mRNA_Ecto-sp6_S_contig102.830.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig102.830.1
Unique NamemRNA_Ecto-sp6_S_contig102.830.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig102.830.1 vs. uniprot
Match: D7FZ85_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ85_ECTSI)

HSP 1 Score: 649 bits (1675), Expect = 2.460e-235
Identity = 328/331 (99.09%), Postives = 329/331 (99.40%), Query Frame = 1
Query:    1 MAEPAAAAAGTTEGEPGPGYTRVDIPFVIDRILVTDAELIRKIADHPDVDRVHGVPTKERPWWINAYFPATRFIDRQDEMFVPLTSTSDPNYEHRRTYVEEMVKDGVAEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGQDIPADIVEHSSKTANTIGDALSSGYFPTLRHQGKVMDFIEQNNELHQGCPVADFSHHIGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQGDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAAETKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTELARLEAADAAEGAAATDTSQTG 993
            MAEPAAAAAGTTEGE GPGYTRVDIPFVIDRILVTDAELIRKIADHPDVDRVHGVPTKERPWWINAYFPATRFIDRQDEMFVPLTSTSDPNYEHRRTYVEEMVKDGVAEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGQDIPADIVEHSSKTANTIGDALSSGYFPTLRHQGKVMDFIEQNNELHQGCPVADFSHHIGAAAQLLTPSCQFL+KEKDRSRAILDIFTQ GDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAAETKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTELARLEAADAAEGAAATDTSQTG
Sbjct:    1 MAEPAAAAAGTTEGETGPGYTRVDIPFVIDRILVTDAELIRKIADHPDVDRVHGVPTKERPWWINAYFPATRFIDRQDEMFVPLTSTSDPNYEHRRTYVEEMVKDGVAEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGQDIPADIVEHSSKTANTIGDALSSGYFPTLRHQGKVMDFIEQNNELHQGCPVADFSHHIGAAAQLLTPSCQFLYKEKDRSRAILDIFTQ-GDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAAETKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTELARLEAADAAEGAAATDTSQTG 330          
BLAST of mRNA_Ecto-sp6_S_contig102.830.1 vs. uniprot
Match: A0A355DRG2_9CYAN (Uncharacterized protein n=1 Tax=Cyanobacteria bacterium UBA11162 TaxID=2055781 RepID=A0A355DRG2_9CYAN)

HSP 1 Score: 209 bits (531), Expect = 3.940e-62
Identity = 123/301 (40.86%), Postives = 168/301 (55.81%), Query Frame = 1
Query:   34 TEGEPGPGYTRVDIPFVIDRILVTDAELIRKIADHPDVDRVHGVPTKERPWWINAYFPATRFID-RQDEMFVPLTSTSDPNYEHRRTYVEEMVKDGVAEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGQDIPADIVEHSSKTANTIGDALSSGYFPTLRH-QGKVMDFIEQNNELHQGCPVADFSHHIGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQGDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAAETKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTEL 930
            TE  P P   R++IPF+ID ILV++ E I+KI    DVDR+H   TK  PWW+  YF AT+F D  +D  F PL S S+P Y  RR Y+EE V +  ++EDVK+IA L+ T A  + L   +V  VNRRFFG++IP  I + S+ T N   DA+    +   R  Q ++M++ E +  L +   + D  H+IG   Q    S + L    D+   + +IFT     P     PRIAIK S   GLL  P     T+ I N+ +AAA+T+D  F+FG+G   R C F+  F   M DLQ EL
Sbjct:    5 TESAPKP--VRINIPFLIDVILVSEPEQIKKIETSDDVDRLHAYETKSLPWWVKFYFRATKFHDDERDLWFCPLESASNPTYRPRRAYLEEKVAESYSQEDVKRIAELLKTNASDEVLTHEMVQVVNRRFFGKEIPLSITKASNDTLNNFIDAIFPWKYKRAREAQKEIMNYCEHH--LAKNVHILDIGHNIGEVVQATAGSLKILKDNLDKP--VEEIFTTHAPTPQV---PRIAIKSSNFDGLLSSPTTPGKTVLIFNVGKAAAKTRDLFFSFGSGSPDRACVFKDFFIAFMTDLQKEL 296          
BLAST of mRNA_Ecto-sp6_S_contig102.830.1 vs. uniprot
Match: UPI0016862D4D (hypothetical protein n=1 Tax=Calothrix membranacea TaxID=212352 RepID=UPI0016862D4D)

HSP 1 Score: 201 bits (512), Expect = 2.680e-59
Identity = 121/292 (41.44%), Postives = 163/292 (55.82%), Query Frame = 1
Query:   64 RVDIPFVIDRILVTDAELIRKIADHPDVDRVHGVPTKERPWWINAYFPATRFIDRQDEM-FVPLTSTSDPNYEHRRTYVEEMVKDGVAEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGQDIPADIVEHSSKTANTIGDA-LSSGYFPTLRHQGKVMDFIEQNNELHQGCPVADFSHHIGAAAQLLTPSCQFLHKEKDR-SRAILDIFTQQGDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAAETKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTEL 930
