Homology
BLAST of mRNA_Ecto-sp6_S_contig102.877.1 vs. uniprot
Match:
A0A6H5KUS4_9PHAE (HIT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS4_9PHAE)
HSP 1 Score: 375 bits (963), Expect = 4.020e-128
Identity = 175/188 (93.09%), Postives = 182/188 (96.81%), Query Frame = 1
Query: 4 SRIESEYSFGSKPFGHYKGTPRVPIENVKGFRVGRDGWKEVFHLFFKNCDHPALQDQIYFQDERFMVIYDVYPKARHHLLLMPRPSFLDVMRPSDLRREHLSALRQMHALGRAVAEHLSQQGIGEIRIGVHAVPSMEPLHMHIISQDFDSERLRMPRHWNIFTTEIFLEPAWVEEMLERHGCLQLDLE 567
S IESEYS GS+PFGHYK TP VPIEN+KGFRVGRDGWKEVFHLFFKNCDHPALQDQIYFQDERFMVIYD YPKARHHLLLMPRPSFLDV+RPSDLRREHLSALRQMHALGRAVAE LSQQGIGEIRIGVHAVPSMEPLHMHIISQDFDSER+RMPRHWNIFTT+IFLEPAW+EEMLERHGCLQLD+E
Sbjct: 3 SGIESEYSIGSQPFGHYKETPPVPIENIKGFRVGRDGWKEVFHLFFKNCDHPALQDQIYFQDERFMVIYDGYPKARHHLLLMPRPSFLDVIRPSDLRREHLSALRQMHALGRAVAEGLSQQGIGEIRIGVHAVPSMEPLHMHIISQDFDSERMRMPRHWNIFTTDIFLEPAWIEEMLERHGCLQLDME 190
BLAST of mRNA_Ecto-sp6_S_contig102.877.1 vs. uniprot
Match:
D7G953_ECTSI (Aprataxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G953_ECTSI)
HSP 1 Score: 342 bits (877), Expect = 2.710e-115
Identity = 161/165 (97.58%), Postives = 162/165 (98.18%), Query Frame = 1
Query: 1 MSRIESEYSFGSKPFGHYKGTPRVPIENVKGFRVGRDGWKEVFHLFFKNCDHPALQDQIYFQDERFMVIYDVYPKARHHLLLMPRPSFLDVMRPSDLRREHLSALRQMHALGRAVAEHLSQQGIGEIRIGVHAVPSMEPLHMHIISQDFDSERLRMPRHWNIFTT 495
MSRIESEYSFGSKPFGHYKGTPRVPIENVKGFR+GRDGWKEVFHLFFKNCDHPALQDQIYFQDERFMVIYD YPKARHHLLLMPRPSFLDVMRPSDLRREHLSAL QMHALGRAVAE LSQQGIGEIRIGVHAVPSMEPLHMHIISQDFDSERLRMPRHWNIFTT
Sbjct: 1 MSRIESEYSFGSKPFGHYKGTPRVPIENVKGFRIGRDGWKEVFHLFFKNCDHPALQDQIYFQDERFMVIYDGYPKARHHLLLMPRPSFLDVMRPSDLRREHLSALHQMHALGRAVAEDLSQQGIGEIRIGVHAVPSMEPLHMHIISQDFDSERLRMPRHWNIFTT 165
BLAST of mRNA_Ecto-sp6_S_contig102.877.1 vs. uniprot
Match:
D8LEA7_ECTSI (FHA-HIT protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA7_ECTSI)
HSP 1 Score: 200 bits (508), Expect = 7.360e-56
Identity = 105/206 (50.97%), Postives = 135/206 (65.53%), Query Frame = 1
Query: 52 YKGTPRVPIENVKGFRVGRDGWKEVFHLFFKNCDHPA-LQDQIYFQDERFMVIYDVYPKARHHLLLMPRPSFLDVMRPSDLRR-EHLSALRQMHALGRAVAEHLSQQGIGEIRIGVHAVPSMEPLHMHIISQDFDSERLRMPRHWNIFTTEIFLEPAWVEEMLERHGCLQLDLESRYIRLREQTP-RCHICHETIGGVERLKAHYL 660
Y+ TP P++ G WK V + K+ P LQ ++YF D + +V+YD YPK+R+HLLL+P+P FLDV + S+LRR EHLS+LRQ+HA AVAE LSQQG G IR G H +PS+EPLH+HIISQDFDSERL +HWN FTT+ FL+ +WVE L G L LD E ++ E TP RC CH + + +LK H L
