mRNA_Ecto-sp6_S_contig101.819.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match: A0A6H5JS20_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS20_9PHAE) HSP 1 Score: 1011 bits (2613), Expect = 0.000e+0 Identity = 566/723 (78.28%), Postives = 573/723 (79.25%), Query Frame = 1
Query: 1 MAQQVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEA---MPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAKDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTDYEYEVSVPATVDTGSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDVSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSTGPNGDGGAPPVITAVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRPLQSTGPQDGGPPLAGSFLRPSGSGGASAAGPAGAAGGVDGGQWSLRGMLPAWSREQPSKPGDGS---------------------------------------------------------------------------------------------------TLRQAPGSSFGGGGSSRGGSAWTPDMSRGSGASASSSPPGNLLGAGGAVPTPSPPREELAGSGGTSNGNSGRGPTDRPAGGGLFSAAGFGGENAVFPVSSGGSSMAASPAWPSEQSNARQGRAAGAEGRARAGESSGGRNLAVPTFSSSLDTGARLTSEVGRSGGTFVGTTTLGESGDHHGFEEEDGEEEENPFA 1863
MAQQVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEA +PGSAGTTNLFNLVAGRVDIPFSMKKKSPTA+DNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNT+YEYEVSVPATVDTGSRV GVTWYEVHTMRKADSKGTLVHRRFRDF+ALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGD+SFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGS GPNGDGGAPPVIT+VLGNGRSPPGVC GDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGR L STGPQDGGP LAGSFLRPSGSGGASA GGQW LRGMLPAWSREQPSKPGDGS TLRQAPGSSFG AW PD SRGSG S SSSPPGN+LGA GAVPTP REELAGSG TSNGNS RGPTDRPA GGLFSAAG GGENA FP SSGGSSMAASPAWPSEQSNA G AAGAEGR R GESSGGRNLAVPTFSSSLDTGAR TSEVGRSGGTFVGTTTLGES DHHGFEEEDGEEEENPFA
Sbjct: 1 MAQQVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAKEEVPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAEDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTEYEYEVSVPATVDTGSRVRGVTWYEVHTMRKADSKGTLVHRRFRDFHALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSAGPNGDGGAPPVITSVLGNGRSPPGVCSGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRQLPSTGPQDGGPSLAGSFLRPSGSGGASAXXXXXXXXXXXGGQWRLRGMLPAWSREQPSKPGDGSALAPGGSAAPGREWNPHENPRTRIGNGVGRGGAVGPFGNGTGAAAAGRTNPANSSLFGGDATAGASGGGMGGAAKKESLFDSWRSPRAAXXXXXXXXXGTLRQAPGSSFGXXXXXXXXXAWMPDTSRGSGTSTSSSPPGNMLGAAGAVPTPPTSREELAGSGSTSNGNSVRGPTDRPARGGLFSAAGSGGENAGFPGSSGGSSMAASPAWPSEQSNAPLGGAAGAEGRVRGGESSGGRNLAVPTFSSSLDTGARFTSEVGRSGGTFVGTTTLGESDDHHGFEEEDGEEEENPFA 723
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match: D8LMZ7_ECTSI (PX domain containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ7_ECTSI) HSP 1 Score: 680 bits (1755), Expect = 3.200e-242 Identity = 348/355 (98.03%), Postives = 351/355 (98.87%), Query Frame = 1
Query: 211 MKKKSPTAKDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTDYEYEVSVPATVDTGSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDVSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSTGPNGDGGAPPVITAVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRPLQSTGPQDGGPPLAGSFLRPSGSGGASAAGPAGAAGGVDGGQWSLRGMLPAWSREQPSKPGDG 1275
MKKKSPTA+DNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTDYEYEVSVPATVDTGSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGD+SFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGS GPNGDGGAPPVIT+VLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGR L ST PQDGGPPLAGSFLRPSGSGGASAAGPAGAAGGVDGGQWSLRGMLPAWSREQPSKPGDG
Sbjct: 1 MKKKSPTAEDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTDYEYEVSVPATVDTGSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSAGPNGDGGAPPVITSVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRQLPSTAPQDGGPPLAGSFLRPSGSGGASAAGPAGAAGGVDGGQWSLRGMLPAWSREQPSKPGDG 355
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match: A0A835YSM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM5_9STRA) HSP 1 Score: 233 bits (593), Expect = 1.480e-64 Identity = 137/343 (39.94%), Postives = 196/343 (57.14%), Query Frame = 1
