Homology
BLAST of mRNA_Ecto-sp6_S_contig102.854.1 vs. uniprot
Match:
D7G976_ECTSI (Fibronectin type III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G976_ECTSI)
HSP 1 Score: 490 bits (1261), Expect = 2.020e-174
Identity = 255/264 (96.59%), Postives = 260/264 (98.48%), Query Frame = 1
Query: 1 MSLLGALFLALTSGAVIGRASGESVESSACEFSTFLSLRAEWDADDEPCQKKLSFELWTFMKAEGSAQNPDAQRVRASCVEHEEIGVVELITPKGYTMSDSVSAAPGSVVSETDNASSYQGATATTFEAFCEDENIERVTRVASVLEAYPRNKQGGQTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYFGDAATLKDLGDLPEVEVVKEIPEGYEGVDEGSAMIELAYDIASGATFKFSTAYGGEQ 792
M LLGALFLALTSGAVIGRASGESVESSACEFSTFLSLRAEWDADDEPCQKKLSFELWTFM+AEGSAQ+PDAQRVRASCVEHEEIGVVELITPKGYTMSDSVSAAPGSVVSETD+ASSYQGATA TFEAFCEDENIERVTRVASVLEAYPRNK+ G+TRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYFGDAATLKD GDLPEVEVVKEIPEGYEGVDEGSAMIELAYDIASGATFKFSTAYGGEQ
Sbjct: 1 MPLLGALFLALTSGAVIGRASGESVESSACEFSTFLSLRAEWDADDEPCQKKLSFELWTFMQAEGSAQSPDAQRVRASCVEHEEIGVVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAMTFEAFCEDENIERVTRVASVLEAYPRNKRSGRTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYFGDAATLKDSGDLPEVEVVKEIPEGYEGVDEGSAMIELAYDIASGATFKFSTAYGGEQ 264
BLAST of mRNA_Ecto-sp6_S_contig102.854.1 vs. uniprot
Match:
A0A6H5KTN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTN7_9PHAE)
HSP 1 Score: 341 bits (874), Expect = 1.760e-116
Identity = 172/189 (91.01%), Postives = 181/189 (95.77%), Query Frame = 1
Query: 112 LRAEWDADDEPCQKKLSFELWTFMKAEGSAQNPDAQRVRASCVEHEEIGVVELITPKGYTMSDSVSAAPGSVVSETDNASSYQGATATTFEAFCEDENIERVTRVASVLEAYPRNKQGGQTRRHLQSTTSEAGQAHQVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYFGDAATLKDLGDLPEVEVVK 678
+RA+WDADDEPCQKKLSFELWTFMKAEGSA NPDAQRVRASCVEHEEIG+VELITPKGYTMSDSVSAAPGSVVSETD+ASSYQGATA TFEAFCEDENIERVTRVA V+EAYP NK GGQTRRHLQS+TS+AGQAHQVAELIDGLKNLGCTRTTGED+KLCVLSDSFNY G AATLKD GDLPEVEV+K
Sbjct: 15 IRADWDADDEPCQKKLSFELWTFMKAEGSAHNPDAQRVRASCVEHEEIGLVELITPKGYTMSDSVSAAPGSVVSETDHASSYQGATAITFEAFCEDENIERVTRVAPVVEAYPFNKHGGQTRRHLQSSTSQAGQAHQVAELIDGLKNLGCTRTTGEDKKLCVLSDSFNYLGKAATLKDSGDLPEVEVIK 203
BLAST of mRNA_Ecto-sp6_S_contig102.854.1 vs. uniprot
Match:
UPI00196B5695 (Ig-like domain-containing protein n=1 Tax=Aquisphaera sp. JC669 TaxID=2712864 RepID=UPI00196B5695)
HSP 1 Score: 67.8 bits (164), Expect = 4.200e-9
Identity = 36/71 (50.70%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 571 TGEDQKLCVLSDSFNYFGDAATLKDLGDLPE-VEVVKEIPEGYEGVDEGSAMIELAYDIASGATFKFSTAY 780
TG + V+SDSFNY G AT GDLP V +VKEIP G+ G DEG M + Y IA GAT F++ Y
