prot_Ecto-sp6_S_contig102.836.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig102.836.1
Unique Nameprot_Ecto-sp6_S_contig102.836.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length182
Homology
BLAST of mRNA_Ecto-sp6_S_contig102.836.1 vs. uniprot
Match: D7FZ79_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ79_ECTSI)

HSP 1 Score: 360 bits (925), Expect = 5.300e-126
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
Query:    1 MSASSNFLIPAMKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGEVGIVQAVIRKQNRIIVEGVNMRKYSKKPEGGGRGTTVTREAAIHVTNVNLVCPETGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILTVRRKPRSNLTGPKDTVKEDVEEITFRGLDENGYENP 180
            MSASSNFLIPAMKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGEVGIVQAVIRKQNRIIVEGVNMRKYSKKPEGGGRGTTVTREAAIHVTNVNLVCPETGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILTVRRKPRSNLTGPKDTVKEDVEEITFRGLDENGYENP
Sbjct:    1 MSASSNFLIPAMKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGEVGIVQAVIRKQNRIIVEGVNMRKYSKKPEGGGRGTTVTREAAIHVTNVNLVCPETGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILTVRRKPRSNLTGPKDTVKEDVEEITFRGLDENGYENP 180          
BLAST of mRNA_Ecto-sp6_S_contig102.836.1 vs. uniprot
Match: A0A835Z5A5_9STRA (Translation protein SH3-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5A5_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.270e-50
Identity = 85/177 (48.02%), Postives = 121/177 (68.36%), Query Frame = 0
Query:    2 SASSNFLIPAMKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGEVGIVQAVIRKQNRIIVEGVNMRKYSKKPEGGGRGTTVTREAAIHVTNVNLVCPETGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILTVRRKPRSNLTGPKDTVKEDVEEITFRGLDENGYE 178
            S +S  L+ AMK+L +P ++ +P L PKNI+   KW I+RGD V +V G    + G+V+ VIRK+NR+IVEG+N+++ +     G     V+R   +HV+ V LVCPETG PT+ + ++LEDGTRVRVA  SGA+IPRPE+L  RR+ ++ + GPKDT  E    +TF+G+DE G E
Sbjct:    6 STASRGLLKAMKKLQEPRKRYQPSLDPKNILSPEKWLIVRGDLVQMVTGADKNKQGVVREVIRKENRLIVEGLNVQQVTLPERDGQAERVVSRPQPVHVSAVALVCPETGRPTRAARRYLEDGTRVRVAALSGAIIPRPEVLLQRRRAKNLIVGPKDTEAEAAHAVTFKGVDELGNE 182          
BLAST of mRNA_Ecto-sp6_S_contig102.836.1 vs. uniprot
Match: A0A7S2UWK4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWK4_9STRA)

