mRNA_Ecto-sp6_S_contig103.905.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig103.905.1 vs. uniprot
Match: D7G0U0_ECTSI (Beta-hydroxylase, aspartyl/asparaginyl family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0U0_ECTSI) HSP 1 Score: 664 bits (1712), Expect = 1.920e-237 Identity = 411/442 (92.99%), Postives = 412/442 (93.21%), Query Frame = 1 Query: 1 MRRVAGAVLATTICSRAAVIPAFVAVPPPATTTWSSWHTAERSCSLVPVQSVRQEQDAGAKEXXXXXXTYGGDDQRRFWDTVVKVLRSELGAGENQPEDLSRVWGFVAHNREGKAPPAEPSPSYRATGLYFPGLEAKPWWDDRSEFSWLQDLEDAAPDIKREMEALQRSGGARSYKGGTGEMSTVYDATRGWGTMRIRYMGRFGQPGVNYSLLPRTLAALRRLPLAPETAAFQRQLPGTGLPLHVDPSNFVLGCHVGVVVPPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGRGSANRXXXXXXXXXXXXXXXXXXXXXXXXXESGSAGSTAEXXXAERRSGTGRDGGTERRERSGERAWIEVSGEKRHWEPGRAFVFDPSFLHRTYNPTDGERVILDIDVWHPGLKEVEKTAIRRVCELVEQWNSRSGLFED 1326
MRRVAGAVLATTICSRAAVIPAFVAVPP SSWHTAERSCSLVPVQSVRQEQDAG KE XXXX TYGGDDQRRFWDTVVKVLRSELGAGENQPEDLSRVWGFVAHNREGKAPPAEPSPSYRATGLYFPGLEAKPWWDDRSE SWLQDLEDAAPDIKREMEALQRSGGARSYKGGTGEMSTVYDATRGWGTMRIRYMGRFGQPGVNYSLLPRTLAALRRLPLAPETAAFQRQL GTGLPLHVDPSNFVLGCHVGVVVP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX AGSTAEXXXAERRSGTGRDGGTERRERSGERAWIEVSGEKRHWEPGRAFVFDPSFLHRTYNPTDGERVIL+IDVWHPGLKEVEKTAIRRVCELVEQWNSRSGLFED
Sbjct: 1 MRRVAGAVLATTICSRAAVIPAFVAVPPXXXXXSSSWHTAERSCSLVPVQSVRQEQDAGVKEEXXXXGTYGGDDQRRFWDTVVKVLRSELGAGENQPEDLSRVWGFVAHNREGKAPPAEPSPSYRATGLYFPGLEAKPWWDDRSECSWLQDLEDAAPDIKREMEALQRSGGARSYKGGTGEMSTVYDATRGWGTMRIRYMGRFGQPGVNYSLLPRTLAALRRLPLAPETAAFQRQLAGTGLPLHVDPSNFVLGCHVGVVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XXXXXXXXXXXXXXXXXXXXXXXXXXAGSTAEXXXAERRSGTGRDGGTERRERSGERAWIEVSGEKRHWEPGRAFVFDPSFLHRTYNPTDGERVILNIDVWHPGLKEVEKTAIRRVCELVEQWNSRSGLFED 430
BLAST of mRNA_Ecto-sp6_S_contig103.905.1 vs. uniprot
Match: A0A7S3AKA7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AKA7_9EUKA) HSP 1 Score: 97.1 bits (240), Expect = 2.980e-20 Identity = 74/239 (30.96%), Postives = 91/239 (38.08%), Query Frame = 1 Query: 580 TMRIRYMGRFGQPGVNYSLLPRTLAALRRLPLAPETAAFQRQLPGTGLPLHVDPSNFVLGCHVGVVVPPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKGRGSANRXXXXXXXXXXXXXXXXXXXXXXXXXESGSAGSTAEXXXAERRSGTGRDGGTERRERSGERAWIEVSGEKRHWEPGRAFVFDPSFLHRTYNPTDGERVILDIDVWHPGLKEVEKTAIRRVCELVEQ 1296
TM I Y G P P T+AAL L LA ET AFQRQ PGTGLP HVDP ++VLGCH+GV P E G GS +I V+G K HW+ G +FDPS+ H T+NPT +RVIL+IDV+HP L +E AI+ +L +Q
Sbjct: 2 TMPIYYKGVL-HPEFPADECPATMAALSTLRLAGETVAFQRQSPGTGLPRHVDPCSWVLGCHLGVTCP----------------------------------------------------------------------NEGGEVGSP----------------------------YISVAGTKYHWDDGSVMLFDPSYRHETFNPTSQDRVILNIDVFHPELSALECEAIQLTIDLKKQ 141
BLAST of mRNA_Ecto-sp6_S_contig103.905.1 vs. uniprot
