Homology
BLAST of mRNA_Ecto-sp6_S_contig103.901.1 vs. uniprot
Match:
D7FXU6_ECTSI (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXU6_ECTSI)
HSP 1 Score: 886 bits (2290), Expect = 0.000e+0
Identity = 550/559 (98.39%), Postives = 550/559 (98.39%), Query Frame = 1
Query: 1 MLVLFETPAGYALFKMTNESILKDADGIYDEFCTPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIVKKELKDKLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTSVGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLRQLEGGARLLEAAPKTPTQVKKYDSKAAVAGTPKTFSTGEDMVEVKEEGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXSPTXXXXGDLEXXXXXXXXXXXVGGDVDEAGDSGEASAAAAAPSSXXXXXXXXXGGDVGAEVDGDGGEGSXXXXXXXXXXEEA 1677
MLVLFETPAGYALFKMTNESILKDADGIYDEF TPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIVKKELKDKLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTSVGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLRQLEGGARLLEAAPKTPTQVKKYDSKAAVAGTPKTFSTGEDMVEVKEEGSEXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXX XXXXXXXXXXXVGGDVDEAGDSGEASAAAAAPSSXXXXXXXX GGDVGAEVDGDGGEGSXXXXXXXXXXEEA
Sbjct: 1 MLVLFETPAGYALFKMTNESILKDADGIYDEFSTPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIVKKELKDKLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTSVGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLRQLEGGARLLEAAPKTPTQVKKYDSKAAVAGTPKTFSTGEDMVEVKEEGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGDVDEAGDSGEASAAAAAPSSXXXXXXXXVGGDVGAEVDGDGGEGSXXXXXXXXXXEEA 559
BLAST of mRNA_Ecto-sp6_S_contig103.901.1 vs. uniprot
Match:
A0A835YZD1_9STRA (Nop domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD1_9STRA)
HSP 1 Score: 622 bits (1603), Expect = 6.950e-215
Identity = 331/446 (74.22%), Postives = 377/446 (84.53%), Query Frame = 1
Query: 1 MLVLFETPAGYALFKMTNESILKDADGIYDEFCTPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIVKKELKDKLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTSVGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLRQLEGGARLLEAAPKTPTQVKKYDSKAAVA-GT----PKTFSTGEDMV 1323
ML LFETPAGYALFK+ +E ++++ + EF TPEKAA+ VKL AF F DTA AVAA+ +MI+ KMGK+ KFLTKN+VKKELKDKLAV+DSKL IKDKL IKC+NDSGVMELMRGIR QLDGLL VG+ NLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRV+EW+GWHFPEMAKI+NDNM YAK V+RMG R C+ DFSDI+ D+ + LKE AE+SMGTEIT +D+ SI +LA+QVVALSEYR+QL +YL++RM AIAPNLTI+VGELVGARLIAHAGSL+NLAK PAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APKNKGK+SRVLAAK ALA+RVDA+ + TDTT+G+ESR+KVE R+RQLEGG RL A KTP VKKYD KAA A GT P ++ EDMV
Sbjct: 1 MLALFETPAGYALFKIADEGKVQESKDLAKEFETPEKAAKMVKLLAFSAFEDTASAVAAAADMIEGKMGKASAKFLTKNMVKKELKDKLAVADSKLGGVIKDKLEIKCINDSGVMELMRGIRLQLDGLLVGVGEQNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPEMAKILNDNMHYAKCVLRMGTRDRCRAHDFSDIIGDDAIEHTLKENAEISMGTEITEMDLKSISALAEQVVALSEYRIQLYDYLKNRMAAIAPNLTILVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKNKGKVSRVLAAKTALAVRVDAMGETTDTTLGLESRAKVEARIRQLEGGTRLATAGAKTPVGVKKYDPKAAKATGTNGAAPPVYNEAEDMV 446
BLAST of mRNA_Ecto-sp6_S_contig103.901.1 vs. uniprot
Match:
M4C0Z6_HYAAE (Nop domain-containing protein n=29 Tax=Peronosporaceae TaxID=4777 RepID=M4C0Z6_HYAAE)
HSP 1 Score: 552 bits (1422), Expect = 3.440e-187
Identity = 291/440 (66.14%), Postives = 352/440 (80.00%), Query Frame = 1
Query: 1 MLVLFETPAGYALFKMTNESILKDADGIYDEFCTPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIVKKELKDKLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTSVGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLRQLEGGARLLEAAPKTPTQVKKYDSKAAVAGTPKTFSTGEDM 1320
MLVLFET AG+ALFK+ +E+ L AD ++ +F T EKA + VKLK F F DT +AVAA+T+M+D KMGKSL+KFL KN+V LKDKLAVSD L IK+KLSI CVNDS V E+MRGIR ++ L+T + DD+LKAM LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTY+MRV+EWFGWHFPEM KI+ DN+ YAK V++MG+R++ K+ DFSD++ ED+ ++E EVSMGT+I+ D+ +I +L +QV++L+EYR QL +YL++RM AIAPNLT+MVGELVGARLIAHAGSL+NLAK PASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APK+KGKISRVLAAK ALA+RVDAL D T+ TIG ++R+KVE R+RQLE G P + +VK K T T++T DM