Sbjct: 268 YRRTPPTPVK-------GAGHWKAVLFQYLKDEPMPVELQREVYFSDNQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELRRDEHLSSLRQLHATATAVAEALSQQGAGVIRCGYHGIPSLEPLHLHIISQDFDSERLTKRKHWNSFTTDFFLDASWVEARLLERGSLGLDKER--LKALEATPLRCFRCHSPMTNMTKLKEHLL 464
BLAST of mRNA_Ecto-sp6_S_contig102.877.1 vs. uniprot
Match:
A0A6H5KT50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT50_9PHAE)
HSP 1 Score: 181 bits (460), Expect = 2.820e-49
Identity = 97/131 (74.05%), Postives = 104/131 (79.39%), Query Frame = 1
Query: 562 LESRYIRLREQTPRCHICHETIGGVERLKAHYLSHEAIARVYGPSRQRNARQVGRRSIPEPPRHEQRHLERVDPRSQQGSWRRGHSAPQTRVRGAQYQGTRSNEFPQGKPVSYLGARPSRSIQGRASAVWN 954
+ +RYIRL+EQTPRCHIC ETIGGVERLKAHYLSHE IARVYGPSRQRNA QV RSIPE P HEQRHL R DPRSQQGSWRRGH APQTRV GAQYQ TR+NEFPQG + RP + QG S+ N
Sbjct: 1 MPNRYIRLKEQTPRCHICQETIGGVERLKAHYLSHETIARVYGPSRQRNASQVDHRSIPESPLHEQRHLGRADPRSQQGSWRRGHCAPQTRVEGAQYQSTRNNEFPQGPGRAN---RPRWAGQGGCSSTRN 128
BLAST of mRNA_Ecto-sp6_S_contig102.877.1 vs. uniprot
Match:
A0A6H5K612_9PHAE (HIT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K612_9PHAE)
HSP 1 Score: 166 bits (420), Expect = 3.830e-43
Identity = 83/153 (54.25%), Postives = 108/153 (70.59%), Query Frame = 1
Query: 52 YKGTPRVPIENVKGFRVGRDGWKEVFHLFFKNCDHP-ALQDQIYFQDERFMVIYDVYPKARHHLLLMPRPSFLDVMRPSDLRR-EHLSALRQMHALGRAVAEHLSQQGIGEIRIGVHAVPSMEPLHMHIISQDFDSERLRMPRHWNIFTTEIF 504
Y+ TP VP++ G WK V + K+ P LQ +++F +++ +V+YD YPK+R+HLLL+P+P FLDV + S+LRR EHLS+LRQ+HA AVAE LSQQG G IR G H +PS+EPLH+HIISQDFDSERL +HWN FTT F
Sbjct: 257 YRQTPPVPVK-------GAGHWKAVLFQYLKDRPMPDELQREVFFSNDQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELRRDEHLSSLRQLHATAAAVAEALSQQGAGVIRCGYHGIPSLEPLHLHIISQDFDSERLTKRKHWNSFTTGTF 402
BLAST of mRNA_Ecto-sp6_S_contig102.877.1 vs. uniprot
Match:
D7G951_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G951_ECTSI)
HSP 1 Score: 150 bits (379), Expect = 5.330e-39
Identity = 80/190 (42.11%), Postives = 110/190 (57.89%), Query Frame = 1
Query: 118 KEVFHLFFKNCDHPALQDQIYFQDERFMVIYDVYPKARHHLLLMPRPSFLDVMRPSDLRREHLSALRQMHALGRAVAEHLSQQG---------IGEIRIGVHAVPSMEPLHMHIISQDFDSERLRMPRHWNIFTTEIFLEPAWVEEMLERHGCLQLDLESRYIRLREQTPRCHIC--HETIGGVERLKAH 654
K LF + +Q ++++ DE MV YD +PK + HLL++PR +FL+V PS LR+EHL LR++HA+G A+A+ LS Q IR G HA+PS EPLH+H++S D D L+ HWN FTT++FLE +WVE LE G L LD+ + + L RC C +E LKAH
Sbjct: 73 KTALFLFLMYHTNEQIQGEVFYMDEDVMVTYDGFPKGKFHLLVVPRETFLNVTGPSALRKEHLPKLRRLHAMGTALAKALSLQAEVRELSHPSANVIRCGYHAMPSQEPLHLHVVSMDLDGTGLKRKTHWNSFTTDLFLEASWVERRLEERGSLGLDMRN-FRELEHVKLRCFRCPGEPEFRHMESLKAH 261
