mRNA_Ecto-sp6_S_contig101.824.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig101.824.1
Unique NamemRNA_Ecto-sp6_S_contig101.824.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI)

HSP 1 Score: 410 bits (1054), Expect = 3.070e-141
Identity = 209/224 (93.30%), Postives = 214/224 (95.54%), Query Frame = 1 
Query:    1 MPAPREDAEDRVKILGDAADMIFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAARHGRHDVVHALAHKGADLDALNGKGMTPISLAVEGDHV 672
            MPAPREDAEDRVKILGDAADMIFKLMCDRATS QW EWLRAPLEHAAGTAN+DLVEKLL+AGADGSAGWRGCDDNTLLHAA XXX   VVTA IRAGAG+DMEAKTPGTGGTPLHVAV+RGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAA HGRHDVVHALAH  ADLDAL+GKGMTPISLAVEGDHV
Sbjct:    1 MPAPREDAEDRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPGTGGTPLHVAVMRGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAASHGRHDVVHALAHTRADLDALDGKGMTPISLAVEGDHV 224
[Close]
BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 1.400e-72
Identity = 156/299 (52.17%), Postives = 176/299 (58.86%), Query Frame = 1 
Query:    1 MPAPR--EDAEDRVKILGDAADMIFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEE-VVTAFIRAGAGDDMEAKTPG-TGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTDT----------------PLHLAI-------------------------GVLGVDARIAQDLLLSGANPKA----------RGFAHDCPIHV---------------------------AARHGRHDVVHALAHKGADLDALNGKGMTPISL 651
            MP PR  +DAEDR KILGDAADMIF+LMCDRATS QWAEWLRAPLEHAAGTANQDLVEKLL+AGA+GSAG RGCDDNTLLHAAA   NEE VVTA I+AGA +D+EAK  G   GTPLHVAV  G+EAAAR ++LAGADVNA D N DT                P+H A+                         GV  V A+    + L  +   A          R  A    +H+                           AAR GRHDVVHALA+KGADLDAL+ +GMTPISL
Sbjct:    1 MPWPRREDDAEDRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAKVVGMVRGTPLHVAVATGKEAAARAMMLAGADVNAADRNGDTTLLDLVIGCRGFARDCPIHAAVLVNSWLLGKICCIDETLDQENRSKGGVSWVGAQHPSSITLGHSPDHAYSPNTDRCMERANALSYVLHILGLIPDIQTILSDSLRFCRYTCLYLEHAARQGRHDVVHALAYKGADLDALDDEGMTPISL 299
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BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 6.060e-71
Identity = 120/145 (82.76%), Postives = 127/145 (87.59%), Query Frame = 1 
Query:    1 MPAPREDAEDRVKILGDAADMIFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPG-TGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTD 432
            MPAPREDAEDR K LGDAA +IFKLMCDRATS QWAEWLRAPLEHAAGTANQDLVEKLL+AGADGSAGWRGCDD TLLHAAA   NEEVVTA +RAGAG+DMEAK  G  GGTPLHVAV  G++AAARVL+LAGADVNA D N D
Sbjct:    1 MPAPREDAEDRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 145
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BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 2.490e-57
Identity = 114/216 (52.78%), Postives = 132/216 (61.11%), Query Frame = 1 
Query:   25 EDRVKILGDAADMIFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAARHGRHDVVHALAHKGADLDALNGKGMTPISLAVEGDHV 672
            E+R  IL D  D IFKL+CDRAT  QWAEWLRAPLEHAAGT N+DLV+KLL AGA+  AGWRGC   TLLHAAA   N  V+T+  RAGAG DM+AK+  TG TPL +AVI G+EAAA+ L++AGADVN +D   D  LH                                     A HG  +VV AL  KG DL+ LN KG TP+ LAV GDHV
