mRNA_Ecto-sp6_S_contig100.761.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig100.761.1
Unique NamemRNA_Ecto-sp6_S_contig100.761.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A6H5LDQ8_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDQ8_9PHAE)

HSP 1 Score: 412 bits (1058), Expect = 3.600e-142
Identity = 210/219 (95.89%), Postives = 212/219 (96.80%), Query Frame = 1 
Query:   16 GYEQRHPGDGTMEEPATDSQAQVSRGDRDPEKGPESADGNEQVDARQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            GYEQRHPGDGTMEEPATD QAQVSRGD D EKGPESAD N+QVD RQPLNYKPLSHRKLKDYNEGLAKRGVVYLSR+PPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKK GGNSGKRY EGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER
Sbjct:   35 GYEQRHPGDGTMEEPATDPQAQVSRGDLDSEKGPESADDNDQVDTRQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRVPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKGGGNSGKRYAEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 253
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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: D7FRL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL0_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 9.440e-80
Identity = 125/137 (91.24%), Postives = 128/137 (93.43%), Query Frame = 1 
Query:   49 MEEPATDSQAQVSRGDRDPEKGPESADGNEQVDARQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLI 459
            MEEPATD QAQVSRGDRDPEKGPESAD NEQVDARQPLNYKPLSHRKLKDYNEGLAKRGVVYLSR+PPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIAR  + S    L+
Sbjct:    1 MEEPATDPQAQVSRGDRDPEKGPESADDNEQVDARQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRVPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARGQSFSSAEKLL 137
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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A2D4BVT2_PYTIN (Pre-rRNA-processing protein ESF2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVT2_PYTIN)

HSP 1 Score: 224 bits (570), Expect = 1.030e-69
Identity = 107/166 (64.46%), Postives = 132/166 (79.52%), Query Frame = 1 
Query:  175 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            LS +KL++Y E  AKRGVVY+SR+PPFMKP K+KHL+ Q+G + RVYLV ED+A ++ R  AGGN   +YTEGW+EFEDKK+A++ A  LN   IGGRKR+YYHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  Y+E VE  + F KMEER
Sbjct:   30 LSTKKLEEYRERAAKRGVVYISRVPPFMKPEKLKHLLGQYGAINRVYLVPEDKAQQKRRVAAGGNRKTKYTEGWIEFEDKKVAKSVAAMLNTKQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIREQKLRMEIAQAKKENDAYLERVEQSKQFQKMEER 195
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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A5D6Y296_9STRA (RRM domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y296_9STRA)