Sbjct: 1 MLVLFETAAGHALFKVQDEAKLASADDVFKQFATSEKATKVVKLKGFNAFKDTIEAVAAATDMVDGKMGKSLRKFLKKNVVDAGLKDKLAVSDKALGALIKEKLSIACVNDSAVNEIMRGIRANMNTLITGLKDDDLKAMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYSMRVREWFGWHFPEMGKIVTDNLQYAKCVLKMGMRSQVKSLDFSDVLS-EDVEASMREVCEVSMGTDISQEDLTNISALCEQVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKVEARMRQLENG---FSGVPNSNGKVKNEAKKYTKTETSTTYNTDADM 436
BLAST of mRNA_Ecto-sp6_S_contig103.901.1 vs. uniprot
Match:
K3WSU8_GLOUD (Nop domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSU8_GLOUD)
HSP 1 Score: 544 bits (1401), Expect = 7.930e-184
Identity = 290/441 (65.76%), Postives = 353/441 (80.05%), Query Frame = 1
Query: 1 MLVLFETPAGYALFKMTNESILKDADGIYDEFCTPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIVKKELKDKLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTSVGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLRQLEGGAR-LLEAAPKTPTQVKKYDSKAAVAGTPKTFSTGEDM 1320
MLVLFET AG+ALFK+ +ES L AD ++ F T +KA + +KLK F F DT +AVAA+T+M+D K+GK+LKKFL KNIV LKDKLAVSD L IK+K+ I+CV+D+ V E+MRGIR ++ L++ + D++LK+M LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRV+EWFGWHFPEM KI+ DN+ YAK V++MGVR+ KN DFSDI+ ED+ ++E EVSMGT+I+ D+ +I SL +QV++L+EYR QL +YL++RM AIAPNLT+MVGELVGARLIAHAGSL+NLAK PASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APK+KGKISRVLAAK ALA+RVDAL D T+ TIG ++R+KVE R+RQLE G + KT +VKKY T KT++T D+
Sbjct: 1 MLVLFETAAGHALFKVQDESKLASADDVFKHFETADKANKVLKLKGFNAFKDTTEAVAAATDMVDGKVGKALKKFLKKNIVDAGLKDKLAVSDKALGGLIKEKMGIQCVHDTAVNEVMRGIRANMNSLISGLEDEDLKSMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWFGWHFPEMGKIVTDNLQYAKCVLKMGVRSNVKNLDFSDILS-EDVEASMREVCEVSMGTDISEEDVTNISSLCEQVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKVEARVRQLENGLTGAVSGKGKTKNEVKKY----VKPETTKTYNTEADI 436
BLAST of mRNA_Ecto-sp6_S_contig103.901.1 vs. uniprot
Match:
A0A8K1CTM6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTM6_PYTOL)
HSP 1 Score: 543 bits (1399), Expect = 1.590e-183
Identity = 288/450 (64.00%), Postives = 356/450 (79.11%), Query Frame = 1
Query: 1 MLVLFETPAGYALFKMTNESILKDADGIYDEFCTPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIVKKELKDKLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTSVGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLRQLEGGAR-LLEAAPKTPTQVKKYDSKAAVAGTPKTFSTGEDMVEVKEEGSE 1347
MLVLFET AG+ALFK+ +ES L +AD ++ F TPEKA + +KLK F F DT +AVAA+T+M+D K+GK LKKFL KNIV LKDKLAVSD L IK+KL I+C++D+ V E+MRG+R ++ L++ + D++LK+M LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTY+MRV+EWFGWHFPEM KI+ DN+ YAK V++MG+R++ KN DFSDI+ ED+ ++E EVSMGT+I+ D+ +I SL +QV++L+EYR QL +YL++RM AIAPNLT+MVGELVGARLIAHAGSL+NLAK PASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APK KGKISRVLAAK ALA+RVDAL D T+ +IG ++R+KVE R+RQLE G ++ KT + KKY A K ++ DM K+ S+
Sbjct: 1 MLVLFETAAGHALFKVQDESKLANADDVFKHFQTPEKANQVLKLKGFNAFKDTTEAVAAATDMVDGKVGKGLKKFLKKNIVDAGLKDKLAVSDKALGGIIKEKLGIQCIHDTAVNEIMRGVRANMNSLISGLEDEDLKSMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYSMRVREWFGWHFPEMGKIVTDNLQYAKCVLKMGMRSQVKNLDFSDILS-EDVEASMREVCEVSMGTDISEEDVTNIASLCEQVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKYKGKISRVLAAKTALAVRVDALGDATEASIGYDNRAKVEARVRQLENGLTGVISGKGKTKNEAKKY----VKADGAKNYNAEADMTVSKKRKSD 445
BLAST of mRNA_Ecto-sp6_S_contig103.901.1 vs. uniprot
Match:
A0A812NHD2_SYMMI (NOP5-2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NHD2_SYMMI)
HSP 1 Score: 543 bits (1399), Expect = 2.490e-183
Identity = 292/442 (66.06%), Postives = 352/442 (79.64%), Query Frame = 1
Query: 1 MLVLFETPAGYALFKMTNESILKDADGIYDEFCTPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIVKKELKDKLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTSVGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLRQLEGG-ARLLEAAPKTPTQVKKYDSKAAVAGTPKTFSTGEDMV 1323
