prot_Ecto-sp6_S_contig103.879.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig103.879.1
Unique Nameprot_Ecto-sp6_S_contig103.879.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length230
Homology
BLAST of mRNA_Ecto-sp6_S_contig103.879.1 vs. uniprot
Match: D7FMR2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR2_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 1.510e-55
Identity = 107/118 (90.68%), Postives = 113/118 (95.76%), Query Frame = 0
Query:    1 MPGAAAGFTAPAAAPAFNASEDEVKGESGPGVGGGGNILVGNSVEAASSEASRDSGDGLVPMTEWPIAKRAVGGMERLLFALTMGPVALALSSVLWAISIPSLAGRIVRWMLCQAVAD 118
            MPGAAAGFTAPAAAPAF+ASEDEVKGESGPGVGGGGNILVGN+ +AASSEASRDSGDGLVPMTEWPIAKRAVGG+ERLLFALTMGPVALALSSVLWAISIPSLAGRIVRWML  ++  
Sbjct: 1708 MPGAAAGFTAPAAAPAFDASEDEVKGESGPGVGGGGNILVGNNAKAASSEASRDSGDGLVPMTEWPIAKRAVGGLERLLFALTMGPVALALSSVLWAISIPSLAGRIVRWMLVSSLTQ 1825          
BLAST of mRNA_Ecto-sp6_S_contig103.879.1 vs. uniprot
Match: D7FMR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR4_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 5.370e-55
Identity = 94/98 (95.92%), Postives = 95/98 (96.94%), Query Frame = 0
Query:  115 AVADRKPKLRSRRAGYFRKFCSGIVGPLGLVVGLSLALVLVVVSLLGSVLLWFRGLYEVFEWLTQPIEQDGSESDPCHVSLVGKGAILPGALRALEEG 212
            AVADRKPKLRSRRAGYFRK CSGIVGPLGLVVGLSLALVLVVVSLLGSVLLWFRGLYEVFEWLTQPIEQDGSESDPCHVSLVGKGAILPGALRA + G
Sbjct:   21 AVADRKPKLRSRRAGYFRKLCSGIVGPLGLVVGLSLALVLVVVSLLGSVLLWFRGLYEVFEWLTQPIEQDGSESDPCHVSLVGKGAILPGALRARKGG 118          
BLAST of mRNA_Ecto-sp6_S_contig103.879.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 4.870e-12
Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 0
Query:   73 GGMERLLFALTMGPVALALSSVLWAISIPSLAGRIVRWMLCQAVADRKP---------KLRSRRAGYFRKFCSGIVGPLGLVVGLSLALVLVVVSLLGSVLLWFRGLYEVFEWLTQPIEQDGSESDPCHVSLVGKGAILPGALRALEEG 212
            G ++RLLFA TMG VA+ L+++LW +S+P +A RIV W+L + V    P         +LR ++ G FR F    +G +  V  L  A+ L  V + GS +LW RG+  VFEW    + ++G       VS   K    P A+   E G
Sbjct: 1376 GMLQRLLFASTMGLVAVTLNALLWVLSLPWVAWRIVCWVLYKVVETGDPDEVETFLSVRLRDKK-GKFRAFLWVFLGIIACVFALGFAVALCGVCVAGSFVLWLRGVCNVFEWAHWRLSEEGR-----FVSGETKKGTCPTAMPGQERG 1518          
BLAST of mRNA_Ecto-sp6_S_contig103.879.1 vs. uniprot
Match: D7FNX2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX2_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 6.170e-8
Identity = 45/139 (32.37%), Postives = 71/139 (51.08%), Query Frame = 0
Query:   53 RDSGDGLVPMTEWPIAKRAVGGMERLLFALTMGPVALALSSVLWAISIPSLAGRIVRWMLCQAV------ADRKPKLRSRRAGYFRKFCSGIVGPLGLVVGLSLALVLVVVSLLGSVLLWFRGLYEVFEWLTQPIEQDG 185
            R  G+G VP+T         G ++RL F LTMG VA+AL+S+LW +S+P +A R+V W+  +         D +     +R G  R+    +       + L  A  L    ++GS  LWFRG++ V+EW+     ++G
Sbjct:  183 RQEGEGFVPITATYGWHTFDGTLQRLFFVLTMGLVAVALNSLLWVLSLPWVAWRLVCWVSYEFANEGDDDEDEETNAPVKR-GKLRESLLALGTIAACWLALLFAAALCGACIVGSFFLWFRGVWNVWEWVRWRRSEEG 320          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig103.879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FMR2_ECTSI1.510e-5590.68Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FMR4_ECTSI5.370e-5595.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JB40_9PHAE4.870e-1236.24Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FNX2_ECTSI6.170e-832.37Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 168..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..167
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..98
NoneNo IPR availableTMHMMTMhelixcoord: 78..100
NoneNo IPR availableTMHMMTMhelixcoord: 144..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig103contigEcto-sp6_S_contig103:16563..20668 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig103.879.1mRNA_Ecto-sp6_S_contig103.879.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig103 16550..21508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig103.879.1 ID=prot_Ecto-sp6_S_contig103.879.1|Name=mRNA_Ecto-sp6_S_contig103.879.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=230bp
MPGAAAGFTAPAAAPAFNASEDEVKGESGPGVGGGGNILVGNSVEAASSE
ASRDSGDGLVPMTEWPIAKRAVGGMERLLFALTMGPVALALSSVLWAISI
PSLAGRIVRWMLCQAVADRKPKLRSRRAGYFRKFCSGIVGPLGLVVGLSL
ALVLVVVSLLGSVLLWFRGLYEVFEWLTQPIEQDGSESDPCHVSLVGKGA
ILPGALRALEEGGIHVAGDRRREEPYRGR*
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