            R++IP ++D I+V+D   IR I    DVDR+H   T   PWW+  YF +T+F D+Q ++ F P  S+++P Y  RR Y+EE V     +EDVKKIA L+ T A  + L  A+V  VNRRFFGQDIPA+I   +  T     +A L   Y    + Q K+MD+ E +  L QG  + D  H+IG   Q    S   L K KD   + I  IFT     P     PRIA+K ST  G+L  P     T+ +  I +AAA+T+D  FTFG G  +R+C F+  F + M DLQ EL
Sbjct:   11 RINIPLLLDIIIVSDPAQIRLIETSGDVDRLHTYDTASLPWWVKLYFSSTKFHDQQRDLWFCPFESSTNPTYHPRRAYLEEKVAISYQQEDVKKIADLLRTDASDEVLADAMVQIVNRRFFGQDIPAEISHTAKYTVQKFTEAILPWKYIKGQKSQEKIMDYCEHS--LPQGVHILDVGHNIGEVVQATAGS---LKKLKDNIDQPIEQIFTTYAPTPQV---PRIAVKSSTFNGMLSSPTTPGKTVLLFMIGKAAAKTRDLAFTFGTGSSERECVFKDFFLQFMTDLQQEL 294          
BLAST of mRNA_Ecto-sp6_S_contig102.830.1 vs. uniprot
Match: A0A846CFV2_9CYAN (Uncharacterized protein n=10 Tax=Okeania TaxID=1458928 RepID=A0A846CFV2_9CYAN)

HSP 1 Score: 200 bits (509), Expect = 8.710e-59
Identity = 116/293 (39.59%), Postives = 168/293 (57.34%), Query Frame = 1
Query:   64 RVDIPFVIDRILVTDAELIRKIADHPDVDRVHGVPTKERPWWINAYFPATRFIDRQDEM-FVPLTSTSDPNYEHRRTYVEEMVKDGVAEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGQDIPADIVEHSSKTANTIGDA-LSSGYFPTLRHQGKVMDFIEQN--NELHQGCPVADFSHHIGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQGDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAAETKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTEL 930
            RV IPF++D I+++D+E I+KI    DVDR+H   T   PWW   YF AT+F DR+ ++ F P  STS+P Y+ RR Y+EE V    +E DVK+IA L++     + L   +V  VN+RFF ++IP  I + +  T  ++G+A L   Y    + Q ++M++  +N  N++H    + D  H+IG   Q  T   + L    D+S  + +IFT     P+T   PRIA+K+S   GLL  P     T+FIL I +AA ET+D  FTF  G  +R C F+  F + M DLQ EL
Sbjct:   11 RVKIPFLLDIIIISDSEQIKKIETSGDVDRLHTYDTASLPWWAKIYFRATKFHDRERDLWFCPFESTSNPTYQQRRAYLEEKVAKSYSEADVKRIAELLNKNTEDEVLAYEMVQIVNQRFFEKEIPLPITKTAKNTVQSLGEAILPWKYIAGRKAQNQLMNYCAKNLPNDVH----ILDVGHNIGEVVQATTGGLRTLKNNLDKS--VEEIFTSN---PLTPQAPRIAVKESNFDGLLSSPTIPGKTVFILKIGKAAIETQDINFTFSTGSSERACVFKDFFLEFMKDLQQEL 294          
BLAST of mRNA_Ecto-sp6_S_contig102.830.1 vs. uniprot
Match: A0A1Z4N8I7_9CYAN (Uncharacterized protein n=3 Tax=Nostocales TaxID=1161 RepID=A0A1Z4N8I7_9CYAN)

HSP 1 Score: 197 bits (500), Expect = 1.670e-57
Identity = 118/291 (40.55%), Postives = 163/291 (56.01%), Query Frame = 1
Query:   64 RVDIPFVIDRILVTDAELIRKIADHPDVDRVHGVPTKERPWWINAYFPATRFIDRQDEM-FVPLTSTSDPNYEHRRTYVEEMVKDGVAEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGQDIPADIVEHSSKTANTIGDA-LSSGYFPTLRHQGKVMDFIEQNNELHQGCPVADFSHHIGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQGDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAAETKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTEL 930
            R+ IP ++D I+V+D E I+ I    DVDR+H   T   PWW+  YF +T+F D+Q ++ F P  S+++P Y  RR Y+EE V     +EDVKKIA L+ + A  + L   +V  VNRRFF QDIPA+I   +  T   + +A L   Y    + Q KVMD+ E +  L Q   + D  H+IG   Q  + S + L    D+   I  IFT       T   PRIA+K ST  G+L  P  A  T+ +  I +AAA+T+D  FTFG G  +R+C F+  F + MADLQ EL
Sbjct:   11 RIKIPLLLDVIIVSDPEQIKLIETSGDVDRLHTYDTASLPWWVKLYFSSTKFHDQQRDLWFCPFESSNNPTYHPRRAYLEEKVAISYQQEDVKKIADLLKSNASDEVLADTMVQIVNRRFFDQDIPAEISHTAKYTVQDLKEAILPWKYIKGQKSQQKVMDYCEHS--LPQNVHILDVGHNIGEVVQSTSVSLRQLKDNLDQP--IEQIFTTYAP---TRQVPRIAVKSSTFDGMLSSPTNAGKTVLLFMIAKAAAKTRDIAFTFGTGSSERECVFKDFFLQFMADLQQEL 294          
BLAST of mRNA_Ecto-sp6_S_contig102.830.1 vs. uniprot
Match: A0A6L9ZSK1_9CYAN (Uncharacterized protein n=2 Tax=unclassified Okeania TaxID=2634635 RepID=A0A6L9ZSK1_9CYAN)

HSP 1 Score: 197 bits (500), Expect = 1.880e-57
Identity = 117/292 (40.07%), Postives = 166/292 (56.85%), Query Frame = 1