HSP 1 Score: 151 bits (381), Expect = 3.740e-43
Identity = 76/170 (44.71%), Postives = 111/170 (65.29%), Query Frame = 0
Query:   12 MKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGEVGIVQAVIRKQNRIIVEGVNMRKYSKKPEGGGRGTT---VTREAAIHVTNVNLVCPETGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILTVRRKPRSNLTGPKDTVKEDVEEITFRGLDENGYE 178
            M+   K  Q +   L P+ +IP   W I  GDKV V++G   G+ G+V+ + R +N ++VEG+N +K+    E    G     V REAA+H + +NLV P TG PT+V +++LEDG RVR++K+SGAVIP+PE L +R+KPR   TGP+DT  +DV ++TFRG+  +G E
Sbjct:    5 MRYYEKGAQAMLQRLQPRAVIPIKNWNIFTGDKVAVISGKEEGKQGVVRRIRRTRNSVVVEGINFQKFPGSLEDAAPGKAPEDVYREAALHYSQLNLVDPITGEPTRVMWRYLEDGARVRISKKSGAVIPKPEGLGLRKKPRKTATGPRDTPPDDVLQVTFRGIGADGRE 174          
BLAST of mRNA_Ecto-sp6_S_contig102.836.1 vs. uniprot
Match: A0A7S1C4Y4_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4Y4_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.270e-41
Identity = 74/141 (52.48%), Postives = 96/141 (68.09%), Query Frame = 0
Query:   33 PKNKWTILRGDKVHVVNGHHTGEVGIVQAVIRKQNRIIVEGVNMRKYSKKPEGGGRGTTVTREAAIHVTNVNLVCPETGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILTVRRKPRSNLTGPKDTVKEDVEEITFRGLD 173
            P  KW I+RGD V VV+G   G+ G+V+ V+RKQNRI+VEGVNM +   + +G   G   + EAA+HV+NVNLV P +G PT+V+ + +EDG+RVRVAKRSGA+IPRPE+L  R  PR    GPKDT   +    TF   D
Sbjct:   25 PLGKWRIVRGDTVEVVSGRDRGKQGVVKRVLRKQNRIVVEGVNMVRKHVRADGQNAGGIFSVEAALHVSNVNLVDPVSGKPTRVAIREMEDGSRVRVAKRSGAIIPRPELLKARTTPRRASVGPKDTEAAEAHRRTFADED 165          
BLAST of mRNA_Ecto-sp6_S_contig102.836.1 vs. uniprot
Match: A0A8J2X1P5_9STRA (50S ribosomal protein L24, chloroplastic n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X1P5_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.070e-41
Identity = 82/156 (52.56%), Postives = 102/156 (65.38%), Query Frame = 0
Query:   35 NKWTILRGDKVHVVNGHHTGEVGIVQAVIRKQNRIIVEGVNMRK---YSKKPEGGGRGTTVTREAAIHVTNVNLVCPETGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILTVRRKPRSNLTGPKDTVKEDVEEITF-----------RGLDENG 176
            N+W ILRGDKV VVNG H G+ GIVQ V+R  NR+IVE VN+     YSK  E   + T      +IH +NVNLVCP T  PT+V+ +FL+DGTRVRVA RSGA+I +P ILT R KPRS   GP+DT ++ V E+T+           R LDE+G
Sbjct:   35 NRWNILRGDKVVVVNGRHRGQSGIVQKVLRSTNRLIVEDVNVGDRMLYSKGDEDKVK-TPTKAPRSIHYSNVNLVCPVTNLPTRVARRFLDDGTRVRVAVRSGAIIEKPAILTERHKPRSTQAGPRDTPEDHVLEVTYDPVVDAEQWRRRELDEDG 189          
BLAST of mRNA_Ecto-sp6_S_contig102.836.1 vs. uniprot
Match: A9NV55_PICSI (KOW domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NV55_PICSI)

HSP 1 Score: 140 bits (354), Expect = 1.900e-39
Identity = 72/136 (52.94%), Postives = 94/136 (69.12%), Query Frame = 0
Query:   37 WTILRGDKVHVVNGHHTGEVGIVQAVIRKQNRIIVEGVNMRKYSKKPEGGGRGTTVTREAAIHVTNVNLVCPETGFPTKVSYKFLEDGTRVRVAK---RSGAVIPRPEILTVRRKPRSNLTGPKDTVKEDVEEITF 169
            W ILRGD V +  G   G+ G+++ VIR QNR+IVEG N+ K   +   G  G   T EA +HV+NV ++ P TG P K+ YKFLEDG++VRV++    SG++IPRPEIL VR KPR N+ GPKDTV+EDV E T+
Sbjct:   13 WKILRGDNVMINAGKDKGQTGVIKRVIRSQNRVIVEGKNLVKKHVRRGEGHEGGIFTVEAPLHVSNVQVLDPVTGAPCKIGYKFLEDGSKVRVSRGQAASGSIIPRPEILKVRTKPRINVVGPKDTVEEDVLERTY 148          
BLAST of mRNA_Ecto-sp6_S_contig102.836.1 vs. uniprot
Match: F0XVF8_AURAN (50S ribosomal protein L24, chloroplastic (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVF8_AURAN)