ML+LFET AGYALFK+ L + I+D F +K A VKLKAF F +T +AV A+T +I++K+ K+LKKFL KNI+ K ++D+LAV+D+KL +K+K+ I+CV+ VME+ RGIR Q+D LL V D L++M+LGLSHSLSRYKLKFSADKVD MIVQAIGLLD+LDKEINTYAMRV+EW+GWHFPEMA+I++DNM YAK+V+RMG+RTECK DFSDI+ DE + + LK+ AE SMGTEI+ D+ +IK+L +QV++LSEYR+QL +YL++RM AIAPNLT+MVGELVGARL+AHAGSL+NLAK PASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APKNKGKISRVLAAK ALAIRVDAL D + TI +ESR KVE R+RQLEGG RL A P KYD+ A A P FS DMV
Sbjct: 1 MLLLFETSAGYALFKV-QAGKLGEVSDIWDAFQEKDKGANIVKLKAFEPFENTTEAVVAATSLIENKLDKNLKKFLKKNIISKSVEDELAVADTKLGGLLKEKMDIQCVHSDKVMEIFRGIRSQMDTLLAGVEDGALRSMQLGLSHSLSRYKLKFSADKVDIMIVQAIGLLDDLDKEINTYAMRVREWYGWHFPEMARILSDNMFYAKIVLRMGMRTECKKYDFSDILGDETLEETLKKTAETSMGTEISESDLTNIKALCEQVISLSEYRIQLFDYLKNRMAAIAPNLTMMVGELVGARLVAHAGSLLNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKNKGKISRVLAAKTALAIRVDALGDSSGPTIAVESRLKVEARIRQLEGGQGRLSIAGGAGPA---KYDAATARALAPPKFSDASDMV 438
BLAST of mRNA_Ecto-sp6_S_contig103.901.1 vs. uniprot
Match:
A0A4D9DD53_9STRA (Nop domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DD53_9STRA)
HSP 1 Score: 543 bits (1398), Expect = 6.330e-183
Identity = 295/452 (65.27%), Postives = 355/452 (78.54%), Query Frame = 1
Query: 1 MLVLFETPAGYALFKMTNESILKDADGIYDEFCTPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIVKKELKDKLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTSVGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLRQLEGGARL-----LEAAPKTPTQVKKYDSKAAVA-GTPKTFSTGEDMVEVKEE 1338
ML+LFETPAGYALFK+ ES L+D + ++ EF PEKA+ VKLKAF F TA+AVAA++++I+S +GK LKKFL K+I KE+ ++LAV+D KL IKDKL + EL RG+R QLD LLT + D NLK M+LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRV+EW+GWHFPE+ KI+NDN+ YAK+VVR+G+RT K+ D SDI+ D+ + + +KE+AE+SMG EI+ D+ SI+SLA +VV L+ YR+ L EYL++RM AIAPNLTIMVGELVGARLIAHAGSL+NLAK PAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQA PK+KGKISRVLAAK ALAIRVDA+ DETDT++G E+RSKVE RLRQLEGG + + + KYD KAA+ G ++ DMV V E
Sbjct: 1 MLLLFETPAGYALFKVLKESKLQDVENLWKEFEDPEKASSIVKLKAFRPFDGTAEAVAAASDIIESNLGKELKKFLKKSIKDKEMSEQLAVADHKLGGLIKDKLGLNIATGEIASELFRGVRTQLDSLLTGLSDSNLKQMQLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPELVKIVNDNVQYAKLVVRVGMRTGFKSQDLSDILGDDAVEQSVKESAEISMGQEISENDLASIRSLAQEVVDLAAYRINLFEYLKNRMHAIAPNLTIMVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAQPKHKGKISRVLAAKTALAIRVDAMGDETDTSMGEEARSKVEFRLRQLEGGHKTSLTGGMRGSSSGNGGPAKYDKKAALGEGEGDGYNEASDMVGVTTE 452
BLAST of mRNA_Ecto-sp6_S_contig103.901.1 vs. uniprot
Match:
L1JQ19_GUITC (Nop domain-containing protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JQ19_GUITC)
HSP 1 Score: 536 bits (1382), Expect = 5.400e-181
Identity = 287/444 (64.64%), Postives = 352/444 (79.28%), Query Frame = 1
Query: 1 MLVLFETPAGYALFKMTNESILKDADGIYDEFCTPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIVKKELKDKLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTSVGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLRQLEGGARL-LEAAPKTPTQVKKYDSKAAVAGTPKT---FSTGEDM 1320
MLVL+ETPAGYALFK+T+E LKD D I + F P+KA++++KLKAF F DT++A+ A+T M++S + K LKKFL KNIVKK L ++LAV ++KL IK+KL + C+ D V+E+MRG+R L+ LL + +LK MRLGL+HSL R+KLKFS DKVDTM+VQAIGLLDELDKE+NTYAMRV+EW+GWHFPEM KI+ +N+ YAKVV MG+RT C +CDFS I+ DE+ ++LKEA ++SMGTEI+ DI +I+SL DQV+ LSEYR+QL EYL +RM+AIAPNLT MVGELVGARLIAHAGSL+NLAK PASTVQILGAEKALFRALK+KHDTPKYGLIYHASLIGQAAPK+KGKISRVLAAKCAL+IRVDAL+ +G+E R VE RLRQLEGG L + K KKY+SKA G K+ ++ EDM
Sbjct: 1 MLVLYETPAGYALFKVTDEKKLKDVDDIQEVFADPDKASKAMKLKAFQKFEDTSEALVAATAMLESSLSKGLKKFLEKNIVKKGLNEELAVYETKLGKVIKEKLEVPCIYDDKVLEIMRGVRANLEVLLGGTTEQDLKTMRLGLAHSLGRHKLKFSPDKVDTMVVQAIGLLDELDKELNTYAMRVREWYGWHFPEMGKIVTENVPYAKVVKLMGMRTNCVSCDFSSIL-DEETEQELKEAVQISMGTEISDDDINNIQSLCDQVIQLSEYRVQLYEYLLNRMRAIAPNLTTMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKSKHDTPKYGLIYHASLIGQAAPKHKGKISRVLAAKCALSIRVDALSQGDIPQVGVEHRLAVENRLRQLEGGTITNLSGSAKGKPNAKKYESKADEDGMAKSSSKYNDAEDM 443
