mRNA_Ecto-sp6_S_contig101.777.1 (mRNA) Ectocarpus species6 EcLAC_371
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig101.777.1 vs. uniprot
Match: D7G2U3_ECTSI (DUF913 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U3_ECTSI) HSP 1 Score: 780 bits (2015), Expect = 7.170e-270 Identity = 504/558 (90.32%), Postives = 508/558 (91.04%), Query Frame = 1 Query: 1729 MDQLRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQQGFGGMGKPFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKEEGKXXXXXXXXXXXXXKGXXXXXXXXGKAKGTTXXXXXVVATGGGPDRVGEGGAGDDASAAAGGPLADPSPSQKALLFSLLNALSITFQNQTQTHQQVGSDPLLEAFLTAAVMDVFRNSDMFGGVLVALTATLISDVANQDPSTTVAYLLRSGIVDEYLKVLTATPAPPPSSDLLVTVPNVLHALCLTHDGASRVQEANVFPAFFRMLHTPESMHPQSRYPEGNMTSVVGAGLDELMRHVPALRPQCIKALVSSLKELVGKGDELLKRELAGDSSAEVLNERTLMQQYAANFGQLLESALGRPENAKPFADAGGDEVLLSLFSLAVPGPRALLARASCAGXXXXXXXXXXXXXXXXXXX--QHSLANHAASQALTSAMKALGTHDTARLLKRVLVALDRELDRLDAARKAVVEAGG 3396
MDQLRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQ GFGGMGKPFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAXXXXXXXXXXXXXXXXXXX +GK XXXXXXXXXXXXX XXXXXXXXGKA+G XXX GGPLADPSPSQKALLFS+LNALSITFQNQTQTHQQVGSDPLLEAFLTAAVMDVFRNSDMFGGVLVALTATLISDVANQDPSTTVAYLLRSGIVDEYLKVLTATPAPPPSSDLLVTVPNVLHALCLTHDGASRVQEANVFPAFFRMLHTPESMHPQSRYPEGNMTSVVGAGLDELMRHVPALRPQCIKALVSSLKELVGKGDELLKRELAGDSSAEVLNERTLMQQYAANFGQLLESALGRPENAKPFADAGGDEVLLSLFSLAVPGPRALLARASCAGXXXXXXXXXXXXXXXXXXX QHSLANHAASQALTSAMKALGTHDTARLLKRVLVALDRELDRLDAARK +GG
Sbjct: 1 MDQLRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQ-GFGGMGKPFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAXXXXXXXXXXXXXXXXXXXVDDP-----KGKXXXXXXXXXXXXXXXXXXXXXXXXXXXGKARGAPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXGGPLADPSPSQKALLFSVLNALSITFQNQTQTHQQVGSDPLLEAFLTAAVMDVFRNSDMFGGVLVALTATLISDVANQDPSTTVAYLLRSGIVDEYLKVLTATPAPPPSSDLLVTVPNVLHALCLTHDGASRVQEANVFPAFFRMLHTPESMHPQSRYPEGNMTSVVGAGLDELMRHVPALRPQCIKALVSSLKELVGKGDELLKRELAGDSSAEVLNERTLMQQYAANFGQLLESALGRPENAKPFADAGGDEVLLSLFSLAVPGPRALLARASCAGXXXXXXXXXXXXXXXXXXXXXQHSLANHAASQALTSAMKALGTHDTARLLKRVLVALDRELDRLDAARKGGRGSGG 552
BLAST of mRNA_Ecto-sp6_S_contig101.777.1 vs. uniprot
Match: A0A6H5LD86_9PHAE (DUF913 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD86_9PHAE) HSP 1 Score: 756 bits (1953), Expect = 3.060e-257 Identity = 492/586 (83.96%), Postives = 496/586 (84.64%), Query Frame = 1 Query: 1738 LRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQ---------------QGFGGMGKPFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKEEGKXXXXXXXXXXXXXKGXXXXXXXXGKAKGTTXXXXXVV-------ATGGGPDRVGEGGAGDDASAAAGGPLADPSPSQKALLFSLLNALSITFQNQTQTHQQVGSDPLLEAFLTAAVMDVFRNSDMFGGVLVALTATLISDVANQDPSTTVAYLLRSGIVDEYLKVLTATPA---PPPSSDLLVTVPNVLHALCLTHDGASRVQEANVFPAFFRMLHTPESMHPQSRYPEGNMTSVVGAGLDELMRHVPALRPQCIKALVSSLKELVGKGDELLKRELAGDSSAEVLNERTLMQQYAANFGQLLESALGRPENAKPFADAGGDEVLLSLFSLAVPGPRALLARASCAGXXXXXXXXXXXXXXXXXXX-QHSLANHAASQALTSAMKALGTHDTARLLKRVLVALDRELDRLDAARKAVVEAGGMSATVAS 3417
L WVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQ GFGGMGKPFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAA +GK EG XXXXXXXXXXXXX XXXXXXX GK KGTTXXXXX ATGG PD V +GGA DDAS+AAGGPLADPSPSQKALLFSLLNALSITFQNQ VGSDPLLEAFLTAAVMDVFRNSDMFGGVLVALTATLISDVANQDPSTTV YLLRSGIVDEYLKVLTATPA PPPSSDLLVTVPNVLHALCLTHDGASRVQEANVFPA SRYPEGNMTSVVGAGLDELMRHVPALRPQCIKALVSSLKELVGKGDELLKRELAGDSSAEVLNERTLMQQYAANFGQLLESALGRPENAKPFADAGGDEVLLSLFSLAVPGPRALLARASCAGXXXXXXXXXXXXXXXXXXX QHSLANHAASQALTSAMKALGTHDTARLLKRVLVALDRELDRLDAARKAV+EAGGMSA VAS
Sbjct: 9 LLWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQVGLRLCSDCVHMVKGTGFGGMGKPFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAAAAGDNRSGGGCSGMVVDDP--------KGKAEGXXXXXXXXXXXXXXXXXXXXXXXDGKVKGTTXXXXXXXXXXXXXXATGGDPDGV-QGGAEDDASSAAGGPLADPSPSQKALLFSLLNALSITFQNQ------VGSDPLLEAFLTAAVMDVFRNSDMFGGVLVALTATLISDVANQDPSTTVPYLLRSGIVDEYLKVLTATPATPAPPPSSDLLVTVPNVLHALCLTHDGASRVQEANVFPA--------------SRYPEGNMTSVVGAGLDELMRHVPALRPQCIKALVSSLKELVGKGDELLKRELAGDSSAEVLNERTLMQQYAANFGQLLESALGRPENAKPFADAGGDEVLLSLFSLAVPGPRALLARASCAGXXXXXXXXXXXXXXXXXXXXQHSLANHAASQALTSAMKALGTHDTARLLKRVLVALDRELDRLDAARKAVMEAGGMSAAVAS 565
BLAST of mRNA_Ecto-sp6_S_contig101.777.1 vs. uniprot
Match: D7G2U4_ECTSI (DUF908 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U4_ECTSI) HSP 1 Score: 397 bits (1020), Expect = 6.170e-126 Identity = 268/300 (89.33%), Postives = 268/300 (89.33%), Query Frame = 1 Query: 1 MRIRASSGAGGVGQPEPRLSRELEPLKRAILEAKTDAELIAALKLVKGEDEWEEQPDLYDWCDVLDRMDETLETNMLRHPSLLLIQPADHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLCCLNFLAVLMRSCVNKHVFSSAEHLRSLLAAGDDAVAESALRCLMLLTVPPLLHRHQQPELHSMCSIHKDKAVSAELMTLSGGWGGRGQGLGLLACVTGRVEGEAKVSGRYAPSQGTDEAAAAGAEDDADGADDGSSXXXXXXXXXXXXXXXXXESNRAPSPGGYTRFRTIFV 900
MRIRASSGAGGVGQPEPRLSRELEPLKRAILEAKTDAELIAALKLVKGEDEWEEQPDLYDWCDVLDRMDETLETNMLRHPSLLLIQPADHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CCLNFLAVLMRSCVNKHVFSSAEHLRSLLAAGDDAVAESALRCLMLLTVPPLLHRHQQPELHSMCSIHKDKAVSAELMTLSGGWGGRGQGLGLLACVTGRVEGEAK GTDEAAA XXXXXXXXXXXX ESNRAPSPGGYTRFRTIFV
Sbjct: 1 MRIRASSGAGGVGQPEPRLSRELEPLKRAILEAKTDAELIAALKLVKGEDEWEEQPDLYDWCDVLDRMDETLETNMLRHPSLLLIQPADHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCLNFLAVLMRSCVNKHVFSSAEHLRSLLAAGDDAVAESALRCLMLLTVPPLLHRHQQPELHSMCSIHKDKAVSAELMTLSGGWGGRGQGLGLLACVTGRVEGEAK---------GTDEAAAXXXXXXXXXXXX-XXXXXXXXXXXXXXREKEEESNRAPSPGGYTRFRTIFV 290
BLAST of mRNA_Ecto-sp6_S_contig101.777.1 vs. uniprot
