prot_Ecto-sp6_S_contig102.837.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig102.837.1
Unique Name	prot_Ecto-sp6_S_contig102.837.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	563

Homology

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BLAST of mRNA_Ecto-sp6_S_contig102.837.1 vs. uniprot
Match: D7FZ78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ78_ECTSI)

HSP 1 Score: 519 bits (1337), Expect = 2.060e-178
Identity = 395/445 (88.76%), Postives = 396/445 (88.99%), Query Frame = 0

Query:  126 MRDHARNTHPAVRQAKLLRYVVGPWARRNAAAAAAAGA--------VGEGVDGVGGDRHPGVNAGKTGXXXXXXXXXXXXXXXXXXXXXXXXPDGTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFSQLEVLCQPLHLFLCDARIGNSNNGGVGSSGTSDRYSDAAIGSGTVVNRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNGGPRARWCEVRQFLEALCRAGEVDDECTGAALAVLEREGRFCTSSSCPVSAPAPAPSSHHAXXXXXXXXXXXXXXXXXFWRSPPPEVDLNFRRFTAAVRAILLFEGFYREARQAFVEVAGRVDGTVSLDKLLARLFPLDRSGTRSGASSRGQNDEEGGDSATGWRGGAVRETIRSRLDVGRKGETKVRLSTLTDCVLSSSFHPL 562
            MRDHARNTHPAVRQAKLLRYVVGPWARRNAAAA             VGEGVDGVGGDRHPGVNAGKTG                        PDGTK XXXXXXXXXXXXXXXXXXXXXXXXXXXXX FF QLEVLCQPLHLFLCDARIGNSNNG VGSSGT DRYSDAAIGSGTVVNRTG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNGGPRARWCEVRQFLEALCRAGEVDDECTGAALAVLEREGRFC SSSCPVSAPAPAPSSHHA XXXXXXXXXXXXX   FWRSP PEVD+NFRRFTAAVRAILLFEGFYREARQAFVEVAGRVDGTVSLDKLLARLFPLDRSGTRSGASSRGQNDEEGGDSATGWRGGAVRETIRSRLDVGRKGETKVRLSTLTDCVLSSSFHPL
Sbjct:    1 MRDHARNTHPAVRQAKLLRYVVGPWARRNAAAAXXXXXXXXXXXXXVGEGVDGVGGDRHPGVNAGKTGGGGSGSNNVDPNTMNGGT------PDGTKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-FFCQLEVLCQPLHLFLCDARIGNSNNGRVGSSGTRDRYSDAAIGSGTVVNRTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNGGPRARWCEVRQFLEALCRAGEVDDECTGAALAVLEREGRFCASSSCPVSAPAPAPSSHHAVXXXXXXXXXXXXXKGGFWRSPAPEVDVNFRRFTAAVRAILLFEGFYREARQAFVEVAGRVDGTVSLDKLLARLFPLDRSGTRSGASSRGQNDEEGGDSATGWRGGAVRETIRSRLDVGRKGETKVRLSTLTDCVLSSSFHPL 438

[Close]

BLAST of mRNA_Ecto-sp6_S_contig102.837.1 vs. uniprot
Match: A0A6H5K3L3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3L3_9PHAE)

HSP 1 Score: 510 bits (1314), Expect = 3.240e-173
Identity = 416/549 (75.77%), Postives = 423/549 (77.05%), Query Frame = 0