Query:   64 RVDIPFVIDRILVTDAELIRKIADHPDVDRVHGVPTKERPWWINAYFPATRFID-RQDEMFVPLTSTSDPNYEHRRTYVEEMVKDGVAEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGQDIPADIVEHSSKTANTIGDA-LSSGYFPTLRHQGKVMDFIEQNNELHQGCPVADFSHH-IGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQGDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAAETKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTEL 930
            RV IPF++D I+++D+E I+KI    +VDR+H   T   PWW   YF ATRF D ++D  F  L STS+P+YE RR Y+EE V  G +E DVK+IA L++  A  + L   +V  VN RFF ++IP+ I + +  T  +IG+A L   Y    +   +V+D+  +N  L     + D  HH IG   +  T + + L    D+S  + +IFT     P+T   PRIA+K+S   GLL  P     T+F+  I +AA ET+D  FTF  G  +R C F+  F + M DLQ EL
Sbjct:   11 RVKIPFLLDIIIISDSEQIKKIETSGNVDRLHTYDTASLPWWAKIYFRATRFHDSKRDLWFCALESTSNPSYEQRRAYLEEKVATGYSEADVKRIAELLNKNAEDEVLAYEMVQIVNHRFFEKEIPSTITKAAENTLQSIGEAILPWKYIAATKAHSQVIDYCAEN--LPDNVHIIDAGHHNIGEVVKTTTGALRTLKNNLDKS--VEEIFTSN---PLTPQAPRIAVKESNFDGLLSSPTIPGKTVFLFKIGKAAIETQDINFTFSTGSSERACVFKDFFLEFMKDLQQEL 295          
BLAST of mRNA_Ecto-sp6_S_contig102.830.1 vs. uniprot
Match: A0A351L9G3_9CYAN (Uncharacterized protein n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A351L9G3_9CYAN)

HSP 1 Score: 196 bits (498), Expect = 3.730e-57
Identity = 117/297 (39.39%), Postives = 168/297 (56.57%), Query Frame = 1
Query:   64 RVDIPFVIDRILVTDAELIRKIADHPDVDRVHGVPTKERPWWINAYFPATRFID-RQDEMFVPLTSTSDPNYEHRRTYVEEMVKDGVAEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGQDIPADIVEHSSKTANTIGDA-LSSGYFPTLRHQGKVMDFIEQNNELHQGCPVADFSHHIGAAAQLLTPSCQFLHKEKDR-SRAILDIFTQQGDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAAETKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTELARLEA 945
            R+ IPF++D I+V+D E I+KI    DVDR+H   T   P W+  YF +T+F D ++D  F P  ST++P Y+ RR Y+EE V    ++EDVK IA L+   A  + L  A+V  VN+RFFG++IP  I + ++ T   I +A L   Y   ++ Q ++M + E +  L +   + D  H+IG   Q        L K KD   + + +IFT+    P+T   PRIAIK ST  G+L  P     T+ ++ I +AAA+T D  FTFGAG  +R C F+  F   M DLQ EL R+ A
Sbjct:   13 RIKIPFLLDIIIVSDPEQIKKIESSGDVDRLHAYDTASLPGWVKFYFRSTKFHDDKRDLWFCPFESTANPTYQPRRAYLEEKVATSYSQEDVKTIAELLINNASDEVLAHAMVQVVNQRFFGEEIPLHITKTANHTVQKITEAILPWKYMRGIKAQQEIMSYCEHH--LAKDVHILDVGHNIGEVVQATAGG---LRKLKDNLDKPVEEIFTEH---PLTPQAPRIAIKSSTFDGMLSSPTTPGKTVVLMQIGKAAAKTHDIFFTFGAGSSERACVFKDFFLAFMKDLQKELQRIAA 301          
BLAST of mRNA_Ecto-sp6_S_contig102.830.1 vs. uniprot
Match: UPI00139143D8 (hypothetical protein n=1 Tax=Nostoc sp. B(2019) TaxID=2690446 RepID=UPI00139143D8)

HSP 1 Score: 196 bits (498), Expect = 3.730e-57
Identity = 114/291 (39.18%), Postives = 159/291 (54.64%), Query Frame = 1
Query:   64 RVDIPFVIDRILVTDAELIRKIADHPDVDRVHGVPTKERPWWINAYFPATRFID-RQDEMFVPLTSTSDPNYEHRRTYVEEMVKDGVAEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGQDIPADIVEHSSKTANTIGDALSSG-YFPTLRHQGKVMDFIEQNNELHQGCPVADFSHHIGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQGDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAAETKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTEL 930
            R+ IP ++D I+V+D   IR I    DVDR+H   TK  PWW+  YFPAT+F D  +D  F P  S++DP Y  R+TY+EE V     +EDVKKIA L+   A  + L   +V  VNRRFFG+D+P +I + +  T     +A+    Y    + Q ++MD+ EQ   L  G  + D  H+IG   Q  + + + L +  D+   + +IFT     P     PRIAIK ST   +L  P     T+ +  I +AAA+T D  FTFG G  +R C F+  F + M DLQ EL
Sbjct:   12 RIKIPLLLDIIIVSDPVQIRLIETSGDVDRLHTYSTKSLPWWVKFYFPATKFHDDERDLWFCPFESSADPTYYPRKTYLEEKVAISYTQEDVKKIAELLRINASDEVLAYEMVQVVNRRFFGEDVPTEITDTAKYTVQKFSEAIFPWKYIRGRKSQKQIMDYCEQR--LTPGVHILDVGHNIGEVVQATSSALKSLKENLDQP--VEEIFTTHAPTPQV---PRIAIKSSTFDNMLSSPTTPGKTVVLFMIGKAAAKTHDIFFTFGTGSSERACVFKDFFLRFMNDLQHEL 295          
BLAST of mRNA_Ecto-sp6_S_contig102.830.1 vs. uniprot