HSP 1 Score: 214 bits (546), Expect = 3.300e-66
Identity = 105/166 (63.25%), Postives = 126/166 (75.90%), Query Frame = 1 
Query:  175 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            LS  KL+ + +   KRGVVYLSR+PPFMKP KVKHL+ Q G + R+YLV ED+ N + R  AGGN  + YTEGW+EFEDKK+AR  A  LN   IGGRKR+YYHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLRLE  QAK+EN  Y++ VE  + F KMEER
Sbjct:   22 LSREKLEAFKKRADKRGVVYLSRVPPFMKPEKVKHLLGQFGDINRIYLVPEDKTNHKKRVAAGGNRKQSYTEGWIEFEDKKVARQVAAVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRLEIAQAKKENEAYLDKVEQSKQFEKMEER 187
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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A8K1FEZ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEZ1_PYTOL)

HSP 1 Score: 213 bits (543), Expect = 1.210e-65
Identity = 101/166 (60.84%), Postives = 129/166 (77.71%), Query Frame = 1 
Query:  175 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            LS  KL +Y E +AKRGVVY+SR+PP+MKP K+KHL+ ++G + R+YLV ED+  ++ R  AGGN   +YTEGWVEFE+KK+A+  A  LN   IGGRKR+YYHDD+WNLKYL+ FKW+HLTEK+AYE R+R QKLR+E  QAK+EN  Y+E VE  + F KMEER
Sbjct:   30 LSKAKLDEYRERVAKRGVVYISRVPPYMKPEKLKHLLSKYGDINRIYLVPEDKVQQKKRVAAGGNRKTKYTEGWVEFENKKVAKTVATMLNTKQIGGRKRDYYHDDIWNLKYLKGFKWEHLTEKIAYENRIRDQKLRMEIAQAKKENDAYLERVEQSKQFTKMEER 195
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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: K3WDP5_GLOUD (RRM domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDP5_GLOUD)

HSP 1 Score: 213 bits (543), Expect = 1.810e-65
Identity = 104/178 (58.43%), Postives = 133/178 (74.72%), Query Frame = 1 
Query:  145 DARQPLNYKPL--SHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            DA++P     L  S  K++ + +   KRGVVY+SR+PPFMKP KVKHL+ Q+G + R+YLV ED+ + + R  AGGN  + YTEGW+EFEDKK+A+  A+ LN   IGGRKR+YYHDD+WNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  Y+E VE  + F KMEER
Sbjct:   24 DAKKPAKRSKLDLSREKMEQFKKKAEKRGVVYISRVPPFMKPEKVKHLLGQYGDINRIYLVPEDKTHHKKRVAAGGNRKQSYTEGWIEFEDKKVAKQVAKVLNTRQIGGRKRDYYHDDIWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLEKVEQSKKFEKMEER 201
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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A7S1TZ85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ85_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.520e-64
Identity = 99/168 (58.93%), Postives = 132/168 (78.57%), Query Frame = 1 
Query:  169 KPLSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            K L    L +YN  +A+RGV+YLSRIPPFMKP KV+HL+  HG VTRV+L  ED++NR+AR+++GG+  KRY EGWVEF +KK+A+  A SLNNT IGG +R+YYH+D+WN+KYL+ FKWDHLTEK+AYERRVR  ++R E +QA+RENA  ++L + G++   ME R