Sbjct: 185 TGAGVSVGVMSDSFNYLGGYATDISTGDLPSGVNIVKEIPSGFTGTDEGRGMAQNVYKIAPGATLSFASGY 255
BLAST of mRNA_Ecto-sp6_S_contig102.854.1 vs. uniprot
Match:
A0A845YP49_9CYAN (S8 family serine peptidase n=1 Tax=Symploca sp. SIO2G7 TaxID=2607798 RepID=A0A845YP49_9CYAN)
HSP 1 Score: 58.2 bits (139), Expect = 5.370e-6
Identity = 34/73 (46.58%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 571 TGEDQKLCVLSDSFNYFGDAATLKDLGDLPEVEVVKEIPEGYEGVDEGSAMIELAYDIASGATFKFSTAYGGE 789
TG + VLSDSF+ G A + GDLP+V V+ ++P G G DEG AM++L DIA GA F TA+ G+
Sbjct: 121 TGAGVTVGVLSDSFDNLGGATADRLSGDLPDVNVLLDLPGG--GSDEGRAMLQLIADIAPGADLAFHTAFLGQ 191
BLAST of mRNA_Ecto-sp6_S_contig102.854.1 vs. uniprot
Match:
A0A0G4ES30_VITBC (Subtilisin n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ES30_VITBC)
HSP 1 Score: 57.4 bits (137), Expect = 9.990e-6
Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 595 VLSDSFNYFGDAATLKDLGDLPE-VEVVKEIPEGYEGV-DEGSAMIELAYDIASGAT-FKFSTAYGGE 789
LSDS++ G+AA L++LGDLPE V V+KE G EG+ DEG M+EL YD+A G F F TA+ G+
Sbjct: 304 ALSDSYDVRGNAAILRELGDLPEDVAVLKE---GVEGMSDEGQGMMELMYDVAPGLPKFAFHTAFWGQ 368
BLAST of mRNA_Ecto-sp6_S_contig102.854.1 vs. uniprot
Match:
A0A2T2S5Q7_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium QH_10_64_37 TaxID=1919091 RepID=A0A2T2S5Q7_9BACT)
HSP 1 Score: 57.4 bits (137), Expect = 1.020e-5
Identity = 47/119 (39.50%), Postives = 59/119 (49.58%), Query Frame = 1
Query: 490 STTSEAGQAH--QVAELIDGLKNLGCTRTTGEDQKLCVLSDSFNYFGDAATLKD---LGDLP----------EVEVVKEIPEGYEGVD-----EGSAMIELAYDIASGATFKFSTAYGG 786
S SEA AH A L G T+G QK+CVLSDS+N A + + GDLP V+V+ E Y+G D EG AM++L +DIA GAT F TA+GG
Sbjct: 191 SVESEADSAHAADTARLNTG--------TSGNGQKVCVLSDSYNTASVATSASEDVQSGDLPGNGNPAGRTTPVDVL----EDYDGTDPSPTDEGRAMLQLIHDIAPGATLGFHTAFGG 297
BLAST of mRNA_Ecto-sp6_S_contig102.854.1 vs. uniprot
Match:
A0A7K3NRW6_9DELT (S8 family serine peptidase n=1 Tax=Desulfovibrio sulfodismutans TaxID=63561 RepID=A0A7K3NRW6_9DELT)
HSP 1 Score: 54.3 bits (129), Expect = 9.650e-5
Identity = 39/100 (39.00%), Postives = 52/100 (52.00%), Query Frame = 1
Query: 490 STTSEAGQAHQVAEL-IDGLKNLGCTRTTGEDQKLCVLSDSFNYFGDAATLKDLGDLPEVEVVKEIPEGYEGVDEGSAMIELAYDIASGATFKFSTAYGG 786
STT+E AH + DG TG K+ V+SDS +Y A L+ GDLP V + G G EG+AM+E+ YD+A A+ F+TA GG
Sbjct: 183 STTTEGDVAHSAPTVRTDGY--------TGAGVKIGVISDSVDYL---ANLQATGDLPATVTVLQDSPGQTG--EGTAMLEIVYDLAPSASLYFATAQGG 269
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.854.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 7