Match: A0A0F5YFH2_9CYAN (Uncharacterized protein n=1 Tax=Limnoraphis robusta CS-951 TaxID=1637645 RepID=A0A0F5YFH2_9CYAN)

HSP 1 Score: 192 bits (488), Expect = 1.100e-55
Identity = 112/293 (38.23%), Postives = 164/293 (55.97%), Query Frame = 1
Query:   64 RVDIPFVIDRILVTDAELIRKIADHPDVDRVHGVPTKERPWWINAYFPATRFID-RQDEMFVPLTSTSDPNYEHRRTYVEEMVKDGVAEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGQDIPADIVEHSSKTANTIGDALS-SGYFPTLRHQGKVMDFIEQN--NELHQGCPVADFSHHIGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQGDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAAETKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTEL 930
            R++IP ++D ++VTD + I+ I     VDR+H   T   PWW+  Y  A+RF D R+D  F  L S S+P Y+ R  Y++E V  G + +DVKKIA L+      + +   +V  VNRRFFG++IP++I + +  T   I +A+    Y    +   +VMD+ EQN   ++H   P+    H+IG   +  T + Q L    D+   + +IFT     P+T+  PRIA + ST  GLL  PAK   T+FI  I +AA +T+D LFTF  G + R C F+  F + M DLQ EL
Sbjct:   13 RINIPLILDVVIVTDPDQIKTIETSGSVDRLHAYDTPSLPWWLRFYLRASRFHDDRRDLWFCALESKSNPTYQPRVNYLKEQVAKGYSSDDVKKIAQLLRNNDKDEVIAHEMVQIVNRRFFGKEIPSNITQAAKDTLQEISEAVQPQKYILARKSHQQVMDYCEQNLPKDVH---PIDAGHHNIGEIVKTTTRALQILKNNLDKP--VEEIFTAN---PLTLQAPRIATQASTFEGLLSSPAKPGKTVFIFKIGEAAIQTQDILFTFSTGSEDRVCVFKDFFLEFMTDLQQEL 297          
BLAST of mRNA_Ecto-sp6_S_contig102.830.1 vs. uniprot
Match: A0A1D2P8J3_9CYAN (Uncharacterized protein n=1 Tax=Scytonema millei VB511283 TaxID=1245923 RepID=A0A1D2P8J3_9CYAN)

HSP 1 Score: 192 bits (487), Expect = 1.600e-55
Identity = 116/293 (39.59%), Postives = 161/293 (54.95%), Query Frame = 1
Query:   64 RVDIPFVIDRILVTDAELIRKIADHPDVDRVHGVPTKERPWWINAYFPATRFID-RQDEMFVPLTSTSDPNYEHRRTYVEEMVKDGVAEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGQDIPADIVEHSSKTANTIGDALSSGYFPTLRH-QGKVMDFIEQ--NNELHQGCPVADFSHHIGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQGDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAAETKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTEL 930
            R++IPF++D ++V+D E IRKI     VDR+H   T   PWW+  +F AT+F D  +D  F P  STS PNYE RR Y+EE V  G   +DVK+IA L+ T A  + L  A+V  VNRRFFG++IP  I + +  T    G+A+    +   R  Q ++MD+  +  +N +H    + D  H+IG   Q    + + L  + +  + I +IFT     P     PRIA+K S   GLL  P     T+ IL + +AAA+T D  FTFG G   R C F+  F   M DLQ EL
Sbjct:   13 RINIPFLLDIVIVSDPEHIRKIETSGAVDRLHVYDTALLPWWVKFFFRATKFHDDERDLWFFPFESTSCPNYESRRAYLEEKVAIGYNRDDVKRIAELLKTNASDEVLAHAMVQVVNRRFFGEEIPLPITQAAKNTLQNFGEAIFPWKYKRARKSQKQIMDYCVKTVDNNVH----IVDVGHNIGEVVQATAVALRTL--KDNLEKPIEEIFTAYAPTPQV---PRIAVKASNFDGLLSSPITPGKTVVILKVGKAAAKTHDLYFTFGTGSTNRVCIFKDFFLAFMKDLQKEL 296          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig102.830.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FZ85_ECTSI2.460e-23599.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A355DRG2_9CYAN3.940e-6240.86Uncharacterized protein n=1 Tax=Cyanobacteria bact... [more]
UPI0016862D4D2.680e-5941.44hypothetical protein n=1 Tax=Calothrix membranacea... [more]
A0A846CFV2_9CYAN8.710e-5939.59Uncharacterized protein n=10 Tax=Okeania TaxID=145... [more]
A0A1Z4N8I7_9CYAN1.670e-5740.55Uncharacterized protein n=3 Tax=Nostocales TaxID=1... [more]
A0A6L9ZSK1_9CYAN1.880e-5740.07Uncharacterized protein n=2 Tax=unclassified Okean... [more]
A0A351L9G3_9CYAN3.730e-5739.39Uncharacterized protein n=2 Tax=unclassified Cyano... [more]
UPI00139143D83.730e-5739.18hypothetical protein n=1 Tax=Nostoc sp. B(2019) Ta... [more]
A0A0F5YFH2_9CYAN1.100e-5538.23Uncharacterized protein n=1 Tax=Limnoraphis robust... [more]