Query:    1 MGDDRSRRDDLGSDQNHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTETVQQLXXXXXXXXXXEERLLALRNLPPEEYLQQTGVSGAMDEALGVVAALRPANPLNLFSDIMRDHARNTHPAVRQAKLLRYVVGPWARRNAAAAAAAGA----VGEGVDGVGGDRHPGVNAGKTGXXXXXXXXXXXXXXXXXXXXXXXXPDGTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFSQLEVLCQPLHLFLCDARIGNSNNGGVGSSGTSDRYSDAAIGSGTVVNRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRNGGPRARWCEVRQFLEALCRAGEVDDECTGAALAVLEREGRFCTSSSCPVSAPAPAPSSHHAXXXXXXXXXXXXXXXXXFWRSPPPEVDLNFRRFTAAVRAILLFEGFYREARQAFVEVAGRVDGTVSLDKLLARLFPLDRSGTRSGASSRGQNDEEGGDSATGWRGGAVRETIRSRLDVGRKGETKV 545
            MGDD+  RD+ GSDQNHQ        XXXXXXXXXXXXXXXXXXXXXXXXX         VTETVQQL XXXXXXXXX ERLLALRNLPPEEYLQQTGVSGAMDEALGVV ALRPA+PL LFSDIMRDHARN HPAVRQAKLLRYVVGPWARRNAAAA         VGEGVDGVGGDR PG NAG         XXXXXXX            DGTK      XXXXXXXXXXXXXXXXXXXXXXXX FFSQLEVLCQPLHLFLCDAR GNSNNGGVGSSG  DRYSDAAIGSGTVVNRTG   XXXXXXXXXXXXXXX        XXXXXXXXXXXXXX X X       XXXXXX  NGG RARWCE      ALCRA EVDDECTGAALAVLEREGRFC SSS P S      SSHHA                 FWRSPP EVD++FR+FTAAVRAILLFEGFYREARQAFVEVAGRVDGTVSLDKLLARLFPL RSGTRSGAS RGQND+EGGDSATGWRGGAVRETIRSRLDVGRKGETKV
Sbjct:   23 MGDDQGHRDEHGSDQNHQHQEKDWGDXXXXXXXXXXXXXXXXXXXXXXXXXLQVL-----VTETVQQLEXXXXXXXXXXERLLALRNLPPEEYLQQTGVSGAMDEALGVVVALRPASPLGLFSDIMRDHARNAHPAVRQAKLLRYVVGPWARRNAAAAXXXXXXXXXVGEGVDGVGGDRCPGTNAGNX-------XXXXXXXNVDPNTTNRGTADGTKDNRKHPXXXXXXXXXXXXXXXXXXXXXXXXRFFSQLEVLCQPLHLFLCDARNGNSNNGGVGSSGMRDRYSDAAIGSGTVVNRTGGAGXXXXXXXXXXXXXXXRPRGAAKGXXXXXXXXXXXXXXSXTXRGPTGGHXXXXXXXXNGGARARWCE------ALCRAAEVDDECTGAALAVLEREGRFCASSSSPASXXXXXXSSHHAVMMATAAPISEGWGRGGFWRSPPSEVDVDFRQFTAAVRAILLFEGFYREARQAFVEVAGRVDGTVSLDKLLARLFPLHRSGTRSGAS-RGQNDDEGGDSATGWRGGAVRETIRSRLDVGRKGETKV 552

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig102.837.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig102.837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FZ78_ECTSI	2.060e-178	88.76	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K3L3_9PHAE	3.240e-173	75.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 65..85
None	No IPR available	COILS	Coil	Coil	coord: 28..63

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig102	contig	Ecto-sp6_S_contig102:121432..127474 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig102.837.1	mRNA_Ecto-sp6_S_contig102.837.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig102 121432..127474 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig102.837.1 ID=prot_Ecto-sp6_S_contig102.837.1|Name=mRNA_Ecto-sp6_S_contig102.837.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=563bp
MGDDRSRRDDLGSDQNHQHQEQDEGDDEEQQEQEEQEQEEEGEDEEEEEE
EQQRQQLQVLVTETVQQLERERLEEEEREERLLALRNLPPEEYLQQTGVS
GAMDEALGVVAALRPANPLNLFSDIMRDHARNTHPAVRQAKLLRYVVGPW
ARRNAAAAAAAGAVGEGVDGVGGDRHPGVNAGKTGGGGGGGGGGGGSNNV
DPNTTNSGTPDGTKHSHNHPPPPRSTKRTTTTTTNAAVVVDHHRRFFSQL
EVLCQPLHLFLCDARIGNSNNGGVGSSGTSDRYSDAAIGSGTVVNRTGGA
GGGGSATSKAGSGSGGRPRGAAKGTTGGGGGSAGGRATSGRGRGAAGGHG
TGGRGSRNGGPRARWCEVRQFLEALCRAGEVDDECTGAALAVLEREGRFC
TSSSCPVSAPAPAPSSHHAVMVAAAAPISGGGGKGGFWRSPPPEVDLNFR
RFTAAVRAILLFEGFYREARQAFVEVAGRVDGTVSLDKLLARLFPLDRSG
TRSGASSRGQNDEEGGDSATGWRGGAVRETIRSRLDVGRKGETKVRLSTL
TDCVLSSSFHPL*