Homology
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match:
D7FPN5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN5_ECTSI)
HSP 1 Score: 153 bits (387), Expect = 3.400e-47
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1
Query: 1 MLFGFNLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAMLP 240
MLFGFNLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAMLP
Sbjct: 1 MLFGFNLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAMLP 80
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match:
A0A835YX81_9STRA (Yos1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX81_9STRA)
HSP 1 Score: 84.7 bits (208), Expect = 6.350e-20
Identity = 45/72 (62.50%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 22 LWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAML 237
LW LFK GLL TNAV ILHK+RFLR E D + +S +KNQ +GLI AVAYLRGPLI +N LTC ML
Sbjct: 4 LWSLFKTGLLVTNAVAILHKERFLRPLGWAEPDPALGSSNLKNQAIGLINAVAYLRGPLIAINLLTCTFEML 75
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match:
K8ZAA6_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZAA6_NANGC)
HSP 1 Score: 73.6 bits (179), Expect = 1.640e-15
Identity = 39/72 (54.17%), Postives = 54/72 (75.00%), Query Frame = 1
Query: 22 LWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAML 237
+W L+K+GLL TN V +LH++RFLRKY LD + + + S ++NQVVGL+ AV YL+ PLI LN +T VI +L
Sbjct: 5 IWSLYKSGLLFTNGVAVLHRKRFLRKYGLDVAEVADTTS-IRNQVVGLLNAVQYLKVPLIALNIVTVVIELL 75
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match:
A0A2D4BY06_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BY06_PYTIN)
HSP 1 Score: 68.9 bits (167), Expect = 1.040e-13
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 1
Query: 16 NLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSL 216
+LW F + LL TNAV ILH++RFLRKY D+VD S + ++NQ+VG + AV YLR PLIV+N+L
Sbjct: 2 GVLWGFFLSSLLLTNAVCILHEKRFLRKYGWDKVDPSQGMT-IRNQIVGFLVAVQYLRVPLIVVNAL 67
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match:
A0A067C849_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C849_SAPPC)
HSP 1 Score: 68.6 bits (166), Expect = 1.560e-13
Identity = 35/73 (47.95%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 22 LWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSAS-AMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAML 237
+WKL + LL+ NA+ ILH++RFLR+Y D+++ S S +MKNQVVG + AV YLR PL+V+N + + +L
Sbjct: 4 IWKLIMSSLLSVNALAILHEKRFLRRYGYDQLEASSGGSPSMKNQVVGFLVAVQYLRMPLVVINIVAIFLELL 76
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match:
A0A8K1FQA8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQA8_PYTOL)
HSP 1 Score: 67.0 bits (162), Expect = 6.000e-13
Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 16 NLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNS 213
+LW F + LL TNAV ILH++RFLR Y D++D S + +KNQVVG + AV YLR PLI++N+
Sbjct: 2 GVLWDFFLSSLLLTNAVCILHEKRFLRPYGWDKIDSSQGMT-IKNQVVGFLVAVQYLRVPLIIVNA 66
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match:
A0A3F2RI45_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RI45_9STRA)
HSP 1 Score: 65.9 bits (159), Expect = 1.710e-12
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 16 NLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSL 216
+LW F LL TNAV ILH++RFLR + D+VD S + +KNQ+VG + AV YLR PL+V+N+L
Sbjct: 2 GVLWNFFLTSLLLTNAVCILHEKRFLRSHGWDKVDSSQGMT-IKNQIVGFLIAVQYLRFPLMVINTL 67
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match:
K3WSH3_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSH3_GLOUD)
HSP 1 Score: 60.5 bits (145), Expect = 2.290e-10
Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 1
Query: 16 NLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAM 234
+LW LL TNAV ILH++RFL+ Y +V+ S + +KNQVVG + AV YLR PLIV+N+ V+ +
Sbjct: 2 GVLWNFVLTSLLLTNAVCILHEKRFLKPYGWHKVEASEGMT-IKNQVVGFLVAVQYLRVPLIVINAFMIVLEL 73
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match:
A0A0P1A8P8_PLAHL (Immediate early response 3-interacting protein 1-like n=12 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1A8P8_PLAHL)
HSP 1 Score: 60.1 bits (144), Expect = 3.250e-10
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 1
Query: 16 NLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSL 216
+LW LL TNAV ILH++RFLR + +VD S + +KNQ+VG + AV YLR PL+++N+L
Sbjct: 2 GVLWNFVLTSLLLTNAVCILHEKRFLRSHGWHKVDSSQGMT-IKNQIVGFLIAVQYLRFPLMIINTL 67
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Match:
G4ZTT8_PHYSP (AP-3 complex subunit delta n=21 Tax=Phytophthora TaxID=4783 RepID=G4ZTT8_PHYSP)
HSP 1 Score: 60.8 bits (146), Expect = 5.900e-9
Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 16 NLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAML 237
+LW LL TNAV ILH++RFLR + +VD S + +KNQ+VG + AV YLR PL+++N+L ++ +L
Sbjct: 2 GVLWNFVLTSLLLTNAVCILHEKRFLRPHGWHKVDSSQGMT-IKNQIVGFLIAVQYLRFPLMIINTLMILLELL 74
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.802.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 15
0 1 Expect = 3.40e-47 / Id = 100.00 Expect = 6.35e-20 / Id = 62.50 Expect = 1.64e-15 / Id = 54.17 Expect = 1.04e-13 / Id = 55.22 Expect = 1.56e-13 / Id = 47.95 Expect = 6.00e-13 / Id = 53.03 Expect = 1.71e-12 / Id = 52.24 Expect = 2.29e-10 / Id = 46.58 Expect = 3.25e-10 / Id = 47.76 Expect = 5.90e-9 / Id = 44.59 Sequence D7FPN5_ECTSI A0A835YX81_9STRA K8ZAA6_NANGC A0A2D4BY06_PYTIN A0A067C849_SAPPC A0A8K1FQA8_PYTOL A0A3F2RI45_9STRA K3WSH3_GLOUD A0A0P1A8P8_PLAHL G4ZTT8_PHYSP Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.802.1
>prot_Ecto-sp6_S_contig101.802.1 ID=prot_Ecto-sp6_S_contig101.802.1|Name=mRNA_Ecto-sp6_S_contig101.802.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=81bp
MLFGFNLLWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKN back to top mRNA from alignment at Ecto-sp6_S_contig101:339601..340862+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig101.802.1 ID=mRNA_Ecto-sp6_S_contig101.802.1|Name=mRNA_Ecto-sp6_S_contig101.802.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1262bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:339601..340862+ (Ectocarpus species6 EcLAC_371)ATGTTGTTTGGCTTTAACCTGCTGTGGAAGCTCTTCAAGGCTGGGCTGCT
GGCCACCAATGCCGTCACAATTCTCCACAAGCAGCGCTTCTTGAGAAAAT
GTAAGCGAGGCAGGTTACTCCGCGTCTCTCCCGCTGTGTTGCGTATGGAA
CGATGGAATCAGTGGGGCGTGTGCAGTCCACACAGAGCTAACTCAACAAA
GCACGACTTTGCGATAACTAGAGAGAAAGGAACCCACCTCCCCGATAGGA
AGCAGGCTACACCATCCTAAAATAGCCTGATGGGCACGGAAGGCCAGTGG
ACGTCGAACACGGCCGCGGATGCAACAACTGCATCTCGAAGTCGCTTGTA
CAACGACGATACAGCAGTACTGCTGCTATCGATACAGCAGTACTGCTGCT
ATGTGTAGAGGTCGACGGGACGATGTCTCTTTTTTGCTTTGAGCACCGTG
CTGAGCTCTCTGACCTGCATCTTTTCAGATTCTATGATGTTGTCGTCTTC
TATCATGATCGATTTTGGACAAATTGGACTTGGAAACCTGAGCTGCCGCA
CAGCAGGGAGGTAATTATTGTGTAGTTTAGACGGCGTCCTCTTGGACAAT
CAACCCGCTAAAGCTACAGCAGTATCTAGGAGACTTATGTACGTCGAGAC
CGGGTTGGTGAGAAACGCGCAGCACGCTGGCCTACATGGCGAGCTACCCA
TTTGAACCGCGCCACCAGTTACCCTGTTGGAACGTTGGAACCCGCAACAC
CGAGAGTTTCACCTGTGTCTGCTCCCGCAGCTTCTCGCTGCTCCCTCGCG
CAAGCCCTTGAGCGTCCGCACCCCCCCACCCCCCCGGGGGCACTCTCCCT
CACCCTTCATATTTTGCCTCGTTTGCATAGCCTTAACAAGCAGCAAGAGA
CACGTTTCTCTCCTCTTTCTCATCGTTTTTGACGCCCATGTGCGTACGGT
TGCACCTCGCCAATAGTTTGTAGTCTATCCCCCCACCAGCGCAATAACCT
TAGCGAGGATATTTCACTTGGTTATAGTATGGGTTACGGGGTTGTGTGAG
GGCTACAGTAGGTCAGTCCTTCGCCCGACCGACACGAACCCCCCGCGCTC
AACGAACGTGACCTCGCAGATCGGCTCGACGAGGTGGACCACTCGCCATC
GGCCTCGGCGATGAAGAACCAGGTCGTGGGCTTGATCGCGGCGGTGGCGT
ATCTCCGCGGCCCGCTGATCGTCCTCAACTCACTCACCTGCGTCATCGCG
ATGCTCCCATGA back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:339601..340862+
>mRNA_Ecto-sp6_S_contig101.802.1 ID=mRNA_Ecto-sp6_S_contig101.802.1|Name=mRNA_Ecto-sp6_S_contig101.802.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=243bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:339601..340862+ (Ectocarpus species6 EcLAC_371) back to top