mRNA_Ecto-sp6_S_contig102.860.1 (mRNA) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig102.860.1 vs. uniprot
Match: D7G976_ECTSI (Fibronectin type III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G976_ECTSI) HSP 1 Score: 491 bits (1264), Expect = 7.060e-175 Identity = 252/264 (95.45%), Postives = 258/264 (97.73%), Query Frame = 1
Query: 1 MSLLGALFLALTSGAVIGRASGQSVESSACEFSTFLSLRAEWDADDESCQKKLSFELWTFMKAEGSAQNPDAQRVRASCLEHEETGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVASVLEAYPRNKRGGRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYFGDAATLKDLGDLPEVEVVKEIPEGYTGVDEGSAMIELAYDIASGATFKFSTAYGGEQ 792
M LLGALFLALTSGAVIGRASG+SVESSACEFSTFLSLRAEWDADDE CQKKLSFELWTFM+AEGSAQ+PDAQRVRASC+EHEE G+VELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATA+TFEAFCEDENIERVTRVASVLEAYPRNKR GRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYFGDAATLKD GDLPEVEVVKEIPEGY GVDEGSAMIELAYDIASGATFKFSTAYGGEQ
Sbjct: 1 MPLLGALFLALTSGAVIGRASGESVESSACEFSTFLSLRAEWDADDEPCQKKLSFELWTFMQAEGSAQSPDAQRVRASCVEHEEIGVVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAMTFEAFCEDENIERVTRVASVLEAYPRNKRSGRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYFGDAATLKDSGDLPEVEVVKEIPEGYEGVDEGSAMIELAYDIASGATFKFSTAYGGEQ 264
BLAST of mRNA_Ecto-sp6_S_contig102.860.1 vs. uniprot
Match: A0A6H5KTN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTN7_9PHAE) HSP 1 Score: 344 bits (882), Expect = 1.060e-117 Identity = 171/189 (90.48%), Postives = 180/189 (95.24%), Query Frame = 1
Query: 112 LRAEWDADDESCQKKLSFELWTFMKAEGSAQNPDAQRVRASCLEHEETGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVASVLEAYPRNKRGGRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYFGDAATLKDLGDLPEVEVVK 678
+RA+WDADDE CQKKLSFELWTFMKAEGSA NPDAQRVRASC+EHEE GLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVA V+EAYP NK GG+TRRHLQS+TS+AGQAHQVAELIDGLKNLGCTRTTGED+KLCVLSDSFNY G AATLKD GDLPEVEV+K
Sbjct: 15 IRADWDADDEPCQKKLSFELWTFMKAEGSAHNPDAQRVRASCVEHEEIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVAPVVEAYPFNKHGGQTRRHLQSSTSQAGQAHQVAELIDGLKNLGCTRTTGEDKKLCVLSDSFNYLGKAATLKDSGDLPEVEVIK 203
BLAST of mRNA_Ecto-sp6_S_contig102.860.1 vs. uniprot
Match: UPI00196B5695 (Ig-like domain-containing protein n=1 Tax=Aquisphaera sp. JC669 TaxID=2712864 RepID=UPI00196B5695) HSP 1 Score: 71.6 bits (174), Expect = 2.150e-10 Identity = 37/71 (52.11%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 571 TGEDQKLCVLSDSFNYFGDAATLKDLGDLPE-VEVVKEIPEGYTGVDEGSAMIELAYDIASGATFKFSTAY 780
TG + V+SDSFNY G AT GDLP V +VKEIP G+TG DEG M + Y IA GAT F++ Y
Sbjct: 185 TGAGVSVGVMSDSFNYLGGYATDISTGDLPSGVNIVKEIPSGFTGTDEGRGMAQNVYKIAPGATLSFASGY 255
BLAST of mRNA_Ecto-sp6_S_contig102.860.1 vs. uniprot
Match: A0A7K3NRW6_9DELT (S8 family serine peptidase n=1 Tax=Desulfovibrio sulfodismutans TaxID=63561 RepID=A0A7K3NRW6_9DELT) HSP 1 Score: 59.3 bits (142), Expect = 2.130e-6 Identity = 40/101 (39.60%), Postives = 54/101 (53.47%), Query Frame = 1
Query: 487 QSTTSEAGQAHQVAEL-IDGLKNLGCTRTTGEDQKLCVLSDSFNYFGDAATLKDLGDLPEVEVVKEIPEGYTGVDEGSAMIELAYDIASGATFKFSTAYGG 786
+STT+E AH + DG TG K+ V+SDS +Y A L+ GDLP V + G TG EG+AM+E+ YD+A A+ F+TA GG
Sbjct: 182 KSTTTEGDVAHSAPTVRTDGY--------TGAGVKIGVISDSVDYL---ANLQATGDLPATVTVLQDSPGQTG--EGTAMLEIVYDLAPSASLYFATAQGG 269
BLAST of mRNA_Ecto-sp6_S_contig102.860.1 vs. uniprot
Match: A0A845YP49_9CYAN (S8 family serine peptidase n=1 Tax=Symploca sp. SIO2G7 TaxID=2607798 RepID=A0A845YP49_9CYAN) HSP 1 Score: 59.3 bits (142), Expect = 2.220e-6 Identity = 34/73 (46.58%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 571 TGEDQKLCVLSDSFNYFGDAATLKDLGDLPEVEVVKEIPEGYTGVDEGSAMIELAYDIASGATFKFSTAYGGE 789
TG + VLSDSF+ G A + GDLP+V V+ ++P G G DEG AM++L DIA GA F TA+ G+
Sbjct: 121 TGAGVTVGVLSDSFDNLGGATADRLSGDLPDVNVLLDLPGG--GSDEGRAMLQLIADIAPGADLAFHTAFLGQ 191