BLAST of mRNA_Ecto-sp6_S_contig103.901.1 vs. uniprot
Match:
A0A7S1U4X5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4X5_9STRA)
HSP 1 Score: 533 bits (1372), Expect = 1.030e-179
Identity = 277/407 (68.06%), Postives = 335/407 (82.31%), Query Frame = 1
Query: 1 MLVLFETPAGYALFKMTNESILKDADGIYDEFCTPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIVKKELKDKLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTSVGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLRQLEGGARL 1221
MLVLFETPAGYALFK T+ +K D +Y EF T +KA+ +KLKAF F D +AVAA+T +++ + K LKKFL KN+VKKELKD+LAV D+KL IK+KL I+CV ++G+ EL+RGIR Q+D L+ +V + ++ M+LGLSH LSRYKLKFS DKVDTMIVQA+GLLD+LDKEINTYAMR +EW+GWHFPEM K+IND + Y++ V +MG+RT C DFSDI+ED + LK+AA SMGTEI+ D+ +I++L DQVV LSEYR+QL EYL++RM AIAPNLT+MVGELVGARLIAH+GSL+NLAK PASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APK+KGKISRVLAAK ALAIRVDAL + TIGIE+R+KVE R+RQL+GGARL
Sbjct: 12 MLVLFETPAGYALFKCTSPGKIKKTDDLYKEFETADKASSLLKLKAFSQFEDITEAVAAATALVEGSLHKGLKKFLNKNVVKKELKDELAVIDAKLGGLIKEKLGIECVANAGINELIRGIRSQMDALIPAVDESIMRTMQLGLSHQLSRYKLKFSPDKVDTMIVQAVGLLDDLDKEINTYAMRAQEWYGWHFPEMKKVINDTIQYSRCVRKMGMRTNCAATDFSDILEDTSVEALLKDAAMTSMGTEISEGDLNNIQALCDQVVNLSEYRVQLFEYLKNRMHAIAPNLTVMVGELVGARLIAHSGSLLNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKSALAIRVDALGETEGPTIGIEARAKVEARIRQLDGGARL 418
BLAST of mRNA_Ecto-sp6_S_contig103.901.1 vs. uniprot
Match:
A0A067CC41_SAPPC (Nop domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CC41_SAPPC)
HSP 1 Score: 524 bits (1349), Expect = 3.690e-176
Identity = 283/450 (62.89%), Postives = 346/450 (76.89%), Query Frame = 1
Query: 1 MLVLFETPAGYALFKMTNESILKDADGIYDEFCTPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIVKKELKDKLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTSVGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLRQLEGG-ARLLEAAPKTPTQVKKYDSKAAVAGTPKTFSTGEDMVEVKEEGSE 1347
MLVLFET AG+ALFK+ +E L + D I+ F + +KA++ VKLKAF F DT +AVAA+ + D +GKSLKKFL K++ + DKLAV D IK+KL I+CV+D V ELMRGIR ++ L++ + D +LK M LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRV+EWFGWHFPEM KI+ DN+ YA+ VV+MGVRT K+ DFSDI+ D+ ++E EVSMGT+I+ D+++I SL +QV++L+EYR QL +YL++RM AIAPNLT+MVGELVGARLIAHAGSL+NLAK PASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APK+KGKISRVLAAK ALA+RVDAL D T+ TIG ++R+KVE R+RQLE G + K T KKY +A A K ++ +DM K+ +E
Sbjct: 1 MLVLFETAAGHALFKVQDEGKLANVDDIHKHFASSDKASQVVKLKAFNAFKDTTEAVAAAADCTDGTVGKSLKKFLKKHVKDAGVSDKLAVMDKAFGGIIKEKLGIQCVHDKSVDELMRGIRTHMNSLISGLEDQDLKNMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWFGWHFPEMGKIVTDNLQYARTVVKMGVRTNVKSLDFSDILSS-DVEASMREVCEVSMGTDISEEDVINIGSLCEQVISLTEYRGQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKVEARMRQLENGFTGIASGKGKAKTDAKKYVKEATPAT--KVYNDADDMKVQKKRKAE 447
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig103.901.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 0.00e+0 / Id = 98.39 Expect = 6.95e-215 / Id = 74.22 Expect = 3.44e-187 / Id = 66.14 Expect = 7.93e-184 / Id = 65.76 Expect = 1.59e-183 / Id = 64.00 Expect = 2.49e-183 / Id = 66.06 Expect = 6.33e-183 / Id = 65.27 Expect = 5.40e-181 / Id = 64.64 Expect = 1.03e-179 / Id = 68.06 Expect = 3.69e-176 / Id = 62.89 Sequence D7FXU6_ECTSI A0A835YZD1_9STRA M4C0Z6_HYAAE K3WSU8_GLOUD A0A8K1CTM6_PYTOL A0A812NHD2_SYMMI A0A4D9DD53_9STRA L1JQ19_GUITC A0A7S1U4X5_9STRA A0A067CC41_SAPPC Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 894.8 Seed ortholog evalue 2e-257 Seed eggNOG ortholog 2880.D7FXU6 Preferred name NOP58 Model size 2361 KEGG ko ko:K14565 KEGG Pathway ko03008,map03008 Hectar predicted targeting category other localisation GOs