prot_Ecto-sp6_S_contig100.753.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig100.753.1
Unique Name	prot_Ecto-sp6_S_contig100.753.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	247

Homology

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BLAST of mRNA_Ecto-sp6_S_contig100.753.1 vs. uniprot
Match: D7FRL9_ECTSI (Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL9_ECTSI)

HSP 1 Score: 469 bits (1208), Expect = 1.270e-165
Identity = 237/246 (96.34%), Postives = 241/246 (97.97%), Query Frame = 0

Query:    1 MPPFAHRAAATAALLLCPLSSAFVPALPSPHERRPAAVGRGLVAATTPAVAQTTSRACSTRPRAKRGLHATELGAAADRGGGGEECGDEGKGGEEKPPRSVLERPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAAKVQNGSSSHFDNWADRIPEDGAPDGFVLTCSTHPTGPGVKLDLSANAEMWDAYCARLDDISTQDLLRQTSAEVMRKYRVEHPDYFREEVERQFK 246
            MPPFAHRAAATAALLLCPLSSAFVPALPSPHERRP+AVGRGLVA +TP VAQTTS ACSTRPRAKRGLHATELGAAADRGGGGEECGDEGKGGE KPPRSVLERPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAA+VQNGSSSHF+N ADRIPEDGAPDGFVLTCSTHPTGPGVKLDLSANAEMWDAYCARLDDISTQDLLRQTSAEVMRKYRVEHPDYFREEVERQFK
Sbjct:   88 MPPFAHRAAATAALLLCPLSSAFVPALPSPHERRPSAVGRGLVATSTPVVAQTTSPACSTRPRAKRGLHATELGAAADRGGGGEECGDEGKGGEGKPPRSVLERPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAARVQNGSSSHFENSADRIPEDGAPDGFVLTCSTHPTGPGVKLDLSANAEMWDAYCARLDDISTQDLLRQTSAEVMRKYRVEHPDYFREEVERQFK 333

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BLAST of mRNA_Ecto-sp6_S_contig100.753.1 vs. uniprot
Match: A0A836CQ20_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ20_9STRA)

HSP 1 Score: 108 bits (271), Expect = 6.060e-26
Identity = 57/157 (36.31%), Postives = 89/157 (56.69%), Query Frame = 0

Query:  103 ERPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAAKVQNGSSSHFDNW------------ADRIPEDGAPD-GFVLTCSTHPTGPGVKLDLSANAEMWDA-YCARLDDISTQDLLRQTSAEVMRKYRVEHPDYFREEVERQF 245
            E+ W+V  + HGE   + ++P D+IL+AAE++G+   Y+CRRGNC++CA + +  SS +                +D    D A D GF L+C ++P GPG++++L    E W   YC RL D +T+    +  A+V R Y   +PD F  ++ERQF
Sbjct:    8 EKTWEVTFELHGEETTVLMRPDDTILQAAELAGLRAPYDCRRGNCLTCAGRFKAASSYNLVTTLRQEAGGAVTLDSDTFLCDEAKDEGFFLSCCSYPVGPGLRVELGVQKEAWQIQYCDRLRDEATRAAALEAVAQVQRGYSERNPDKFVADLERQF 164

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BLAST of mRNA_Ecto-sp6_S_contig100.753.1 vs. uniprot
Match: A0A0G4EXA3_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EXA3_VITBC)

HSP 1 Score: 72.8 bits (177), Expect = 1.160e-12
Identity = 37/109 (33.94%), Postives = 60/109 (55.05%), Query Frame = 0

Query:  104 RPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAAKVQNGS--SSHFDNWADRIPEDGAPDGFVLTCSTHPTGPGVKLDLSANAEMWDAYCARLD 210
            R W +E+++ G+   + V  G S+LEAAE    +   +CR G C SCA ++  G    ++  N  D + E     G+VLTC T+  GPG+K++L+ N E++     R +
Sbjct:   18 RSWTIELNYDGDIETVEVPEGTSVLEAAETVWEDPPCDCRNGVCTSCAGRIVGGKLGEAYVIN-RDSLEEVTKDKGYVLTCQTYVCGPGLKVELNKNEEVYGMQYGRFE 125

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BLAST of mRNA_Ecto-sp6_S_contig100.753.1 vs. uniprot
Match: A0A7S4F9M2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F9M2_CHRCT)

HSP 1 Score: 73.6 bits (179), Expect = 1.280e-12
Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 0

