGACATTGGCGATGATGGCAAATG
CGTCCGAGTCGGGCAGCCCAAGGGCAGATCTCCCGTAG