mRNA_Ecto-sp6_S_contig102.874.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: D7G975_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G975_ECTSI) HSP 1 Score: 1157 bits (2992), Expect = 0.000e+0 Identity = 549/573 (95.81%), Postives = 555/573 (96.86%), Query Frame = 1 Query: 1 VSWPDCH*SRAHHFVDKRLLLAVNKSKRCVRFAFRPDAGLRMCVGI*ASFHRYWRVRHECPIARVPTRPGHERYQQAAYIDADFLLLSSGGIGGHTDGNIYGHACAKNCVAVAAINWQEGDGPAGSFEDPETSRVEHFSSTGPCIVDPGSGKETREKPTTCAADGAATSTIGFSEFLGTSAAAPVAAAIATIVRAACFPRVVEYGEIMEMLTNYEYTIDYTNDADGAAETWGNEAGHGIISASQMLAWVEENCSEACS-ASGSTPAPTPTIAQPGSLGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGNECWCQDTDIDLRHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSSSMTSEACADYCANESPRNKYYATQYGAQCWCAEEVDLRHGEGRCAYACTGDAKTTCGGFEAFDLFEVIPLSPPTEDYYVGCFADDLADRVLEDMISAVDMTLEACENHCTERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQCGGSVAFSLYERDTC 1716
VSWPDCH SR H FVD+RLLLA NKSKRCVRFA PDAGLRMCVGI ASFHRYWRVRHEC IARVPTRPGHERYQQAAYIDADFLLLSSGGIGGHTDGNIYGHACAKNCVAVAAINWQEGDGP GSFEDPETSRVE+FSSTGPCIVDPGSGKETREKPTTCAADG ATST GFSEFLGTSA+APVAAAIATIVRAACFPRVVEYGE+MEMLTNYEYT+DYTNDADGAAETWGNEAGHGIISA+QMLAWVEENCSEACS ASGSTPAPTPT AQPGSLGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYG ECWCQDTDIDLRHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSSSMTSEACADYCANESPRN YYATQYGAQCWCAEEVDLRHGEGRCAYACTGDAKTTCGGFEAFDLFEV PLSPPTEDYYVGCFADDL DRVLEDMISAVDMTLEACENHCTERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQCGG VAFSLYERDTC
Sbjct: 6 VSWPDCHCSRVH-FVDERLLLAGNKSKRCVRFALCPDAGLRMCVGIWASFHRYWRVRHECSIARVPTRPGHERYQQAAYIDADFLLLSSGGIGGHTDGNIYGHACAKNCVAVAAINWQEGDGPGGSFEDPETSRVEYFSSTGPCIVDPGSGKETREKPTTCAADGLATSTTGFSEFLGTSASAPVAAAIATIVRAACFPRVVEYGEVMEMLTNYEYTVDYTNDADGAAETWGNEAGHGIISAAQMLAWVEENCSEACSGASGSTPAPTPTTAQPGSLGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGGECWCQDTDIDLRHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSSSMTSEACADYCANESPRNMYYATQYGAQCWCAEEVDLRHGEGRCAYACTGDAKTTCGGFEAFDLFEVNPLSPPTEDYYVGCFADDLEDRVLEDMISAVDMTLEACENHCTERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQCGGLVAFSLYERDTC 577
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: D8LQX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX7_ECTSI) HSP 1 Score: 406 bits (1043), Expect = 2.320e-129 Identity = 183/277 (66.06%), Postives = 219/277 (79.06%), Query Frame = 1 Query: 889 MTPSVCAAYCHRESASYAYYAIQYGNECWCQDTDIDLR-HGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSSSMTSEACADYCANESPRNKYYATQYGAQCWCAEEVDLRHGEGRCAYACTGDAKTTCGGFEAFDLFEVIPLSPPTEDYYVGCFADDLADRVLEDMISAVDMTLEACENHCTERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQCGGSVAFSLYERDTC 1716
MTP+VCA YC + +SY +YA QYG ECWCQD +DLR HG ATCDY CSGD SI CGGF +F+LYDLE LP+PP DDNYVGCFADD DRVLGA++SS+ MTSEACA YCA+ESP N YYATQ+G +CWCA EV LRHG+G C ACTGDA TTCGGF+AFDLFE+ PLSP +ED+Y GCFADD +DRVL D +S+ DM+L+ CE++CT +KPFFALQ+ ECWCGGC++LD+G ++DRHG C D PC+G+ +R CG AFSLY R TC