BLAST of mRNA_Ecto-sp6_S_contig102.877.1 vs. uniprot
Match:
A0A0G4IM90_PLABS (HIT domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IM90_PLABS)
HSP 1 Score: 135 bits (339), Expect = 4.620e-34
Identity = 74/185 (40.00%), Postives = 107/185 (57.84%), Query Frame = 1
Query: 115 WKEVFHLFFKNCDHPALQDQIYFQDERFMVIYDVYPKARHHLLLMPRPSFLDVMRPSDLRREHLSALRQMHALGRAVAEHLSQQGIGE--IRIGVHAVPSMEPLHMHIISQDFDSERLRMPRHWNIFTTEIFLEPAWVEEMLERHGCLQLDLESRYIRLREQTPRCHICHETIGGVERLKAHYLS 663
WK V N ++ D+ + IYD YPKAR HLL++PR + + S LRREHL +R M G+ AE LS G+ ++G HAVPS++ LHMH+IS D DSE L+ +HWN FTTE FL P +V +E HG +Q+D +RY + ++ CH C +++ + LK+H ++
Sbjct: 24 WKGVLSALVNNA--ARFPFVVFADDDDTVTIYDRYPKARVHLLVLPRANISSI---SVLRREHLGLVRAMINSGKRAAELLSNAGMFPEGYKMGFHAVPSLDRLHMHLISCDMDSEALKNKKHWNSFTTEFFLPPEFVVSQIEEHGSVQID-RNRYEEVLKRPLACHKCRQSLKTIPALKSHIVN 202
BLAST of mRNA_Ecto-sp6_S_contig102.877.1 vs. uniprot
Match:
A0A1Y2ANP7_9FUNG (HIT-like protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2ANP7_9FUNG)
HSP 1 Score: 135 bits (340), Expect = 3.650e-33
Identity = 71/197 (36.04%), Postives = 117/197 (59.39%), Query Frame = 1
Query: 79 ENVKGFRVGRDGWKEVFHLFFKNCDHPALQDQIYFQDERFMVIYDVYPKARHHLLLMPRPSFLDVMRPSDLRREHLSALRQMHALGRAVAEHLSQQ-GIGEIRIGVHAVPSMEPLHMHIISQDFDSERLRMPRHWNIFTTEIFLEPAWVEEMLERHGCLQLDLESRYIRLREQTPRCHICHETIGGVERLKAHYLSH 666
+N K + W + L+ ++ +H +D IY ++FMVIYD YPKA++HLL++P+ + L + HL ++ M L + V L+++ G E +IG HA+PSM +HMH+IS+DF S L+ +HWN FT+E FL+P+++ E L +GC++LD + Y + +Q +C C + + + LKAH +H
Sbjct: 114 DNSKEKASVKTSWSDGLLLYIRHPEH--FKDSIYKIYDKFMVIYDKYPKAKYHLLIIPKEEIKSIY---YLNKSHLPLIKDMIELSKEVINDLNKKNGEIEFQIGFHAIPSMNQVHMHVISRDFISPFLKTKKHWNTFTSEFFLKPSFIIEQLNNNGCIKLDRQY-YENILKQPLKCCKCGQDLKNMPTLKAHLTTH 304
BLAST of mRNA_Ecto-sp6_S_contig102.877.1 vs. uniprot
Match:
A0A210QY14_MIZYE (Aprataxin n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QY14_MIZYE)
HSP 1 Score: 128 bits (322), Expect = 1.230e-31
Identity = 68/174 (39.08%), Postives = 105/174 (60.34%), Query Frame = 1
Query: 145 NCDHPALQDQIYFQDERFMVIYDVYPKARHHLLLMPRPSFLDVMRPSDLRREHLSALRQMHALGRAVAEHLSQQGIGEIRIGVHAVPSMEPLHMHIISQDFDSERLRMPRHWNIFTTEIFLEPAWVEEMLERHGCLQLDLESRYIRLREQTPRCHICHETIGGVERLKAHYLSH 666
+ D P LQ+ + DE+ ++I D YPKA+HH L+MP+ + ++ + L+ EHL L +H G V H + + + + R+G HAVPSM LH+H+ISQDFDS L+ +HWN FTTE F + + +ML+ G +QLD S++ + ++ RCH+C + + LK H H