Match: A0A0G4ENV9_VITBC (Asp_Arg_Hydrox domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ENV9_VITBC) HSP 1 Score: 84.0 bits (206), Expect = 2.440e-14 Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 1 Query: 1102 AWIEVSGEKRHWEPGRAFVFDPSFLHRTYNPTDGERVILDIDVWHPGLKEVEKTAIRRVCELVEQW 1299
AWI V EKRHW+PGRA V+D +F H T+NPTD ER +L ID WH L E+ AI R+ L E +
Sbjct: 231 AWIRVGAEKRHWQPGRALVYDTTFQHETFNPTDDERHVLHIDFWHKDLTAAERRAIERLYTLREMF 296
BLAST of mRNA_Ecto-sp6_S_contig103.905.1 vs. uniprot
Match: A0A7S3ZCI2_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZCI2_9EUKA) HSP 1 Score: 77.0 bits (188), Expect = 1.860e-12 Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 388 YFPGLEAKPWWDDRSEFSWLQDLEDAAPDIKREMEALQRSGGARSYKGGTGEMSTVYDATRGWGTMRIRYMGRFGQPGVNYSLLPRTLAALRRLPLAPETAAFQRQLPGTGLPLHVDPSNFVLGCHVGVVVP 783
Y PG+ A + D SEF++++++E +I+ E EAL + + T + GW T+ + Y G PG Y L P T L ++P+A A F RQ PG+G+P+H D +N L C VGV VP
Sbjct: 21 YLPGIPAPSPFRDPSEFAFIKEIEQNIDEIRSEFEALVDANVTTAQF----RSVTSMNYKNGWKTLPLYYNGNT-IPGFPYHLCPVTAGILEKVPVAGRIAGFNRQQPGSGIPMHTDGNNMWLTCQVGVSVP 147
BLAST of mRNA_Ecto-sp6_S_contig103.905.1 vs. uniprot
Match: A0A7S3WKR7_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WKR7_9SPIT) HSP 1 Score: 74.7 bits (182), Expect = 4.430e-12 Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 1093 GERAWIEVSGEKRHWEPGRAFVFDPSFLHRTYNPTDGERVILDIDVWHPGLKEVEKTAIRRVCELVEQ 1296
GE +I V+G+K HW G VFDPSF H T+NPT +R+IL+ID++HP L ++E IR L ++
Sbjct: 97 GETPYIWVAGDKYHWRDGEVMVFDPSFKHETFNPTSQDRIILNIDIFHPELTDLECDVIRETIRLKKE 164
BLAST of mRNA_Ecto-sp6_S_contig103.905.1 vs. uniprot
Match: R1CWD3_EMIHU (Asp_Arg_Hydrox domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CWD3_EMIHU) HSP 1 Score: 73.9 bits (180), Expect = 2.940e-11 Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 1 Query: 1084 ERSGERAWIEVSGEKRHWEPGRAFVFDPSFLHRTYNPTDGERVILDIDVWHPGLKEVE-KTAIRRVCEL 1287
E GE +I V+GEK HW G VFDPSF H T+NPT +R+IL+ID++HP L ++E + IR EL
Sbjct: 152 EEGGETPYISVAGEKYHWREGEVMVFDPSFKHETFNPTSQDRIILNIDLFHPELTDLECRETIRLKKEL 220
BLAST of mRNA_Ecto-sp6_S_contig103.905.1 vs. uniprot
Match: A0A7S2E820_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E820_TRICV) HSP 1 Score: 75.1 bits (183), Expect = 4.600e-11 Identity = 66/205 (32.20%), Postives = 92/205 (44.88%), Query Frame = 1 Query: 205 TYGGDDQRRFWDTVVKVLRSELGAGENQPEDLSRVWGFVAHNREGKAPPAE--------PSPSYRATGLYFPGLEAKPWWDDRSEFSWLQDLEDAAPDIKREMEAL----QRSGGARSYKGGTGEMSTVYDATRGWGTMRIRYMGRFGQPGVNYSLLPRTLAALRRLPLAPETAAFQRQLPGTGLPLHVDPSNFVLGCHVGVVVP 783
T G D FW+ + ++ S+ E+ +L RV GFV H + P + P A Y PGL + + D ++ + + D I+ E EAL R GG ++ T S Y++ GW T+ + Y G P Y L P L +PLA A F RQ PGTG+PLH D +N L C +GV VP
Sbjct: 101 TAGRPDFDPFWELMPSLISSKFPDAEDT--ELVRVAGFVRHALDVNLPLEDDIINDEWRPHDEIHA---YMPGLGPRTPFVDPAKLELCRLMSDNVDVIESEYEALLADMNRPGGRDRFQSVT---SMNYES--GWKTLVLFYNGH-RIPDFPYHLCPTATRILETVPLAGRIAGFNRQRPGTGIPLHSDGNNMWLTCQMGVKVP 294
BLAST of mRNA_Ecto-sp6_S_contig103.905.1 vs. uniprot
