prot_Ecto-sp6_S_contig103.910.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig103.910.1
Unique Name	prot_Ecto-sp6_S_contig103.910.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	287

Homology

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BLAST of mRNA_Ecto-sp6_S_contig103.910.1 vs. uniprot
Match: D7G0T4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0T4_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 1.570e-109
Identity = 260/286 (90.91%), Postives = 261/286 (91.26%), Query Frame = 0

Query:    1 MKTVAFACAVAACAGGADAFVGSMRPASSSMRRAGPSSSVRMATDVTVPDLLKQTEKLKLLSTAXXXXXXXXXXXXXLTLKDVEKLLPLVDENDLIGLAKGVGPDLLKVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALVTVLPDDSVSSIAIETFVAFPLLFVLPAVCGVAGFALTSLKNGSLVDLITSTASPKPAAASPVXXXXXXXXMKASKPXXXXXXXKSSGGRPAAGARSAKAXXXXXXXXXAAPKKAAPKXXXXXPKPAGNIANLPKAL 286
            MKTVAFACAVAACAGGADAFVGSMRPASSSMRRAGPSSSVRMA DVTVPDLLKQTEKLKLL   XXXXXXXXXXXXX TLKDVEKLLPLVDENDLIGLAKGVGPDLLKVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALVTVLPDDSVSSIAIETFVAFPLLFVLPAVCGVAGFALTSLKNGSLVD ITSTASPKPAAASPV   X    +KASKP       KSSGGRPA GARS   XXXXXXXXXAAPKKAAPKXXXXX KPAGNIANLPKAL
Sbjct:    1 MKTVAFACAVAACAGGADAFVGSMRPASSSMRRAGPSSSVRMAADVTVPDLLKQTEKLKLLXXXXXXXXXXXXXXXXXTLKDVEKLLPLVDENDLIGLAKGVGPDLLKVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALVTVLPDDSVSSIAIETFVAFPLLFVLPAVCGVAGFALTSLKNGSLVDFITSTASPKPAAASPVASSXAPVAVKASKPSAPAAAPKSSGGRPAVGARSXXXXXXXXXXXXAAPKKAAPKXXXXXXKPAGNIANLPKAL 286

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BLAST of mRNA_Ecto-sp6_S_contig103.910.1 vs. uniprot
Match: A0A835Z532_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z532_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.550e-19
Identity = 99/197 (50.25%), Postives = 126/197 (63.96%), Query Frame = 0

Query:    1 MKTVAFACAVAACAGGADAFV--GSMRPASSSMRRAGPSSSVRMATDVTVPDLLKQTEKLKLLSTAXXXXXXXXXXXXXLTLKDVEKLLPLVDENDLIGLAKGVGPDLLKVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALVTVLPDDSVSSIAIETFVAFPLLFVLPAVCGVAGFALTSLKNGSLV 195
            +K +A A A+AACA  ADAF   GS+RPA   + R G + +V   +   V +LL +TE+LKLLSTA XXXXXXXXXXXXLTL+D+E  LP +D+ D I L K + PDLL +AP     XXXXXXXXXXXXXXXXX            G A +  +PDDS+ +IA++ F+A PLL + P    V    LT   +G+LV
Sbjct:    2 VKAIAAAAAIAACATSADAFAVPGSVRPA---VARRGMTMAVSKGS---VQELLIKTEELKLLSTASXXXXXXXXXXXXLTLRDLEAALPFLDDIDAIALGKELSPDLLAIAPKALEAXXXXXXXXXXXXXXXXXALLTGAALSVVAGLAAIAAIPDDSIGAIALQAFLAVPLLVLAPGAAVVGAGVLTKANDGTLV 192

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BLAST of mRNA_Ecto-sp6_S_contig103.910.1 vs. uniprot
Match: A0A0G4F6S3_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F6S3_VITBC)

HSP 1 Score: 57.4 bits (137), Expect = 2.910e-6
Identity = 69/180 (38.33%), Postives = 93/180 (51.67%), Query Frame = 0

Query:   19 AFVGSMRPASSSMRR--AGPSSSVRMATDV---TVPDLLKQTEKLKLLSTAXXXXXXXXXXXXXLTLKDVEKLLPLVDENDLIGLAKGVGPDLLKVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALVTVLPDDSVSSIAIETFVAFPLLFVLPAVCGVAGFALTSLKNGS 193
            AF  S  PA    RR  A P++  ++A D     VP +LK+TE+L+LLS     XXXXXXXXXXLTL  +E LL +VDE   +   + V P ++   P    XXXXXXX                       G   +  LPDDSV+S+A++TF+  PL  +LP V  V  F    +++ S
Sbjct:   21 AFTASPVPALLHSRRSVASPATRRQVAADEYEDVVPRVLKRTEELQLLSKLAEAXXXXXXXXXXLTLSQIEPLLKVVDEQYALYGLEEVAPKIVPALPALLEXXXXXXXVASAVLSTPWFVFVLLSIASFAGGVGQLLYLPDDSVTSVALQTFLFVPLAVILPGVALVTAFITARVQSKS 200

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig103.910.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig103.910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7G0T4_ECTSI	1.570e-109	90.91	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835Z532_9STRA	1.550e-19	50.25	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A0G4F6S3_VITBC	2.910e-6	38.33	Uncharacterized protein n=1 Tax=Vitrella brassicaf...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009500	Protein of unknown function DUF1118	PFAM	PF06549	DUF1118	coord: 55..125 e-value: 5.5E-7 score: 29.9
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 109..128
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 155..165
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 135..154
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 129..134
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 166..186
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 187..286
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..108
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.5
None	No IPR available	TMHMM	TMhelix		coord: 134..153
None	No IPR available	TMHMM	TMhelix		coord: 166..188

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig103	contig	Ecto-sp6_S_contig103:295919..302769 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig103.910.1	mRNA_Ecto-sp6_S_contig103.910.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig103 295859..304892 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig103.910.1 ID=prot_Ecto-sp6_S_contig103.910.1|Name=mRNA_Ecto-sp6_S_contig103.910.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=287bp
MKTVAFACAVAACAGGADAFVGSMRPASSSMRRAGPSSSVRMATDVTVPD
LLKQTEKLKLLSTASKLGLLSKLEAAGLTLKDVEKLLPLVDENDLIGLAK
GVGPDLLKVAPAALSAAPAALPLLAGALGVPGESLYLAGLASFAAGAALV
TVLPDDSVSSIAIETFVAFPLLFVLPAVCGVAGFALTSLKNGSLVDLITS
TASPKPAAASPVASSSAPVAMKASKPSAPAAAPKSSGGRPAAGARSAKAA
PKAKAAPKAAPKKAAPKPPPAAPKPAGNIANLPKAL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009500	DUF1118