0 1 Expect = 2.02e-174 / Id = 96.59 Expect = 1.76e-116 / Id = 91.01 Expect = 4.20e-9 / Id = 50.70 Expect = 5.37e-6 / Id = 46.58 Expect = 9.99e-6 / Id = 52.94 Expect = 1.02e-5 / Id = 39.50 Expect = 9.65e-5 / Id = 39.00 Sequence D7G976_ECTSI A0A6H5KTN7_9PHAE UPI00196B5695 A0A845YP49_9CYAN A0A0G4ES30_VITBC A0A2T2S5Q7_9BACT A0A7K3NRW6_9DELT back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig102.854.1
>prot_Ecto-sp6_S_contig102.854.1 ID=prot_Ecto-sp6_S_contig102.854.1|Name=mRNA_Ecto-sp6_S_contig102.854.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=264bp
MSLLGALFLALTSGAVIGRASGESVESSACEFSTFLSLRAEWDADDEPCQ back to top mRNA from alignment at Ecto-sp6_S_contig102:293023..296647-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig102.854.1 ID=mRNA_Ecto-sp6_S_contig102.854.1|Name=mRNA_Ecto-sp6_S_contig102.854.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3625bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:293023..296647- (Ectocarpus species6 EcLAC_371)ATGTCTCTCCTGGGGGCACTCTTTTTGGCACTCACCAGCGGTGCAGTGAT
CGGACGCGCTTCCGGCGAAAGTGTCGAAAGCTCGGCGTGCGAGTTTTCAA
CGTTCCTTTCGCTCAG GTGCGGCGTTGCATGTGCACGGCGTGTCGTTGTT
TTTTTTGTTTTTTTTCATCGAAGAAGACCGCTGTAGGATTCCGTCGGGAT
CGTGTGCTTCGGGAATGTTTGCCTTCACTGCTGCAAACAAGCACCCAATC
GCGGGCTGATATCGAGCAGGACCACTTCTAAAGAACCACAGCGTTCTACT
CGCGTGGAGCAAGAACATTATTGCAAACAAACGTGAAGCGTGTGCGACTC
CTACCTATGATAAACCCTTTCGCTTTCATTGCGGCCGGAACATGTTTCCG
GTGTCTTTGCTTGTGGGCATTTTCCTTAAAGTTCAACGTGGCTGCTGTGT
CCATGGGAGGTCTTCTCAGCACTTGGTCATTTGACGGTGTCGAACGAAAT
AAACAGCCCAATGAACTACGGTGCATCCTCGACGCACCCCTGGAGTTCAT
GAGATGTAGACATCGAAAACGTAGTGTTGTGTTAACTTGCGGGGATCGAC
GTTCGAGAGTTCTAATGCACAGTGCCAAAACACATGTCGTATGATATCGT
TCGTTCATCAGAGCGGAGTGGGATGCGGACGACGAGCCGTGCCAGAAAAA
GCTATCCTTCGAGCTATGGACTTTCATGAAGGCCGAGGGATCAGCCCAGA
ACCCTGACGCTCAGCGCGTTCGAGCCAGCTGCGTCGAGCATGAAGAAATT
GGAGTGGTAGAACTCATCACTCCCAAG GTGCACGATTGGTTCTATGTGGT
GATGTTAGATTTGACGTACCGACACAACCATTCCTCATAGGGTGTTCGTC
TAAGCCGAACGCAAACGTTGTTGTAAGTGGTACACACAACGCTGGAGGCA
TCACAGCGACGCTACCTTTTCCATCTTGTCGGGAATGAACGGTACATACT
CTTCATCCAAGATGGGCAATTTCATTTGTTGAAAACCTACCTTCTCTGCC
TCTTCATCGCCTTTGAGTGCAGGGATACACCATGTCTGACAGCGTGAGCG
CGGCCCCAGGAAGCGTGGTCAGCGAGACCGACAATGCCTCTTCGTACCAG
GGCGCCACCGCCACGACGTTCGAAG GTGGCCATGAAACGATTGCCTCCCG
CTAGGTAGTCAGTGATAATATATAAATCGTCAAGAACGTTTTGGCGTTAC
GCATGCAATACTCCCTCCGTAGATCCTGTACTCATAGCTGCCCATCACCA
ATCAAAAGGCTGATGACGTGCACTGCTGCATCGATTGGTACCGTTCGCAC
GAATTTCAACACGTAGCGTTCTGCGAGGACGAGAACATTGAGCGAGTTAC
TCGGGTTGCCTCTGTTCTGGAGGCGTACCCGCGCAACAAACAGGGTGGCC
AAACGCGGCGCCACCTTCAAAGCACCACCAGCGAGGCAGGACAAGCGCAT
CAA GTAAGACGACCTCGACTATTGTTGCATTTGGTGGCATCGTGCAGATC