HSP 1 Score: 135 bits (341), Expect = 9.910e-38
Identity = 71/136 (52.21%), Postives = 93/136 (68.38%), Query Frame = 0
Query:   37 WTILRGDKVHVVNGHHTGEVGIVQAVIRKQNRIIVEGVNMRKYSKKPEGGGRGTTVTREA--AIHVTNVNLVCPETGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILTVRRKPRS-NLTGPKDTVKEDVEEITF 169
            W+I+RGDKV VVNG H G+ G+VQ V+R+ NR+IVEGVN+R       G      V   A  ++H +NVNLVCP T  PT+V+ +FL+DGTRVRVA RSGA+I  PE+L  R  PR+  + GPKDT + DV  +T+
Sbjct:    1 WSIVRGDKVVVVNGRHRGQSGVVQHVLRQSNRLIVEGVNVRDRMLYAPGDEEKVKVKTAAPCSVHYSNVNLVCPVTSLPTRVARRFLDDGTRVRVAVRSGAIIELPEVLKERHTPRTPGVPGPKDTDEADVLAVTY 136          
BLAST of mRNA_Ecto-sp6_S_contig102.836.1 vs. uniprot
Match: A0A843X4B8_COLES (KOW domain-containing protein n=6 Tax=Mesangiospermae TaxID=1437183 RepID=A0A843X4B8_COLES)

HSP 1 Score: 135 bits (340), Expect = 2.480e-37
Identity = 69/144 (47.92%), Postives = 93/144 (64.58%), Query Frame = 0
Query:   36 KWTILRGDKVHVVNGHHTGEVGIVQAVIRKQNRIIVEGVNMRKYSKKPEGGGRGTTVTREAAIHVTNVNLVCPETGFPTKVSYKFLEDGTRVRVAK---RSGAVIPRPEILTVRRKPRSNLTGPKDTVKEDVEEITFRGLDENG 176
            KW ILRGD V ++ G   GE GI++ V+R QNR+IVEG N+ K   K   G  G   T EA +HV+NV ++ P+TG P K+  ++LEDGT+VR+++    SG++IPRPEIL +R  PR N+ GPKDT    V E T+     NG
Sbjct:   12 KWKILRGDNVMIIRGKDKGETGIIKRVVRSQNRVIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPQTGKPCKIGIRYLEDGTKVRISRGIGASGSIIPRPEILKIRTTPRPNIIGPKDTPMNLVLEKTYDAKTGNG 155          
BLAST of mRNA_Ecto-sp6_S_contig102.836.1 vs. uniprot
Match: A0A4S8JSD8_MUSBA (KOW domain-containing protein n=5 Tax=commelinids TaxID=4734 RepID=A0A4S8JSD8_MUSBA)

HSP 1 Score: 134 bits (338), Expect = 4.970e-37
Identity = 70/136 (51.47%), Postives = 91/136 (66.91%), Query Frame = 0
Query:   37 WTILRGDKVHVVNGHHTGEVGIVQAVIRKQNRIIVEGVNMRKYSKKPEGGGRGTTVTREAAIHVTNVNLVCPETGFPTKVSYKFLEDGTRVRVAK---RSGAVIPRPEILTVRRKPRSNLTGPKDTVKEDVEEITF 169
            W ILRGD V ++ G   GE GI++ VIR QNR+IVEG N+ K   K   G  G   + E+ +HV+NV ++ P TG P K+ YK+LEDG++VRV++    SG VIPRPEIL  RRKPR N+ GPKDT  + V E T+
Sbjct:   13 WKILRGDNVMIIRGKDKGETGIIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFSIESPLHVSNVQVLDPATGKPCKIGYKYLEDGSKVRVSRGLAASGTVIPRPEILKERRKPRPNIVGPKDTPIDLVLEKTY 148          
BLAST of mRNA_Ecto-sp6_S_contig102.836.1 vs. uniprot
Match: A0A7S3V6A7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6A7_9STRA)

