mRNA_Ecto-sp6_S_contig101.825.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig101.825.1
Unique NamemRNA_Ecto-sp6_S_contig101.825.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 2.300e-89
Identity = 384/420 (91.43%), Postives = 388/420 (92.38%), Query Frame = 1 
Query:    1 MPAPREDAEDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGEDIEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMAVDNERVTTPSALMPAIAQADERDRPRLERDPRHGSRVHWATARAPEPTCQDGAGEGRGRVGWPTRPGGXXXXXCGEPRRARWR 1260
            MPAPREDAEDR K LGDAA +IFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTA + AGAGED+EAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   VDNE VTTPSAL+                DPRHGSRVH AT RAPEPTCQDGAGEGRGRVGWPTRPG XXXXX   PRRAR R
Sbjct:    1 MPAPREDAEDRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDNEGVTTPSALIG---------------DPRHGSRVHGATDRAPEPTCQDGAGEGRGRVGWPTRPGXXXXXXXXXPRRARRR 405
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BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 5.730e-71
Identity = 129/148 (87.16%), Postives = 136/148 (91.89%), Query Frame = 1 
Query:    1 MPAPR--EDAEDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEE-VVTAFIGAGAGEDIEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 435
            MP PR  +DAEDR KILGDAADMIF+LMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGA+GSAG RGCDD TLLHAAAEGGNEE VVTA I AGA EDIEAKV+G+V GTPLHVAVATGK+AAAR +MLAGADVNAADRNGD
Sbjct:    1 MPWPRREDDAEDRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAKVVGMVRGTPLHVAVATGKEAAARAMMLAGADVNAADRNGD 148
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BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 6.900e-68
Identity = 120/145 (82.76%), Postives = 125/145 (86.21%), Query Frame = 1 
Query:    1 MPAPREDAEDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGEDIEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 435
            MPAPREDAEDRVKILGDAADMIFKLMCDRATSEQW EWLRAPLEHAAGTAN+DLVEKLLKAGADGSAGWRGCDD TLLHAA       VVTA I AGAGED+EAK  G  GGTPLHVAV  G++AAARVL+LAGADVNA D N D
Sbjct:    1 MPAPREDAEDRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPG-TGGTPLHVAVMRGQEAAARVLVLAGADVNAVDHNTD 144
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BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 5.670e-44
Identity = 90/137 (65.69%), Postives = 104/137 (75.91%), Query Frame = 1 
Query:   25 EDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGEDIEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 435
            E+R  IL D  D IFKL+CDRAT EQWAEWLRAPLEHAAGT N+DLV+KLL AGA+  AGWRGC  KTLLHAAAEGGN  V+T+   AGAG D++AK L   G TPL +AV  GK+AAA+ L++AGADVN  D   D
Sbjct:    5 EERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLD-TGHTPLDLAVIGGKEAAAKALIMAGADVNTLDATND 140
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BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 3.540e-43
Identity = 87/137 (63.50%), Postives = 103/137 (75.18%), Query Frame = 1 
Query:   25 EDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGEDIEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 435