Query: 16 SILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAMPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAKDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTDYEYEVSVPATVDT----GSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDVSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAG---STGPNGDGGAPP---VITAVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPI 1014
S+ GE+NR+W +DS G +H+L+L HDC++GARA +LDY + SAGT+N NL+ G I F +K + G+L I R G+ G+ Y CEV+G+ + +TTS V N ++E++V +P++V G VTWY + R D T VHRR+ DF L +Q + +MKGHHL SLP P K L + D +F+E RR L+ YL+TLL++PHV LD+TRAFLG+VG+LRE R+ V+GG G GGAG + GDG + P + A L G +P GV GD L +V G + E SL + + +P ++H + +
Sbjct: 90 SVFSGEINRHWEFLDSAGGRHVLSLIHDCVSGARACLLDYAELKDSAGTSNCLNLLFGAAKIAFEVKATG----EWGKLEIRRSGILGYQYRCEVDGRAIRETTSKVNNQEHEFDVRIPSSVQACAYKGGDQPNVTWYLLRVRRLRDGACTEVHRRYTDFEMLHQQCDGMMKGHHLSDSLPPLPCKSPLL--DRSDAAFIESRRAELQAYLRTLLRVPHVGGLDTTRAFLGLVGDLRE---------------RSFVVSGGAAGGGGAGFALTADVQGDGLSDPHGFLTVAQLLRG-APAGVAVGDMLLRVGGATIEGKSLLQVTERLEKMPQPYLVHLISAV 410
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match: A0A7S2DHE0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHE0_9STRA) HSP 1 Score: 212 bits (540), Expect = 7.000e-59 Identity = 131/364 (35.99%), Postives = 195/364 (53.57%), Query Frame = 1
Query: 7 QQVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAMPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAKDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQN-------TDYEYEVSV-------PATVDTGSRVS-----------------GVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDVSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSTGPNGDGGAPPVITAVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFL 1005
Q VS+L GEVNR+W D G H ++L+H +TGARAAMLDYE +PGS GT+++F+ G IPFS+ S + G L+I R G+ GF Y C V G++V + T +V T +++V+ PA +D G VS V WY + +R++D T VHRRFRDF L Q+++ +GHHL+SSLP+ P K+ K +H D +F+EER+ LE +++ L+++PHV + ST FLG +LRE S+ + +++G +L +A+ D P + +V G+ + + PGD + K+NG ST M E S+ RP + HFL
Sbjct: 10 QMVSVLSGEVNRSWLFPDQDGRVHEVSLYHHTVTGARAAMLDYEELPGSLGTSSMFHTTHG---IPFSVSSTSGVITE-GSLNIHRHGVFGFRYSCLVAGRVVPECTLMVDRKTAGNDVTPQQHDVTQHGGLLPSPAIMDAGVVVSIDDXXXXXXXXXXXXELSVAWYSLRVVRRSDQATTTVHRRFRDFVELASQLQASFQGHHLQSSLPQPPRKEFKYLKDHRDPAFLEERKHHLEIFMRRLVEVPHVLHVSSTLTFLGFSNHLREMSLIFTTEKIGVRLSKAT-------------------DSDFPATVESVEGHQQGRHEIRPGDIVSKINGHSTAFMKFEEVVRSIQTIPRPFVCHFL 350
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match: A0A4D9CLT8_9STRA (PX domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLT8_9STRA) HSP 1 Score: 184 bits (468), Expect = 5.430e-46 Identity = 124/365 (33.97%), Postives = 184/365 (50.41%), Query Frame = 1
Query: 10 QVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAMPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAKDNGRLSILRRGLTGFSYECEVNGKLVLDTTSVVQNTDYE-YEVSVPATVDT-GSRVSGVTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDVSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSTGPNGDGGAPPVITAV--LGNGRSPPGVCPGDRLFKVNGDS-TELMSLEAAWSSVARATRPVMLHFLGPILRMDSTLAPLPEAFLRHRTPPGRPL 1089
+ ++L GEV+R+W + G KH++ L+HD +TG R+ + E +PGS G++ F+ A ++ + G + I + GL F Y C VNG+ + T + + D E + +++ + S+ VTWYE+ R +D TLVHRR+R+F L EQV + KGHHLRSSLP PG++ KL +H D +FVEERR LE L LL +PHV + + FLG L+E SV + ++LG + R + V + V+T V G G V GD L KV G+ ++ + V+R RP+++HFL + R S FL PPG PL
Sbjct: 3 RTNVLQGEVHRSWVWLSPAGAKHVIDLWHDTVTGVRSVAVGMEEVPGSMGSSPFFSTEAHHINFTVGQDQC------RGMVIIEKAGLFSFRYTCVVNGRPLKATLQGLADEDEERFNIAILGAANAYSSKEKSVTWYELTVTRGSDGARTLVHRRYREFVCLFEQVHAAFKGHHLRSSLPELPGRQLKLLVDHNDTAFVEERRLLLETALGKLLSVPHVGAMVPVQVFLGFFDRLKEHSVIFTQRDLGLSITR-TVVPEESI------------------VVTRVKEAGPGGQKSRVMVGDTLSKVGGEPVSKFGGFDGVAFQVSRGLRPIVIHFLEAVDRNPS------HDFL----PPGEPL 332
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match: A0A7S3M5K7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M5K7_9STRA) HSP 1 Score: 177 bits (449), Expect = 3.260e-44 Identity = 110/337 (32.64%), Postives = 178/337 (52.82%), Query Frame = 1
Query: 13 VSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAMPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAKDNGRLSILRRGLTGFSYECEVNGKLVLDTTS-VVQNTDYEYEVSVPATVDTGSRVSG--VTWYEVHTMRKADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDVSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEVAGGKLGVGGAGSTGPNGDGGAPPVITAVLGNGRSPPGVCPGDRLFKVNGDSTELMSLEAAWSSVARATRPVMLHFLGPI 1014
