mRNA_Ecto-sp6_S_contig101.813.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_Ecto-sp6_S_contig101.813.1 vs. uniprot
Match: D8LMZ2_ECTSI (COG2350: Uncharacterized protein conserved in bacteria n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ2_ECTSI)

HSP 1 Score: 1024 bits (2648), Expect = 0.000e+0
Identity = 513/541 (94.82%), Postives = 515/541 (95.19%), Query Frame = 1

Query:    1 MVRIATNLGHRECITDID---RAGRAPPASARWTEGGALAGLCAASLSVTASLRPLRVALTAGIAPGASPCTTDGGDGGFRAVEGGRGVGGWRLHGATRRRSGCLQAKNTPLGDGKGDDLLRLKNVAAAVPEEDRVDDHSDEAMRRLMFDMDPDSKDKGPMYFGDAGMYTDEVNHVKYPEEVRFPQSYLAFCVDREETEDEDKNYVTWGVRAKAHWEHVKWASRIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKASEGALRLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGSAKLREKNNDAHLEYYERTRRCIGEGPVLSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSGIGLVRANRIDPMRDMMAKEGLDRECEYPVKFGKYDLFENMKWLKTEVEKKQEQQYMEHRLKLYQQRDRRIEREEINEGALFRPGVYVYMGKRTETEWYDYWPTKAGPDADAAGEEFYTMDACYPPVDHFEDDLD 1614
            MVR+A NLGHRECITDID    AG A PA+ARWTEG ALAGLCAASLSV     P R AL  G    A PCTTDGGDGGFRAVEGGRGVGGWR HGATRRRSGCLQAKNTPLGDGKGDDLLRLKNVAAAVPEEDRVDDHSDEAMRRLMFDMDPDSKDKGPMYFGDAGMYTDEVNHVKYPEEVRFPQSYLAFCVDREETEDEDKNYVTWGVRAKAHWEHVKWA RIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTK  EGALRLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGSAKLREKNNDAHLEYYERTRRCIGEGPVLSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSGIGLVRANRIDPMRDMMAKEGLDRECEYPVKFGKYDLFENMKWLKTEVEKKQEQQYMEHRLKLYQQRDRRIEREEINEGALFRPGVYVYMGKRTETEWYDYWPTKAGPDADAAGEEFYTMDACYPPVDHFEDDLD
Sbjct:    1 MVRMAINLGHRECITDIDCERAAGCALPATARWTEGRALAGLCAASLSVG----PTR-ALPPGGGGAAWPCTTDGGDGGFRAVEGGRGVGGWRSHGATRRRSGCLQAKNTPLGDGKGDDLLRLKNVAAAVPEEDRVDDHSDEAMRRLMFDMDPDSKDKGPMYFGDAGMYTDEVNHVKYPEEVRFPQSYLAFCVDREETEDEDKNYVTWGVRAKAHWEHVKWA-RIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTK--EGALRLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGSAKLREKNNDAHLEYYERTRRCIGEGPVLSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSGIGLVRANRIDPMRDMMAKEGLDRECEYPVKFGKYDLFENMKWLKTEVEKKQEQQYMEHRLKLYQQRDRRIEREEINEGALFRPGVYVYMGKRTETEWYDYWPTKAGPDADAAGEEFYTMDACYPPVDHFEDDLD 533

[Close]

BLAST of mRNA_Ecto-sp6_S_contig101.813.1 vs. uniprot
Match: A0A6H5JNB6_9PHAE (YCII domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB6_9PHAE)

HSP 1 Score: 786 bits (2030), Expect = 8.630e-278
Identity = 398/490 (81.22%), Postives = 402/490 (82.04%), Query Frame = 1

