prot_Ecto-sp6_S_contig11.1211.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig11.1211.1
Unique Name	prot_Ecto-sp6_S_contig11.1211.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	996

Homology

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BLAST of mRNA_Ecto-sp6_S_contig11.1211.1 vs. uniprot
Match: A0A6H5J6K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K8_9PHAE)

HSP 1 Score: 1112 bits (2875), Expect = 0.000e+0
Identity = 727/903 (80.51%), Postives = 749/903 (82.95%), Query Frame = 0

Query:   99 QVAAWCSESAGCNVADGSVLVRISANEEPGLGYFVEVTDRNSSVSGRSSFFELLEALGTPSPVAVREYQDEAGGTGVGDMSLALLIVAGVCGVAIIAALLAVCFIMCRRRSAEKMKTADEAHDLELGGVLDRTTPSRSNDFNTSEGRGFSMGNPLKGRSASRSTDGGITSYGASPAGTDGPSSQTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVSATSRSPAAEGAYTPGRSGSFRTPRRTTSNGRDDLRGRHMYDHSVDEGYDGGR------SPRAFVSRSRSVGRSRRPPRGDEFDRGERQLSVTPGRRHSSGISPDGRLSRSPYVLGMRRSKSEGRADDHSQGSARHETVEEDVDASRWEHDGMMPAVGTIERGRRSQRLSMANSRRSKSMHDTSKLGRLDSKGQYDWEDNARSKSATPSRQTYRNGMADIGQEFPSDVSWEELRSTHLRNKSKIRVRKASSLPPSYGDAMDGGAGRNGSPNDRPPPPSYGPRDANNFTSQLSIGIPDGPSPSSFQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGLSPGTRAISARKAARDAQLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMIANDSDEDREVVMSPRSTSSAGGEVEGSSVREKIKVFSGRSESAGSTDKTGRGSPALPRGRSPYARGLARGWSQADEEEVKARAEESSANAKEALALMGRSNSSIAKPDNSWVKNQVRGPDTAGGSTNEDGLAVGGDRNLPPALAGPVPAVPSDPEQLAQKRRAFVKQYSQSGTSDYAEDSDYSVFDNTTAAAAGKSGTPHGRDNTADMASGQREQDGKVADPEMKGTPKRGRPAEDRGRSSERGRAAVKRRSSPGHKTTKGVHAPAGTLAMMANASESGSPRADLP 995
            +VAAWCSES GC+VADGSVLVRISANEE GLGYF+EVTDR  SVSGRSS+FELLE     S V V EYQDEAGGTGVGDMSLALLIVAG+CGVAIIAALLA CFIMCRRRSAEK KTADEAHDLELGGVLDRTTP RSND NTSEGRGFSMGNPLKGR+ASRSTD    SYGASPAGTD       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG+VSATS SP AEGAYTP RSGS RTPRRT S+GR DLRGR MYDHSVDEGYDGGR      SPRA+VSRSRS GRSRRPPRGDEFDRGERQLSVTPGRR  SGISPDGR SRSP+VLGMRRSKSEGRADDHSQ SAR+ETVEEDVDASRWEHDGMMPAVGTIERGRRSQRL+MANS RSKSMHDTSKLGRLDSK QYDWE NARSKSATPSRQTYRN   D+ QEFPSDVSWEELRSTHLRNKSK+RVRK SSLPPSYGDAMDGGAG NGSP+DRPPPPSYGPRDAN+FTSQLSIGIPDGPSPSSFQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGLSPGTRA+SARKAARDAQLSA      XXXXXXXXXXXXXXXXXXXXX         +DED+EVVMSPRSTSSAGGEVEGSSVREKIKVFSGRSES GS DK GRGSPALPRGRSPYARGLARGWSQADEEEVKARAE+SSANAKEALALMG SNSS  KPDNSWVKN+VRGPDTAGGSTNE G AVGGDRNL PA+  PVPAVPSD EQLA KRRAFVKQYSQSGTSDYAEDSDYSVFDNT AAAAGKSGT                                                                      L MMANASESGSPRADLP
Sbjct:   46 EVAAWCSESVGCDVADGSVLVRISANEEAGLGYFIEVTDRILSVSGRSSYFELLEPPSNSSSVVVPEYQDEAGGTGVGDMSLALLIVAGICGVAIIAALLAGCFIMCRRRSAEKAKTADEAHDLELGGVLDRTTPGRSNDLNTSEGRGFSMGNPLKGRTASRSTDADKMSYGASPAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVSATSGSPGAEGAYTPVRSGSSRTPRRTMSSGRHDLRGRQMYDHSVDEGYDGGRGRRSFRSPRAYVSRSRSAGRSRRPPRGDEFDRGERQLSVTPGRRRPSGISPDGRRSRSPHVLGMRRSKSEGRADDHSQDSARYETVEEDVDASRWEHDGMMPAVGTIERGRRSQRLAMANSWRSKSMHDTSKLGRLDSKSQYDWEANARSKSATPSRQTYRNEQPDVDQEFPSDVSWEELRSTHLRNKSKVRVRKTSSLPPSYGDAMDGGAGGNGSPDDRPPPPSYGPRDANSFTSQLSIGIPDGPSPSSFQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGLSPGTRAVSARKAARDAQLSAERALAAXXXXXXXXXXXXXXXXXXXXX---------ADEDQEVVMSPRSTSSAGGEVEGSSVREKIKVFSGRSESTGSVDKMGRGSPALPRGRSPYARGLARGWSQADEEEVKARAEQSSANAKEALALMGHSNSSTGKPDNSWVKNEVRGPDTAGGSTNEGGRAVGGDRNLSPAITAPVPAVPSDLEQLAIKRRAFVKQYSQSGTSDYAEDSDYSVFDNTAAAAAGKSGT----------------------------------------------------------------------LVMMANASESGSPRADLP 869