A0A1D2P8J3_9CYAN1.600e-5539.59Uncharacterized protein n=1 Tax=Scytonema millei V... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig102contigEcto-sp6_S_contig102:26678..36541 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size996
Hectar predicted targeting categoryother localisation
Exons9
Cds size996
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig102.830.1prot_Ecto-sp6_S_contig102.830.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig102 26678..36541 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348735.734214-CDS-Ecto-sp6_S_contig102:26677..267521682348735.734214-CDS-Ecto-sp6_S_contig102:26677..26752Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 26678..26752 -
1682348735.7468731-CDS-Ecto-sp6_S_contig102:28122..282541682348735.7468731-CDS-Ecto-sp6_S_contig102:28122..28254Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 28123..28254 -
1682348735.760402-CDS-Ecto-sp6_S_contig102:28800..288961682348735.760402-CDS-Ecto-sp6_S_contig102:28800..28896Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 28801..28896 -
1682348735.7689922-CDS-Ecto-sp6_S_contig102:29487..295941682348735.7689922-CDS-Ecto-sp6_S_contig102:29487..29594Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 29488..29594 -
1682348735.7782164-CDS-Ecto-sp6_S_contig102:30337..304701682348735.7782164-CDS-Ecto-sp6_S_contig102:30337..30470Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 30338..30470 -
1682348735.7865267-CDS-Ecto-sp6_S_contig102:31460..315831682348735.7865267-CDS-Ecto-sp6_S_contig102:31460..31583Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 31461..31583 -
1682348735.7952101-CDS-Ecto-sp6_S_contig102:32523..326681682348735.7952101-CDS-Ecto-sp6_S_contig102:32523..32668Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 32524..32668 -
1682348735.8035047-CDS-Ecto-sp6_S_contig102:34649..347421682348735.8035047-CDS-Ecto-sp6_S_contig102:34649..34742Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 34650..34742 -
1682348735.811498-CDS-Ecto-sp6_S_contig102:36449..365411682348735.811498-CDS-Ecto-sp6_S_contig102:36449..36541Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig102 36450..36541 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig102.830.1

>prot_Ecto-sp6_S_contig102.830.1 ID=prot_Ecto-sp6_S_contig102.830.1|Name=mRNA_Ecto-sp6_S_contig102.830.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=332bp
MAEPAAAAAGTTEGEPGPGYTRVDIPFVIDRILVTDAELIRKIADHPDVD
RVHGVPTKERPWWINAYFPATRFIDRQDEMFVPLTSTSDPNYEHRRTYVE
EMVKDGVAEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGQDIPADIV
EHSSKTANTIGDALSSGYFPTLRHQGKVMDFIEQNNELHQGCPVADFSHH
IGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQGDMPMTVATPRIAIKDST
LGGLLKKPAKAKWTMFILNIRQAAAETKDSLFTFGAGVDKRQCAFRFAFQ
KLMADLQTELARLEAADAAEGAAATDTSQTG*
back to top

mRNA from alignment at Ecto-sp6_S_contig102:26678..36541-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig102.830.1 ID=mRNA_Ecto-sp6_S_contig102.830.1|Name=mRNA_Ecto-sp6_S_contig102.830.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9864bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:26678..36541- (Ectocarpus species6 EcLAC_371)
ATGGCCGAACCTGCCGCTGCCGCCGCCGGTACAACGGAGGGAGAGCCTGG ACCGGGCTACACGCGAGTAGACATTCCGTTCGTCATCGACAGGTACATAC AGCAGTGGGAGACAAACAGAACAGACAGGCATTCCGTTCGTCATGGAACA TGTACAACAGCAGTAGTAGGAGACAAATAGATAGACAGCCCGTTGTTAGT TATCGAAAGGTTCGTACATACATACGGCAGGAGACAAGAAGACAACATGT GTGGGGTGGATGCTCCGCAGAGTACTGTCTACGTGGCCTCCGGAGAGAAA GGGGGGTATAGTCATAGTCGTGCATGCCGTAGTCGTTAGACCATTGACCT CGCATCCCTACAAAGCCGGGACGGAGCACGCCGGGGGTACGCGGGTGGTA TATGTTCATTGACATGCCGCGCGGGGATCGTCTTGCCTCCCGCGTGTGTG TTGCCACTCGTGCGGACGGCGACGGCGCCCGCACGTATGCTTTGGAGCCT CGAGGTTTGACCGAGCATAACGTTCTCAGTCCCTCTTGAGCGCCATTTAC TACAACGGTCGCAATTAGATATTAGGTTATACTGTAGGTTCTGAACCGCG