GO:0000154,GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0001085,GO:0001091,GO:0001094,GO:0001098,GO:0001099,GO:0001650,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005732,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006403,GO:0006725,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0015030,GO:0016049,GO:0016070,GO:0016072,GO:0016604,GO:0019899,GO:0022613,GO:0030490,GO:0030515,GO:0030684,GO:0030686,GO:0031428,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0033036,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0046483,GO:0048254,GO:0051117,GO:0051179,GO:0070013,GO:0070761,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:1901360,GO:1901363,GO:1990904 Exons 13 EggNOG free text desc. endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) EggNOG OGs COG1498@1,KOG2572@2759 Ec32 ortholog description NOP58 subunit of the C/D ribonucleoprotein complex Ec32 ortholog Ec-23_001460.1 Cds size 1680 COG Functional cat. J Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko03009
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348741.117818-UTR-Ecto-sp6_S_contig103:199127..199808 1682348741.117818-UTR-Ecto-sp6_S_contig103:199127..199808 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig103 199128..199808 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348741.1294641-CDS-Ecto-sp6_S_contig103:199808..199850 1682348741.1294641-CDS-Ecto-sp6_S_contig103:199808..199850 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 199809..199850 - 1682348741.1387856-CDS-Ecto-sp6_S_contig103:200225..200531 1682348741.1387856-CDS-Ecto-sp6_S_contig103:200225..200531 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 200226..200531 - 1682348741.1478329-CDS-Ecto-sp6_S_contig103:201217..201298 1682348741.1478329-CDS-Ecto-sp6_S_contig103:201217..201298 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 201218..201298 - 1682348741.156517-CDS-Ecto-sp6_S_contig103:201844..201916 1682348741.156517-CDS-Ecto-sp6_S_contig103:201844..201916 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 201845..201916 - 1682348741.1651003-CDS-Ecto-sp6_S_contig103:202098..202272 1682348741.1651003-CDS-Ecto-sp6_S_contig103:202098..202272 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 202099..202272 - 1682348741.1745477-CDS-Ecto-sp6_S_contig103:202715..202931 1682348741.1745477-CDS-Ecto-sp6_S_contig103:202715..202931 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 202716..202931 - 1682348741.1835423-CDS-Ecto-sp6_S_contig103:203529..203622 1682348741.1835423-CDS-Ecto-sp6_S_contig103:203529..203622 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 203530..203622 - 1682348741.19255-CDS-Ecto-sp6_S_contig103:204174..204276 1682348741.19255-CDS-Ecto-sp6_S_contig103:204174..204276 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 204175..204276 - 1682348741.2011101-CDS-Ecto-sp6_S_contig103:205163..205280 1682348741.2011101-CDS-Ecto-sp6_S_contig103:205163..205280 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 205164..205280 - 1682348741.2086065-CDS-Ecto-sp6_S_contig103:206064..206277 1682348741.2086065-CDS-Ecto-sp6_S_contig103:206064..206277 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 206065..206277 - 1682348741.2160594-CDS-Ecto-sp6_S_contig103:206941..207070 1682348741.2160594-CDS-Ecto-sp6_S_contig103:206941..207070 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 206942..207070 - 1682348741.2231746-CDS-Ecto-sp6_S_contig103:208442..208532 1682348741.2231746-CDS-Ecto-sp6_S_contig103:208442..208532 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 208443..208532 - 1682348741.2304332-CDS-Ecto-sp6_S_contig103:209506..209551 1682348741.2304332-CDS-Ecto-sp6_S_contig103:209506..209551 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig103 209507..209551 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig103.901.1
>prot_Ecto-sp6_S_contig103.901.1 ID=prot_Ecto-sp6_S_contig103.901.1|Name=mRNA_Ecto-sp6_S_contig103.901.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=560bp