Match: A0A448ZD07_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD07_9STRA) HSP 1 Score: 314 bits (804), Expect = 2.270e-84 Identity = 301/1079 (27.90%), Postives = 471/1079 (43.65%), Query Frame = 1 Query: 154 WEEQPDLYDWCDVLDRMDETLETNMLRHPSLLLIQPADHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLCCLNFLAVLMRSCVNKHVFSSAEHLRSLLAAGDDAVAESALRCLMLLTVPPLLHRHQQPELHSMCS-IHKDKAVSAELMT-LSGGWGGRGQGLGLLACVTG--RVEGEAKV---SGRYAPSQGTDEAAAAGAEDDADGADD-----------GSSXXXXXXXXXXXXXXXXXESNRAPSPGGYTRFRTIFVPARVGGPPAGEAGDADSTSEGMFRRLTKEHTA--VPKRRLFSLLARVRSAVAWRGGVEARRAAVRRRIMALTALVYCHPSQEALMAYMSIQPELIQELVDLVR-------VRTDQAAQMT-------------------VPLDISVLAVHCLAALVHTRSGAS-SLGLVARHTHVFQELGITRGQYTGLLPLLVRHGVASLFIMPEQDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAALSLGIAFVEAXXXXXXXXXXXXXXXXGGAPNADGGGVKEEKGTAGASSPVLSEMDQLR----WVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLN-----MDGQQGFGGMGKPFQ----RRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKEEGKXXXXXXXXXXXXXKGXXXXXXXXGKAKGTTXXXXXVVATGGGPDRVGEGGAGDDASAAAGGPLADPSPSQKALLFSLLNALSITFQNQTQTHQQV---GSDPLLEAFLTAAVMDVFRNSDMFGGVLVALTATLISDVANQDPSTTVAYLLRSGIVDEYLKVL----TATPAPPPSSDLLVTVPNVLHALCLTHDGASRVQEANVFPAFFRMLHTPESMHPQSRYPEGNMTSVVGAGLDELMRHVPALRPQCIKALVSSLKELVGKGDELLKRE---LAGDSSA----EVLNERTLMQQYAANFGQLLESALGRPENAKPFADAGGDEVLLSLFSLAVPGPRALLARASC 3168
+EEQ DL +W + L+R+D +L + ++P LLLI P + +++ L FL+ L+ + NK VF+S E L LLAA DD +A ++L L L +PP LH+ Q PE+ S +H K S + +T L+ GWG RG GLGL AC V G+ + +G S D+A E++ G ++ +S ES+ S G + R + +P +V ST++ F+ L + +P RLF LLA +R ++ R AA+ RR+ AL +++ +PSQE + Y QPEL ELVDL+R V AA + VP I LA+ L AL R G + SL ARH+++ ELG+ +GQY GLLP L+R+ +ASL + + A+ +G+AF+EA S+P + +QL ++++V +L A+VS G +++TECGL+PALLN V ++ M + F+ R++ +QAVQI+E A+V ++ ALSAF +L EVL + S EV R+ K + + D A +A+ G + + SQ+ +LF ++ L++ F ++ + G+ + + LT A++++ N D++GG L +L +TL+SDV N DP V Y+ +G+ +LK+L + P PPP +L++++P VL AL LT GA +++E N FP R+ H P+ P+SR MTS+VG GLDE+MRHVP+L KA+ +++ ++V GD++ +E A D+ +V +ERT + QY NFGQ+LE L E+ PF ++GG + +L ++ +P LA SC
Sbjct: 67 FEEQVDLQEWVEPLNRIDASLSFYIQKYPFLLLISPVERTTSKGASKLAKCIVSKPARSIEEVNGVTDSVRNNILVI-LKFLSGLLTNSSNKSVFNSVEELVDLLAAADDNIASASLETLCALAMPPSLHKQQVPEIQQHSSALHISKTTSHKRLTALARGWGTRGSGLGLYACAVSDDSVFGQGSLPQQAGELNFSFFRDKAY----EENRKGENEEESSLVHVNLPANSFTEDSEMMFEATLKNSDESDD--STGSKQKRRRVALPMKVD-------RTIRSTADLFFQCLRQAGGVERIPADRLFPLLADIRLTRSFHCQAS-RVAAIERRLRALITILHANPSQEVMSGYFQAQPELCVELVDLLRPTVSSGAVSASSAAPKSSKIPRQNRDHIVTLSNSPIVPYQIRELALQSLTALAARREGGNGSLTGFARHSNILTELGVGKGQYLGLLPTLIRYSLASLGSLVSTPSCRDIESNETMASSIEKSKVDA--------------------TAMDIGLAFIEA-----------------------------------TSTPTVPRFEQLEKALLFMDSVLTLTSAIVSTPSGTSSLTECGLVPALLNTVSIDAEVASMKIMPDSSSESEIFRIQSLLRFITAQAVQILEGAIVTHSNALSAFHNLKGVEVLTARLSKEVLGAREK--------------------------------------------------------------STKNGSDNDCTTMEI-------------DKADSASIGGV-ELRASQRVVLFGVVTCLTVVFHQESTSSSVATPSGTAEIQKPELTKALIEILDNVDLYGGHLASLISTLLSDVMNSDPHV-VKYVHENGLARSFLKMLDVGPSGVPIPPPVPELIMSIPTVLAALALTEAGAKKLEENNPFPGLLRLFHHPKYAMPRSRCLLNEMTSIVGTGLDEIMRHVPSLSKSICKAIANAMMDVVAFGDQVALKEHNETAADTQCPQALDVDHERTCLVQYGLNFGQILEQILHNEEHCGPFLESGGLDAILKMYPYLMPTSDRFLAHISC 998