            E+R  IL D  D  FKL+ DRAT +QWAEWLRAPLEHAA T N+DLV+KLL AGA+G AGWRGC  KTLLHAAAEGGN +V+T    AGAGED++AK L   G TPL +AV  GK+AAA+ L++AGA+VN  D   D
Sbjct:   47 EERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAKALD-TGHTPLDLAVIGGKEAAAKALIMAGANVNMLDATND 182
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BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 7.150e-37
Identity = 80/135 (59.26%), Postives = 97/135 (71.85%), Query Frame = 1 
Query:   25 EDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGEDI--EAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAAD 423
            +DR   L    DMI  L+CD AT  QW +WLR PLEHAAGT N  LVEKLLK GA+ SAGWRGCD +TL+HA AEGG+E+V++    AGAG+ I  +A + G+   TPLH+AV+ GK AA +VLMLAGADVN  D
Sbjct:    5 QDRKSTLHGTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRTLMHAGAEGGSEQVISMLTRAGAGKYINDQAPLSGL---TPLHLAVSGGKLAATKVLMLAGADVNRLD 136
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BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D8LKW6_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW6_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 2.930e-30
Identity = 77/136 (56.62%), Postives = 90/136 (66.18%), Query Frame = 1 
Query:   25 EDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGEDIEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNG 432
            EDR  + G    M+FKL+ ++A S QW+EWLRAPLEHA    + DL   LLKAGADGSAGW GC D+TLL AAAEGGNEEVV   +  G  E+++  V G    T LH A+A G   AARVLMLAGADV   D  G
Sbjct:    5 EDRTALNG-LEKMLFKLVSEKAASAQWSEWLRAPLEHAVAEGDNDLALALLKAGADGSAGWEGCGDRTLLQAAAEGGNEEVVLTLLDNGGVEELDV-VSGDNERTALHRALAGGHTEAARVLMLAGADVGLLDVKG 138
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BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D7FPN3_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN3_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 3.970e-30
Identity = 64/93 (68.82%), Postives = 73/93 (78.49%), Query Frame = 1 
Query:   25 EDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGED 303
            EDR  IL  + D  F+L+CDRAT EQWAEWLRAPLEHAA TA+ DLV+KLL AGA+GS GW GCD KTLLHAAAEGGN +V+ A + AGA  D
Sbjct:    8 EDRANILRGSEDTTFRLVCDRATPEQWAEWLRAPLEHAAATADHDLVKKLLNAGANGSTGWVGCDGKTLLHAAAEGGNAQVIMALLRAGAAGD 100
[Close]
BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D7G2A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A9_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 8.890e-29
Identity = 58/81 (71.60%), Postives = 67/81 (82.72%), Query Frame = 1 
Query:   31 RVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGC-DDKTLLHAAAEGGNEEVV 270
            R +I+ D  D IFKL+CDR T+EQW+EWLRAPLEHAA TAN +LV KLL+AGA+G A WRGC DDKTLLHAAAEGG+  VV
Sbjct:    2 RARIMQDLGDTIFKLVCDRVTAEQWSEWLRAPLEHAAATANYELVSKLLRAGANGGASWRGCHDDKTLLHAAAEGGDALVV 82
[Close]
BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Match: D8LH19_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH19_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 1.630e-28
Identity = 69/133 (51.88%), Postives = 87/133 (65.41%), Query Frame = 1 
Query:   25 EDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGEDIEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAAD 423