Sbjct: 37 SMDDPELQEYV---DEKVVIIKDKYPKAKHHFLVMPKENIPNL---NSLKPEHLELLEYLHEKGEEVI-HRTDETL-KFRLGYHAVPSMSHLHLHVISQDFDSPCLKNKKHWNSFTTEYFFDSEDIMKMLKEKGKVQLD-SSKFQDVLKRNLRCHVCRKDFSTMPALKTHIKVH 201
BLAST of mRNA_Ecto-sp6_S_contig102.877.1 vs. uniprot
Match:
UPI00087828AC (aprataxin isoform X1 n=4 Tax=Scleropages formosus TaxID=113540 RepID=UPI00087828AC)
HSP 1 Score: 132 bits (331), Expect = 3.180e-31
Identity = 73/172 (42.44%), Postives = 101/172 (58.72%), Query Frame = 1
Query: 160 ALQD---QIYFQDERFMVIYDVYPKARHHLLLMPRPSFLDVMRPSDLRREHLSALRQMHALGRAVAEHLSQQGIGEIRIGVHAVPSMEPLHMHIISQDFDSERLRMPRHWNIFTTEIFLEPAWVEEMLERHGCLQLDLESRYIRLREQTPRCHICHETIGGVERLKAHYLSH 666
++QD Q+Y +D+ +VI D YPKARHH L++P S + LR EH S LR MH + + E R+G HA+PSM +H+H+ISQDFDS L+ +HWN FTTE FLE V EMLE+ G Q+ ++ L + RCH+CH+ + + +LK H SH
Sbjct: 211 SMQDPKMQVY-KDDMVVVIKDKYPKARHHWLVLPWESIASL---KALRAEHCSLLRHMHHVAERMVEQCPDASKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTEYFLESQAVIEMLEKDG--QVTVKDGASELLKFPLRCHVCHKELSTIPQLKEHLRSH 376
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.877.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 4.02e-128 / Id = 93.09 Expect = 2.71e-115 / Id = 97.58 Expect = 7.36e-56 / Id = 50.97 Expect = 2.82e-49 / Id = 74.05 Expect = 3.83e-43 / Id = 54.25 Expect = 5.33e-39 / Id = 42.11 Expect = 4.62e-34 / Id = 40.00 Expect = 3.65e-33 / Id = 36.04 Expect = 1.23e-31 / Id = 39.08 Expect = 3.18e-31 / Id = 42.44 Sequence A0A6H5KUS4_9PHAE D7G953_ECTSI D8LEA7_ECTSI A0A6H5KT50_9PHAE A0A6H5K612_9PHAE D7G951_ECTSI A0A0G4IM90_PLABS A0A1Y2ANP7_9FUNG A0A210QY14_MIZYE UPI00087828AC
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Stop 0
Start 1
Seed ortholog score 342.4
Seed ortholog evalue 2.7e-91
Seed eggNOG ortholog 2880.D7G953
Preferred name HNT3
Model size 1180
KEGG ko ko:K10863
Hectar predicted targeting category other localisation
GOs GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003697,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006163,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008270,GO:0008409,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016819,GO:0016895,GO:0017076,GO:0019001,GO:0019002,GO:0019637,GO:0019693,GO:0030983,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033554,GO:0033699,GO:0034641,GO:0035312,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0047627,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0120108,GO:0140097,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1905108,GO:1990165