Sbjct:    5 EERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLDTGHTPLDLAVIGGKEAAAKALIMAGADVNTLDATNDGLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XAWHGLDEVVLALGEKGVDLNCLNSKGETPLRLAVRGDHV 218
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BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 5.400e-50
Identity = 102/216 (47.22%), Postives = 126/216 (58.33%), Query Frame = 1 
Query:   25 EDRVKILGDAADMIFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAARHGRHDVVHALAHKGADLDALNGKGMTPISLAVEGDHV 672
            E+R  IL D  D  FKL+ DRAT  QWAEWLRAPLEHAA T N+DLV+KLL AGA+G AGWRGC   TLLHAAA   N +V+T    AGAG+DM+AK   TG TPL +AVI G+EAAA+ L++AGA+VN +D   D                                         A +G  +VV AL  KG DL+ +N +G  P+ +A+ GDHV
Sbjct:   47 EERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAKALDTGHTPLDLAVIGGKEAAAKALIMAGANVNMLDATNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XACYGLDEVVLALVQKGVDLNCVNTRGEIPLCVALRGDHV 260
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BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.380e-41
Identity = 92/203 (45.32%), Postives = 123/203 (60.59%), Query Frame = 1 
Query:   64 IFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAARHGRHDVVHALAHKG-ADLDALNGKGMTPISLAVEGDH 669
            IFKL+   AT  QWAEWLRAPLEHAA   N  LVE+LL AGA+G AGWRGC   T+L AAA   N +VV   + +G   D+   +  +  + LHVA + G EAAA+ L++AGADVN VD   D  + L + V G    +   LL+ GA P +R  +   P+H+AA  G + VV  L      D+DAL+ +G++P+ +A EG H
Sbjct:   17 IFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPG-DACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGH 218
[Close]
BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 6.050e-37
Identity = 74/132 (56.06%), Postives = 92/132 (69.70%), Query Frame = 1 
Query:   25 EDRVKILGDAADMIFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVD 420
            +DR   L    DMI  L+CD AT  QW +WLR PLEHAAGT N  LVEKLL+ GA+ SAGWRGCD  TL+HA A   +E+V++   RAGAG  +  + P +G TPLH+AV  G+ AA +VL+LAGADVN +D
Sbjct:    5 QDRKSTLHGTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRTLMHAGAEGGSEQVISMLTRAGAGKYINDQAPLSGLTPLHLAVSGGKLAATKVLMLAGADVNRLD 136
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BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 1.300e-35
Identity = 82/172 (47.67%), Postives = 108/172 (62.79%), Query Frame = 1 
Query:   64 IFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTDT-PLHLAIGVLGVDARIAQDLLLSGANPKA---RGFAHDCPIHVAARHG 567
            IFK++ + AT  QWA WLRAPLEHAA + N +LV++LL+AG DG AGWRGC   +LL AAA   N  V++A ++AG G D+      TG + L+ +V+   EAAAR L+LAGADVN VD      PL  A+   G D  +  +LL++GANP       F H  P+H AA+ G
Sbjct:   15 IFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKA-GCDDLVG-NLLMAGANPNVIVRHSFGHGTPLHAAAKQG 184
[Close]
BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: A0A6H5JY41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY41_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.510e-35
Identity = 91/212 (42.92%), Postives = 119/212 (56.13%), Query Frame = 1 
Query:   40 ILGDAADMIFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVDH-NTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAARHGRH-DVVHALAHKGADLDALNGKGMTPISLAVEGDH 669