            ++R   LG   + +FKL+   AT  QWAEWLRAPLEHA    NQ L   LL+AGADG AGW+GCD ++LL  A +GGN + V+A + AG+  D+ A V G    +PLH A+A G  A ARVLMLAGA V+  D
Sbjct:    5 DERTAALGGTEEQLFKLVSRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDVAVQGGNSKTVSALLEAGSLGDVNA-VTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLD 136
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.825.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQP1_ECTSI2.300e-8991.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXY4_9PHAE5.730e-7187.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQP2_ECTSI6.900e-6882.76Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D7G2A3_ECTSI5.670e-4465.69Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LHQ7_ECTSI3.540e-4363.50F-box domain and ankyrin repeat protein n=1 Tax=Ec... [more]
D7FM65_ECTSI7.150e-3759.26Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
D8LKW6_ECTSI2.930e-3056.62Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FPN3_ECTSI3.970e-3068.82Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ecto... [more]
D7G2A9_ECTSI8.890e-2971.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LH19_ECTSI1.630e-2851.88Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig101contigEcto-sp6_S_contig101:627384..628750 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score289.7
Seed ortholog evalue2.3e-75
Seed eggNOG ortholog2880.D7FQP1
Model size1263
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
Exons2
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-16_001080.1
Cds size1263
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348735.0429943-CDS-Ecto-sp6_S_contig101:627383..6284791682348735.0429943-CDS-Ecto-sp6_S_contig101:627383..628479Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig101 627384..628479 +
1682348735.053186-CDS-Ecto-sp6_S_contig101:628583..6287501682348735.053186-CDS-Ecto-sp6_S_contig101:628583..628750Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig101 628584..628750 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig101.825.1prot_Ecto-sp6_S_contig101.825.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig101 627384..628750 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig101.825.1

>prot_Ecto-sp6_S_contig101.825.1 ID=prot_Ecto-sp6_S_contig101.825.1|Name=mRNA_Ecto-sp6_S_contig101.825.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=421bp
MPAPREDAEDRVKILGDAADMIFKLMCDRATSEQWAEWLRAPLEHAAGTA
NQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTAFIGAGAGE
DIEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGDTPLHL
AIGKDHVRLAKDLLLGGANPKARGFAHDCPIHVAARVGRHDVVHALAHKG
ADLDALDDEGKTPISLAVEGDHVSTVKVLLAAGADAKRQTDRLKTALHVA
VKCNKSGAIPALIEAGADIEARMSLGRSPLWYAAWKGSCAAMLVLLQLGA
DANSHDEIGWTCLHAASLNGHADAADLLLRWGADEMAVDNERVTTPSALM
PAIAQADERDRPRLERDPRHGSRVHWATARAPEPTCQDGAGEGRGRVGWP
TRPGGGGGGGCGEPRRARWR*
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mRNA from alignment at Ecto-sp6_S_contig101:627384..628750+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig101.825.1 ID=mRNA_Ecto-sp6_S_contig101.825.1|Name=mRNA_Ecto-sp6_S_contig101.825.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1367bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:627384..628750+ (Ectocarpus species6 EcLAC_371)