AAAAGGTTGGGGCAAGACCACCATGTTTGTCCTTTGGATTGAAGACTTGG
CGACATGAAATTCGACATATTTAACGGATTCCCGACAGTAAATCAACTAC
TTCCCTGCCTTGAAAACGGTTGGCAAAGCAAGTGGGACCCGTTTTAACCG
ACTTCTCAGAAAACCAAACACGCCACGTTTAGAATTGGACCCGTCGCACC
GCCAAATGAATGTTTGCCGAATAATGCAGATGTTGAGTTTCGTACGGGTG
CAACCTGATATGTCAACCACAGGTAGCCGAGCTCATCGACGGGCTGAAGA
ACCTCGGGTGTACGAGAACAACGGGGGAAGATCAAAAACTCTGTGTTTTG
TCAGACAGCTTCAACTACTTTGGCGATGCCGCAACCCTGAAGGATTTGGG
AGACCTGCCCGAAGTCGAGGTCGTCAAG GTACGACACAATACAAGTGGAT
GTCGACCCACAAGGACCCGGATCGTTTGATCCTGAAACCTATTGAGTTAC
TGTAGTTTCTTTTGAACAGTGATGTCGCACATTACTCGCAGGGTTTGCAG
GTTCTTCTCGTTCTCCGAAACGCCGGACAAAGTTGTTGACAACACGAACT
ACGGGCAACGACAGACATACAACCCAAGTCTCGTGTTGGGTAACAATTTT
CTGATGACCATACAGAGAGGCTGTTATCAGCAGGTATCATTCCATATATT
GTGTTTCACAAGCGATCGATATTGGGTTGCATAAGATATCGAAATTCCAC
GCAGGGAGAATCAGTAAATTGCATCTCACGCCAAACATCCGTGGGTGAGT
TCTGTTAGCGATAAAACATTCACAGATTTCTACGGAGACTCACAAACGGA
TTGCGAATGGTGGACACTTCAAATACCGGACAGTCTGACGTCAGTACGGC
ACCAATATCCGTGGAAACAGGCAAACCGGAAATTCTATACTCTCCCGTTG
GACACCACACGTCAAAAACACGAAATAGAGCCGTCGAACCGCTCTCTAGC
CATTGTTTGTGACGAGACACGAAGACGCAAACCCTATTTTTGGCAAGTCT
GCCACAGTTCTTGGTGTTGATCCCCGGCCCCAAGGCAAGCCACACGCAAT
TTGCTCCAGGTGAAATTGCGATCTGCGTGTACCTAAAATCTTACAAACGC
GATCGACCAAGACCCAAGCGCAGCGCCGACACGCAAGCTCGATATGCCCT
TATAACCCATTCCCTTGATGTTCGCTGATGTTGGTGACTAAAAAACAAAT
ACGCGTATTCTGTCATTTTCCAGGAAATCCCCGAAGGTTATGAGGGCGTT
GACGAAG GTGTGTGCGGTCTCTATCTTTGGTATGTTGACGCATGTTTGCA
CGTGCGTTCTACGTCCCATCGATTCTTGATGCCATTCTGCACGCTGTGTC
CGATTTAGGAACGCCAACCCCTTCGTCATTGGGTTACTCACTTTACCTGT
ACCACCATCCCATGAACCTATTAGCAGCACGGTTCAGCTCAGGTCCCACT
CTCCAGCTGAATCTCCATGTGCGCGTGTTGTAACCCACGAAAGATCGAAA
CGATTGCTGCACCTGCGCCTTAAGTATGAACCACAAGCAAGCACAAAGGA
GGAAAGGGTGAAAAAAATAGTACGAGTAGATAGATATCTCGGTAGACGTG
TAATTTTTTGTTTCATCGTACCTGCCGTTTCTGTTTTCAATCTGGAGAAT
GAGGGTACGCCGCCCCCTCACGGTGCCCAGGGTCACGGCCTTGAAAATAC
TTCGCCGTTTTTACCCAAACTGAGACGACGTAGTTCCGATGATTAACTGG
TGGTCGATGCAAAGAAAAACAATTACGCGCGTACACCTGTGGTCTAGTGC
GGTATTTTGGACTGAGAAACTCTTTCTCTATCCTCTGGACATGCTTCATC
TTGTCTTCATGCACGCAAGTTTCATTTTTACACTCTGCACTAGCGTCAAG
AGTTGGCGTTCTGATACGCATCCACCGCGCGTGTTTGGTATCTAGGATCT
GCCATGATAGAGCTCGCGTACGATATCGCGTCTGGAGCAACGTTCAAGTT
CAGCACGGCCTATGGTGGCGAGCAG back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig102:293023..296647-
>mRNA_Ecto-sp6_S_contig102.854.1 ID=mRNA_Ecto-sp6_S_contig102.854.1|Name=mRNA_Ecto-sp6_S_contig102.854.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=792bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:293023..296647- (Ectocarpus species6 EcLAC_371) back to top