Sbjct:   35 KTLDAAALAEYNAKMARRGVLYLSRIPPFMKPQKVRHLLAVHGEVTRVFLAAEDRSNRKARRRSGGSKAKRYDEGWVEFAEKKVAKRVALSLNNTKIGGSRRSYYHEDIWNIKYLKGFKWDHLTEKLAYERRVREHRMRAEMLQARRENAMLLDLADQGKALRAMEGR 202
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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: H3HB09_PHYRM (RRM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HB09_PHYRM)

HSP 1 Score: 209 bits (533), Expect = 3.670e-64
Identity = 97/166 (58.43%), Postives = 130/166 (78.31%), Query Frame = 1 
Query:  175 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            LS  K++ + E   +RGVVY++R+PPFMKP K++HL+ ++G + R+YLV ED++  + R  AGGN  ++YTEGW+EFEDKK+A+  A+ LN TLIGGRKR+YYHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  Y+E V+  + F KM+ R
Sbjct:   21 LSREKMEQFKEMAERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKSLHKKRVSAGGNRRQKYTEGWLEFEDKKVAKRVAKMLNTTLIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVDQSKQFEKMDAR 186
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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: A0A3R7J166_9STRA (RRM domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J166_9STRA)

HSP 1 Score: 209 bits (531), Expect = 4.450e-64
Identity = 100/183 (54.64%), Postives = 133/183 (72.68%), Query Frame = 1 
Query:  133 NEQVDARQPLNYKPL---SHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            N +  + +P  +KPL   S  K++ + +   KRGVVY++R+PPFMKP K++HL+ ++G + R+YLV ED+   + R  AGGN    YTEGW+EFEDKKIA+  A+ LN T IGGRKR+YYHDDMWN KYL+ FKWDHLTEK+AYE R+R QKLR+E  Q+K+EN  Y+E V+  + F KME R
Sbjct:    3 NMEASSSKPATHKPLEGLSREKMEQFKQKAEKRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKVLHKKRVSAGGNRRTNYTEGWIEFEDKKIAKRVAKMLNTTQIGGRKRDYYHDDMWNFKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQSKKENEAYLERVDQSKQFEKMEAR 185
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BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Match: D0MVG4_PHYIT (Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVG4_PHYIT)

HSP 1 Score: 209 bits (531), Expect = 6.910e-64
Identity = 97/166 (58.43%), Postives = 129/166 (77.71%), Query Frame = 1 
Query:  175 LSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGVVTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNNTLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQAKRENARYVELVESGRSFAKMEER 672
            LS  K++ + E   +RGVVY++R+PPFMKP K++HL+ ++G + R+YLV ED+A  + R  +GGN  ++YTEGW+EFE+KK+A+  A+ LN T IGGRKR+YYHDDMWNLKYL+ FKWDHLTEK+AYE R+R QKLR+E  QAK+EN  Y+E VE  + F KME R
Sbjct:   21 LSREKMEQFKEKAERRGVVYIARVPPFMKPEKLRHLLGKYGELNRIYLVPEDKALHKKRVSSGGNRRQKYTEGWIEFENKKVAKRVAKMLNTTQIGGRKRDYYHDDMWNLKYLKGFKWDHLTEKIAYENRIRDQKLRMEIAQAKKENEAYLERVEQSKQFEKMEAR 186