BLAST of mRNA_Ecto-sp6_S_contig101.777.1 vs. uniprot
Match: B7G082_PHATC (HECT-type E3 ubiquitin transferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G082_PHATC) HSP 1 Score: 269 bits (688), Expect = 6.520e-70 Identity = 299/1093 (27.36%), Postives = 446/1093 (40.81%), Query Frame = 1 Query: 154 WEEQPDLYDWCDVLDRMDETLETNMLRHPSLLLIQPADHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLCCLNFLAVLMRSCVNKHVFSSAEHLRSLLAAGDDAVAESALRCLMLLTVPPLLHRHQQPELHS-MCSIHKDKAVS-AELMTLSGGWGGRGQGLGLLACVT--------GRVEGEA-KVSGRYAPSQGTDEAAAAGAEDDADGADDGSSXXXXXXXXXXXXXXXXXESNRAPSPGGYT-RFRTIFVPARVGGPPAGEAGDADSTSEGMFRRLTKEH--TAVPKRRLFSLLARVRSAVAWRGGVEARRAAVRRRIMALTALVYCHPSQEALMAYMSIQPELIQELVDLVRVRTDQA-------------------------AQMTVPLDISVLAVHCLAALVHTRSGAS-SLGLVARHTHVFQELGITRGQYTGLLPLLVRHGVASL------FIMPEQDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAA-LSLGIAFVEAXXXXXXXXXXXXXXXXGGAPNADGGGVKEEKGTAGASSPVLSEMDQ-LRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQQGFGGMGKPFQR--------------------RYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKEEGKXXXXXXXXXXXXXKGXXXXXXXXGKAKGTTXXXXXVVATGGGPDRVGEGGAGDDASAAAGGPLADPSPSQKALLFSLLNALSITFQNQTQTHQQVGSDPLLEAFLTAAVMDVFRNSDMFGGVLVALTATLISDVANQDPSTTVAYLLRSGIVDEYLKVL------------TATPAPPPSSDLLVTVPNVLHALCLTHDGASRVQEANVFPAFFRMLHTPESMHPQSRYPEGNMTSVVGAGLDELMRHVPALRPQCIKALVSSLKELVGKGDELLKRELA---------GDSSAEVLNERTLMQQYAANFGQLLESALGRPENAKPFADAGGDEVLLSLFSLAVPGPRALLARAS 3165
+EEQ DL+DW L+ +D L M +PS+LL+ P + + L FL L+R+ +K +F+SAE L LLAA DD ++ AL L+ L++PP LH+ Q PE+ ++H K S + L ++ GWG R GLGL + + G + GEA ++S Y + +E ++ S E + + T + R+G P E ST+E + L + +P RLF LLA +R A ++ AR AV RR+ ALT +++ HPSQE + Y QPEL E+VDL+R A + VP I +LAV LAALV R G++ +L AR + V ELGI +G Y GLLP L+R+ +ASL I+PE + DA L +G+AFVEA T P + ++++ L +V+ + +L +VS G AA+T+CGLIPALL V ++D + QR R+V++QAVQI+E A+V + AL+AF DL EVL+ S E+ + K E + K + + + T ++F + S + N + G + + LT A++ V + +GG + +LTATL+SDV N DP V+Y+ SGI +L ++ T P PP +L++ VPNVL AL LT DGA + E N FP+ R+ + P P+SR +T ++G GLDELMRHV L+P ++A+ +++K++V ++L KRE D E +ER+ + QY NFGQLLE L + +PF ++GG L+ LF ++PG L AS