            +L +A   IFKL+   AT  +WAEWLRAP EHAA   N  LVE+LLEAGADG AGWRGC   T+L AAA   N +VVT  +R+    D+   +  +  + LH+AV    EAAAR L++AGAD + VD  N  TP H+A    G    +  + L  GA P +R      P+H+A   G + DV   L      +DAL+  G +P+ LA    H
Sbjct:    9 LLEEAELEIFKLLSFGATPERWAEWLRAPQEHAAARGNIGLVERLLEAGADGGAGWRGCRSRTMLDAAALGGNADVVTKLLRSECVPDVNVVSVSSKRSALHLAVTWSHEAAARTLMIAGADNHRVDPVNRYTPFHVAAE--GGHDDLVDNYLTGGACPNSRSRVGRTPLHLADGLGNNRDVSALLGDANTHMDALDNDGFSPLMLASRNGH 218
[Close]
BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 3.510e-35
Identity = 87/208 (41.83%), Postives = 112/208 (53.85%), Query Frame = 1 
Query:   64 IFKLMCDRATSGQWAEWLRAPLEHAAGTANQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAXXXNEEVVTAFIRAGAGDDMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKARGFAHDCPIH---------VAARHGRHDVVHALAHKGADLDALNGKGMTPISLAVE 660
            +FKL+   A+  QWAEWLR PLEHAA   N +LVE+LL+AGAD  AGWRGC   TLL AAA   N +V++A IR GAG D+   T  +  + LH A   G EAAA+ LVL GADVN  D      + L+  + G   ++  DL + GA P  R    DC +          +A R G   +V  L   GAD         +P+ +A E
Sbjct:   17 VFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSSRRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSV-LSQAIQGSHTQLVNDLPIGGARPNIRD---DCGLGKTTYVTTFMLAVRRGHLAIVETLLEAGADCSLRQWADYSPLDVAAE 220
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.824.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQP2_ECTSI3.070e-14193.30Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JXY4_9PHAE1.400e-7252.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQP1_ECTSI6.060e-7182.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2A3_ECTSI2.490e-5752.78Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LHQ7_ECTSI5.400e-5047.22F-box domain and ankyrin repeat protein n=1 Tax=Ec... [more]
A0A6H5K1F4_9PHAE1.380e-4145.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM65_ECTSI6.050e-3756.06Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
D7FXA8_ECTSI1.300e-3547.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JY41_9PHAE1.510e-3542.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNQ1_9PHAE3.510e-3541.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig101contigEcto-sp6_S_contig101:620742..621748 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score410.6
Seed ortholog evalue6.6e-112
Seed eggNOG ortholog2880.D7FQP2
Model size945
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
Exons2
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Cds size945
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348735.000974-CDS-Ecto-sp6_S_contig101:620741..6216391682348735.000974-CDS-Ecto-sp6_S_contig101:620741..621639Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig101 620742..621639 +
1682348735.0099673-CDS-Ecto-sp6_S_contig101:621701..6217481682348735.0099673-CDS-Ecto-sp6_S_contig101:621701..621748Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig101 621702..621748 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig101.824.1prot_Ecto-sp6_S_contig101.824.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig101 620742..621748 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig101.824.1

>prot_Ecto-sp6_S_contig101.824.1 ID=prot_Ecto-sp6_S_contig101.824.1|Name=mRNA_Ecto-sp6_S_contig101.824.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=315bp