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.761.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LDQ8_9PHAE3.600e-14295.89RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FRL0_ECTSI9.440e-8091.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2D4BVT2_PYTIN1.030e-6964.46Pre-rRNA-processing protein ESF2 n=1 Tax=Pythium i... [more]
A0A5D6Y296_9STRA3.300e-6663.25RRM domain-containing protein n=1 Tax=Pythium bras... [more]
A0A8K1FEZ1_PYTOL1.210e-6560.84Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WDP5_GLOUD1.810e-6558.43RRM domain-containing protein n=1 Tax=Globisporang... [more]
A0A7S1TZ85_9STRA2.520e-6458.93Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
H3HB09_PHYRM3.670e-6458.43RRM domain-containing protein n=1 Tax=Phytophthora... [more]
A0A3R7J166_9STRA4.450e-6454.64RRM domain-containing protein n=2 Tax=Phytophthora... [more]
D0MVG4_PHYIT6.910e-6458.43Pre-rRNA-processing protein ESF2 n=2 Tax=Phytophth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:579672..587036 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score248.1
Seed ortholog evalue4.7e-63
Seed eggNOG ortholog2880.D7FRL0
Preferred nameABT1
Model size787
KEGG koko:K14785
Hectar predicted targeting categoryother localisation
GOsGO:0000028,GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0001671,GO:0003674,GO:0003676,GO:0003712,GO:0003713,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005667,GO:0005730,GO:0005737,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006364,GO:0006366,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006996,GO:0007275,GO:0007399,GO:0007417,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009605,GO:0009607,GO:0009617,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0016043,GO:0016070,GO:0016072,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0021510,GO:0021515,GO:0021517,GO:0021522,GO:0021953,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030182,GO:0030234,GO:0030490,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032781,GO:0032991,GO:0034462,GO:0034470,GO:0034471,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0042742,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043462,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045935,GO:0046483,GO:0048513,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051336,GO:0051345,GO:0051704,GO:0051707,GO:0060255,GO:0060589,GO:0060590,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0097659,GO:0098542,GO:0098772,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Exons4
EggNOG free text desc.small-subunit processome assembly
EggNOG OGsKOG3152@1,KOG3152@2759