CTCGCCCACAGGGGTACAACTCAAGTTCTAGGTATTTTGTTTTTTCGAGG CTAAATATATCAAGCTGCAGATAGGCTTTGGCACAACCGCCGGTGTGCAG GTGCACTGCGATGGCATACCCTTACTGCTGTGGTCAACGCCCAACAAAAT TGTGCGTTCTGCCGTACCACGCAGTGCTTCCCTATGAAAAAAAGGAATCG AAAGTTTTTTCGACAGTTGCGTTTTGAAGAAAAAACATAACTTCTGGTTG TGTTTGGGTGGGTATTTTTGTTTAGTTTTTCGAGGCTCTGCTCAATTTCT TAGCTGCAAAGTTCTAAAGTGCGGGCTCTACCTGTAGGACACGAGTCAAG AGGAGGGCTGGGGGAGGGTCTGTCCTCGTGGTTCAAAACCGGGGAACGCC CTTCCTTCTACACGTATCAGACAAGCACCACAAAATTGTCGCTCGCGAGA GAATACTTTCTTCCGGGGTACCTCCGTAAACACGACAAGGCAATTCGCTG TTGCAATAAAACTCGTCGCGTTCCATGTCTGTCTACAGAACAAGCCTGCC CCCTGTTTTTCCGCGAGTGAGCGAGTGACGATACCTCCCCTCATTCCCAA TCTGCGGGGGCCCGTTACGTCGTTTGTCTAGTAGGGGTTGGTCTTCACGT CATAAAAAAAAAAAAATGTGTTATTTGTCTTTCGTCTCCTACAGCTGGAA AGAGGCCAATCGTTTCACAACAACACCCACAGCGAAATACCTCTCTCACC TACCCCTACCACCTGACTTTTTTGGCTCCGCTGTGAGAGCTACCGCACGT GCATGGTTGGCGGCGAAGTAAGCCTCTCGCGCGTATGCGTATTGTATGTG TGTGAGCACAGCTAGCTCCACCGTTTTTCGTATGTGAGCGCATCCATCCG CGCGACGCGCGCGTGCCGCGTGTGTGTGTGTGTGTTTGCTTTCGTGAGCA TCGACCACGCTGGCTAACCCGCTGACCAACGAAAAGACGTCTGTGTCGTG CGTTTTGAAGCCACAAAATTCTTTTAAATTCTTGTACAGGCTATACCATG ATCATCTGGGATCCCGTGAGGGGGCGTCATCGGGCAGGCTATGCTACTCT GCGGAGTAGAGACTATAATACCGTATGCGGCAATAGCAGAAGAAAACTGC ACGTGTTTACCATGGCTTAAGTGGTATGTGTGTGTGTGTGTAACGGCAGG ATCCTGGTGACGGACGCGGAGCTGATTCGGAAGATCGCCGACCACCCGGA TGTGGACCGGGTTCACGGGGTCCCCACGAAGGAGAGACCGTGGTGAGTCT GTCTGTCTACGGTCAGGATTTTTTTCTTGCGAAATTGTTTCTTCTGATTC ACGAGAAGCCTTGGTAAGCCTGTCTACACGAGTGCTTGTTGTGAAATTGT TTTGCGTTACTTGGTCCCAAGTCTGTGCATGCTTGTGAAATGATTTTTGA TGCGCGAGAGAAGCCTTGGCATTGTCGTTTCTTTAGCACCGTTGTTGTCG GGATTTTTTCTCTCTCTCTGATTGAGGGGATGGTCTGCAACGGAAAAAAA TTCAAACTCGATCCACCTTCTTACGGCCCCTGGAGAAATACGTTTTCCCA GTGGTAAAAATAAAGGCCGGTTCAGGTTTTTGTGGGTCACAACATGCATC ATTTCACGTCCTCCGCTTGTGTACGGCCAACAACACACAGAGCGTCCTGT TTCTGGGACGCGGGCAGAGGTTATAGGTATGACCACACGCCATTGGCTCG GTTTGTGGATGTCGTGGGGCTAAAGCCTCCGTCTGACGTGCGTTTTTGAC TGGTTACACTACACATGCAGCAGGCATCTTTTTAGCCGAAAGGCAAGAAG GTCAGCAGCGCCAAGTGGCAGGGGGTGATCTTTTACCGGCTCGTTTGCGG CCAACAATACATAAAACGCCCTGAATGTTTGACACCTGCGCAGAGGGTTG GCGCATGCCCTCACGATACTGGCCTGTGTTTGGGCAGCAGACGGTGAAGT TCCTCGTTCTGACACGATCGGCGTGTGACACCCCCCCCGATTCTCACAGC GAAAAAATCAGCCGATTCGCTGTTAGAAAACGAGCCTTTTTTCTAGCTCG CTGTTTAGCTGTACTTAAAAATATCCGAGCTGTGAGAATTTGGGCCCTAG AAATTTACCATTTTTCTCCGCTTAAGAAGCCCACATAATTCCTTGGGCTG ACAAAATGGCCCCCTCCCCCGAATCCAAAGCAGAACAACAGACGTTGGGT GCGTAAGAAAGCGCCTACTGACATTGGGTGCGTAAGAAAGCGCCTACTGA CGTTGGTGCGTAAGATAGCGCCTACTGACGTTGGTGCGTAAGAAAGCGCC TACTGACGTTGGGTGCGTAAGAAAGCGCCTACTGCTGTAGGACTCTGCTG CCTGCGACGTGAGAAGCCCCGGTAGGTCTCTGCTTGCGAACAGCAAATTT GATTCACGAGAGAAGCTTTGGTTGAAGCAAGTGTCTCTGTTGCTCGCGAT TTGTTTTTTGTATTCAAGGGGTCCGTGCCGCGTACAAGCCTTGGTAAGTC TGTCTTGTCTATGCTTGCCTACGTTTCTTTTTGATGCACGGGGTCCTCAC CAAGTCTGTAGCGGGACACGTCGTGGCCGGTGGTGCTGGCGGCGAGTCGG TCGGTGTGTGTGTTGTGTGCTTATTGGAAAGCTTACATGATCTCGCAGGA AGATACTCGTTCGAGATATAAGAAGGGGATGTGTTGAAGTATTGGGAAGA AAACTGGCTGGATACTGGGCTTAGCTAGGGTCTATTGAAGCCTGTACGTT GACTTTTTTTCAGCGTTTGTTCTTTTCCGTGGAGTCTGGCGTTGTTTTCG AGTCGTTGCGTTGAGGGGTGCTTCTCTGCGATGGCCCCTGTCGTTGTCGC TACTCTTATCGTTGCTGCTTCTGCTGGTCTCTGGTTTTTGTTGTGATTGC TTTGGGGACGGAAACTTTTCTCGCCACCGACCGCTGCTAACCCCCCCCGG CCTGGTTCTAAACATGGTGGACAAACATCTCCTACTTACCAACAACTCTG CTGTTTCTGAAAGTTGTTAATGATTGCTGGGGGACTGAAACTGCTCTCAC CACCAACCACTACAACCCCACCAACTTGGTTCTAAACAACGAGGACAAAC TCCTCCTACTTGCCAACAACTCGGCTTTGGGGCAGAGAGAGAGAGAGAGA GAGACGGCTGTACACGTGCATGCCGCATGCCTCTAACACCCGCGCCCCCG CCCCCTGGTCTTCACTAAACAAGGTGGATAAACGCCTACTTCCCGGCGAC CCGGTTCATTGACCGGCAGGACGAAATGTTCGTTCCCCTTACCTCGACCT CCGACCCTAACTACGAGCACCGTCGCACCTACGTCGAAGAGATGGTCAAG GACGGCGTCGCCGAGGAGGTACGTACGTACGTACGTTTGTACGCATACGT ACTTCTCTTCTTTGTGTTGTGTTTTTTTTTTTTCGTTTACCAACACCGCC GCGCCGCACCTACATCCATCGGAGAGAGGACCAAGAACCGTGTGCCGTCT