MPAPREDAEDRVKILGDAADMIFKLMCDRATSGQWAEWLRAPLEHAAGTA
NQDLVEKLLEAGADGSAGWRGCDDNTLLHAAAGGGNEEVVTAFIRAGAGD
DMEAKTPGTGGTPLHVAVIRGQEAAARVLVLAGADVNAVDHNTDTPLHLA
IGVLGVDARIAQDLLLSGANPKARGFAHDCPIHVAARHGRHDVVHALAHK
GADLDALNGKGMTPISLAVEGDHVSTVKVLLAAGADAKGQMDRLKTALHV
AAECNKSGAIPALIEAGADIEARMSLGRSPLWYAAWKGSCAAMLVLLQLG
PCRRRGSASEMGCR*
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mRNA from alignment at Ecto-sp6_S_contig101:620742..621748+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig101.824.1 ID=mRNA_Ecto-sp6_S_contig101.824.1|Name=mRNA_Ecto-sp6_S_contig101.824.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1007bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:620742..621748+ (Ectocarpus species6 EcLAC_371)
ATGCCAGCGCCAAGAGAAGACGCAGAAGACCGTGTCAAAATCCTGGGGGA
TGCAGCAGACATGATCTTCAAACTCATGTGCGATAGAGCGACATCGGGAC
AGTGGGCGGAGTGGCTGAGGGCCCCTCTGGAGCATGCAGCAGGCACGGCC
AACCAAGACTTGGTGGAGAAGTTGTTGGAAGCTGGAGCAGACGGGAGTGC
GGGCTGGCGGGGTTGTGATGACAATACTTTGCTGCATGCGGCTGCCGGGG
GCGGCAACGAGGAGGTGGTGACGGCTTTCATCAGGGCTGGCGCTGGAGAT
GACATGGAGGCCAAAACCCCGGGCACCGGAGGGACTCCACTCCATGTTGC
CGTTATAAGGGGACAGGAGGCTGCGGCACGGGTGCTGGTGCTTGCTGGGG
CCGATGTGAATGCGGTGGACCACAATACCGACACTCCCCTTCATCTTGCC
ATCGGAGTATTAGGAGTTGATGCCCGCATCGCGCAAGACCTTTTGCTCAG
TGGAGCCAATCCCAAAGCCCGAGGTTTCGCACATGACTGCCCTATCCATG
TCGCCGCTCGCCATGGTCGACATGATGTTGTGCATGCCTTGGCCCACAAG
GGGGCGGATCTGGACGCTCTGAATGGTAAAGGCATGACCCCTATCAGTCT
TGCGGTGGAAGGAGATCATGTTTCGACAGTGAAGGTTCTGCTGGCTGCCG
GTGCCGATGCGAAGGGTCAGATGGACCGTTTAAAGACCGCCTTGCATGTT
GCCGCCGAGTGCAACAAATCAGGCGCCATCCCAGCGCTCATCGAAGCCGG
GGCCGACATTGAAGCTCGAATGTCGCTTGGACGGTCACCACTTTGGTACG
CGGCCTGGAAGGGCTCTTGCGCTGCCATGCTCGTTCTCCTACAACTGGGT
GCCGACGCGAACAGCCACGACGAAATTGGATGGACTTGCTTGCACGCCGC
GTCCCAAAAGGGCCATGCCGACGCCGCGGATCTGCTTCTGAGATGGGGTG
CAGATGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:620742..621748+

>mRNA_Ecto-sp6_S_contig101.824.1 ID=mRNA_Ecto-sp6_S_contig101.824.1|Name=mRNA_Ecto-sp6_S_contig101.824.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=945bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:620742..621748+ (Ectocarpus species6 EcLAC_371)
ATGCCAGCGCCAAGAGAAGACGCAGAAGACCGTGTCAAAATCCTGGGGGA
TGCAGCAGACATGATCTTCAAACTCATGTGCGATAGAGCGACATCGGGAC
AGTGGGCGGAGTGGCTGAGGGCCCCTCTGGAGCATGCAGCAGGCACGGCC
AACCAAGACTTGGTGGAGAAGTTGTTGGAAGCTGGAGCAGACGGGAGTGC
GGGCTGGCGGGGTTGTGATGACAATACTTTGCTGCATGCGGCTGCCGGGG
GCGGCAACGAGGAGGTGGTGACGGCTTTCATCAGGGCTGGCGCTGGAGAT
GACATGGAGGCCAAAACCCCGGGCACCGGAGGGACTCCACTCCATGTTGC
CGTTATAAGGGGACAGGAGGCTGCGGCACGGGTGCTGGTGCTTGCTGGGG
CCGATGTGAATGCGGTGGACCACAATACCGACACTCCCCTTCATCTTGCC
ATCGGAGTATTAGGAGTTGATGCCCGCATCGCGCAAGACCTTTTGCTCAG
TGGAGCCAATCCCAAAGCCCGAGGTTTCGCACATGACTGCCCTATCCATG
TCGCCGCTCGCCATGGTCGACATGATGTTGTGCATGCCTTGGCCCACAAG
GGGGCGGATCTGGACGCTCTGAATGGTAAAGGCATGACCCCTATCAGTCT
TGCGGTGGAAGGAGATCATGTTTCGACAGTGAAGGTTCTGCTGGCTGCCG
GTGCCGATGCGAAGGGTCAGATGGACCGTTTAAAGACCGCCTTGCATGTT
GCCGCCGAGTGCAACAAATCAGGCGCCATCCCAGCGCTCATCGAAGCCGG
GGCCGACATTGAAGCTCGAATGTCGCTTGGACGGTCACCACTTTGGTACG
CGGCCTGGAAGGGCTCTTGCGCTGCCATGCTCGTTCTCCTACAACTGGGG
CCATGCCGACGCCGCGGATCTGCTTCTGAGATGGGGTGCAGATGA
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