HSP 1 Score: 135 bits (340), Expect = 5.290e-37
Identity = 78/180 (43.33%), Postives = 111/180 (61.67%), Query Frame = 0
Query:    1 MSASSNFLIPAMKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHT--GEVGIVQAVIRKQNRIIVEGVNM--RKYSKKPEGGGRGTTVTREAAIHVTNVNLVCPETGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILTVRRKPRSNLTGPKDTVKED-VEEITFRGLDEN 175
            M+  +  +   MKR      ++KP +  K    K KW ILRGD V V+   H   G+ G+V  V R+++R+I+EGVN   ++    P+ G  G T+ +E +IH +NVNLV P +G PT+VS K LEDG++VRVAK+SGA+IPRPEIL  RR+P+S  +   DT   D V E T+  + E+
Sbjct:    1 MATRAKIMNSIMKRTFPKRTEIKPAM--KEAAKKTKWNILRGDTVQVIERKHPEFGKQGVVTVVDRRRDRVIIEGVNTGPKRQKANPDRGLAGRTIMKERSIHYSNVNLVDPVSGLPTRVSRKTLEDGSKVRVAKKSGAIIPRPEILKERRRPKSIASTVSDTSDADLVWETTYSSIPES 178          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.836.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ79_ECTSI5.300e-126100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z5A5_9STRA1.270e-5048.02Translation protein SH3-like domain-containing pro... [more]
A0A7S2UWK4_9STRA3.740e-4344.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1C4Y4_9STRA2.270e-4152.4850S ribosomal protein L24, chloroplastic n=1 Tax=B... [more]
A0A8J2X1P5_9STRA3.070e-4152.5650S ribosomal protein L24, chloroplastic n=1 Tax=P... [more]
A9NV55_PICSI1.900e-3952.94KOW domain-containing protein n=1 Tax=Picea sitche... [more]
F0XVF8_AURAN9.910e-3852.2150S ribosomal protein L24, chloroplastic (Fragment... [more]
A0A843X4B8_COLES2.480e-3747.92KOW domain-containing protein n=6 Tax=Mesangiosper... [more]
A0A4S8JSD8_MUSBA4.970e-3751.47KOW domain-containing protein n=5 Tax=commelinids ... [more]
A0A7S3V6A7_9STRA5.290e-3743.33Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003256Ribosomal protein L24TIGRFAMTIGR01079TIGR01079coord: 39..137
e-value: 8.8E-27
score: 91.6
IPR003256Ribosomal protein L24PFAMPF17136ribosomal_L24coord: 74..137
e-value: 2.3E-20
score: 72.7
IPR003256Ribosomal protein L24PANTHERPTHR12903MITOCHONDRIAL RIBOSOMAL PROTEIN L24coord: 27..169
IPR003256Ribosomal protein L24HAMAPMF_01326_BRibosomal_L24_Bcoord: 37..131
score: 15.335
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 30..135
e-value: 1.2E-30
score: 107.9
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 31..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig102contigEcto-sp6_S_contig102:114030..119758 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig102.836.1mRNA_Ecto-sp6_S_contig102.836.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig102 114030..121136 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig102.836.1 ID=prot_Ecto-sp6_S_contig102.836.1|Name=mRNA_Ecto-sp6_S_contig102.836.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=182bp
MSASSNFLIPAMKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNG
HHTGEVGIVQAVIRKQNRIIVEGVNMRKYSKKPEGGGRGTTVTREAAIHV
TNVNLVCPETGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILTVRRKPR
SNLTGPKDTVKEDVEEITFRGLDENGYENPP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003256Ribosomal_L24
IPR014722Rib_L2_dom2
IPR008991Translation_prot_SH3-like_sf