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BLAST of mRNA_Ecto-sp6_S_contig11.1211.1 vs. uniprot
Match: D7FSX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX2_ECTSI)

HSP 1 Score: 643 bits (1658), Expect = 6.250e-220
Identity = 384/411 (93.43%), Postives = 388/411 (94.40%), Query Frame = 0

Query:  125 EEPGLGYFVEVTDRNSSVSGRSSFFELLEALGTPSPVAVREYQDEAGGTGVGDMSLALLIVAGVCGVAIIAALLAVCFIMCRRRSAEKMKTADEAHDLELGGVLDRTTPSRSNDFNTSEGRGFSMGNPLKGRSASRSTDGGITSYGASPAGTDGPSSQTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKVSATSRSPAAEGAYTPGRSGSFRTPRRTTSNGRDDLRGRHMYDHSVDEGYDGGRSPRAFVSRSRSVGRSRRPPRGDEFDRGERQLSVTPGRRHSSGISPDGRLSRSPYVLGMRRSKSEGRADDHSQGSARHETVEEDVDASRWEHDGMMPAVGTIERGRRSQRLSMANSRRSKSMHDTSKLGRLDSKGQYDWEDNARSKSATPSRQTYRNGMADIG 535
            EEPGLGYFVEVTDRNSSVSGRSSFFELLEA  TPS V V EYQDEAGGTGVGDMSLALLIVAGVCGVAIIAALLAVCFIMCRRRSAEKMKTADEAHDLELGGVL RTTP RSNDFNTSEGRGFSMGNPLKGRSASRSTDGGITSYGASPAGTD       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG+VSATSRSPAAEGAYTPGRSGSFRTPR+TTSNGRDDLRGRHMY+HSVDEGYDGGRSPRAFVSRSRSVGRSR PPRGD FDRGERQLSVTPGRR SSGISPDGRLSRSP+VLGMRRSKSEGRADDHSQ SARHETVEEDVDASRWEHDGMMPAVGTIERGRRSQRLSMANSRRSKSMHDTSK GRLDSKGQYD EDNARSKSATPSRQTYRNGM   G
Sbjct:   59 EEPGLGYFVEVTDRNSSVSGRSSFFELLEAQSTPSSVEVPEYQDEAGGTGVGDMSLALLIVAGVCGVAIIAALLAVCFIMCRRRSAEKMKTADEAHDLELGGVLGRTTPGRSNDFNTSEGRGFSMGNPLKGRSASRSTDGGITSYGASPAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVSATSRSPAAEGAYTPGRSGSFRTPRQTTSNGRDDLRGRHMYEHSVDEGYDGGRSPRAFVSRSRSVGRSRGPPRGDGFDRGERQLSVTPGRRRSSGISPDGRLSRSPFVLGMRRSKSEGRADDHSQDSARHETVEEDVDASRWEHDGMMPAVGTIERGRRSQRLSMANSRRSKSMHDTSKSGRLDSKGQYDLEDNARSKSATPSRQTYRNGMVRFG 469