GTTGTTGTTTCGTTTCGTTCGTGTTTCGTACGTGTGTGTCTCGTTTTTTT TTCTTTCAATATACGCAACGAATCCATCTCCATCTACAGAAAATAGTCTA TAGGCCGACTAGCAATGGCTTCAGAGCGTCAACGGAAGGCGTACCAATAC TCGTAGGATCTCCCAACGAGCGTACAGCGATAGCTCCCCTGTGGGTAACA GACTCAACGAGACAGTTTGGTGGCCATCTGGTGCATCTTCTCTTCGTTCT TGCAACAGGCCGACCAGGAGTTTCGTATGCAACGTACGTACGTCTCTTTG TTGATCTTGTTTGTTTTTATTGGTATAGTGCTCGCGTGCGTGTCTTTCGT GCCTCGTGTGTCCCCTGTACGCACGTATCTTGTTGGTGTTGGCTTGTTTA TTGTGGTGCGTGCGTACGTCGTGTGTCTTTTCGTTGTGCTTCCTTTTGTC CTACCGCCGCAGCCGCTGCCAATGCTGTGGTTATTCGTCGGAACCCAGGG AGAGAAGACTGCGAATAATTCCTCCTCCTCCTCATTATGGGATCAACCAT TGTATGCAAAACAAATACAACCTATCTCTCTTCCGACCTCGTTCCCTCTT CCCGGCCCCCTCCCTCCGCGGACTTTTCTCCCCCCGCAAAACCTTGGCCG GCGAAAACCCAGCATTGTGCTCCGTCCCCGGCATCTGTAGGGATGCGAGG GCCATGGTCTAACGACTGCAACGGCTTGCAACGGCATGCGTTTACATGAG TACCCCCCTACCGACAAACGCCTAAAATGCTTTTTTGGAACTCCTCCTCC CCCGGCAGGACGTGAAGAAGATCGCGTACCTGATGCACACGGGGGCCCCG CAGGATGAGCTGGAGAGGGCCGTGGTGAACGGAGTCAACCGTCGCTTCTT CGGCCAGGATATTCCCGCCGACATCGTCGAGGTATGTTGTAGGTGTGGCC CACCTCGGATGACGTCATCGAGGTTGTAGATGTGACCCGATGACGTCATC GAGGTATGCGGGCGTGAATCAATCGATGACGTCATCGAGCTAGGTGGTAG GGGCGACCCGATGACATCATCCAGGTAGGTAGGTGTGACCGAATGACGTC ATCGAGGTAGGGAGGTGTGACCGGATAACATCATAGAGGTAGGTAGGTGT AACCCGATGACATCATCGAGGTAGGTAGGTGTGACCCGATGACATCATCG AGGCAGGTAAGTGTAACCCGATGACGTTCATCGAAGTATGTTGTGTTGTG CTGACCTATGTTGTACAGCACGCGCCGAAACCTAAGAAGGATAAACTTGT GCCACTTTTTATTTGCCGTTACGGAGTCGTTTCTCGTTGTTAATCGATCT CTTCCATGAGCGTCGTTACCGTCGACTTGTTTTTTGTTGTTGTTGCTGCT GTTGTTGTTGTTGTCACAGCACGCCTGGCAAGAATAACCCTAACCCACAA CCCTAGTCCATGCCGTTGTCGATATTGTTGTCGTGTTTTTTTTTGTCTTT GTTGCCGGTTTCGATCGCAGCACACCGGCAAGACTATATGTGAATCGTGT CGTTGTCGTCGTTCTTGTTTTCGAGCAGCACGCCAGCAAGATTGTCACTC GTGTCGGTTGTAGTTCTTGCTGTTGTTCGACCGCAGCACGCCGGCTAGAC TGCTACAGTTCATGTTGTTTTTCTTCACTTTTCGTCGTCTTGTCGTTGCC TTTGCTGCCGTTCGATCGCAGCACGCCGGCTTGACTACAGTTGATGTCGT TGTCGTTAATCGATACATACAGAACTCGCTATTATTTTCGTGGTCTTGCG GTTGCCTCTGCTGCTGTTCGACCGCAGCACGCCGTCTAGACTGCTACAGT TGATGTCGTTGTCTTTACTATTGTTTTCGTCGTCTTGTCGTTGCCTTTGC TGCTGTTGTGTTCGATCGCAGCACTCCAGCAAGACGGCCAACACCATCGG AGACGCGCTCTCGTCCGGATACTTCCCGACCCTGCGGCACCAGGGGAAGG TGATGGACTTCATCGAGCAGAACAACGAGCTGCACCAGGGCTGTCCCGTC GCGGGTACGAAACTTGTAGAGAGAAAAATGCTCCCCTCCCCCCCTCCCCC ACTTCCCCCTTCCCCCCCTTGACAATGCATCACGGGGACCCCGGAGGGAG GCTGTGAAAGTTTATTTATCGTCTTCTTGCTAGGAGTTGGGCACGTCTTG CTTGTTACACGAGGGGTCATCATCGTGGGTACGTCAAGGATAAGGATAAG GGTGATGTCATGGCCGTGTTGGATGAACACGCAAAGGACCCACCACGTTG GATGTACAGCGATTCTGCCCCTTCCTTTTTTAGGCCGCGTTTGGATGTAC TTTAAAGTAAAGGGATGATCATCAACGGCATCGGATTTACACTGTAAGGG ATGAGGATGATGACGTTGCCGTGTTAGATGTACAGTGATTCGTCGCCCCC CTTTTTCTCATCGCCCGGGCTACGAGTGTGAGATACGCCTACTCCCCGCT TCGAGACACAAGACTTTTTTTTTTTTTTCAAACCTTCGGCAGATATTGTC CCTTCTCCGGGGTCCCCGTGATGTGTTGTCCGGGGTCCTGTTTCCTCGCT ACCGACCCGATTTCTCCTGCCGCCTCTCAACAATTTTCTACCCCATCCAT CCACATGAGGATGGTTGATGGAGTCGGATGAAAACCTCGCTCCGTGGTCC TTGTTGCTTGCTACCACACGTATACGAGGTACAGATTCCCCCCTTACGCC AGGGTGTTTGATTCAGTCGGAATACGCCCTCCCCGACATGTTCACAGATT TCTCCCACCACATCGGGGCGGCGGCGCAGCTGCTAACCCCGTCTTGCCAG TTCCTTCACAAGGAGAAGGACCGCTCCAGGGCCATCCTTGACATATTCAC GCAGGTAGGCGATGATTGAATGAGTGAATGGGAAAGAACCCCTAAGGCCC TTGGCTTCAGCTTCATGGCGAACCGCTGTCCTTGTGGTGGTTGTTGTTGG TGATGTTGTTGGTCGTTGTTGTTGTTGCTGTTGTTGGTGTGTTGGATGGG GTAGAACGACAAGTTGGCGATGAGTCCGAAGCTTTGCCTGACCTACGTGT ACTTGTCTTGTGTGTCTCGTTGTTTTTGTTTCTCTATCGGCCCCGCCCCC TCCGTCGGACGGAGTAGGACGACAACTCTGCAAAGAACTCATGATTTCTG ACCGACGTGTCATCATGATGATGATGATGCCTATACGCAACCAGCGCTGG TTGACGATGAGGTCGTTTGCTTCAAGCAGGAGGTTCACGCCCTCGCAGTA GCTTGATGTGGGGTATTGCTTGGTCATCTCGCAACATCGCGGCGTCTGTC CCTACGACACATGCCGGGAACAAATCACGCGAAAGTGTGTGTGTGTGTGC TGCCGGCGCGCGCGTTGGTTCTCAGCACGGACTTGCATGTTTAATTGGTT TGGTTTCTGTCGCCGCCCCCCCCCTCCCTCTGTTGGATGTTGGAGCAGGG