ATGCCAGCGCCAAGAGAAGACGCAGAAGACCGTGTCAAAATCCTGGGGGA
TGCAGCAGACATGATCTTCAAACTCATGTGCGATAGAGCGACATCGGAAC
AGTGGGCGGAGTGGCTGAGGGCCCCTCTGGAGCATGCAGCAGGCACGGCC
AACCAAGACTTGGTGGAGAAGTTGTTGAAAGCTGGAGCAGACGGGAGTGC
GGGCTGGCGGGGTTGTGATGACAAAACTCTGCTGCATGCGGCTGCCGAGG
GCGGCAACGAGGAGGTGGTGACGGCTTTCATCGGGGCTGGCGCTGGAGAA
GACATTGAGGCCAAAGTCCTGGGCATTGTGGGGGGGACTCCACTCCATGT
TGCAGTTGCAACCGGGAAGGACGCTGCGGCACGAGTACTGATGCTTGCTG
GGGCCGATGTGAATGCGGCGGACCGCAACGGCGACACTCCCCTTCATCTT
GCCATCGGTAAAGATCATGTACGGCTCGCGAAGGACCTTTTGCTCGGTGG
AGCCAATCCCAAAGCCCGAGGTTTCGCACATGACTGCCCTATCCATGTCG
CCGCCCGCGTAGGTCGACATGACGTCGTGCATGCCTTGGCCCACAAGGGG
GCGGATCTGGACGCTCTGGATGATGAAGGCAAGACCCCTATCAGTCTTGC
GGTGGAAGGAGATCATGTTTCGACAGTGAAGGTTCTGCTGGCTGCCGGTG
CCGATGCGAAGCGTCAGACGGACCGTTTAAAGACCGCCTTGCATGTTGCC
GTCAAGTGCAACAAATCAGGCGCCATCCCAGCGCTCATCGAAGCCGGGGC
CGACATTGAAGCTCGAATGTCGCTTGGACGGTCACCACTTTGGTACGCGG
CCTGGAAGGGCTCTTGCGCTGCCATGCTCGTTCTCCTACAACTGGGTGCC
GACGCGAACAGCCACGACGAAATTGGATGGACTTGCTTGCATGCCGCGTC
CCTAAATGGCCATGCCGACGCCGCGGATCTGCTTCTGAGATGGGGTGCAG
ATGAGATGGCAGTGGACAACGAGCGAGTCACCACTCCCAGCGCGCTCATG
CCAGCAATTGCTCAAGCTGACGAAAGAGACCGCCCGAGACTCGAACGTCT
GGCCGCGCTACTGGAGAAGGCTCCGCAGGATAGGGCCTGGCGTCGCCGGG
GCTTCCTGGTCTTGTGCCGCGCCCATCCTGAAAAACTACGGTTCGCAGAG
GAGATCCCCGACATGGCAGCCGAGTCCACTGGGCAACCGCGCGAGCGCCC
GAGCCAACGTGCCAGGACGGGGCAGGTGAAGGTCGAGGTAGAGTTGGGTG
GCCGACACGGCCAGGGGGCGGAGGCGGAGGCGGGTGCGGGGAGCCGCGAC
GCGCTCGCTGGAGGTAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:627384..628750+

>mRNA_Ecto-sp6_S_contig101.825.1 ID=mRNA_Ecto-sp6_S_contig101.825.1|Name=mRNA_Ecto-sp6_S_contig101.825.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1263bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:627384..628750+ (Ectocarpus species6 EcLAC_371)
ATGCCAGCGCCAAGAGAAGACGCAGAAGACCGTGTCAAAATCCTGGGGGA
TGCAGCAGACATGATCTTCAAACTCATGTGCGATAGAGCGACATCGGAAC
AGTGGGCGGAGTGGCTGAGGGCCCCTCTGGAGCATGCAGCAGGCACGGCC
AACCAAGACTTGGTGGAGAAGTTGTTGAAAGCTGGAGCAGACGGGAGTGC
GGGCTGGCGGGGTTGTGATGACAAAACTCTGCTGCATGCGGCTGCCGAGG
GCGGCAACGAGGAGGTGGTGACGGCTTTCATCGGGGCTGGCGCTGGAGAA
GACATTGAGGCCAAAGTCCTGGGCATTGTGGGGGGGACTCCACTCCATGT
TGCAGTTGCAACCGGGAAGGACGCTGCGGCACGAGTACTGATGCTTGCTG
GGGCCGATGTGAATGCGGCGGACCGCAACGGCGACACTCCCCTTCATCTT
GCCATCGGTAAAGATCATGTACGGCTCGCGAAGGACCTTTTGCTCGGTGG
AGCCAATCCCAAAGCCCGAGGTTTCGCACATGACTGCCCTATCCATGTCG
CCGCCCGCGTAGGTCGACATGACGTCGTGCATGCCTTGGCCCACAAGGGG
GCGGATCTGGACGCTCTGGATGATGAAGGCAAGACCCCTATCAGTCTTGC
GGTGGAAGGAGATCATGTTTCGACAGTGAAGGTTCTGCTGGCTGCCGGTG
CCGATGCGAAGCGTCAGACGGACCGTTTAAAGACCGCCTTGCATGTTGCC
GTCAAGTGCAACAAATCAGGCGCCATCCCAGCGCTCATCGAAGCCGGGGC
CGACATTGAAGCTCGAATGTCGCTTGGACGGTCACCACTTTGGTACGCGG
CCTGGAAGGGCTCTTGCGCTGCCATGCTCGTTCTCCTACAACTGGGTGCC
GACGCGAACAGCCACGACGAAATTGGATGGACTTGCTTGCATGCCGCGTC
CCTAAATGGCCATGCCGACGCCGCGGATCTGCTTCTGAGATGGGGTGCAG
ATGAGATGGCAGTGGACAACGAGCGAGTCACCACTCCCAGCGCGCTCATG
CCAGCAATTGCTCAAGCTGACGAAAGAGACCGCCCGAGACTCGAACGAGA
TCCCCGACATGGCAGCCGAGTCCACTGGGCAACCGCGCGAGCGCCCGAGC
CAACGTGCCAGGACGGGGCAGGTGAAGGTCGAGGTAGAGTTGGGTGGCCG
ACACGGCCAGGGGGCGGAGGCGGAGGCGGGTGCGGGGAGCCGCGACGCGC
TCGCTGGAGGTAG
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