Ec32 ortholog descriptionNucleotide-binding alpha-beta plait domain
Ec32 orthologEc-12_002630.1
Cds size783
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348727.399905-CDS-Ecto-sp6_S_contig100:579671..5799801682348727.399905-CDS-Ecto-sp6_S_contig100:579671..579980Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 579672..579980 +
1682348727.4096744-CDS-Ecto-sp6_S_contig100:580512..5806301682348727.4096744-CDS-Ecto-sp6_S_contig100:580512..580630Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 580513..580630 +
1682348727.4171534-CDS-Ecto-sp6_S_contig100:586333..5865141682348727.4171534-CDS-Ecto-sp6_S_contig100:586333..586514Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 586334..586514 +
1682348727.4252899-CDS-Ecto-sp6_S_contig100:586859..5870341682348727.4252899-CDS-Ecto-sp6_S_contig100:586859..587034Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 586860..587034 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.761.1prot_Ecto-sp6_S_contig100.761.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig100 579672..587034 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig100.761.1

>prot_Ecto-sp6_S_contig100.761.1 ID=prot_Ecto-sp6_S_contig100.761.1|Name=mRNA_Ecto-sp6_S_contig100.761.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=261bp
PRESGGYEQRHPGDGTMEEPATDSQAQVSRGDRDPEKGPESADGNEQVDA
RQPLNYKPLSHRKLKDYNEGLAKRGVVYLSRIPPFMKPAKVKHLMEQHGV
VTRVYLVEEDQANRRARKKAGGNSGKRYTEGWVEFEDKKIARATAESLNN
TLIGGRKRNYYHDDMWNLKYLRKFKWDHLTEKVAYERRVRSQKLRLETMQ
AKRENARYVELVESGRSFAKMEERKRKRRQDGGDDNNAASVAPTIGGGSP
AAAAAAAATKS
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mRNA from alignment at Ecto-sp6_S_contig100:579672..587036+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.761.1 ID=mRNA_Ecto-sp6_S_contig100.761.1|Name=mRNA_Ecto-sp6_S_contig100.761.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7365bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:579672..587036+ (Ectocarpus species6 EcLAC_371)
CCGAGAGAGAGCGGGGGGTACGAACAGAGACACCCAGGAGACGGCACGAT
GGAAGAACCAGCTACCGACTCTCAAGCCCAAGTCTCTAGAGGCGATCGTG
ATCCGGAGAAGGGGCCGGAGAGTGCCGATGGCAACGAACAGGTGGACGCT
CGGCAGCCTTTGAACTATAAACCGCTCAGCCACAGGAAGCTGAAAGACTA
CAACGAGGGCCTGGCCAAGCGGGGGGTGGTGTACCTGAGCCGCATTCCGC
CCTTCATGAAGCCCGCCAAGGTTAAGCATCTCATGGAGCAGCATGGCGTC
GTGACACGGGTGAGTCAACCAAGGTTAGGTTTTCATTGGGGCAATTTTGC
CCGTGTATCGTAGGTGACGTAGCATAACACACCCTCTGGTGAGACGTAGC
ATAGGTTTTCGGAAAGCTCTCCACAAGATGTTTCAACGCCGCAATTGTCG
GCACCGCCTCTCTCCTCTGCTGCGGAGTAATCGGGTGGTGAAAATCGGTC
CGGGGGTGTGATATCTCACGTCACCTAGGTAGTAGGCAAACAGTAGTACA
CCAACAATCGAGCAATCCAGCCACACACAAGAGGCTTCCTACTGCTGCTG
CTGTAACGGGTGCCGCAACCAAACAAACAGGACTTGCATGGCCACTGCAG
GCACAGGTCATGGACAAGTCCGGCATGGCGCACCCTGATTTGTGTGCATC
