prot_Ecto-sp6_S_contig106.1028.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig106.1028.1
Unique Nameprot_Ecto-sp6_S_contig106.1028.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length139
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig106.1028.1 vs. uniprot
Match: D7G4A6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4A6_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 8.870e-86
Identity = 134/138 (97.10%), Postives = 136/138 (98.55%), Query Frame = 0 
Query:    1 MSGSLGQHTGVIVAVVCGLVAVAGTTAVARKWKSGGTKRRMLGNIASGREFLDTLSAEVADLEATIALAAEASDLDTARKEHERKSREHDEHVTQVLTHLDKCTGGDEIGVARKKQIHRAEVLGLRISKILPGGPVDG 138
            MSGSLGQ+TGVI AVVCGLVAVAGTTAVARKWKSGGTKRRMLGNIASGREFLD LSAEVADLEATIALAAEASDLDTARKE+ERKSREHDEHVTQVLTHLDKCTGGDEIGVARKKQIHRAEVLGLRISKILPGGPVDG
Sbjct:    1 MSGSLGQYTGVIAAVVCGLVAVAGTTAVARKWKSGGTKRRMLGNIASGREFLDALSAEVADLEATIALAAEASDLDTARKENERKSREHDEHVTQVLTHLDKCTGGDEIGVARKKQIHRAEVLGLRISKILPGGPVDG 138
[Close]
BLAST of mRNA_Ecto-sp6_S_contig106.1028.1 vs. uniprot
Match: A0A6H5JHT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT5_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 2.160e-77
Identity = 125/138 (90.58%), Postives = 128/138 (92.75%), Query Frame = 0 
Query:    1 MSGSLGQHTGVIVAVVCGLVAVAGTTAVARKWKSGGTKRRMLGNIASGREFLDTLSAEVADLEATIALAAEASDLDTARKEHERKSREHDEHVTQVLTHLDKCTGGDEIGVARKKQIHRAEVLGLRISKILPGGPVDG 138
            MSGSLGQHTGVI AVV  LVAVA TTAVARKWKSGG+KRRMLGNIASGREF+DTLSAEVADLEATIALAAEASDLDTAR+EHERKSREHDE VTQVLTHLDKCTGG EI VARKKQIHRAE LGLRIS ILPGG VDG
Sbjct:    1 MSGSLGQHTGVIAAVVFALVAVAATTAVARKWKSGGSKRRMLGNIASGREFIDTLSAEVADLEATIALAAEASDLDTARQEHERKSREHDESVTQVLTHLDKCTGGGEISVARKKQIHRAEALGLRISNILPGGHVDG 138
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig106.1028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4A6_ECTSI8.870e-8697.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHT5_9PHAE2.160e-7790.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 52..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..138
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig106contigEcto-sp6_S_contig106:66549..68398 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig106.1028.1mRNA_Ecto-sp6_S_contig106.1028.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig106 66549..68855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig106.1028.1 ID=prot_Ecto-sp6_S_contig106.1028.1|Name=mRNA_Ecto-sp6_S_contig106.1028.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=139bp
MSGSLGQHTGVIVAVVCGLVAVAGTTAVARKWKSGGTKRRMLGNIASGRE
FLDTLSAEVADLEATIALAAEASDLDTARKEHERKSREHDEHVTQVLTHL
DKCTGGDEIGVARKKQIHRAEVLGLRISKILPGGPVDG*
back to top