Exons 8
EggNOG free text desc. DNA 5'-adenosine monophosphate hydrolase activity
EggNOG OGs KOG0562@1,KOG0562@2759
EC 3.1.11.7,3.1.11.8,3.1.12.2
Cds size 1179
COG Functional cat. O
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko01000,ko03400
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348739.4904137-CDS-Ecto-sp6_S_contig102:632743..633183 1682348739.4904137-CDS-Ecto-sp6_S_contig102:632743..633183 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 632744..633183 -
1682348739.5038857-CDS-Ecto-sp6_S_contig102:633571..633638 1682348739.5038857-CDS-Ecto-sp6_S_contig102:633571..633638 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 633572..633638 -
1682348739.5117764-CDS-Ecto-sp6_S_contig102:634065..634168 1682348739.5117764-CDS-Ecto-sp6_S_contig102:634065..634168 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 634066..634168 -
1682348739.5190732-CDS-Ecto-sp6_S_contig102:634590..634663 1682348739.5190732-CDS-Ecto-sp6_S_contig102:634590..634663 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 634591..634663 -
1682348739.5267067-CDS-Ecto-sp6_S_contig102:635790..635903 1682348739.5267067-CDS-Ecto-sp6_S_contig102:635790..635903 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 635791..635903 -
1682348739.5343692-CDS-Ecto-sp6_S_contig102:636112..636234 1682348739.5343692-CDS-Ecto-sp6_S_contig102:636112..636234 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 636113..636234 -
1682348739.5420263-CDS-Ecto-sp6_S_contig102:636425..636518 1682348739.5420263-CDS-Ecto-sp6_S_contig102:636425..636518 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 636426..636518 -
1682348739.54989-CDS-Ecto-sp6_S_contig102:637432..637600 1682348739.54989-CDS-Ecto-sp6_S_contig102:637432..637600 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig102 637433..637600 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig102.877.1
>prot_Ecto-sp6_S_contig102.877.1 ID=prot_Ecto-sp6_S_contig102.877.1|Name=mRNA_Ecto-sp6_S_contig102.877.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=393bp