BLAST of mRNA_Ecto-sp6_S_contig102.860.1 vs. uniprot
Match: A0A0G4ES30_VITBC (Subtilisin n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ES30_VITBC) HSP 1 Score: 58.9 bits (141), Expect = 3.090e-6 Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 595 VLSDSFNYFGDAATLKDLGDLPE-VEVVKEIPEGYTGVDEGSAMIELAYDIASGAT-FKFSTAYGGE 789
LSDS++ G+AA L++LGDLPE V V+KE EG + DEG M+EL YD+A G F F TA+ G+
Sbjct: 304 ALSDSYDVRGNAAILRELGDLPEDVAVLKEGVEGMS--DEGQGMMELMYDVAPGLPKFAFHTAFWGQ 368
BLAST of mRNA_Ecto-sp6_S_contig102.860.1 vs. uniprot
Match: A0A2T2S5Q7_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium QH_10_64_37 TaxID=1919091 RepID=A0A2T2S5Q7_9BACT) HSP 1 Score: 58.5 bits (140), Expect = 4.240e-6 Identity = 45/115 (39.13%), Postives = 56/115 (48.70%), Query Frame = 1
Query: 490 STTSEAGQAH--QVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYFGDAATLKD---LGDLPEV------EVVKEIPEGYTGVD-----EGSAMIELAYDIASGATFKFSTAYGG 786
S SEA AH A L G T+G QK+CVLSDS+N A + + GDLP ++ E Y G D EG AM++L +DIA GAT F TA+GG
Sbjct: 191 SVESEADSAHAADTARLNTG--------TSGNGQKVCVLSDSYNTASVATSASEDVQSGDLPGNGNPAGRTTPVDVLEDYDGTDPSPTDEGRAMLQLIHDIAPGATLGFHTAFGG 297
BLAST of mRNA_Ecto-sp6_S_contig102.860.1 vs. uniprot
Match: UPI0019DA8FD1 (S8 family serine peptidase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019DA8FD1) HSP 1 Score: 55.5 bits (132), Expect = 4.230e-5 Identity = 32/80 (40.00%), Postives = 45/80 (56.25%), Query Frame = 1
Query: 571 TGEDQKLCVLSDSFNYFGDAATLKDLGDLPEVEVVKEIPEGYTGV-------DEGSAMIELAYDIASGATFKFSTAYGGE 789
TG Q + VLSDSF++ GDA + GDLP + + + DEG AM++LA+D+A GA+ F TA+ GE
Sbjct: 169 TGLGQTIGVLSDSFDHLGDAGADQTNGDLPASVISLDDSANCGSILVQASCRDEGRAMMQLAHDVAPGASMAFHTAFTGE 248
BLAST of mRNA_Ecto-sp6_S_contig102.860.1 vs. uniprot
Match: A0A0B1U412_9DELT (Peptidase_S8 domain-containing protein n=3 Tax=unclassified Desulfovibrio TaxID=2593640 RepID=A0A0B1U412_9DELT) HSP 1 Score: 55.1 bits (131), Expect = 5.190e-5 Identity = 39/100 (39.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query: 487 QSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYFGDAATLKDLGDLPEVEVVKEIPEGYTGVDEGSAMIELAYDIASGATFKFSTAYGG 786
+STT+E AH A ++ + G T G K+ V+SDS +Y A L+ GDLP V + G +G EG+AM+E+ YD+A A F+TA+GG
Sbjct: 124 KSTTTEGDVAHS-APIV---RTAGYT---GAGIKIGVISDSVDYL---AQLQATGDLPATVTVLQDASGNSG--EGTAMLEIVYDLAPSAPLYFATAWGG 211
BLAST of mRNA_Ecto-sp6_S_contig102.860.1 vs. uniprot
Match: A0A853IPL6_9BURK (Uncharacterized protein n=1 Tax=Ottowia beijingensis TaxID=1207057 RepID=A0A853IPL6_9BURK) HSP 1 Score: 54.3 bits (129), Expect = 6.480e-5 Identity = 31/72 (43.06%), Postives = 41/72 (56.94%), Query Frame = 1
Query: 571 TGEDQKLCVLSDSFNYFGDAATLKDLGDLPEVEVVKEIPEGYTGVDEGSAMIELAYDIASGATFKFSTAYGG 786
TG K+CVLSD N A + GDLP V +P DEG+AM+E+ YD+A GA+ F+T +GG
Sbjct: 15 TGAGAKVCVLSDGVNTL---AARQGTGDLPAGVTV--VPGQAGSGDEGTAMLEIVYDMAPGASLYFATGFGG 81 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig102.860.1 >prot_Ecto-sp6_S_contig102.860.1 ID=prot_Ecto-sp6_S_contig102.860.1|Name=mRNA_Ecto-sp6_S_contig102.860.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=264bp MSLLGALFLALTSGAVIGRASGQSVESSACEFSTFLSLRAEWDADDESCQback to top mRNA from alignment at Ecto-sp6_S_contig102:406750..410321- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig102.860.1 ID=mRNA_Ecto-sp6_S_contig102.860.1|Name=mRNA_Ecto-sp6_S_contig102.860.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3572bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:406750..410321- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig102:406750..410321- >mRNA_Ecto-sp6_S_contig102.860.1 ID=mRNA_Ecto-sp6_S_contig102.860.1|Name=mRNA_Ecto-sp6_S_contig102.860.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=792bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:406750..410321- (Ectocarpus species6 EcLAC_371)back to top |