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig11.1211.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig11.1211.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5J6K8_9PHAE	0.000e+0	80.51	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FSX2_ECTSI	6.250e-220	93.43	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..31
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..51
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 180..205
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 52..179
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 32..43
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 44..51
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 206..995
None	No IPR available	TMHMM	TMhelix		coord: 182..204

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig11	contig	Ecto-sp6_S_contig11:466610..474782 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig11.1211.1	mRNA_Ecto-sp6_S_contig11.1211.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig11 466610..474977 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig11.1211.1 ID=prot_Ecto-sp6_S_contig11.1211.1|Name=mRNA_Ecto-sp6_S_contig11.1211.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=996bp
MTLWGMASEPNVEGSRKTLRTTRKGRNLNWGSILLAAAVGCLVEGAAIVE
AQAEETITVTSPTSDDAIYGGESILVEFTTTGETVVGPYDIDLFKGANQV
AAWCSESAGCNVADGSVLVRISANEEPGLGYFVEVTDRNSSVSGRSSFFE
LLEALGTPSPVAVREYQDEAGGTGVGDMSLALLIVAGVCGVAIIAALLAV
CFIMCRRRSAEKMKTADEAHDLELGGVLDRTTPSRSNDFNTSEGRGFSMG
NPLKGRSASRSTDGGITSYGASPAGTDGPSSQTHPSPGRCIAMGENQRGR
SLSRGRSEGPRMYRSSPGKVSATSRSPAAEGAYTPGRSGSFRTPRRTTSN
GRDDLRGRHMYDHSVDEGYDGGRSPRAFVSRSRSVGRSRRPPRGDEFDRG
ERQLSVTPGRRHSSGISPDGRLSRSPYVLGMRRSKSEGRADDHSQGSARH
ETVEEDVDASRWEHDGMMPAVGTIERGRRSQRLSMANSRRSKSMHDTSKL
GRLDSKGQYDWEDNARSKSATPSRQTYRNGMADIGQEFPSDVSWEELRST
HLRNKSKIRVRKASSLPPSYGDAMDGGAGRNGSPNDRPPPPSYGPRDANN
FTSQLSIGIPDGPSPSSFQSIRSSRSARPGLFGAFGSARRSVTSAGSSGK
SGNFGLSPGTRAISARKAARDAQLSAERALAAAAMASRAADLAAQAALEA
EAEADAEMIANDSDEDREVVMSPRSTSSAGGEVEGSSVREKIKVFSGRSE
SAGSTDKTGRGSPALPRGRSPYARGLARGWSQADEEEVKARAEESSANAK
EALALMGRSNSSIAKPDNSWVKNQVRGPDTAGGSTNEDGLAVGGDRNLPP
ALAGPVPAVPSDPEQLAQKRRAFVKQYSQSGTSDYAEDSDYSVFDNTTAA
AAGKSGTPHGRDNTADMASGQREQDGKVADPEMKGTPKRGRPAEDRGRSS
ERGRAAVKRRSSPGHKTTKGVHAPAGTLAMMANASESGSPRADLP*