MSRIESEYSFGSKPFGHYKGTPRVPIENVKGFRVGRDGWKEVFHLFFKNC DHPALQDQIYFQDERFMVIYDVYPKARHHLLLMPRPSFLDVMRPSDLRRE HLSALRQMHALGRAVAEHLSQQGIGEIRIGVHAVPSMEPLHMHIISQDFD SERLRMPRHWNIFTTEIFLEPAWVEEMLERHGCLQLDLESRYIRLREQTP RCHICHETIGGVERLKAHYLSHEAIARVYGPSRQRNARQVGRRSIPEPPR HEQRHLERVDPRSQQGSWRRGHSAPQTRVRGAQYQGTRSNEFPQGKPVSY LGARPSRSIQGRASAVWNERLVIVAMRRGQASREFRVRTSQPTKQFHRYA LKRRVYPTTIPVVTPPASDGSVRTFEGPEQRSERVWCEENSKH back to top mRNA from alignment at Ecto-sp6_S_contig102:632744..637600-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig102.877.1 ID=mRNA_Ecto-sp6_S_contig102.877.1|Name=mRNA_Ecto-sp6_S_contig102.877.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4857bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:632744..637600- (Ectocarpus species6 EcLAC_371)ATGTCAAGGATCGAGTCCGAATACTCGTTTGGCAGCAAGCCGTTCGGGCA
CTACAAGGGGACGCCGCGTGTACCAATCGAAAATGTGAAGGGATTCCGCG
TTGGGCGGGATGGCTGGAAGGAGGTGTTTCACCTGTTCTTCAAAAATTGT
GACCATCCGGCATTGCAG GTGAAGTCAGCGTCAAACCATCCGCGCCGTCC
ACTCAGTCAACCTACACTCCCGAGATTTGTGTCTGATCGACTCAAGGTAT
ACGACAGGCGGCCGCCTGGTCACATGGCTGCTAGAATTGCAAACTTTAAG
TATTCGCCGAACCTTCCTCTCGACTGCTCCACGAAGACGGAGTAAACAAC
CAATATCTGGTACATGCGCTGACCCCAATCTGTAATATGCGATGGAAAAC
GGGACTGACGGCGTTGTCTCAATCAAGTGGATCATGACGCGCATTGACCC
AAGAGCTCACGTATTCACACTCCGGAGTATGGTTGTATCACCATGGAGTA
TTGGTTGTACCTCCATCTCCTCAGCTCACATGCAGCCCTACAGGTGAAAT
TCCTTCGATATTGGAACTGCCGCACCTCCCACACGCAGATGGAATACTGA
GCGGGATGATTGAAAAAGTTGTGTCTTCACGTGCTGGTGCAGCATCGGAG
CTCCACCTGTTTAATTTTGTCTCGCACGGTATATAGTACAACGTTGAGAT
GTTTACCAGTTTGTTGCGAAGCATGCCCATGTACAGTAGTCAAATTTCAT
CGTAGTCTATACGTGACGAAAACGTTTGGGCAAAACAATCCGCAAGACAT
TTTGATTACCTGGGAATACTTCTTCAACATTGTTAAGCCCTAGCAGACTG
TGCAGACATTCAAAGTAACTTGTTGTTGCAGGATAGGGAAAAGAGCTGAA
CATGTTCTCAGTTGCCCTGGTGTTTTGGAGTTAGGGTTTGGTGTCTTCAC
ACAATATTGTTTTCAATGCTACCTTGTCCAATGTCGGTACTGGTGCAAAG
ACGCGGACGGCTTCCGTGTGGGCAAGATTGTCTAGATACGCAAATTTTTC
CTGCGTCATCGATCTTGATTTCGTCACTGCAGGACCAGATCTACTTCCAA
GACGAGAGGTTCATGGTAATTTACGACGTATACCCCAAAGCACGGCACCA
TCTACTTTTGATGCCGAGGCCGTCG GTGAGTTGACATGTGCGCACGGTCA
AAATGTTCCTTGTATATGACGGTCATTCGAGAGGCCTATGCGCAGGGAGT
GAAAGCCGTCAAAGTCTGGAGCTGATGGATAGCCAATACTGCGAGGTTAG
CATGCCGCTGATCTCCTCTTCGTTCTTACTCTCGCGGCTACAATTTGGCT
GAACCCTCTCAACCAGTTTCTCGATGTCATGCGGCCATCGGACCTCCGAC
GCGAACACCTCTCAGCTCTACGCCAGATGCATGCATTGGGTAGGGCAGTG
GCGGAACACTTGTCGCAGCAGGGCATCGGCGAAATCAG GTGAACTGGGGC
GGAAGACAACTGTCGGATATCATTGCAAACGTGCCCGAGGTGTAGCGGTA
TGTTGGAAAAAAACGGAAAACAGGCAGGAGTCGTATCGGGTGTGCGGGGT
ACGTCGGGGGTTATTTACAAGAGCTTTTATTGCACCATGACCCTCACCTG
TATTCACTGTCACGATCCACTCACTCTGTCTGTTTGCGGCCTGCAAGGAT
CGGCGTGCACGCTGTTCCTTCAATGGAGCCGTTGCACATGCACATCATCA