Sbjct: 1 MTPTVCADYCRGQPSSYTHYATQYGRECWCQDESVDLRRHGAATCDYQCSGDDSIVCGGFDSFSLYDLEEGELPSPPTDDNYVGCFADDQNDRVLGAKSSSNEMTSEACASYCADESPGNTYYATQWGHECWCAAEVHLRHGDGTCDMACTGDAGTTCGGFDAFDLFELGPLSP-SEDHYFGCFADDKSDRVLGDKMSSGDMSLQLCEDYCTAMDKPFFALQWGRECWCGGCDLLDEGH-RFDRHGTASCTDHPCTGEASRDCGAYDAFSLYYRGTC 275
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: D7FQI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI3_ECTSI) HSP 1 Score: 402 bits (1033), Expect = 2.600e-124 Identity = 197/363 (54.27%), Postives = 231/363 (63.64%), Query Frame = 1 Query: 805 TIAQPGSLGCYKDDPSDRVLTAMWSSPVMTPS---------------VCAAYCHRESA-------SYAYYAIQYGN----------------------------------ECWCQDTDIDLRHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSSSMTSEACADYCANESPRNKYYATQYGAQCWCAEEVDL-RHGEGRCAYACTGDAKTTCGGFEAFDLF--EVIPLSPPTEDYYVGCFADDLADRVLEDMISAVDMTLEACENHCTERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQCGGSVAFSLYERDTC 1716
+ Q SLGC+ DD SDRVLTA WSS MTP+ C C +S+ S+ Y ++ ECWCQ DIDLRHG+ TCDY CSGD+SI CGGF +FTLY+LE LP P DNYVGCFADD +DRVLG++ SS SMT E CA YCA++SP + YYATQ+G +CWCA +VD RHGEG C Y CTGD+ TTCGG++AFDLF E LSPP+EDYY+GCFADD DRVLED ISA DMTLE CE HCT +KPFFALQ+ ECWCGGCE+ DD D+YDRHG C D+PC+GD +RQCGG +FSLY RDTC
Sbjct: 18 STGQEESLGCFGDDRSDRVLTAEWSSSSMTPACWCQGPDIDLRHGDGTCDYVCSGDSSIKCGGFDSFTLYELESEGLPVAPMGDNYVGCFADDKEDRVLGSKMSSGSMTPECWCQGPDIDLRHGDGTCDYVCSGDSSIKCGGFDSFTLYELESEGLPVAPMGDNYVGCFADDKEDRVLGSKMSSGSMTPEVCAAYCADDSPSHTYYATQWGRECWCARDVDYSRHGEGSCDYTCTGDSGTTCGGYDAFDLFKLEEDSLSPPSEDYYLGCFADDKGDRVLEDKISASDMTLETCEEHCTALDKPFFALQWGKECWCGGCELQDDDLDRYDRHGIASCTDYPCTGDGSRQCGGYDSFSLYNRDTC 380
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: A0A6H5JLL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL4_9PHAE) HSP 1 Score: 350 bits (899), Expect = 2.590e-105 Identity = 163/262 (62.21%), Postives = 196/262 (74.81%), Query Frame = 1 Query: 958 YGNECWCQDTDIDLRHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSSSMTSEACADYCANESPRNKYYATQYGAQCWCAEEVDLRHGEGRCAYACTGDAKTTCGGFEAFDLFEVIPL---SPPTEDYYVGCFADDLADRVLEDMISAVDMTLEACENH-CTERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQCGGSVAFSLYERDTCGKFEV 1731
+ +CWCQD +IDLRHGE TCDYAC+GD S+ CGG +F+LY+LE A LPT P DD+YVGCFADD QDRVLG +TSSS MTSE CA YCANES NK+YATQYG +CWCA VDLR+GEG C YACTG +TTCGGFEAFDLFE+ + SPP+E YY+GCFADD DRVLED S+ +M+L+ +H C N A +++ CWCGGCE+LD+G +YDRHGA C +PC+G+ +R CGG AFSLY R TCG E
Sbjct: 23 FSRQCWCQDENIDLRHGEGTCDYACTGDGSVVCGGILSFSLYELEEAILPTAPTDDSYVGCFADDRQDRVLGVQTSSSEMTSEVCAAYCANESFGNKFYATQYGEECWCAPSVDLRYGEGTCDYACTGAVETTCGGFEAFDLFELDVVDRSSPPSEHYYLGCFADDQNDRVLEDETSSGNMSLQVSPSHNCLGANN---AAEHT--CWCGGCELLDEGLHRYDRHGATSCTGYPCTGEGSRACGGVYAFSLYYRGTCGSSET 279
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 177 bits (449), Expect = 1.260e-43 Identity = 93/202 (46.04%), Postives = 115/202 (56.93%), Query Frame = 1 Query: 826 LGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGNECWCQ-DTDIDL-RHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETS-SSSMTSEACADYCANESPRNKYYATQYGAQCWCA----EEVDLRHGEGRCAYACTGDAKTTCGGFEAFDLFEVIPLSPP 1410
+GC+ D DRV M +S MT +VC YC A+Y A QYG ECWC D +++ RH + CD+AC GDA+ CGGF AF LY + PT P D YVGCFADD +DR+LG E MT C YC E +YATQYG +CWC EE RHG G C C+GD CGGF+AF+LF+ ++ P