Sbjct: 55 FEEQVDLHDWIYPLNVIDAALCHYMKTYPSMLLVNPVERRRGQPKALSSSARSLTDVDSVPASCYPHLYIL-------LRFLEGLLRNSTSKSIFNSAEELVDLLAAADDETSDLALTALLALSLPPALHKQQAPEVQQHTTTLHNAKMPSHSRLTAIARGWGTRAMGLGLWSVIKADDSVHGQGSLPGEAGRLSVCYYSRESQNEV------------NEESQMVRIYLNESDIMVGGSAEISMDSTSDALTAESDQVSKKRRIGKIPRKET---KSTAELYYLVLERAGGMDKIPSDRLFPLLADIRLARSFHSQA-ARIGAVERRLRALTTILHAHPSQEVMNGYFQAQPELCVEIVDLLRPTVSSANIAAASGRATETNSPLQRDAITCLSSCQPVPYTIRMLAVESLAALVARRDGSTGALSGSARLSTVLAELGIGKGYYLGLLPTLLRYSLASLDSPGHESILPEIEPEDLD------------------------------------DATMLDVGMAFVEA--------------------------------TMEPLPPRIVQVERTLEFVDNLLTLTSTIVSTPTGTAALTDCGLIPALLATVAHDLD---------RTIQRLLPDSSNCSTQEILRVYSLLRFVLAQAVQILEGAIVTHGNALTAFHDLRGVEVLSGRLSGEI--------------------------VTTGPDMLSRGQQKSEREELEHTQTFVSEFDT----------KIRSSQRGLLFSIIT------------------------------YLTVVFHQESTASTSATNPS------GGAQIRQEGLTRALIHVMEHVSSYGGHVASLTATLLSDVMNSDPHV-VSYIHESGIAKSFLSMVVGRRVKAGDSTDTYEPVLPPVPELVMAVPNVLSALSLTEDGAKVIYEINPFPSLMRIFYHPNYAMPKSRCLLNEITGIIGTGLDELMRHVERLKPLVMEAVANAMKDVVMYAEDLKKRENQFFFLSTSPLPDRGLE--DERSCLMQYVLNFGQLLEQLLHNDGHCEPFVNSGGLVALMQLFPASLPGGFQFLTHAS 972
BLAST of mRNA_Ecto-sp6_S_contig101.777.1 vs. uniprot
Match: A0A7S4IYT2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IYT2_9STRA) HSP 1 Score: 260 bits (665), Expect = 2.290e-67 Identity = 288/925 (31.14%), Postives = 401/925 (43.35%), Query Frame = 1 Query: 949 STSEGMFRRLTKE--HTAVPKRRLFSLLARVRSAVAWRGGVEARRAAVRRRIMALTALVYCHPSQEALMAYMSIQPELIQELVDLVRVRTDQAAQMT--------------------------------------------VPLDISVLAVHCLAALVHTRSGA---SSLGLVARHTHVFQELGITRGQYTGLLPLLVRHGVASL--FIMPEQDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAALSLGIAFVEAXXXXXXXXXXXXXXXXGGAPNADGGGVKEEKGTAGASSPVLSEMDQLRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQ-------QGFGGMGKPFQ----------RRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKEEGKXXXXXXXXXXXXXKGXXXXXXXXGKAKGTTXXXXXVVATGGGPDRVGEGGAGDDASAAAGGPLADPSP---SQKALLFSLLNALSITFQNQ------------TQTHQQVGSDPLLEAFLTAAVMDVFRNSDMFGGVLVALTATLISDVANQDPSTTVAYLLRSGIVDEYLKVLTA---------TPAPPPSSDLLVTVPNVLHALCLTHDGASRVQEANVFPAFFRMLHTPESMHPQSRYPEGNMTSVVGAGLDELMRHVPALRPQCIKALVSSLKELVGKGDEL-----LKRELAGDSSA--EVLNERTL----MQQYAANFGQLLESALGRPENAKPFADAGGDEVLLSLFSLAVPGPRALLARASCAGXXXXXXXXXXXXXXXXXXXQHSLANHAASQALTSAMKALGTHDTARLLKRVLVALDRELDRLDAARKAVVEAGGMSATVA 3414
STS+ F L + ++VP+ RLF LLA VR A ++ + R A+ R+ AL A++ HP+Q+ + Y + QPEL EL DL+R AA + VP + LAV L ALV R A SS+ + + ELG+ +GQ+ GLLP LVR+ +ASL F++ XXXXXXX XXXXXXXXXXXXX +SLG+AFV+A P A + E L +V+ V +L AVVSV G +A+TECGLIPAL+ V L+ + + + F G G Q +V +QAVQI+E A+V + ALSAFRDLG ++L +E+ +R G K++G XXX + VVA P GE P P S++ LLFS++N L++ F Q T Q G+ L A+ D+ N +GGVL AL+ATL+SDV N DP V Y+ SG+ +L + P+ PPSSDL++ +PNVL AL LT DGA+ V+E++ FP+ + PE P+SR M S+VG GLDE+MRHVP+LRP I A+V +K +V G EL G+SS+ + ER L + QYA+N GQLLE L E+ PF +AGG E L L+ L VP R LLA+ S ++A+ A+ + ++ RL+ +L L++ LD + + + GG +A