GCCAAGACTTCGACAGCGAAAGACTGCGAATGCCGCGTCATTGGAACATC
TTCACCACAG GTAGCCGCCTTCTGCATTGCCGACCGTGTGCTTGAAACGG
GTGCGCTCGATAGTTATCTGTAGGTGCATGAGGGTGCAAAAGACGGCGGG
GATCGCCAGGTAAACACGCAGGACACGGGAGCGGGAGAAGGGCTGCGGCT
TCCCTATTTGCCCTAGAGAGTGGATTATTCGGTTGAGATAGCGTACGCTT
ATCACGTTTGATGTACCTCGCGAATGCTGCAGCGTGCGGGCGATAGAGAA
TTCACTACGTGCGTCATTTGTGGATCTCTAGCCTCGTGTGACTCTTCTTG
CTAAAATGAGTACTGTAAGACATGTGGCATTTAAAGAGCTTCAAAACGCA
TCCCCACCACTGCACACCGGCACGGCGCAGTAGTCGAGTTATCGTCGTCG
TTGAACACTATCTGACCGAGCCTCTTCCTTGCTTTCACAGGTAAACAGTT
TGACTCGTTCGTGAGTTCATGACCCTTACCAGTGTTGCGCTGTGGGCCGT
TCGGTGGCGCATAATACAATAAATACCGATTCCATCGGAACTGCGCAGCG
CAGTTTCGGTCGATCCAACTGTCGTTTCTCTTCGCGAGAATGCAGCCTTG
GCGGGTATTCCTTCGTGCTGTTCGTGCACCCTGACAGAATACTCGCCATC
ATCATTAGCTCCCTTGTAGCCTCAGACCCTTTCTCAATGTCCGCTCTTGC
CGCCGCCGACCCAATGGAAACATCTGGAAGCAGATGCCGTTCGTTGCGGT
GTTCTCGTGAAAATAGTTTTATCGCCTTGACGACGTCATCAATATCGACG
TTACATGTCACACGTTGAAATCTCAGCTGTGGTCTACTTCGTACAAAACA
AGTGACCTATGCCCGTCAAAGCAACACGACCGTCAACAAATTCACAAATC
GTCGGGCGCGACGACCGTGAGTTCAGACGCCAATAAAACCGTTTGTAGCC
CAAACAGAGGGGTTGGGGTTAGACGTTGTTTCTTGCACACCTAGTTCCAC
ACAACGTTGAAGGTGGATCGTGCTTTTAATGTGTTTTTCAATATTTACCC
TGCCTGGTGACCCTGCTGTGGGTATGCGAAATGAATCGAACACCCGGTTG
TTGTGTTGTAATCCATGCGGCCGTGAAAACTATTCAGAAATCTTCCTCGA
ACCTGCTTGGGTAGAGGAAATGCTTGAGCGGCACGGATGCCTCCAGCTGG
ATTTGGAAAG GTGAACATTCGTATTCCATGTGCACAACGCACTACAGCCC
CTGCGAGTCCAAAAGTAGCTGTGCACGTGGTACCCCGTATTACTGTAGGC
ACACCCCGCTTGACGTTTTTCATCTAATGCGGGGTCATTATTCTTGAGAG
CTGCGCGATGTTCCAACAAGATCCTCTGTCCGCTGCGGGAAATGCAACCG
ACAAAGGCAGACCGAACAAAATTCGGGGGGGAGACCCGATGCGCAGAATG
CGTTGAATAGAGCGAGACAGTTCGAGTATTGTCGATTTCATGTAATACGA
GGGTTGATGAGAGAAAGTGATCTGTCGTATCGGCTTGGTCCTAGTGGTAG
TATGCACCAATCGTGAACTACAATCGTGAACTATGCACTGGCGACTTCTG
CGAGGTGTGTCTGACCTTCCATCCATGCCTAGCAGGTACATTCGGCTGAG
GGAACAAACTCCGCGGTGCCATATTTGCCACGAAACAATTGGCGGGGTTG
AGCGACTCAAGGCCCACTATCTTTCCCACGAGGCG GTAAGCAGTTGCACA
TATAGAACATGTCCCTCGTACATTGAACGAGAGCAGCTAGGCTCTCCCGT
GGTCACGGCTACTCAAAGCATCCGCCATTCCCGGGCCAAAGAATGTGTTC
CATTCATGCCGCAGTCGTCAGCTGAGCGACAAAACTCACGGCATAGACAG
CACACATCGATTCTGCTGTCAACTGCCAGTCATCGCTCCTCTTCCGGAAC
TGGGTCATGAAAGTATCACGAAGGGACTGTCGAAGCGCTGGCTCACCTGC
CTGGTTCTCCAGAGTCGCATTAACGCATGGATTGCCCGACTCCGGGTGCA
CGCACAGACGCAACACGCTGACCGTGAGACGTTGAAGGCCCACAATTTCC
TTCGACAGAAACGATCGGACTTTGACACTGCGCGTCCCGCCATCACTTTG
GATGCAAACCAGATCGCACGCGTGTACGGCCCTTCTCGGCAGCGCAATGC
CAGGCAGGTTGGTCGTCGCTCTATCCCAG GTAAATTGGCCGAGTCATTCG