CGACATGCCGATGACCGTCGCCACCCCGCGGATCGCCATCAAGGACAGCA CCCTCGGGGGCCTGCTGAAAAAGCCTGCCAAGGCGAAATGGGTGAGAACG GCGAGAGGGAAAAGGGGGGCAGAGAAAGGCGGGGGGCAGAGAGAGAGAGA TAGAGGGAAAGGGAGAGGGAGAGGGAGCGGGAACTGAAGAGGGATATCAC CGTGCCTTATCAAATAACACCGCTCGGTACTGCTGGTGATACGATACTCA CGTATTGCATGTCTCGGACTCGAACCGTGTGTCTTGTTTGGTGCACCTCA CATCTTTGTGTATGCACACAATACACAGAACAGTACTGTTGTTGCTGCTG TTGTTGCTGTTGTTGTTGTCGTCGTCGATGTTTGTGTCTCCGAGACTTGA CGTGGTTGTTCTTTCAACAGGCACATGACGTTTCTCGGCGAAGGCCTCTT GTCCCGAACAAGGCACGGCGTCAATAGTAGCGATACCTTGGTGCTTTTAT CCCGAGTATAACAACTCACGTATTTTGGCTGGTCAGGCGGCTAGCGTGGC TTGATCGGTTCTAAGCTCAACAACCAACAACAAACACACGCCCGCACGCA CGCATGTACTCACGCCCACGTTGCCCTCCTCCCGCAGACGATGTTCATCC TGAACATTCGGCAGGCCGCCGCCGAGACGAAGGACTCCCTGTTCACGTTC GGTGCCGGGGTGGACAAGAGGCAGTGCGCCTTCCGCTTCGCCTTCCAGAA GCTCATGGCCGACCTGCAGGTGTGGCAGCTACTGCTCTTGCTGTTCATGC ATGTGTTTTCAAAACAGAGATCGGTACTGAACATATGAAGTTGGTCTTTC GTCTTGCTACTGTAGACTGTGGAGGCTCTCTTTTTCTCGCAATTCGAAAA CGTGTCGCGTGTGTATGTGTAGAAGACCTCGCAACGATCGACGAACCAAG AACAAGTACAGACGGCACATGAGCGATCTTGAGGTGGGTGGTACTACCTA ATGATATTTCAAAACGGTTTAGCGTCACCGCATCCATGAATGCGTTAGTT TCACGTCTGCTAGAGTCTCTTGGTTCTCCCACTTTAAACACGTCCCACCC ACAGCACCTCCAACACACGTCGAAAATTCAACCAAGCGAAACCGTCAGGA CAATACATAGGCGACCTACAGCTAGCTGGGTGCTCCAGATTGCGTCTGCG CTCAAGAACTCCTTGGTTTAAAGAACTTGGTGCGCGGCACCACCGTATCG AACAGAAGAGTTTGAGCCTGGCTTGTGAGCACGGATAAGAACCAATCGAA CCATACAACCTAAAGATGTCAAGGTACGCGGATGCCCTGAATCAAGGGTA AGATCCCTCCAAAGTCTGTAGACGACGATTTCCTCTTTGGATACTACACA CGCACGCGTAGCAGACGGATAGAGCGGGTCCCTGAAGGGTATGCTTTGTG CCCCGTGCTGCGTGTAGGGGTTCCGTGAGGTGAATGGCGGCCTACTCCCA GAGTACGACCAACACCACCACCACCACCACCTTGTGCTTATTTTCGATCG TCCGTTCTCAACAAATGTATGACAACTCCCGGTTGGAAGTTTCCGCCTAC GAGTAGAGTTGAAGGGCTGGCGAGACCGTCCGAGAGGTGGCACCACCACC ACCACCACCACCACAACCACGACCTTGTGCTTCTTGGTGGATCGCCCGTT TCTTGACAAATGCACGAGACTTGTCAGTAGGAAGGTTTACGCTCTTCTCG TGCCTTTTCGCTACGAGCAGAGGTTTCCGGCTTGCTTGTGGAGGCTACCA TCAGGGTTGCTAGCACCACGCTCTAGCACCACGCTGTCCTTCTCATTGGT CTTCCGTGCTCGACGAATACATGAACAACCATAGAGACCAGAGAGACAGT TCCGCGGTAAGGGGTTACCGCTAGGAACCCTTCTCATCGTCATCGTCGTC TTGGTTGCCCTAGCAGATCTCGCATCCCACCCCTCTCACCATTGTCCCCA CACGCGCGGCGCCAATCTCACCAACCGGCTGCACTAATCGCCTTCCCCCC TTCGTCTTTGTTTTGCTGGTCGTCCTCAACTCCTCGTTTCCGTTTCGCGT GCGCGATGGTGATTCTTTCCACCCCGCCAAACAAACAAGACGGAGCTAGC TCGGCTCGAGGCTGCAGACGCCGCGGAAGGTGCTGCTGCTACCGACACCT CCCAGACGGGGTAA
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig102:26678..36541-

>mRNA_Ecto-sp6_S_contig102.830.1 ID=mRNA_Ecto-sp6_S_contig102.830.1|Name=mRNA_Ecto-sp6_S_contig102.830.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=996bp|location=Sequence derived from alignment at Ecto-sp6_S_contig102:26678..36541- (Ectocarpus species6 EcLAC_371)
ATGGCCGAACCTGCCGCTGCCGCCGCCGGTACAACGGAGGGAGAGCCTGG
ACCGGGCTACACGCGAGTAGACATTCCGTTCGTCATCGACAGGATCCTGG
TGACGGACGCGGAGCTGATTCGGAAGATCGCCGACCACCCGGATGTGGAC
CGGGTTCACGGGGTCCCCACGAAGGAGAGACCGTGGTGGATAAACGCCTA
CTTCCCGGCGACCCGGTTCATTGACCGGCAGGACGAAATGTTCGTTCCCC
TTACCTCGACCTCCGACCCTAACTACGAGCACCGTCGCACCTACGTCGAA
GAGATGGTCAAGGACGGCGTCGCCGAGGAGGACGTGAAGAAGATCGCGTA
CCTGATGCACACGGGGGCCCCGCAGGATGAGCTGGAGAGGGCCGTGGTGA
ACGGAGTCAACCGTCGCTTCTTCGGCCAGGATATTCCCGCCGACATCGTC
GAGCACTCCAGCAAGACGGCCAACACCATCGGAGACGCGCTCTCGTCCGG
ATACTTCCCGACCCTGCGGCACCAGGGGAAGGTGATGGACTTCATCGAGC
AGAACAACGAGCTGCACCAGGGCTGTCCCGTCGCGGATTTCTCCCACCAC
ATCGGGGCGGCGGCGCAGCTGCTAACCCCGTCTTGCCAGTTCCTTCACAA
GGAGAAGGACCGCTCCAGGGCCATCCTTGACATATTCACGCAGCAGGGCG
ACATGCCGATGACCGTCGCCACCCCGCGGATCGCCATCAAGGACAGCACC
CTCGGGGGCCTGCTGAAAAAGCCTGCCAAGGCGAAATGGACGATGTTCAT
CCTGAACATTCGGCAGGCCGCCGCCGAGACGAAGGACTCCCTGTTCACGT
TCGGTGCCGGGGTGGACAAGAGGCAGTGCGCCTTCCGCTTCGCCTTCCAG
AAGCTCATGGCCGACCTGCAGACGGAGCTAGCTCGGCTCGAGGCTGCAGA
CGCCGCGGAAGGTGCTGCTGCTACCGACACCTCCCAGACGGGGTAA
back to top