Sbjct: 42 STSDLFFLALERAGGRSSVPRSRLFPLLAEVRLARSFHRRTD-RIVAIENRLRALVAVLQSHPNQDVVGGYFAAQPELCSELCDLLRPTVSSAAVSSGTGIGGGAAAHPDGLELRGLSGRLDSSRSAGRDGISAVSDPPPPVPYSVRTLAVEALTALVARRDPAGTGSSMYPALKQSATLAELGVGKGQFLGLLPALVRYSLASLNAFLLGRGSGEQGSSXXXXXXXTDAPMEEADGXXXXXXXXXXXXXAL-----GMSLGLAFVDAALRP---------------PXXXXXXXXXXXXXXXARTRAEEEERALEFVDVVLTLTSAVVSVPSGTSALTECGLIPALVGTVALDSNRRARLREESRSFTGEGGEAQWGRESYADVLLNFVTAQAVQILEGAIVTHGNALSAFRDLGGVDLLVRRLVSEIEDVRREGG-------------DEAPLGGSQAAEMKDERDKKDGDGXXXVAMEDADEKE---------------EKNPAAVVAVSSAPGASGE--------------KKHPRPMRASRRVLLFSMVNCLTVVFHQQETAANSGSNASLTAASQSSGTAQLHRPEFADALRDIMENVGSYGGVLAALSATLLSDVMNADPQV-VRYVHSSGLAKSFLNMFLTGGGEEDSPTAPSVPPSSDLIMAIPNVLSALSLTEDGAAAVKESDPFPSLLAVFVRPEYAMPESRCLLNEMASIVGTGLDEIMRHVPSLRPLVIDAIVGVVKRVVKLGKELDEXXXXXXXXGGESSSVSKPEEERELAMNHLAQYASNVGQLLEQLLHTEEHVGPFLEAGGLESALDLYPLLVPSGRRLLAQVSALSCPSVSSAAHTNMSGTLNLAIKNVASGGYGHAVAGS----SAGESHRLMGNILGRLEKGLDEVAGVMRELRSCGGDLPAIA 898
BLAST of mRNA_Ecto-sp6_S_contig101.777.1 vs. uniprot
Match: A0A7S2L793_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L793_9STRA) HSP 1 Score: 238 bits (606), Expect = 4.230e-60 Identity = 229/868 (26.38%), Postives = 358/868 (41.24%), Query Frame = 1 Query: 1015 FSLLARVRSAVAWRGGVEARRAAVRRRIMALTALVYCHPSQEALMAYMSIQPELIQELVDLVRVRTDQAAQMT----------------------------VPLDISVLAVHCLAALVHTR-SGASSLGLVARHTHVFQELGITRGQYTGLLPLLVRHGVASL--FIMPEQDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAALSLGIAFVEAXXXXXXXXXXXXXXXXGGAPNADGGGVKEEKGTAGASSPVLSEMDQLRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQL------NMDGQQGFGGMGKPFQR---RYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKEEGKXXXXXXXXXXXXXKGXXXXXXXXGKAKGTTXXXXXVVATGGGPDRVGEGGAGDDASAAAGGPLADPSP----SQKALLFSLLNALSITFQNQTQTHQQVGSDP-----LLEAFLTAAVMDVFRNSDMFGGVLVALTATLISDVANQDPSTTVAYLLRSGIVDEYLKVLTAT-----------------PAPPPSSDLLVTVPNVLHALCLTHDGASRVQEANVFPAFFRMLHTPESMHPQSRYPEGNMTSVVGAGLDELMRHVPALRPQCIKALVSSLKELVGKGDELLKRELAGDSSAEVLNE----RTLMQQYAANFGQLLESALGRPENAKPFADAGGDEVLLSLFSLAV-PGPRALLARASCAGXXXXXXXXXXXXXXXXXXXQHSLANHAASQALTSAMKALGT-HDTARLLKRVLVALDRELDRLDAARKAVVEAGGMS 3402
F+LL+ +R + A+ R +A++ R+ AL ++Y S E++ AY QPEL ELVDLVR + T VP D+ LA+ L ALV R S A S + AR +V ELG+ +GQY GLLP L+R +A+L F++ E D L LG+AF+ A +++E+ L +++ V +L V+SV G +A+T+CG+IPAL++ + L N + + + +++ +QA+QI+E A+V + ALSAF +L +VL S+EV +R K ++ VV +D + D P +Q+ LLFS +N L++ F +Q + P L + L + ++D+ N + +GGV+ AL ATL+SDV N DP + V Y+ SG+ +L ++ P PS +L++ VPNV+ ALCLT GA V EAN FP +L +P+ P SR M +++G+GLDE+MRH P LRP+ +KA+V +K +V G +E + +A V ++ RT + QY N QLLE + PF AGG +VLL L ++ P R L+A ASC L + ++ +L+ +K + + +D +LL+++ AL +L LD + ++ A G S