TACCGTTCCCATGCTGGCCAATCCGTTGTTCTGCAAGCCTGGCTATTATT
TTCTTGTTCCGTTTTTCCTTCTCGTCCCTTTCTCGTCGCCATTGAAGAAC
GTATTGTTGGTGTCGGGCCCTAGCCCCGTACCAAACATCTCCTTGCTGGC
GTTTGTACGCATACCTATTGGTGTGCGCCAGTACTTTGGGAACAACAGCA
GGTTATCGCTTGGACGACCCCCTGGAGAAGGCGTTGAGGGAAACCAAAAC
TGTCGATAGGACCAATAACGTACCGCGCGCATCCCGACAGCGCTTTTGCA
TTTGCCAGGAGGATCGACTCTCAACGACCCACTGATGTGTTTCGCGGGCA
CGATTTACGCAATACAGAACCCCCCCGCCATGAACAACGCCATCTCGAGC
GCGTGGACCCGAGAAGCCAACAAGGATCATGGAGGCGGGGTCATTCCGCG
CCGCAAACCCGGGTTAGAGGCGCGCAGTATCAGGGCACACGCAGCAATGA
GTTTCCTCAAGGTAAGCCAGTGTCGTACCTCGGCGCGCGCCCAAGCCGGA
GTATTCAAGGACGAGCATCGGCGGTCTGGAACGAAAGACTCGTGATAGTG
GCAATGAGAAGAGGGCAGGCCTCGAGGGAATTTCGGGTGCGCACCTCACA
ACCAACGAAACAGTTCCATAGGTATGCGCTAAAGCGACGGGTATACCCTA
CTACTATACCTGTCGTTACGCCGCCCGCGTCAGACGGATCGGTACGAACA
TTCGAAGGTCCCGAGCAGAGGTCGGAACGGGTCTGGTGTGAAGAAAACAG
CAAGCAC back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig102:632744..637600-
>mRNA_Ecto-sp6_S_contig102.877.1 ID=mRNA_Ecto-sp6_S_contig102.877.1|Name=mRNA_Ecto-sp6_S_contig102.877.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1179bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:632744..637600- (Ectocarpus species6 EcLAC_371) ATGTCAAGGATCGAGTCCGAATACTCGTTTGGCAGCAAGCCGTTCGGGCA CTACAAGGGGACGCCGCGTGTACCAATCGAAAATGTGAAGGGATTCCGCG TTGGGCGGGATGGCTGGAAGGAGGTGTTTCACCTGTTCTTCAAAAATTGT GACCATCCGGCATTGCAGGACCAGATCTACTTCCAAGACGAGAGGTTCAT GGTAATTTACGACGTATACCCCAAAGCACGGCACCATCTACTTTTGATGC CGAGGCCGTCGTTTCTCGATGTCATGCGGCCATCGGACCTCCGACGCGAA CACCTCTCAGCTCTACGCCAGATGCATGCATTGGGTAGGGCAGTGGCGGA ACACTTGTCGCAGCAGGGCATCGGCGAAATCAGGATCGGCGTGCACGCTG TTCCTTCAATGGAGCCGTTGCACATGCACATCATCAGCCAAGACTTCGAC AGCGAAAGACTGCGAATGCCGCGTCATTGGAACATCTTCACCACAGAAAT CTTCCTCGAACCTGCTTGGGTAGAGGAAATGCTTGAGCGGCACGGATGCC TCCAGCTGGATTTGGAAAGCAGGTACATTCGGCTGAGGGAACAAACTCCG CGGTGCCATATTTGCCACGAAACAATTGGCGGGGTTGAGCGACTCAAGGC CCACTATCTTTCCCACGAGGCGATCGCACGCGTGTACGGCCCTTCTCGGC AGCGCAATGCCAGGCAGGTTGGTCGTCGCTCTATCCCAGAACCCCCCCGC CATGAACAACGCCATCTCGAGCGCGTGGACCCGAGAAGCCAACAAGGATC ATGGAGGCGGGGTCATTCCGCGCCGCAAACCCGGGTTAGAGGCGCGCAGT ATCAGGGCACACGCAGCAATGAGTTTCCTCAAGGTAAGCCAGTGTCGTAC CTCGGCGCGCGCCCAAGCCGGAGTATTCAAGGACGAGCATCGGCGGTCTG GAACGAAAGACTCGTGATAGTGGCAATGAGAAGAGGGCAGGCCTCGAGGG AATTTCGGGTGCGCACCTCACAACCAACGAAACAGTTCCATAGGTATGCG CTAAAGCGACGGGTATACCCTACTACTATACCTGTCGTTACGCCGCCCGC GTCAGACGGATCGGTACGAACATTCGAAGGTCCCGAGCAGAGGTCGGAAC GGGTCTGGTGTGAAGAAAACAGCAAGCAC back to top