TCGCGAACAATTTGCTTGGCCTTGCTCGCCCACCCGGCTCTTGTTGTACT
CTTAGAACCACTACAAAAGTACGTATAATACATGAAGTGGTACTTGGCGC
GTCCACCACCTGATGCCCTTGTCCTGCCGGGAATGAATCAGGTATACCTT
GTGGAGGAGGATCAGGCCAATCGCCGCGCCAGAAAAAAGGCCGGCGGGAA
CTCTGGGAAGCGTTATACCGAAGGCTGGGTAGAGTTCGAGGACAAGAAAA
TTGCACGAGGTCAGTCTTTTTCCAGCGCTGAGAGATTGCTGTATACTGCA
TAAAGGGCCACAAGCCAGTGCCGGCCCGCTCGTAGGAGCCACCTACACAA
TATTGAGTAAGGCTCGAAGAAAGCCTTGCCAACTATCGAACACAAGCTTT
TGCTGAGCTTACAGAAAGGATTCAGCGTCCTGCCGGCGGCTGAGCCCAAT
CTCTTACGCCATTTTTCTTATTTCTCCGGAAACCCTGAGCCTCGAGTTCT
TGTGAATATGTCTCGTACCTCCTTCGTACGAGCGGACCAGCACTCGGGAC
TGTTGTGCGTGTACACTATTTCACTACTTACATGGTCTATTATAGTATAA
AGTCTACGACAGAACAGCGTACGTAGGTTGTGCTGCACAGCAGTAAGCAG
AGGCCAGCGCCTTTGTCTCCATTGACACGCGGGTGTTGGTTCGAGTCTAG
CTTCTTTTTTATTCGGAGACGCTGGAGACACTGCCGAGAGAGAGAGAGGT
GCAGCAAAAGAGAAACTGCTGTACTTGTGGACATGCAACAGCTATATCCA
CCTATAGATAATGAGGGCTGCCCGCGACAGGGTGGTGGCCACAGACAGGG
TCGTACAACGGTTGATGAGTAGTAGCTATGCGGCTGATAGGGCAGGTTAG
ACTCGTAGGCCTTGAAATGATCAGTCGTCGTGCTGCCGAAACTACTCTAT
TTTCAGTATGATAAAATGATCGATGTAAATGATCTATGAGGGCTTGTAGA
CCAACAAGCCGCTATTTGCACTTCCGGGTCACTAGAGGTCCTGTGTTATT
CCCACAAGCACACAAGCACAACAGCACACACCTACCTTCTCATGAACGGT
TCCCTAGGTTTGGGCGAGGATATGTATGTCTGGAGCTGTGCATACGTGTT
GCTGGCTGTTCCATTGCTCAGCTACATCCTCGCAGATGCTGCTGTTGGAA
TACAGCGAAGAGAGACATAGATCGCTAGCACCCCCGCGCGCGCACGAAGA
ACAAGTCCGTTCGAGCTAGCTCGTGGTATTTTCATCGTCTAGTGTGATCA
GTGAAGCAGCAGGCGGTAAAGCAAAGTTGGTGTGCAGCAGCAAGAAGACA
TGAAAAAAATGTAGAAAGGGCCAAAAGTCCGAAAAAAAAGGCTCGCGGCA
CACTATCGCTGTGTGTGCCGATCTCGCTTGCTTGACCTACGAGGCTAGAC
ATCCTACCACAGGATCAGGGACCACTAGATCCCGGCCTCCTTTGCAGGGG
TACGGTGGCGGCAAGCAATACCAAGCAGTGTCTCCTCTGTTTCCCGCAGC
AGCATTTGTGATGACAGACAACGTTTTCAGTCCGGATGTATCGGATTCTT
TTTAGACCACAGACGCACCGATCGCAGCAGCAGCAGCAGCAGCAGCAACA
ACACAAGTCTCAGCCTCCAAGGGCCAAGCAAACTGACTGCTTTGATGGCA
TACGCTTGTCACGTGTGTCTGTGGGATTCGTTCGCCACCGCTTGTTGCGT
GGTATCACTGAGGCATATAACAGTTCTATCAGTTGTGTTCGGCGTAACTT
TCGAGTATTTCGCATTTCCAGCGGGCCGCTCTCCGTTCAAAGATCGGTTT
TCTCGAGCCCTGACAGACCAGCATCATATTTCACTTGGATTTAGAGTaCT
GTCTTTCCGCTTTCCGGGGCATTCACACACCGGTCTCTTTTCCGATTTTC
ATGACAGACCAGATCACTTGGATTTAGAGTACTGTCTTTCCGCTTTGGGC
TGCCGGTCTGTCCGATTTTCGATCTGGGCCCGGTCTGTCTTGAGACTCAG
GAACTCCTTTGCGGCTCTTCCTATTACACGAGGCATATCGCTCTTCGTTT
CGCTCTCTGTCTGGATCTCTCGTACTCCTTTCTTTGCGATCACATCAGGT
CTATCTCTCGCTGTGTCTGGATCTCGCTCTCGGGATTTTTTCGGCTTTTT
TCCGTTTTCCCGCCGTTGGATTATCCGCCTGCTTTCTCCGATTCGCCGCT
TTCCCGACACCTGCAACTTGCGCAGCTCTCTCCCTCTCTCTCCCTCGCAC
ACGCGCTCCCCGCCTGCTCTCATTGCCCCCCTCCTCTCACTCCGCCCACA
GCGCCTTCCACTTACTACCACCAAGCGCCACATTTCGCGCCCCCTCCTCT
CACTCCCCCGAGAGCACCCTCCACTGCCTACCAGCACCCGTCTAAGTATA
TGTAGAACGCATACATTTTTTGTTTCGGCCACGAGCTCTCCATTCTTCAA
GCGTCACATTTCCAGCGGGCCGTTCTCCGGGCAGCATTCATTCCGGATTT
TCGGCCGCTGACAGACGACCTTTTTTTTCCGTTCCTGATTTCTATGTGAT