Sbjct: 436 VGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYM--ATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKI---TEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYC--EERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKFDGIAEP 630
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: D8LED9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI) HSP 1 Score: 164 bits (414), Expect = 5.910e-40 Identity = 92/208 (44.23%), Postives = 111/208 (53.37%), Query Frame = 1 Query: 790 PAPTPTIAQPGSLGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGNECWCQ---DTDIDLRHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSS-SMTSEACADYCANESPRNKYYATQYGAQCWCA----EEVDLRHGEGRCAYACTGDAKTTCGGFEAFDLFE 1389
P P A +GC+ D+ DRV M +S MT +VC YC A+Y A QYG ECWC +T+ D RH + CD+AC GD + CGGF AF LY + P P D YVGCFAD+ +D VLG E S MT C YC E +YATQ G +CWC EE R G G C C+GD CGGF AF+LF+
Sbjct: 391 PVTLPVEASYSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYM--ATQYGIECWCSVDAETEYD-RHSDGVCDHACGGDEADYCGGFDAFDLYKI---TEPREPTGDEYVGCFADNPEDWVLGGEIKSQPDMTQAVCRTYC--EDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACGGFNAFNLFK 590
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: D8LEK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK9_ECTSI) HSP 1 Score: 161 bits (407), Expect = 6.410e-40 Identity = 99/248 (39.92%), Postives = 133/248 (53.63%), Query Frame = 1 Query: 826 LGCYKDDPSDRVLTAM-WSSPVMTPSVCAAYCHRESASYAYYAIQYGNECWCQDTDIDLR-HGEAT-CDYACSGDASISCGGFYAFTLYDLEGANLPTP---PADDN---YVGCFADDLQDRVLG-AETSSSSMTSEACADYCANESPRNKYYATQYGAQCWCAEE-VDLR-HGEGR-CAYACTGDAKTTCGGFEAFDLFEV------IPLSPPTED---YYVGCFADDLADRVLEDMI-SAVDMTLE 1500
LGCY+DDP DR++ + S MT +C C Y+A QY ECWC D D HGE+T C YACSGD S +CGGF A +Y + P+P P + +GC+ADD +DR++ S SSMT+E C C + Y+ATQYG +CWC D HGE C YAC+GD TCGGF+A +++ P PTE +GC+ DD DR++++++ S MT E
Sbjct: 200 LGCYEDDPEDRIMDNLALSDSSMTTELCELTC----VGSTYFATQYRRECWCGSADADYALHGESTGCTYACSGDTSQTCGGFNAANVYLYPDDSTPSPTPSPIQEGPSPALGCYADDPEDRIMDDLVLSDSSMTTELCELTCEGST----YFATQYGRECWCGSAGADYALHGESTDCTYACSGDTDQTCGGFDAANVYRYPDDSTPSPTPSPTEAASFVALGCYGDDREDRIMDELVLSDPSMTTE 439
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: D7FXK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK6_ECTSI) HSP 1 Score: 162 bits (411), Expect = 1.240e-39 Identity = 89/203 (43.84%), Postives = 118/203 (58.13%), Query Frame = 1 Query: 826 LGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGNECWCQD-TDIDL-RH-----GEAT-CDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETS-SSSMTSEACADYCANESPRNKYYATQYGAQCWCAEEVDL----RHGEGRCAYACTGDAKTTCGGFEAFDLFEVI 1395
+GC+ D+ +DRVL + SP+MT ++CA +C A+Y A+QYG ECWC T++D RH G+A CD +C G + +CGG YAF LY L+G P P YVGCFADD +DR L + +MT + C YC E + +YATQYG +CWC D+ RHG+G C C GD CGG+ AF LFE +
Sbjct: 317 IGCFADNKTDRVLGHLMKSPLMTSAMCAEHCFGRRATYM--ALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCGGLYAFDLYKLDG---PMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCRVYC--ERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEYL 512