Query:  100 SVLERPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAAKVQNGSSSHF---DNWADRIPEDGAPDGFVLTCSTHPTGPGVKLDLSANAEMWD 203
            +V++R W V V    +  V+ V  G  +L A E +G+    +CRRGNC+SCAA++ NG+       DN A  +  +    GFVL CS +  G G+++++    E+W+
Sbjct:   17 AVVKRAWPVTVHIGRQAHVLRVPEGQPVLLALEAAGLLPGSDCRRGNCLSCAARIINGAPFSLRVRDNTA--LCSEAHESGFVLLCSAYVCGKGLEIEVDMEGEVWE 121

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BLAST of mRNA_Ecto-sp6_S_contig100.753.1 vs. uniprot
Match: A0A0G4EFE2_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFE2_VITBC)

HSP 1 Score: 72.8 bits (177), Expect = 2.830e-12
Identity = 38/103 (36.89%), Postives = 55/103 (53.40%), Query Frame = 0

Query:  108 VEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAAKVQNGSSSH-FDNWADRIPEDGAPDGFVLTCSTHPTGPGVKLDLSANAEMWDAYCARL 209
            V+V  +G+   +TV PGDSILEAAE +G+ L ++CR G C+ C AKV +GS  H      D + E G    + L C   P    V +++    E+ D   A +
Sbjct:   68 VKVSINGDTYDVTVNPGDSILEAAEEAGLELPHDCRLGTCLQCTAKVVSGSVDHGMGTLDDEVTEAG----YTLACQATPLSDDVHIEIVEEDEVIDKQFANM 166

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BLAST of mRNA_Ecto-sp6_S_contig100.753.1 vs. uniprot
Match: A0A7S2YSW2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSW2_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 6.800e-12
Identity = 48/127 (37.80%), Postives = 67/127 (52.76%), Query Frame = 0

Query:  119 ITVQPGDSILEAAEM-------SGMNLS--YECRRGNCISCAAKVQNGSSSHFDNWADRIPEDGAP--------DGFVLTCSTHPTGPGVKLDLSANAEMWD-AYCARLDDISTQDLLRQTSAEVMR 227
            + V PG++IL A E        SG N+   ++CRRGNC++C+A  Q+ S S   N  D      +P         G+VLTCS+  TGPGV L L AN ++WD  Y  RL+   T+   R   A+ +R
Sbjct:  109 VPVYPGETILAALERLASSGGTSGANIPPPFDCRRGNCLTCSA--QHTSESAATNLIDTTDNGLSPYVAKTIAERGYVLTCSSTVTGPGVSLTLGANNQLWDYVYRGRLESEETESAARAAMAKAIR 233

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BLAST of mRNA_Ecto-sp6_S_contig100.753.1 vs. uniprot
Match: A0A4D9D796_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D796_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 4.240e-11
Identity = 36/111 (32.43%), Postives = 62/111 (55.86%), Query Frame = 0

Query:  106 WDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAAKVQNGSSSHFDNWADRIPEDGAPDGFVLTCSTHPTGPGVKLDLSANAEMWDAYCARLDDISTQD 216
            WDV++ + GE +V+TV     ILEAAE    ++   CR G C +CA +V     S  +     +  + + +GFVLTC THP GPG++++L     ++++   + +  +T +
Sbjct:   55 WDVKMTYKGETKVLTVSEDTCILEAAEKE-WDVPCSCRNGICTTCAGRVIANPDSKKEA-IHGLSAEQSKNGFVLTCQTHPCGPGLEVELGMYDTVYESQYGQYEKKATTE 163

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BLAST of mRNA_Ecto-sp6_S_contig100.753.1 vs. uniprot
Match: A0A6V1VDI3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VDI3_HETAK)

HSP 1 Score: 69.3 bits (168), Expect = 5.530e-11
Identity = 31/112 (27.68%), Postives = 59/112 (52.68%), Query Frame = 0

Query:  106 WDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAAKVQNGSSS-HFDNWADRIPEDGAPDGFVLTCSTHPTGPGVKLDLSANAEMWDAYCARLDDISTQD 216
            W++E+   G  +++TV   D +LEAAE    +  + CR G C +C+ ++  G    ++      + E     GF ++C TH TGPGVK++L+    +++    + +  + +D
Sbjct:   50 WEIELTLDGVTKMVTVSEADCVLEAAEKVFDDPPFSCRNGVCTTCSCRIVEGKEGENYKLAVHGLGETALSQGFTMSCQTHVTGPGVKIELNQYDTVYEMQYGQYEKGTAKD 161