MLVLFETPAGYALFKMTNESILKDADGIYDEFCTPEKAAESVKLKAFMTF back to top mRNA from alignment at Ecto-sp6_S_contig103:199128..209551-
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig103.901.1 ID=mRNA_Ecto-sp6_S_contig103.901.1|Name=mRNA_Ecto-sp6_S_contig103.901.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=10424bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:199128..209551- (Ectocarpus species6 EcLAC_371)ATGTTGGTTCTCTTCGAGACGCCGGCGGGCTACGCCTTGTTCAAG GTTTG
TGCATTCATCGGAAAGCATGGGCTACGATTTTCTTTGGGATAAAGCGCTA
CCTTGTGGTGCAGTCATGTTTTTTTGTTGGAGCAGCGGCACCACCACCAC
AGCGCCATTGTGTGCGTGTGGCCATCAAAGGATATTCACCCTCTCCCCGA
CGGTTGTTCTCGCCAAATCAGCGGCTGCGGCGTGCTGGCACAAGCCCCGC
AGCAGCGTCTAGGCCGTATGGCGAAAGAAGTGCCGTTCACATAGCTACAT
CTACCCAGTAGCAAGGATTTCTTGTGTTCGAGCGCTTTGTACGCAATAGT
AGTAGGGCTCCCGGTGGTGGTCTCCACCCCGTCAGTTTCGTGGCTGGAAG
TGGGCATGTCCACGCGGCCCTCTTTTTGCTCAGCTGCTGACTGGCAGATA
CCAAGCGAATGCGAGAAATCCAACCTCTGGGGCGCCTACATGTAGGGCGT
GAGTGGTGCGGGTGTTGTTCACTGTGAGAGAATGTGTAGGATACAGTAGA
GAACGCTTGCAAATTGCTGTCTTGTGACGTAAGATAGCACACCCCCTTTT
GGGCCGATTTTCAAACATCGACTCCCCCATATCGAAGAGGGTGTATCAAA
TCAAATCACACACCATATGCATACGTTGGTCGGAAAGTGCTCGAAGAGAC
GACTTCAACGCCGCCATTTTCTTTTGCTCCGCCGATTCTGCTGTGGTGAA
GTGCGGCGGTAGTCGAGCTTTGGCAAGTCAGTCCATGTTGTGTGACACAC
GTTCGAAGGATGTCACCGTCATATGCATCAATGCATGCATATGTCACCTA
CAATCAGCACGTTCCTTGCCTGTGCACGAGATTTGGTCTTGTTATTTGGT
GCGGGTTGCGGCGGCAGCAGTCCAACTCGTCGACCCGTTGTGCACACTTT
TTCTTTTTTCTGCTTTGCGTCATATCACTGCTGTTGACTCCTACTGCGAC
TGCTGTTATCTATCTACAGATGACTAACGAGTCCATCCTCAAGGACGCGG
ACGGCATCTACGACGAGTTCTGCACCCCCGAGAAGGCGGCGGAATCCGTC
AAGCTGAAG GTGGGCTACTGTTTCACCGTAACTGTCTAAAGGGCTGTTTT
TATCTTGCTGGGTAGAAGATTGAGGCGGTAAGTTGGAAGGTGCGCGGGAT
GAGAAATGGAAGTGTATTGAATACTTACAGCTGTTTGTGTTCAGGGGGAT
TGGTTCGGGCACAGAAGGCGTCACCGCGGGCAAGGGGATGTTACGGCTGT
AAAAGGGGAGGGTTGTTGTGCTTAAACGGTGAAGGTCATGGGGGTGCGAG
CAGGATGCTTGGATACCTTCTCCTATGTTGCCCGCCGCGTTACATGCTTG
GCCCGGTGAGGTTGTCTTTATTCACTGCGAAATGCGCTTGACGTTTTGTC
ATCGAGACACACAACGTGTTAGACTATGTAGTCAGCTTGGGTTCTCTTAC
TAGACAAATATCAACGACAATGTCGCTGGTATCTGGTGGTAGTAGTGGTG
GTGCTGCTGTTGCGGCGTTGGTGTTGTCGCATGCACAGATGGACGAACGC
GGTGTGGTGTGGCTTGGAGCTCAAGGCTTCAGTCCTTTCGGACAACTCGA
TCGTTTACACGGCCAACTCCGTGGTTGTGTCAGCTGATAAGATACACGCA
CATCAAAAAGTATGTATGTGCATGTATGTTATCAGCAGACACAACGCCGG
ACTTGGCCGTGTATGTGATCTTGTTGTTGCCCCGAGAGGGCTGAGCCTTG
AGTTTCAAGCCGCTCAGCACCGCGTTTGTCCAGCTGTGCATGTGAGAACA
CCAAAGCCACAGCAGCAGCACCAGCAGACGTCAGCAGACGTCAGCGTCAT
GGTGAGACGCACATACATGTCGGTTGCGTTTCGGGAGTAGCCTATTTCTC
AGGCGCGAGCACCTTGAGGCAGATAGGTCCTGGTGTTGCAAGCATGCCGT
AGTGACGAGGAACGTTTACTTTTTTTTTGTTGTATTGAAATGGTGCAGGC
CATTTGACGGTCTAGAGGAAGCTCGCCTCTCTCATTAGCACTGTTTTCAT
TTTGTAAGAACGTGTGTATTGTGTTGACGAAATTTTGGGTGCAGGATATA
GTGACGCGGCCTTGAATTTTCTGTTATCTTTGAATCCTAACCAGGTTTCA
ACGCCGTTTGTTGTGAGAATTTTCTGGACTATACTTGTACACTACACTGA
CATGCTTGATCAGCCTGTTTAATGGAATCGGTTGCCTCCACTGGCATCCT
TGCATTTTCTCGTTGGGTCTTTCAAATCTCGTGTGGCCTTCCTCCTGTAT
GACCCCGGCTGTCACGTCAAGCATGCACTTCGACCAAAGGGTGAGCCATA
GACTGGTGTCAGGGTGAGTTGGATTAACACACACACGCTGGCCTGCACGT
TGTGATGTCTTGCCCCCCCCCCCCCTGGCAGGCGTTCATGACTTTCGCAG
ACACGGCGGACGCCGTCGCGGCATCTACAGAGATGATCGACAGCAAGATG
GGCAAGAGCCTCAAGAAGTTTCTGACGAAAAACATCGTCAAGAAGGAGCT
CAAGGATAAG GTGGGCGTGGTGTGTTCCTAGAGCTACGGTAGTTCGCCTG
CTACTGGTGTTGGTGGTGGTTGTGGTGTTGCAGTTCTTTTTGCAGTTCTT
TTTGCAGTTCTTGTTGCTTGTCTATTGCATGTGCACGTTCTGCCCGTGCG
GGTGTTGGCGTGACATCACGTTGTCGTTCCAAGTCCTCTCCAAAGCACGT
ATTGGGGCAGGGCAGGCCGACGTACATCGGCGGGGGTCAAGGGAGAATGC
TCAGCCTCACTGGCTGTTCTGTCATGGATGGTGGCGTGACAGATGTAGAT
GATTAATTCCTGGTGAAACCCGCAGCACCAGAAGCGGACGTCCGTCCTTG
ATTTTTCACGAGCGTTCTTGTGCCTCTGCGCTGTGACCGCCGCTGATACG
TCGAACGCATGCCGAATCGTTTCGGCTGGAGCCAGAAGTAGAGGACGCGA
AAGCAAAGCCACGCCGACCAATGGATCCGCACCCCACTCTCATTCCCGAT
CAAGCTTCAACGTCGGAGTCTATCGCCCTGCTACCGCTAAGCTAAAGTCA
AGGCCCGCTGCTACGGCTCCCTTATCACCACACCTCGTTTCACGAATCCC
TCTCCCCTCTCCCCTCTCCCCTCTCCCCTCTCCCCTCTCCCCTCTCCCCT
TCCCCTTCCCCTTCCCCGAAACAGCTCGCGGTGTCGGACTCGAAGCTCGC
GAACGCCATCAAGGACAAGCTGTCCATCAAGTGCGTCAACGACTCGGGCG