GATCACAATCTCTCAGCTGTATAGTATAACACGCTGTGCTTTCTAGAGCA
GTACACAGTAGTAGTAGTTCTCGCTTTGTCTCTCTCTGGGCTTGGTCTCT
CTTGCTCTACTTATTTTTTTCTCTCTCTGTCGATGGCTCTCTATTATCTC
TCCGATTCTTTCCGGGGAATCTTTGCGATTCGTTCCTGTTGCCACAGAAG
GCTTTCCGGTACTCCCCTCTCCTTTCGTGCCCCGCGCAGACAGCCGCCCG
ACGCTCACACGTAGCTTCTTCGTGTTCCGTTGGGGTGTGTACACGACGAC
ACGCTGTTCTTTCCAACAGAACAATACAAAGCAGCGTAGTGCTTTCTCAA
TACATGCGTGTTCCAATACATGCATGCGTGGCTGCCTGTTTTGTGTGCAT
TTTTTTTCAGTTTGGGTCCATCCAATATCTCCAAGCAGAGGTTCTTCCGA
ACAAACACAGGCAAGATGTTCCGATCTTTTGACTGGATGGCTCGGTCGTT
CCGGCTTTCCGATCACACGACGTCTGTCACTCTGTCCTCCCCTGCACACA
TTGCTTGCGGCTCTCTGTCTGTCTGGATCTACGGTGAGAGGGCTCCATTT
TGGGTCTTCTCGGGCTCTCACAGGGCTCCATGTTCTCATTTCCATCTGTT
CCAGATCTATCTTTAGAGCTCGCTCTGTTATTTTCCGCTCACCGTTTCTC
TCTCATGCCTTCTCATTTTGCGTCTGGCTCGTTCATCACATCCGGCTCGG
TCGCACGGAACCTTCGCCCTTTCACACACGTTACATTATTTCGTGCCAGT
CTCTCTCTCCCCTCTCATATACCAATCTAACGTCGGTTCTTACAACAACA
ACACCAACAACAGCAGCCTGTTTCTCCCTCTCACATGTCCCACGGCGGTA
GTATTGTTCATTCCCGTTTTCGTTTCCGCTTTGTTGACCATTCCCGTACG
GCCGTTCGTTTACTGCATGGTTTCTTCGTGCTTTTTGCATCATTTACGCT
CGCCGCCTGTGCGCTCGCCGCCTGTGCGCTCGCCGCCAGTGCGCGTGTTT
GGCGCGTGTCCAATTTATTTGCGGAATCGCGCGGGACGCATCCCTTCCCA
CCCCCTCGGTGTCGCACCAAATTACCGCGCACGTAATAACAATAAAGAAC
AGCATCGTGCTTTCTCAATAAATGCATGCGTGTTCCAATACATGCGTGGC
TGCCTGTAAACTCTGTTGTTATGTGGTTGTTTCTGTTCACTTTGGGTCCA
TCCAATATATCTCCATGCAGAGGTTCTTCCAAGCAAACGCACGCACGCAT
CGTGCTTTCTCAATAAATGCATGCGTGTTCCAATACGTGCGTGGCTGTGC
CTGTAAACTCTGTTGTCATCGTGCTTTCTCAATAAATGCATGCGTGTTCC
AATACGTGCGTGGCTGCCTGTAAACTCTCTTGTCATGCGGTTGTTGTGTG
CAACTCTTTTCACTTTGGGTCCACTCAATATCTCCAAGCAGAGGTTCTTC
CAAATAAACGCAGGCACGTTTTCACTATCTAGTCTATGCTTATATATGCC
GATCTCATTGAGATAGACTGGCTAGATGGCCCGGTCCTTCTGGGTTTCTG
ATCACACGACGTCTGTCGCTCTGTCCTCCGCTGCACACATTTATTTGCGG
CTCTCCTCTCACCCGAGGCACTAGGTCTGGCCCTCTGTCGCTTCCCTGTC
TGTCTGTCTGGATCTATCTACGCTGAGAGGGCTCCATTTCGGGTCTTCTC
GGTCTCTCTCACAGCGCTCTACTTATTTCCTCGTTTCCATCTGTTCCTCG
CTGTTGTTTTCTTGCGTTATATACACGCGTTCGTCTCTCTGGGATCTCGC
ATGTATGTACGCCCCGAACATGCGTGTCTACAAGAATTTCATCTCTCTCC
GGGATCTTTTCAGGGCTGGCTTCGTATATCTCCGTTTCTCACATGCATGC
AAACAACCCTGAGCATGTTCATGGGAACGTACTTCACGGGAATCTCACAG
CCACGGCATGCCACAAACGAAGCCCCATTCAACAAACGCCGACTAACATC
GTGCATCAAACACCAAGTAACATTCGTCTTGCGGTACGCTTCTCTCAGCG
TGGCGGCGTGAGCCGCCCAAAAGCCTTGTATATATATGTGTTGTGTGTGC
TTCTCTCTCTCGCTGACGTCCTTTTCGCGGTGCCCAAGGACCGGTTCTCG
AGATTTGGTTGGCTCGATCATCTTTCCATCTGGAAGATCCGGGACACATT
ATGAAAAAGAATCCTATATGTTTGTTGGGCCATTAGCACCCCTAACTGTG
GCATTCGCATTCAGTGCATTTTCCGAATTTTGGTACCGAGCCAGGAACCT
TAGTTTTCTCGCTGGCACTGACGCATTTTCATTGGTCACCGGTGAGCTCA
GTCGATGCTAATAGTAATGACACACCTATCTTTGCCAACACCTGGCGTGG
AAGGAGACAGGGCGGCAACTCCATGGCATGCCAACACACCAGCATATGCG
AATGATACGTCAATGATCTATCAGTAAGCCTGAAGACCCAAAAAGCTTAA
ACGTTTGTCTCTCTTGCCTCCTGTTTGCCGTGTCGGTATCACTCTGTCGC