Query:  403 DHSDEAMRRLMFDMDPDSKDKGPMYFGDAGMYTDEVNHVKYPEEVRFPQSYLAFCVDREETEDEDKNYVTWGVRAKAHWEHVKWASRIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKAS------------------------EGALRLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGSAKLREKNNDAHLEYYERTRR-CIGEGPVLSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSGIGLVRANRIDPMRDMMAKEGLDRECEYPVKFGKYDLFENMKWLKTEVEKKQEQQYMEHRLKLYQQR-------------------------------------------------------------DRRIEREEINEGALFRPGVYVYMGKRTETEWYDYWPTKAGPDADAAGEEFYTMDACYPPVDHFEDDLD 1614
            DHSDEAMRRLMFDMDPDSKDKGPMYFGDAGMYTDEVNHVKYPEEVRFPQSYLAFCVDREETEDEDKNYVTWGVRAKAHWEHVKWA RIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKAS                        EGALRLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKG AKLREKNNDAHLEYYE+TRR CIGEGP+LSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSGIGLVRANRIDPMRDMMA+EGLDRECEYPVKFGKYDLFENMKWLKTEVEKKQEQQYMEHRLKLYQQR                                                             DRRIEREE+NEGALFRPGVYVYMGKRTETEWYDYWPTKAGPDADAAGEEFYTMDACYPPVDHFEDDLD
Sbjct:   17 DHSDEAMRRLMFDMDPDSKDKGPMYFGDAGMYTDEVNHVKYPEEVRFPQSYLAFCVDREETEDEDKNYVTWGVRAKAHWEHVKWA-RIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKASAIHLGYFYVLLRKIGSDEAVAGRKEGALRLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGKAKLREKNNDAHLEYYEKTRRRCIGEGPILSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSGIGLVRANRIDPMRDMMAQEGLDRECEYPVKFGKYDLFENMKWLKTEVEKKQEQQYMEHRLKLYQQRCVGGGAVVTSADDTPRWYDGMPSYGGRNVRAGTAVKAPVSAAVEGFSDVWLKAAHTVVVARDRRIEREEVNEGALFRPGVYVYMGKRTETEWYDYWPTKAGPDADAAGEEFYTMDACYPPVDHFEDDLD 505

[Close]

BLAST of mRNA_Ecto-sp6_S_contig101.813.1 vs. uniprot
Match: A0A835ZAP4_9STRA (YCII domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAP4_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.350e-26
Identity = 81/255 (31.76%), Postives = 122/255 (47.84%), Query Frame = 1

Query:  553 YLAFCVDREETEDEDKNYVTWGVRAKAHWEHVKWASRIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKASEGALRLLEEDPYRKSGLFG------TVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGSAKLREKNNDAHLEYYERTRRCIGEGPVLSSDL-AEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSGIGLVRANRIDPMRDMMAKEGLDRECEYP 1296
            YLA C+DR++ +   +       R      HV WA R  +          A +L++R++L+P   R IGN+  I + ++A   AL   E  PY  +GLF          LY +P N     N+ L  +PY  + MD  G+   R     AHL Y       +G  P+L             PVGS++F NA + E AR  A+ DP+  AG+++SV V    +ID+ G    R   +DP+RD++ +EGL  + +YP
Sbjct:   88 YLAVCLDRDDADAFAR------ARCPNMIAHVAWARRSTRVE-----GARARVLFSRALLAPDMQRTIGNLVGIAAASRADAEALWASE--PYTAAGLFAGGGGGAAQLLYAWPRNDHTELNYDLRAYPYAIVAMDANGALPTRRATRPAHLAYLTSLGCVVGAAPLLPLGARGGGGAAGDPVGSVVFVNAESAEAARAIADADPYAAAGVFESVRVYALCDIDVEGTSQARPQTVDPVRDILEREGLTTKDDYP 329

[Close]

BLAST of mRNA_Ecto-sp6_S_contig101.813.1 vs. uniprot
Match: A0A7S2DFL6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFL6_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.200e-18
Identity = 48/170 (28.24%), Postives = 91/170 (53.53%), Query Frame = 1