TCATGGAGCTCATGCGAGGGATCAGGGGCCAGCTGGACGGCCTGCTTACC
TCCGTCGGCGACGACAACCTCAAGGCGATGCGCCTGGGTCTCAGCCACTC
GCTCTCCCGGTACAAGCTCAAGTTCTCGGCGGACAAG GTGCGAAGGAAGG
CCTAGAGGGGGAGTGCAGCCGTTTATGGTGGCTTTGCTTTCCCGCTAAAT
AGTGACGGGCGGTGTAGATTTTGGCGGGCGCGTTGGGCCTGGAAGAAGCC
GTCCTTTCGAATCACGGTGCGCGGGTCATTGGGGTTTTATGCGGACCACG
TGCGGACTCGAGCTAGATTTTGTTTTGGTTGGTGGAGCTCCTTGCTCTTC
GATGGCGGCGGTGATGGTGGTGTATTGGTGGCGTGTTTCACTTTTTTTCT
TTTTGATCGGTTATGGTTGATCTGGCACACAACTCACGTGTTGGATGCTG
AGTTCTGGCTGATGTCGTCGTTGTTGCTGTTGGTACTGCTCGTCATTTTC
GGAGTTGGTCGTGGTGGTGATGTCAGCACAACTAAATAAATACTTGTAGC
TGTTGTGTTTCTTGTCTCCCATGTTTCCGATGCAGGTTGTAAGACGAAGA
GAACCGCCGTGTACTGTGGCTCACCTCCGCTGAAAACTGCTCCTGTCGCG
CTCCTTTGGTTGATCGTTTGTTGTTCTACATGGTTGTGTTGTGACGGCTG
TCCTGCTCTTTTGGTTTGATTTGTCAGGGTCGATGGTTATGTCGTGACTC
TTGCCCTGCTCTTTATGGTATTTATGCCATTGTCCGTGTTTGTGTTGTGA
CTACTCTTCAGCTCTTTTGGTTTGATTTGTCAGGGCCCATTGTTGTGTCG
TGACTCTTGTCCTGCCCTCTTTTGGTTTGTTTGTCATTGTGCGTGTTTGT
GTGGTGTTGCCCGGACGACAGGTGGACACGATGATCGTGCAGGCGATTGG
ACTCCTCGACGAGCTGGACAAGGAGATCAACACCTACGCCATGCGCGTCA
AGGAGTGGTTCGGATGGCACTTCCCGGAAATGGCGAAG GTGAGGTTTTAT
CATGACCCTATTCAAGGTCGGTAAAGTCGCTTGGTACAGATGAAACATTC
AAATTTGTCGCAATCTCCCAACAGTGCCGAGTGCCCGGTAAGGCAGGCAT
TTTCCCTTGGACCAGCCTTATACAGGGACCTCTACTGTAACTCTTTCAGG
CGTGCGTAGATGTGCGTTTGCTGTCTGTTGCGAAGAATGCTGTGGTTATG
GAGCCGTCTGGGTGTCCTGACTGCTGAGTTAGAGGGGACAACGGTCTGGA
AGTCAGGATGGTGGCGATGTTCTTGGCCGCTTTCCCCCCCCCTCTTTACG
CTCTCTCTCCCAGCTCCTGATTTTTGTTTTTTTTTCGTTTTCGAGCATGG
TGCCGTCGAAGCAGGCCATGACCGTTGTGACTTGTTCCCGCGCTGGCTGT
AAATACACAATCCCTGTGTGCTAAGTCTATGAAGATCGTTGTTTGACTTG
ATTTCCATCTCAGGCGAATGAATGTCCTTGCTGTCGATGTTTGCAGTCAC
GATTGATTCTCTTGCTGACATTTCAAGCGACAAAGCCTTGCTGTTTTGGT
CGTGGCGCTTTTGCGGTTACGCTTGGTGTCTCTCGGAATGCTACATGTAT
TCGTCGAGAACCGCTGTGAACGACACGACGCACGCCAAGTGCGGCAGAAA
CGCGTTTTTTATCAGTTTGTCGACCCTGCTGGCTTCGTCCAAAAGAGTTT
TTTTCTTTCAAGTGTTGATCGAGGGTTACTCACGTGCATAGAGCGATAAG
GACTGGGATAAGAAACCCACGCCGGAGAGAAGAGCAAAGGAGGCAATGTA
TGCCAGTACATCCACCTTGGTCGGACGGGCCCCCTTACCTGCCGTCTTGG
TGTTTTGTCTGTCGTCCCCCCGCAGATCATCAATGACAACATGATGTACG
CCAAGGTGGTGGTGAGAATGGGGGTCCGGACGGAGTGCAAGAACTGCGAC
TTCAGCGACATCATGGAGGACGAGGAC GTGAGTTTAGAAGTATTTTGTTG
CTGTTGTTGTTGTTGTTGTTTTTGTCGTCTTCACGGAAAAAAAGTTCCGG
TGTCCGCTCCGTACCTTCTAATGTCCGTACCGGTTCAACTGGCGCGGACG
CCTTCCGTGGTCACAAGCCAACTACCCAACAAATTGAACCTTTTCTATCC
CTTGAAGGAGAAGATGGAAGGGGGGCGGGGTATCAGTGTGCTACGGTTCC
AATCGAGCTCGTTGTGCCGAGTAGTCTGTCTTGTCCATCCACGTGCATGA
TTTCGGTGACACGAGTCACGACTTTATCACGTGATCAGTCGAGCTATTGT
ATGCATGTGGTTATGGCCACACAGACGAATTTTTAAGGAAGCACATCAAA
TGTGTGACCACAACACACATCGACGTATTTTTTTCTACGGACGAACTCGT
TTGCTATTCGGACGAACGAGTTGAGTCTCTATGAGGCCCAGCTCCGTTTT
GGGATGGATGATGGGGTACGAAACGCGAATATTGAAAGAGCTTTTCGATG
TTTTGCGTTTTCCCGTCTTGTGCTGTCAGATGGTGAAGGACTTGAAGGAG
GCCGCGGAAGTTAGCATGGGTACGGAGATCACCATGATCGACATCGTCAG
CATCAAGTCGTTGGCGGATCAG GTGGGTTGGGCTCGACACTGCCGCTGCT
TGCCGGGAGGGATCAGCGGATAGACGATTGGCTATTCCAGGTTCCTCACT
TGCGCGTCTTCGCGTTTGTCAAGAAGGCGGCAACAATATTTACATTCACG
TAGATGTGTATTTTTGCTGGTGTTGGTATTTCCGTGAATCGTTTCGTAGG
TATGTCATCGCTCTCTTTGGTGACGTGTATTGTTGGGCGGGGTCTACTTG
GTTGTCGTCGCATGGTGTTCTGCATGACCGAGCGAGCTGCTTTAACCTTG
TGCACCTATAGCAGTAGGGGGTACAGGGGGCTCATCTTGTTGCGTACAGC
AGTGTCATGTCAAGAAGGCAGTGGGAGGGTGGCGCCCAATCACTGCCCTG
CATTTCTGCTCTACCGTCCGACGGCACTGGTGACGTAATAGTGACAATAA
TGACACACATTGATCCGAACGTGTCTATCTCATCAAAGACACGATGCCTC
AATAGTGCACACTGATCCAATCGTATCTGTTTATCAGAGACGCGAAAGAA
GACGTCAACCGAACGCGCCGCTTCATGCCCCCCGAAATTGCCGCTGCTCG
TCTCAACAAAAAATAAACAGGTGGTAGCGCTGTCGGAATACCGGTTGCAG
CTCTCGGAGTACCTCCGAAGCCGTATGCAGGCCATCGCGCCGAACCTGAC
CATCATGGTCGGCGAGCTTGTCGGAGCGAGGCTCATCGCGCACGCGGGGT
CGTTGATCAACCTCGCCAAGCAGCCCGCGTCCACGGTGCAGATCCTCGGG
GCCGAGAAGGCTCTCTTCCGCGCGCTCAAGACGAAG GTATGTGTACAGTA
CGTGTGTTTCGTTTGGCAGTGTTGACGTGTATGTGCTGTCACGTTGTTGG
CGTCGCGGTCAAGGCGAAGGTGTCGTTGGTTCTTCCCTCTTTTTTTTTTT
TCGCCAGAGCATGTTTAGGCCGTGATGTTCCTTTGGGTCGTGCCTGTCTG
CGTACCTTACGAACGTTCCCACCGGAATGACCAACTCAGCACTACCCGCA
