prot_Ecto-sp6_S_contig102.842.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig102.842.1
Unique Nameprot_Ecto-sp6_S_contig102.842.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length234
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.842.1 vs. uniprot
Match: D7G7E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E7_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 1.200e-30
Identity = 61/63 (96.83%), Postives = 63/63 (100.00%), Query Frame = 0 
Query:  138 KVLVRLRHVYDHDAELYEEFSRELLSPLLRLVPSALSSLDAVRLSSRVVVSLRENCVACLVRK 200
            +VLVRLRHVYDHDAELYEEFSRELLSP+LRLVPSALSSLDAVRLSSRVVVSLRENCVACLVRK
Sbjct:   34 EVLVRLRHVYDHDAELYEEFSRELLSPVLRLVPSALSSLDAVRLSSRVVVSLRENCVACLVRK 96
[Close]
BLAST of mRNA_Ecto-sp6_S_contig102.842.1 vs. uniprot
Match: D7FHF4_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF4_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 5.290e-9
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0 
Query:  200 KEVVHDLAAALYRLLSKRDPLLKAEAFRVAEIVLA 234
            KEVVHDLAAALYRLLSKRDPLLKAEAFRVAEIVLA
Sbjct:  437 KEVVHDLAAALYRLLSKRDPLLKAEAFRVAEIVLA 471
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7E7_ECTSI1.200e-3096.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHF4_ECTSI5.290e-9100.00Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig102contigEcto-sp6_S_contig102:175063..178692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig102.842.1mRNA_Ecto-sp6_S_contig102.842.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig102 175063..178692 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig102.842.1 ID=prot_Ecto-sp6_S_contig102.842.1|Name=mRNA_Ecto-sp6_S_contig102.842.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=234bp
MAGTRHHSTRTVQVPRLLYATCGGDLGTRVTYQSRLSALGFGRDLSSGGG
GGGGGSMWDPDPMAADDDDEDGEDGGGGAGGVQGFVTEWHGAGSGGGGSR
RANGEEGEGQQEEEEEEEEEEEEEEEEEEADKFPPDGKVLVRLRHVYDHD
AELYEEFSRELLSPLLRLVPSALSSLDAVRLSSRVVVSLRENCVACLVRK
EVVHDLAAALYRLLSKRDPLLKAEAFRVAEIVLA
back to top