prot_Ecto-sp6_S_contig101.816.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig101.816.1
Unique Nameprot_Ecto-sp6_S_contig101.816.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length362
Homology
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BLAST of mRNA_Ecto-sp6_S_contig101.816.1 vs. uniprot
Match: D8LMZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMZ5_ECTSI)

HSP 1 Score: 608 bits (1567), Expect = 7.690e-218
Identity = 352/362 (97.24%), Postives = 355/362 (98.07%), Query Frame = 0 
Query:    1 MAAVGESEDNKRHQKFILPVVSSPSNFGPSSRHGFPSEPATPKSSVLVQGRAGGPVDRYRVASKKLCRVASVFGWAAVVIGAGETALGAVVFSKWRREGGWWAGVLAVMLGMAGTGITADTPVGTPLVTRLVFLGVASLITSLVTALALDGAKWLSIKDVEMCASDVRSVCQECTCSSSNLLWDMCFPPLNGSCGGIESAAAPLLASSVVLLALALVSAVLLATGIKVKFLGGGVEVGGEEARPNPAKTPGKRRAPYKCVDGAEPPTPADVLQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KESDTAPTAKREFLTGAEPWAVGYVDRLAGGGNKKRRDELNSNPGKKDQGDGEDVSQ 361
            MAAVGE EDNKRHQKF+LPVVSSPSN GPSSRHG PSEPATPK+SVLVQGRAGGPVDRYRVASK+LCRVASVFGWAAVVIGAGETALGAVVFSKWRREGGWWAGVLAVMLGMAGTGITADTPVGTPLVTRLVFLGVASLITSLVTALALDGAKWLSIKDVEMCASDVRSVCQECTCSSSNLLWDMCFPPLNGSCGGIE AAAPLLASSVVLLALALVSAVLLATGIKVKFLGGGVEVGGEEARPNPAKTPGKRRAPYKCVDGAEPPTPADVLQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KESDTAPTAKREFLTGAEPWAVGYVDRLAGGGNKKRRDELNSNPGKK Q DGEDVSQ
Sbjct:    1 MAAVGEGEDNKRHQKFVLPVVSSPSNLGPSSRHGLPSEPATPKASVLVQGRAGGPVDRYRVASKRLCRVASVFGWAAVVIGAGETALGAVVFSKWRREGGWWAGVLAVMLGMAGTGITADTPVGTPLVTRLVFLGVASLITSLVTALALDGAKWLSIKDVEMCASDVRSVCQECTCSSSNLLWDMCFPPLNGSCGGIEFAAAPLLASSVVLLALALVSAVLLATGIKVKFLGGGVEVGGEEARPNPAKTPGKRRAPYKCVDGAEPPTPADVLQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKESDTAPTAKREFLTGAEPWAVGYVDRLAGGGNKKRRDELNSNPGKKGQDDGEDVSQ 362
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMZ5_ECTSI7.690e-21897.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 277..297
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 131..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..119
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..98
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 150..199
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..130
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 224..361
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..71
NoneNo IPR availableTMHMMTMhelixcoord: 127..149
NoneNo IPR availableTMHMMTMhelixcoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 100..117
NoneNo IPR availableTMHMMTMhelixcoord: 204..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig101contigEcto-sp6_S_contig101:503241..508417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig101.816.1mRNA_Ecto-sp6_S_contig101.816.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig101 503241..511766 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig101.816.1 ID=prot_Ecto-sp6_S_contig101.816.1|Name=mRNA_Ecto-sp6_S_contig101.816.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=362bp
MAAVGESEDNKRHQKFILPVVSSPSNFGPSSRHGFPSEPATPKSSVLVQG
RAGGPVDRYRVASKKLCRVASVFGWAAVVIGAGETALGAVVFSKWRREGG
WWAGVLAVMLGMAGTGITADTPVGTPLVTRLVFLGVASLITSLVTALALD
GAKWLSIKDVEMCASDVRSVCQECTCSSSNLLWDMCFPPLNGSCGGIESA
AAPLLASSVVLLALALVSAVLLATGIKVKFLGGGVEVGGEEARPNPAKTP
GKRRAPYKCVDGAEPPTPADVLQRRRRQREQQQQEEEGRTLEEVEEAAGG
EEERKESDTAPTAKREFLTGAEPWAVGYVDRLAGGGNKKRRDELNSNPGK
KDQGDGEDVSQ*
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