Query:  709 ILWNRSVLSPSKCRVIGNMFCIRSYTKASEGAL-RLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGSAKLREKNNDAHLEYYERTRRCIGEGPVLSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSGI 1215
            ILW RS+   +   + G   C+  Y  AS   L  L+ +DPY   G+F  + ++R+  N      +   + P++ LC+DK G    R      HLE+ + ++  +  GP+ S++    +  + P+GS +   A + E A   ++ DP+ QAG+++SV ++ ++E+D++G+
Sbjct:   49 ILWERSLYEDNDMYIHG---CVTGYAAASREELDTLMSKDPYITEGVFSDIQVFRWKQNNDPELRFEPKSAPHVFLCLDKPGMLATRTATRPDHLEWLQTSKLVMAAGPIFSAESGAGALEDGPIGSFVCAAADDVESAHAWSKEDPYAQAGIFESVRISHYSEMDVTGL 215

[Close]

BLAST of mRNA_Ecto-sp6_S_contig101.813.1 vs. uniprot
Match: A0A7S0EWI6_9EUKA (Hypothetical protein n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EWI6_9EUKA)

HSP 1 Score: 72.4 bits (176), Expect = 8.740e-10
Identity = 52/161 (32.30%), Postives = 77/161 (47.83%), Query Frame = 1

Query:  736 PSKCRVIGNMFCIRSYTKASEGALRLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGSAKLREKNNDAHLEYYERTRRCIGEGPVLSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSGIG 1218
            P    V+GN+  ++  + A   A    + DP+   G + +++ +R+  +     N       Y   C+DK  S++LRE   DAHL +     R +  G  L S L E       VG+L+F N    EE R  A  DP+NQAGL++SV VA   +  LS  G
Sbjct:  191 PQGSFVLGNLNVVKGSSLADVAAWG--QGDPHDVVGAYASLTTHRWLRSPDPELNLPAPGPCYGVYCLDKPASSELREATRDAHLAWLAEGGR-VHLGGALQSPLGEAVGN---VGTLLFVNGDELEEVRRWATEDPYNQAGLFESVLVAPVTQYALSAAG 345

[Close]

BLAST of mRNA_Ecto-sp6_S_contig101.813.1 vs. uniprot
Match: A0A7S2P7F9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P7F9_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 4.510e-9
Identity = 34/100 (34.00%), Postives = 58/100 (58.00%), Query Frame = 1

Query:  919 PYLALCMDKKGSAK--LREKNNDAHLEYYERTRRCIGEGPVLSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDLSG 1212
            P + L  D+  +    LRE+  + HLEY  R+ + I  GP+  +   +  P++   G+LM FNA +  +A E  E DP   AG+Y+++ V R+N++D++G
Sbjct:   24 PTMLLAFDRPEAMSDGLREEVQNEHLEYLIRSEKIIACGPLHVATQEKSDPKSVAAGTLMIFNAKDRNDAIEFVENDPMAVAGVYETMTVHRYNQLDVTG 123

[Close]

BLAST of mRNA_Ecto-sp6_S_contig101.813.1 vs. uniprot
Match: UPI001F3F6F1B (YciI family protein n=1 Tax=Burkholderia cepacia TaxID=292 RepID=UPI001F3F6F1B)

HSP 1 Score: 59.7 bits (143), Expect = 2.520e-7
Identity = 31/95 (32.63%), Postives = 51/95 (53.68%), Query Frame = 1

Query:  922 YLALCMDKKGSAKLREKNNDAHLEYYERTRRCIGEGP----VLSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFN 1194
            Y+ LC D+ G+  LRE++  AH  Y++     +G+G     V +  L  D   +  +GS M   A +  + +   +GDPF + GLYD VF+ R++
Sbjct:    3 YIRLCFDRPGTTDLREQHRAAHRAYFQPN---LGDGAMPRLVQAGPLCIDDTNDTNLGSFMILEANSLADVQRFHDGDPFTRVGLYDKVFLHRWD 94

[Close]

BLAST of mRNA_Ecto-sp6_S_contig101.813.1 vs. uniprot
Match: A0A840CDM8_9RHOB (YCII domain-containing protein n=2 Tax=Actibacterium TaxID=1433986 RepID=A0A840CDM8_9RHOB)