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BLAST of mRNA_Ecto-sp6_S_contig100.753.1 vs. uniprot
Match: A0A0M0K3H8_9EUKA (Ferredoxin (2fe-2s) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K3H8_9EUKA)

HSP 1 Score: 71.6 bits (174), Expect = 1.140e-10
Identity = 39/105 (37.14%), Postives = 59/105 (56.19%), Query Frame = 0

Query:   98 PRSVLERPWDVE-VDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAAKVQNGSSSHFDNWADR-IPEDGAPDGFVLTCSTHPTGPGVKLDLSANAE 200
            P S   R WDV  V    +R  ++V    S+L AAE++G+    +CRRG C+SCAA+V +GS       +D  + ++   +G VL CS +P GP ++L L A  +
Sbjct:  417 PSSNPSRVWDVTLVSADEQRHTLSVAENQSVLRAAELAGLLPCSDCRRGRCLSCAARVVSGSKFSLAVDSDTALCDEAHVEGIVLLCSAYPRGPNLELKLDAEGD 521

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BLAST of mRNA_Ecto-sp6_S_contig100.753.1 vs. uniprot
Match: A0A7R9YXN5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YXN5_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.360e-10
Identity = 35/94 (37.23%), Postives = 55/94 (58.51%), Query Frame = 0

Query:  140 YECRRGNCISCAAKVQNGSSSHF-----DNWADRIPEDGAPDGFVLTCSTHPTGPGVKLDLSANAEMW-DAYCARLDDISTQDLLRQTSAEVMR 227
            +ECRRGNC++CA +   GS++       D  +  + E+    G+VLTCS++  G GVKLDL +N++ W D + +RL    T+       A++MR
Sbjct:    9 FECRRGNCLTCAGRHAEGSATSNLRRGEDGLSPYLSEEVRGLGYVLTCSSYVEGDGVKLDLGSNSDAWEDVHTSRLQSPETERTGLAAQAKLMR 102

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig100.753.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig100.753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FRL9_ECTSI	1.270e-165	96.34	Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=28...	[more]
A0A836CQ20_9STRA	6.060e-26	36.31	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A0G4EXA3_VITBC	1.160e-12	33.94	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A7S4F9M2_CHRCT	1.280e-12	34.58	Hypothetical protein n=1 Tax=Chrysotila carterae T...	[more]
A0A0G4EFE2_VITBC	2.830e-12	36.89	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A7S2YSW2_9STRA	6.800e-12	37.80	Hypothetical protein n=1 Tax=Amphiprora paludosa T...	[more]
A0A4D9D796_9STRA	4.240e-11	32.43	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A6V1VDI3_HETAK	5.530e-11	27.68	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A0M0K3H8_9EUKA	1.140e-10	37.14	Ferredoxin (2fe-2s) n=1 Tax=Chrysochromulina tobin...	[more]
A0A7R9YXN5_9STRA	3.360e-10	37.23	Hypothetical protein n=1 Tax=Pseudictyota dubia Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 113..187 e-value: 2.8E-10 score: 40.0
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 106..199 score: 11.173
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 98..201 e-value: 8.4E-19 score: 69.3
None	No IPR available	PANTHER	PTHR47354	FAMILY NOT NAMED	coord: 98..195
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 20..26
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..246
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..22 score: 0.729
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 108..195

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig100	contig	Ecto-sp6_S_contig100:512341..516012 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig100.753.1	mRNA_Ecto-sp6_S_contig100.753.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig100 511775..517356 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig100.753.1 ID=prot_Ecto-sp6_S_contig100.753.1|Name=mRNA_Ecto-sp6_S_contig100.753.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=247bp
MPPFAHRAAATAALLLCPLSSAFVPALPSPHERRPAAVGRGLVAATTPAV
AQTTSRACSTRPRAKRGLHATELGAAADRGGGGEECGDEGKGGEEKPPRS
VLERPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISC
AAKVQNGSSSHFDNWADRIPEDGAPDGFVLTCSTHPTGPGVKLDLSANAE
MWDAYCARLDDISTQDLLRQTSAEVMRKYRVEHPDYFREEVERQFK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001041	2Fe-2S_ferredoxin-type
IPR012675	Beta-grasp_dom_sf
IPR036010	2Fe-2S_ferredoxin-like_sf