CGAAAAGAAGTGAGGATGAAAATGTCAAGTGCCTCTGAAGTGGTTGGGAC
ATTTCCTGAGCCAGTCTTCATGTATTCCCAGCATTTTAGCGACCGTGTTG
ATTCCCATACAGTGTGGGACAAGACACTGACATCACCTCCCGCGGCTGGT
GAGGCTACCCTCGCCATACTTGCCTCAAGAAAACTCCTTCCAATCCTGAT
TTTGAGCTTTTTTCCTTTGTTCTTCCCTACCCTGGAAGTAAAGGTCATTA
CCGACTCACACCCTGACGGGTTTGCTGGGTACCTGTTGAGCCGGAAACGA
TATCAATGTCCACGTACTGCTGTCGAGTGTAAGTTTCAACCAGGTGTGGA
AACACGTTTCTTTCTCCAGCCTACCGTATGTCGTTCGCCGCTCACGTGCC
TGCTGCACACGTGCACGCGACTATCCAACAGTACTACAATGCGTTCCGCT
GCCCACCCGTTTCCTGTCCCTGTGCACGTTATTACGCGAATCTGGCTTCA
AACTCTCGGCACACGGTCGGTATGCCTACGTGCGTCTCCCCGGTTCAATT
CGAACGAAAGTACCATATCGACCAGGCAATGTGTTTTCGCGCCTTACACT
CTTGTGCTACATATATTGCACATGACGGGGCGGTGTACTTGCCCCACGCT
GTCCTCGAACCATCGCGGCCTGCTGCAACGGGAATACCAATCAATGCCGA
GTCCCAACCCCACGGAGGTGATTCGCCCGTTCCAATGCCGCCCCCCCCCC
CCCGCCTTCCAGCCACCGCGGAGAGCCTGAACAACACTCTCATCGGCGGG
AGGAAGAGGAATTACTACCACGACGACATGTGGAATCTCAAGTACCTGCG
CAAGTTCAAGTGGGACCACCTGACGGAGAAGGTGGCCTACGAGCGGAGAG
TGCGGTCGCAGAAGCTGCGCCTTGAAACGATGCAGGCGAAGAGGTGAGCT
GGAGCACGCGCGTGTGCGGGGTGCTATTTCTCTATTTTTTTCAGTTAAAA
CATCCAATTGACTCTTCGCCAACGGGCTAATCGGTTTAACAATAAATAAA
TGTGTCTAACGGCGTGCACCCGCGGCTCTCCGAGTATTGTAAGATGATGA
CTGTGTATTTCGAAGGCGCACTTGCCAACTCACGCTGGCTGCCTCGGAAA
TCCCCAACCGCGGGCAACCATGCCTTTTCGTGCCTTCCCCACCAATGCTC
CTGCTGCTGCTGCTGCTGCTGTTGCTACTCTGCTGGCAACACCTCCGGTC
GTAATGTTTATCTTTGTTTCCCCCCGCGAAAACAACAGAGAAAACGCGCG
GTACGTGGAGCTGGTGGAGAGCGGGCGATCCTTCGCCAAGATGGAAGAGC
GCAAGAGAAAACGCAGACAGGATGGGGGCGACGACAACAACGCAGCATCA
GTAGCCCCCACCATCGGGGGGGGATCGCCGGCGGCAGCGGCGGCGGCAGC
GGCAACCAAGTCGAC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:579672..587036+

>mRNA_Ecto-sp6_S_contig100.761.1 ID=mRNA_Ecto-sp6_S_contig100.761.1|Name=mRNA_Ecto-sp6_S_contig100.761.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=783bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:579672..587036+ (Ectocarpus species6 EcLAC_371)
CCGAGAGAGAGCGGGGGGTACGAACAGAGACACCCAGGAGACGGCACGAT
GGAAGAACCAGCTACCGACTCTCAAGCCCAAGTCTCTAGAGGCGATCGTG
ATCCGGAGAAGGGGCCGGAGAGTGCCGATGGCAACGAACAGGTGGACGCT
CGGCAGCCTTTGAACTATAAACCGCTCAGCCACAGGAAGCTGAAAGACTA
CAACGAGGGCCTGGCCAAGCGGGGGGTGGTGTACCTGAGCCGCATTCCGC
CCTTCATGAAGCCCGCCAAGGTTAAGCATCTCATGGAGCAGCATGGCGTC
GTGACACGGGTATACCTTGTGGAGGAGGATCAGGCCAATCGCCGCGCCAG
AAAAAAGGCCGGCGGGAACTCTGGGAAGCGTTATACCGAAGGCTGGGTAG
AGTTCGAGGACAAGAAAATTGCACGAGCCACCGCGGAGAGCCTGAACAAC
ACTCTCATCGGCGGGAGGAAGAGGAATTACTACCACGACGACATGTGGAA
TCTCAAGTACCTGCGCAAGTTCAAGTGGGACCACCTGACGGAGAAGGTGG
CCTACGAGCGGAGAGTGCGGTCGCAGAAGCTGCGCCTTGAAACGATGCAG
GCGAAGAGAGAAAACGCGCGGTACGTGGAGCTGGTGGAGAGCGGGCGATC
CTTCGCCAAGATGGAAGAGCGCAAGAGAAAACGCAGACAGGATGGGGGCG
ACGACAACAACGCAGCATCAGTAGCCCCCACCATCGGGGGGGGATCGCCG
GCGGCAGCGGCGGCGGCAGCGGCAACCAAGTCG
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