Sbjct: 135 FTLLSTIRLSKAFYQNSNTRVSAIKLRLRALVTILYTLSSVESITAYFMAQPELCGELVDLVRPTVSSSGAATSSDGGVSXXXXXESESSNPILALADSPQVPYDVRALAIEALTALVARRDSPAGSFNIAARQANVLSELGVGKGQYLGLLPTLIRFSLAALNSFLLQED----------------------VNRGTEGQDDTNVDNNGDGDDTGLELGLAFIRATKPPPLPRK-----------------IRQERA--------------LEFIDAVLTLTSTVISVPSGTSALTDCGIIPALVSTIALDSQMTKNSNNSSSMEANEESYSNSLLKFITAQAIQILEGAIVTHTNALSAFHELKGVDVLVQRLSSEVENIR------------------------------------------------------------------KNSSAGDSDVVM--------------EDVQG-----MKDEKPRLQGAQRVLLFSAVNCLTVVFHSQDARAGANAAAPPGGALLRKPELMSVILDIMNNVESYGGVMAALVATLLSDVMNSDPQS-VHYVHSSGLAKSFLSLILGKENELKSVLGEDVEKWGEPIMEPSGELIMAVPNVVSALCLTEAGARVVAEANPFPTMLSVLCSPKYAMPNSRCLLSEMAAIIGSGLDEIMRHNPLLRPKIVKAVVQVMKRVVCIGKNRTLQEEGKNDTAIVADDLETARTQLMQYGNNITQLLEQLFHNEDYVSPFLSAGGFDVLLELARWSIIPTGRQLVAHASCLSNPSIAC----------------LTHSRSANSLSLVVKTIASSNDPQKLLQKISSALSTQLTYLDESMTSLRVATGDS 847
BLAST of mRNA_Ecto-sp6_S_contig101.777.1 vs. uniprot
Match: A0A7S2K3K2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K3K2_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.230e-36 Identity = 116/397 (29.22%), Postives = 175/397 (44.08%), Query Frame = 1 Query: 1726 EMDQLRWVETVFSLVWAVVSVQHGAAAMTECGLIPALLNVVQLNMDGQQGFGGMGK-PFQRRYVVSQAVQIMETAVVNNAAALSAFRDLGAAEVLASAFSTEVGRLRDAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKEEGKXXXXXXXXXXXXXKGXXXXXXXXGKAKGTTXXXXXVVATGGGPDRVGEGGAGDDASAAAGGPLADPSPSQKALLFSLLNALSITFQNQTQTHQQVGSDPLLEAFLTAAVMDVFRNSDMFGGVLVALTATLISDVANQDPSTTVAYLLRSGIVDEYLKVLTATPAP-PPSSDLLVTVPNVLHALCLTHDGASRVQEANVFPAFFRMLHTPESMHPQSRYPEGNMTSVVGAGLDELMRHVPALRPQCIKALV 2910
E L ++ET+ SL AVV+V G AAMT+CGLIPAL++V Q F G QR+Y+ SQAVQI++ A+V + +A ++F +L + L E+ ++ A + S + +L++++N L++ F Q + G + L LTAA+ ++ N D +GG+L+AL +TL+SD+ N DP V ++ SGI +L +L A PPS++L + +PNVL AL LT +GA V E N FP + H E P+S+ +MT++VG+G+DELMRHVP R +ALV
Sbjct: 41 EEQALDFIETMLSLTLAVVNVPSGTAAMTDCGLIPALVSV----FSASQPFYKNGHLDCQRKYIASQAVQILDAAIVAHTSAFTSFHELNGVDSLVKCLQDELEEIKQASGVGENAMEVEYQAQTRKL-------------------------------------------------------------------------------------TASNRVILYNIVNCLTVVFHQQEASSHPSGGNHLRTPALTAAMKELLNNIDSYGGLLIALVSTLLSDIMNADPQV-VHHVHDSGIAASFLAMLKGEKANVPPSAELFMAIPNVLAALSLTENGARIVCEHNPFPTLLTIFHDKEYAMPKSKCLLNDMTAIVGSGIDELMRHVPNSRLLATRALV 347
BLAST of mRNA_Ecto-sp6_S_contig101.777.1 vs. uniprot
Match: A0A1V9ZKE2_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKE2_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.540e-30 Identity = 113/355 (31.83%), Postives = 180/355 (50.70%), Query Frame = 1 Query: 2371 QKALLFSLLNALSITFQNQTQTHQQVGSDPLLE-AFLTAAVMDVFRNSDMFGGVLVALTATLISDVANQDPSTTVAYLLRSGIVDEYLKVL------TATPAPPPSSDLLVTVPNVLHALCLTHDGASRVQ---------EANVFPAFFRMLHTPESMHPQSRYPEGNMTSVVGAGLDELMRHVPALRPQCIKALVSSLKELVGKGDELLKRELAGDSSAEVLNERTLMQQYAANFGQLLESALGRPENAKPFADAGGDEVLLSLFSLAVPGPRALLARASCAGXXXXXXXXXXXXXXXXXXXQHSLANHAASQALTSAMKALGTHDTARLLKRVLVALDRELDRLDAARKAVVE 3387
++ L +LLN LS++F +Q S + + A L+ + + N D++G +L A ATL+SD+ N DP T+V ++ SG+ D +LK L T+ A PPS +L++ VP+VL ALCLT +V + V PA+ + H +S+ +G++ S+VG GLDELMRHVPA + I A V +L ++ DE +LA D + + T+ + +LE+ + + E+A FA+ GG + LL+L+S +P A LA + + Q SLA++ A+Q LT A +A +L ++L +D L+RL A A V+