Match: A0A7S0JKX7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JKX7_9EUKA) HSP 1 Score: 71.6 bits (174), Expect = 3.700e-10 Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 1105 WIEVSGEKRHWEPGRAFVFDPSFLHRTYNPTDGERVILDIDVWHPGLKEVEKTAIRRVCELVEQ 1296
+I V+G K HW G +FDPSF H T+NPT ER+IL+IDV+HP L ++E AI+ L ++
Sbjct: 231 YIAVAGSKYHWRDGNVMLFDPSFRHETFNPTSQERIILNIDVFHPELTDLECEAIQLTIALKKE 294
BLAST of mRNA_Ecto-sp6_S_contig103.905.1 vs. uniprot
Match: A0A838L046_9SPHN (Aspartyl/asparaginyl beta-hydroxylase domain-containing protein n=2 Tax=Sphingomonas chungangi TaxID=2683589 RepID=A0A838L046_9SPHN) HSP 1 Score: 70.9 bits (172), Expect = 1.150e-9 Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 1 Query: 1105 WIEVSGEKRHWEPGRAFVFDPSFLHRTYNPTDGERVILDIDVWHPGLKEVEKTAIRRVCE 1284
W V E R W G+AFVFD + H NPTD RV+L +DVWHPGL+ E+ A++ V E
Sbjct: 317 WFRVGAETREWHVGQAFVFDDTIEHEACNPTDQLRVVLIVDVWHPGLRSGERHAVQSVME 376
BLAST of mRNA_Ecto-sp6_S_contig103.905.1 vs. uniprot
Match: A0A7S2XJQ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJQ7_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 3.860e-9 Identity = 62/201 (30.85%), Postives = 87/201 (43.28%), Query Frame = 1 Query: 208 YGGDDQRRFWDTVVKVLRSELGAGENQPEDLSRVWGFVAHNREGKAPPA--------EPSPSYRATGLYFPGL-EAKPWWDDRSEFSWLQDLEDAAPDIKREMEALQRSGGARSYKGGTGEMSTVYDATRGWGTMRIRYMGRFGQPGVNYSLLPRTLAALRRLPLAPETAAFQRQLPGTGLPLHVDPSNFVLGCHVGVVVP 783
+G + FW+ + ++ S+ + + L+RV G V H P A +P Y PGL +P+WD ++ Q L+D I +E +AL S Y A GW T+ + Y G P Y L P T L +PLA A F RQ PGTG+PLH D +N L C +G+ VP
Sbjct: 58 HGTPEADPFWELIPSLVASKFPSLTDA--QLTRVAGMVEH-AVSPNPQALLEDDFCNDPWRPQEDIHAYMPGLGPTQPFWDP-AQLPLCQALKDNHDIICQEYQALLLDNADADEDRFQSVTSMNYKA--GWKTLVLFYNGH-RIPEFPYHLCPTTTRLLETVPLAGRIAGFNRQQPGTGIPLHTDGNNMWLTCQMGISVP 251 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig103.905.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig103.905.1 >prot_Ecto-sp6_S_contig103.905.1 ID=prot_Ecto-sp6_S_contig103.905.1|Name=mRNA_Ecto-sp6_S_contig103.905.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=443bp MRRVAGAVLATTICSRAAVIPAFVAVPPPATTTWSSWHTAERSCSLVPVQback to top mRNA from alignment at Ecto-sp6_S_contig103:232449..235126- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig103.905.1 ID=mRNA_Ecto-sp6_S_contig103.905.1|Name=mRNA_Ecto-sp6_S_contig103.905.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2678bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:232449..235126- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig103:232449..235126- >mRNA_Ecto-sp6_S_contig103.905.1 ID=mRNA_Ecto-sp6_S_contig103.905.1|Name=mRNA_Ecto-sp6_S_contig103.905.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1329bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:232449..235126- (Ectocarpus species6 EcLAC_371)back to top |