CATGACCACGCACAGCAGTAGTATGCCTTCTCACCCGGAACTCGAACCCC
CTCCTGTCAACTCACCAAACGGCCCAGTATCCCTCTCCCGAACTTGAACG
CTCTTCCCCGTACTCTCCACACGGCGCAGTGTCCCTCATCCGAACTCGAA
CGCTCTTCCCTGAACTCATCACACAGACCTGTATGCCTCACGCCAACGCT
ACCCCCCCCCCCTCGGCTCGACTCTGCAGCACGACACGCCCAAGTACGGG
CTGATCTACCACGCTAGCTTGATCGGACAGGCGGCCCCCAAGAACAAGGG
GAAGATCTCGAGGGTGCTCGCGGCCAAGTGCGCGCTGGCCATCCGTGTGG
ACGCTCTCGCGGACGAGACGGACACGACCATCGGGATCGAGAGCCGTTCC
AAG GTTAGTTTGTTTACACTTGTTTTATGGTCTCCGGTTGTCTGCGATGT
ACAGCATCTGCCCAGCAGGCCCATTAGTGCAACATCTATTGTGTGTTTGT
GTGTGCCTCGCTGCTCTGCTGTGCTTAACCCGCCCTTGTTGGTTGCACCC
GTTTGGTTTATTGTTTTGTGTGTGTGGGTTAACAGGTGGAGATGCGACTC
CGGCAGCTTGAAGGAGGGGCGCGATTGTTGGAGGCGGCGCCGAAGACGCC
TACGCAG GTGACCACCAGCTTTCTTGGGGCAAGCGCGCTTTTCCTCCTCC
AAGAATGTTTTCGTTTTTTTTTTTTCATCATCGAATGCTATGTTTCCATA
ATTTGCGGGAGAATGAATGAAGGGGGCGATATGGAAGGACGGATAGCCGT
TGTCCATGGGGTTCGGTGACCGGTCACCATGAGAGAAAAAGTGTGAGGGA
GAGAGAGAATGAAAACAAGGTTCTCTCATCCAAGCATTGATGTCGAAACA
CCGATGCGAAGTTTCACGCTGAACAGAACAAAAGAAAACGGACAATCCCG
CAAGAGAAATAGTCCTGAGAGCGTGTATAGTAAGCACGAGACAGCCGTGT
GATGCCTTCTCGCACCTCGGATGCTTGGCATAAGAAAGCTCGTGGTGCGG
AGGGTCCCACTGGAAGTGATGATTCAGACAGACTGACCCTTTCTTTTTTT
TTGCGTTCCAGTGAAACCTCTATTTTTCGTTTATCCTGATGACGTTGTGT
TGACCGTTTCCCCTCACGAATGTGTTCTTTTTTGTTTGTTTCTTGTTCCA
AAGGTAAAGAAGTACGACTCGAAGGCGGCGGTGGCGGGAACACCCAAGAC
CTTCAGCACCGGGGAGGACATGGTGGAAGTCAAG GTGAGAGAGCTCCTGC
TACACTGCTGGTGCGAAAGTGTGACAACACCCGGTGTGGTAGGCGTGTCC
AAGAATCGAGGCGGGGGCTTAATGCCTGCTAAGAAGGGGCTGTTGACGTA
AGGGATTTTGTACCCCCGGAGCAATCGAAAGTTGTCGGAACTGCCCTGGC
GAACATTTTTTTATTTTTCTACGAAGTAGAAGTATGGGATAGCGAGGGGG
GTTTCGTATCCCTAATCCCGAACCCTACCGCGTACCCTACCGCGTACCCC
ATACTAAAATCAAGTTTAATATCCTGGCGAAGGCTGCTGAAAGTGTTGCG
ATAGGGTTGCGGAAAGGCGTTACGAACTGAGTTCCCGCTCATTTTTGGAT
AGGGCGGTGTTTTTCGACCGTCGCGTCTCTCGGAAGCCACTTGCTCGTTA
TTGTCCACCCCTGTGGCGAGGATTAAGCTTGCTTCTCATGGACCCCACTT
CCTCGTTCAGCTGCTGAACGTTCTTCTCCAACCCTGCAGAGGAGGTTTAG
TTTGAAAGCAACAAGTCTCTTATTTAGTTATACCCTATCTTGAGAGGATA
AATTGCGTTTCAATGATTTGTCAAGAGCGATACTCTTCTGGAACGCAACC
CACCACAGTTGCAGCGGGTGCCGCATTTACTGAAACCCTCCCCCTCTCTC
CTTCTGTTTTGACTCGGCAGGAGGAAGGTTCCGAGAAGAAGAAAAAGAAG
AAGGATAAGAGCGCGAAGAAGGCCAAGAAGGCGGCGGCGTCAGAGGACAC
CAACGGTAACGCCGCGTCGCCGACGGTAAAGGAGGAGGGGGACTTGGAAA
CGCCAAAGAAGAAGAAGAAGAAGCGGAAATCCGTGGGAGGCGATGTTGAC
GAGGCAGGGGACAGTGGCGAGGCATCAGCAGCAGCAGCGGCGCCATCCTC
GAAAAAGAAGAAAAAGAGGAAATCTGTCGGCGGGGACGTGGGCGCCGAGG
TGGACGGGGACGGGGGCGAGGGATCG GTGAGTTTTTTTTTTTCTTCTTGA
AGTCCATTTTGGACTCTCGAATGTGGTACGATTTAGGCGCATGTACCGGC
CGGAGTCATGCTCGCGCTGCCTTCCTCTTGTTTTGCCGCTGTGTTTCGTT
ATCATTGTAATGAAAGCGGGTCTAAGTAGGTTGGGATTGCAGTGATTGTG
GATCTAGATCGCGCGTTGGTGCTAAGAGAGGGGGGGGGCTCCATGAAGGC
CAAGATGTGCGTGGAATGTCAAGACGATGCCAAGAGTAGCAACAACACAG
ACAGCAGCCCTTACCCGTTTCGTTTTTGTCTTGAGCACGCAGTTGACCGC
ACCTCATCCCCCACGTTTCTGCCCTTTATGAACCAATGTTTGCGTGTTCA
GGAGAAGAAGAGGAAGAAGAAGAAGAAGAAGGAAGAGGCATAG ACAGAGA
GGGGTTGCATTTCAGCACATTTGCTTTGAACCCAGCTCCTTTCGATGTAC
CATAGGAAACACCTGAAGAACTGTGCATTATTCCTAGGAAGTGAGGTTGA
TAGGTTTAGCTTGTTGTGCTATCTTGGCACTGCGTGATTTTTCGGTGTTG
GTGATGATGCAGCAGCAGTGTTTCCGTAATGAATGATGCTTGATTGTCTG
GTACGTGTCCTGCTGTGCTTCACTAAACGTCTCCTCTGTTAGCTTACTGC
TCTGTGCTGCTGCTAAATGTAGCCATATTGTGCGGGGTCTACAGCCACAC
GGCGTGGTCGCGTTTTCCTGCCAAACGTCACTTCGGGGGGAGAAAATCAA
CAACATTTTTTTGTGCTCATGCGCGCTGCTGTACAGCCGACACGGCGCGC
TCTCTTGTTGCGGTTCTTCCAGCGTACGGTCTGGAGGCAACAATGCGGCG
TGGTCGCCTTTGTGTATCGGTTCGTTTTTGCGTTGATCCTTGATGGGTTG
GGTCTTCGCCAATGTGCAAGTATGTACCTGTTTTCTTCACCATGCTATTC
CGCTCGCTTGTTGGCGTTGCCAGCGTGGAGAACACGAACCGCAACAGGCG
AAACACGAGGCAGTTGGTGCGATTTGTACCGTTCCATTCTTGCAATGGGA
CCAGGGCTACATTTTTACCTCAGC back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig103:199128..209551-
>mRNA_Ecto-sp6_S_contig103.901.1 ID=mRNA_Ecto-sp6_S_contig103.901.1|Name=mRNA_Ecto-sp6_S_contig103.901.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1680bp|location=Sequence derived from alignment at Ecto-sp6_S_contig103:199128..209551- (Ectocarpus species6 EcLAC_371) back to top