prot_Ecto-sp6_S_contig106.1047.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig106.1047.1
Unique Nameprot_Ecto-sp6_S_contig106.1047.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length210
Homology
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BLAST of mRNA_Ecto-sp6_S_contig106.1047.1 vs. uniprot
Match: D7G453_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G453_ECTSI)

HSP 1 Score: 384 bits (986), Expect = 2.240e-134
Identity = 199/209 (95.22%), Postives = 204/209 (97.61%), Query Frame = 0 
Query:    1 MRIAVAALGLGLASIIPGSVDGFVVPAGRVVDLVPSSRSDSLHRAGVVGDRSRLGLSSSSGRNPISTLSRDGGARQISTAGVKATALSARAGRGAEEGGQEDGPSSAAAMSGVGSVGSNVLLLVASVMVVKGLLLPENVRHLGFCPTEDPIRGRDTLPWRMMIESGRECGTIPEVMTKYVTAPLAFPGTPEWGMMLNTKEDLAKDAWLQ 209
            MRIAVAALGLGLAS+IPG+VDGFVVPAGRVVD+VPSSRSDSLHRAGV+GDRSRLGLS  S RNP+STLSRDGGARQ STAGV ATALSARAGRGAEEGGQEDGPSSAAAMSGVGSVGSNVLLLVASVMVVKGLLLPENVRHLGFCPTEDPIRGRDTLPWRMMIESGRECGTIPEVMTKYVTAPLAFPGTPEWGMMLNTKEDLAKDAWLQ
Sbjct:    1 MRIAVAALGLGLASVIPGTVDGFVVPAGRVVDVVPSSRSDSLHRAGVMGDRSRLGLSGLSERNPVSTLSRDGGARQTSTAGVTATALSARAGRGAEEGGQEDGPSSAAAMSGVGSVGSNVLLLVASVMVVKGLLLPENVRHLGFCPTEDPIRGRDTLPWRMMIESGRECGTIPEVMTKYVTAPLAFPGTPEWGMMLNTKEDLAKDAWLQ 209
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig106.1047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G453_ECTSI2.240e-13495.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..209
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.647

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig106contigEcto-sp6_S_contig106:231688..235756 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig106.1047.1mRNA_Ecto-sp6_S_contig106.1047.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig106 231180..235756 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig106.1047.1 ID=prot_Ecto-sp6_S_contig106.1047.1|Name=mRNA_Ecto-sp6_S_contig106.1047.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=210bp
MRIAVAALGLGLASIIPGSVDGFVVPAGRVVDLVPSSRSDSLHRAGVVGD
RSRLGLSSSSGRNPISTLSRDGGARQISTAGVKATALSARAGRGAEEGGQ
EDGPSSAAAMSGVGSVGSNVLLLVASVMVVKGLLLPENVRHLGFCPTEDP
IRGRDTLPWRMMIESGRECGTIPEVMTKYVTAPLAFPGTPEWGMMLNTKE
DLAKDAWLQ*
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