Sbjct: 551 KQILAITLLNMLSVSFHSQGVMSAGATSRAIRDGAPLSKVLHAILTNIDVYGPMLFAQAATLVSDIINNDP-TSVNHVHASGLADAFLKTLCRWDLITSANALPPSPELVIAVPSVLSALCLTSTHVEKVVGYEPLAYLLDMFVMPAYV-LYHGYDSL-------QGDVASIVGGGLDELMRHVPAFQKPAIDACVRALHKIQTYADE----QLATDETHSAVLRMTM------HVCDVLETIVAKAEHATRFAELGGVDTLLALYSRILPSTSAFLATVTQS-----------------HESQASLAHYPAAQGLTVAARAYAGQQPTTMLSKILKQMDAHLERLPTAGIAAVD 869
BLAST of mRNA_Ecto-sp6_S_contig101.777.1 vs. uniprot
Match: G5A9Y3_PHYSP (UBA domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A9Y3_PHYSP) HSP 1 Score: 138 bits (348), Expect = 3.580e-29 Identity = 106/352 (30.11%), Postives = 178/352 (50.57%), Query Frame = 1 Query: 2362 SPSQKALLFSLLNALSITFQNQTQTHQQVGSDPLLE-AFLTAAVMDVFRNSDMFGGVLVALTATLISDVANQDPSTTVAYLLRSGIVDEYLKVLT----ATPAP-----PPSSDLLVTVPNVLHALCLTHDGASRVQEANVFPAFFRMLHTPESMHPQSRYP--EGNMTSVVGAGLDELMRHVPALRPQCIKALVSSLKELVGKGDELLKRELAGDSSAEVLNERTLMQQYAANFGQLLESALGRPENAKPFADAGGDEVLLSLFSLAVPGPRALLARASCAGXXXXXXXXXXXXXXXXXXXQHSLANHAASQALTSAMKALGTHDTARLLKRVLVALDRELDRLDAARKAV 3381
S ++ LL ++L +LS++F +Q S + E + L ++ + N D+FG V+ A TA ++SDV N DPS+ V ++ +G+ D +LK LT A P PPSS+LL VP VL+ALCLT A +V + + P+ +++ +G+ + VGAG+ ELMRHVP+ + I+A V +LK+++ G+E + + + +R ++ + + LLE L + E+A FAD GG +LL+L+ L +P + L A + Q S A++ A Q++T A+++ + LL ++ L ++D L AR V
Sbjct: 555 SETKTVLLLAILASLSMSFHSQGVMSAGATSRAIREGSALNKVLLQLLSNVDVFGPVVFAQTAVVVSDVINNDPSS-VNHVHAAGLADAFLKTLTRWDIAELYPSRILLPPSSELLTAVPTVLNALCLTTTHAEKVAKYEPLMHLLDVFALPQYTEDEAKDYCFQGDTAAAVGAGIFELMRHVPSFQNAAIQAAVHALKKVIRFGEESKQTTTSSAENIAGDKDRGILIRMTTHVADLLEPLLSKSEHAAYFADLGGIRLLLTLYQLILPSTSSFLDGALPSNKATKTGSP-----------QSSFAHNPAVQSITLALRSYASQQPTNLLAAIVKELSLQMDSLQRARAKV 894 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig101.777.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig101.777.1 >prot_Ecto-sp6_S_contig101.777.1 ID=prot_Ecto-sp6_S_contig101.777.1|Name=mRNA_Ecto-sp6_S_contig101.777.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1166bp MRIRASSGAGGVGQPEPRLSRELEPLKRAILEAKTDAELIAALKLVKGEDback to top mRNA from alignment at Ecto-sp6_S_contig101:43651..58120- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig101.777.1 ID=mRNA_Ecto-sp6_S_contig101.777.1|Name=mRNA_Ecto-sp6_S_contig101.777.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=14470bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:43651..58120- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig101:43651..58120- >mRNA_Ecto-sp6_S_contig101.777.1 ID=mRNA_Ecto-sp6_S_contig101.777.1|Name=mRNA_Ecto-sp6_S_contig101.777.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=3498bp|location=Sequence derived from alignment at Ecto-sp6_S_contig101:43651..58120- (Ectocarpus species6 EcLAC_371)back to top |