HSP 1 Score: 59.3 bits (142), Expect = 2.860e-7
Identity = 34/93 (36.56%), Postives = 48/93 (51.61%), Query Frame = 1

Query:  922 YLALCMDKKGSAKLREKNNDAHLEYYERTRRCIGEGPVLSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEI 1200
            +  +C DK G  + R+ N DAHL Y + T      GP L  D A D       GSL+        +A+  AEGDP+ QAGL++SV +  +N +
Sbjct:    4 FAVICKDKPGHLETRKANRDAHLSYLKETGVVTQAGPFL--DEAGDM-----CGSLLILEVGALSDAQAWAEGDPYAQAGLFESVAIQHWNRV 89

[Close]

BLAST of mRNA_Ecto-sp6_S_contig101.813.1 vs. uniprot
Match: A0A4V1EI45_9BURK (YciI family protein n=1 Tax=Burkholderia sp. DHOD12 TaxID=2571746 RepID=A0A4V1EI45_9BURK)

HSP 1 Score: 58.9 bits (141), Expect = 4.700e-7
Identity = 34/98 (34.69%), Postives = 50/98 (51.02%), Query Frame = 1

Query:  922 YLALCMDKKGSAKLREKNNDAHLEYY------ERTRRCIGEGPVLSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNE 1197
            Y+ LC DK G  +LRE     H  Y           R +  GP+  SD A+D+     + S M   A N E+ +   EGDPF +AGLY+ V++ R+++
Sbjct:    3 YIRLCFDKAGQLELRESTRAEHRAYVMPILAPTSVPRLVQGGPLCVSD-ADDTN----IASFMILEADNIEQVKRFHEGDPFTKAGLYEQVYIHRWDK 95

[Close]

BLAST of mRNA_Ecto-sp6_S_contig101.813.1 vs. uniprot
Match: A0A1Z9TJS9_9RICK (YCII domain-containing protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1Z9TJS9_9RICK)

HSP 1 Score: 58.5 bits (140), Expect = 5.190e-7
Identity = 34/93 (36.56%), Postives = 50/93 (53.76%), Query Frame = 1

Query:  922 YLALCMDKKGSAKLREKNNDAHLEYYERTRRCIGEGPVLSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEI 1200
            +  +C+D + S + R  N +AHLEY   T      GP LS    ED      +GSL+   A N EEA   ++ DP+N+AGL+ SV + +F  +
Sbjct:    3 FSVICLDNEKSLEKRLSNXEAHLEYVXGTGVVRYAGPFLSD---EDETM---MGSLIVIEAENKEEALNWSKNDPYNKAGLFQSVKIYKFKHL 89

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig101.813.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig101.813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D8LMZ2_ECTSI	0.000e+0	94.82	COG2350: Uncharacterized protein conserved in bact...	[more]
A0A6H5JNB6_9PHAE	8.630e-278	81.22	YCII domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A835ZAP4_9STRA	1.350e-26	31.76	YCII domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A7S2DFL6_9STRA	3.200e-18	28.24	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
A0A7S0EWI6_9EUKA	8.740e-10	32.30	Hypothetical protein n=2 Tax=Phaeocystis antarctic...	[more]
A0A7S2P7F9_9STRA	4.510e-9	34.00	Hypothetical protein n=1 Tax=Skeletonema marinoi T...	[more]
UPI001F3F6F1B	2.520e-7	32.63	YciI family protein n=1 Tax=Burkholderia cepacia T...	[more]
A0A840CDM8_9RHOB	2.860e-7	36.56	YCII domain-containing protein n=2 Tax=Actibacteri...	[more]
A0A4V1EI45_9BURK	4.700e-7	34.69	YciI family protein n=1 Tax=Burkholderia sp. DHOD1...	[more]
A0A1Z9TJS9_9RICK	5.190e-7	36.56	YCII domain-containing protein n=2 Tax=Alphaproteo...	[more]

ZOOM

x 1

POSITION

0

Pages