VS+ +G++ R W + G +KH+L L+HD ++G R+AMLDY+ + GS G ++L L+ + F + P G + I R G T F Y C +N + + + T V +N D ++ ++ TV T S + WY V T R D + VHRRFR+F L Q++ MKGHH+R LP P K K +T+H D SF+++R LE++L + +PHV + +AFLG++ +RE+S++++ LG L G+ G+ P + ++ GV PGD+L +VNG + + AA + + RP+++HF+ I
Sbjct: 16 VSVFEGQLTRTW-FYEHGEKKHVLNLYHDTISGVRSAMLDYQEIRGSLGNSSL--LMDSKGHRIFFTIENLP-----GYIEIKRSGWTSFVYSCCINDRDIKEATQGVPENQDVVFKPTILDTVFTVDDQSEFQIAWYVVKTTRITDGATSTVHRRFREFAELNSQIKQNMKGHHMRDVLPALPEKPLKQFTDHHDPSFIQDRCIKLERFLIAMTSIPHVGNMVCMKAFLGIMDQVREYSLAFQAPTLGLSLLPRDR----------------QGEPGSSPCVVGMIQKPEVCQGVLPGDQLSRVNGVPLQGATFAAAVARIKSTPRPMIVHFIQVI 328
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match: A0A7S2UVB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVB3_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.460e-15 Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = 1
Query: 13 VSILDGEVNRNWHLVD-SGGEK-HLLTLFHDCMTGARAAMLDYEAMPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAKDNGRLSILRRGLTGFSYECEVNGKLVLDT 324
VS+ GE+NR W VD GG+K H++TL+HD +TG R AM+DYE + GS GT+++ +G V+IPF + GR+ I + GL GF YEC V +++T
Sbjct: 2 VSLWSGELNRTWRFVDPEGGDKEHVVTLYHDTITGVRCAMMDYEEIQGSMGTSSVLMSSSG-VNIPFIAG-----GRHIGRIHIAKDGLLGFRYECWVGNTRLVET 101
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match: A0A6T9YST3_BIGNA (Hypothetical protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A6T9YST3_BIGNA) HSP 1 Score: 86.7 bits (213), Expect = 2.640e-15 Identity = 75/265 (28.30%), Postives = 109/265 (41.13%), Query Frame = 1
Query: 1 MAQQVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAMPGSAGTTNLFNLVAGRVDIPFSMKKKSPTAKDNGRLSILRRGLTGFSYECEVNGK----LVLDTTSVVQNTDYEYEVSVPATVDTGSRVSGVTWYEVHTMR--KADSKGTLVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDVSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGMVGNLREFSVSWEGKELGAKLKRASEV 777
M V L G V RNW +D GGE H + L H T + LD E + T + P S K L+ + GF+Y+C +G+ LV DT ++ +P + S S + +Y+V + ++ +RF DF L V S GH L S+LP P K KLWT+H + SFV++RR L +YL L + V F +F V E E + K A+++
Sbjct: 1 MGNSVGTL-GWVIRNWR-IDVGGETHWIQLRHYTPTASFELFLDGEEVASERKVTKME---------PISFSIGGADGKVTPSLATYSQITKGFTYKCTFDGQKIPELVFDTQQPESLCEHIKARLLPCAMIRKSGESKIVYYKVEVTNGDPLQKETYVLKKRFSDFEKLDHLVRSSFSGHQLMSNLPPKPSKSVKLWTDHLEKSFVQQRRGELNRYLTKLFNVKKVCANPDFANFFRKPTEEDKFHVDEETDEPDSSKKEAAKI 254
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Match: A0A7S0CUY1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CUY1_9EUKA) HSP 1 Score: 57.0 bits (136), Expect = 4.590e-6 Identity = 27/78 (34.62%), Postives = 47/78 (60.26%), Query Frame = 1
Query: 466 RRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDVSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFLGM 699
+RF FY ++ K + LP+FP + SK++T+H D F+E+RRK L++++K L ++P +S + FLG+
Sbjct: 67 KRFNAFYGFYRKLSKDFK----KCGLPKFPPRHSKVFTDHNDPVFIEQRRKKLDKFMKELFKIPGMSNQECVLDFLGI 140 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.819.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.819.1 >prot_Ecto-sp6_S_contig101.819.1 ID=prot_Ecto-sp6_S_contig101.819.1|Name=mRNA_Ecto-sp6_S_contig101.819.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=622bp MAQQVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAMPGback to top mRNA from alignment at Ecto-sp6_S_contig101:536422..545679+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig101.819.1 ID=mRNA_Ecto-sp6_S_contig101.819.1|Name=mRNA_Ecto-sp6_S_contig101.819.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9258bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:536422..545679+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:536422..545679+ >mRNA_Ecto-sp6_S_contig101.819.1 ID=mRNA_Ecto-sp6_S_contig101.819.1|Name=mRNA_Ecto-sp6_S_contig101.819.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1866bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:536422..545679+ (Ectocarpus species6 EcLAC_371)back to top |