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: A0A8K0SGR6_9HYPO (WSC domain-containing protein n=1 Tax=Stachybotrys elegans TaxID=80388 RepID=A0A8K0SGR6_9HYPO) HSP 1 Score: 156 bits (394), Expect = 1.100e-38 Identity = 95/307 (30.94%), Postives = 142/307 (46.25%), Query Frame = 1 Query: 829 GCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGNECWCQDTDIDLRHG-----EATCDYACSGDASISCGGFYAFTLYDLEGANLPTPP---ADDNYVGCFADDLQDRVLGAETSSSSMTSEACADYCANESPRNKYYATQYGAQCWCAEEVDLRHGEGR---CAYACTGDAKTTCGGFEAFDLFEVIPLSPPTEDYY-VGCFADDLAD-RVLEDMISAVDMTLEACENHCTERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQCGGSVAFSLYERD 1710
GCY++ R L + + P MT +C +ASYAY+ +QYG+ECW +T LR G + C C+GD S +CG L+ A +P + + GC+ D L R L +MT + C ++CA + Y +YG +CWC + +D+ + C C GD CG DL+++ +PP DYY +GC+ D A R L ++ + +MT + C R F ++Y ECW G +D P + G D PC+G+ CGG F+LY D
Sbjct: 87 GCYEEPKKGRALDHVATDPAMTVELCGEI----AASYAYFGLQYGSECWYGNT---LRKGSHQVDDDACSMPCAGDPSQTCGNGRKLNLWRRSDAYIPVDKEKIGEYDLQGCYVDTLNPRALRRVLGDDNMTPDMCVEFCAGST----YMGLEYGRECWCDDVLDITSFKATLDDCQMPCAGDLSAMCGSPNRMDLYKLNSPAPPDADYYTMGCYYDIGAHHRALPELYADDNMTPQLCAGFAARRGFKHFGVEYGRECWAG--PQID--PAAFPTDGC----DMPCAGNDEVMCGGRTRFNLYTYD 374
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE) HSP 1 Score: 157 bits (398), Expect = 1.930e-38 Identity = 90/226 (39.82%), Postives = 113/226 (50.00%), Query Frame = 1 Query: 826 LGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGNECWCQ-DTDIDL-RHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETS-SSSMTSEACADYCANESPRNKYYATQYGAQCWCAEEVD----LRHGEGRCAYACTGDAKTTCG------------------------GFEAFDLFEVIPLSPP 1410
+GC+ D DRV M +SP MT +VC YC A++ A Q+G ECWC D +I+ RH + CD C G+A+ CGGF AF LY + PT P D YVGCFADD +DR+LG E MT C YC E +YATQYG +CWC D RHG G C C+GD CG GF+AF+LF+ ++ P
Sbjct: 14 VGCFADSKDDRVFEYMKTSPTMTTAVCLEYCLDRRATFM--ATQFGIECWCSVDAEIEYDRHSDGVCDCECGGEATDICGGFDAFDLYKI---TEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQTVCRTYC--EERDAYFYATQYGDECWCGMSEDEQDYKRHGRGSCLAGCSGDPTVACGRDFQVVIYKHESFQPFLAVTLVPGGFDAFNLFKFDGVAEP 232 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig102.874.1 >prot_Ecto-sp6_S_contig102.874.1 ID=prot_Ecto-sp6_S_contig102.874.1|Name=mRNA_Ecto-sp6_S_contig102.874.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=372bp MEMLTNYEYTIDYTNDADGAAETWGNEAGHGIISASQMLAWVEENCSEACback to top mRNA from alignment at Ecto-sp6_S_contig102:556093..565577+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig102.874.1 ID=mRNA_Ecto-sp6_S_contig102.874.1|Name=mRNA_Ecto-sp6_S_contig102.874.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9485bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:556093..565577+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig102:556093..565577+ >mRNA_Ecto-sp6_S_contig102.874.1 ID=mRNA_Ecto-sp6_S_contig102.874.1|Name=mRNA_Ecto-sp6_S_contig102.874.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1116bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:556093..565577+ (Ectocarpus species6 EcLAC_371)back to top |