Homology
BLAST of mRNA_Ecto-sp6_S_contig100.748.1 vs. uniprot
Match:
D7FRM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRM4_ECTSI)
HSP 1 Score: 879 bits (2270), Expect = 0.000e+0
Identity = 450/458 (98.25%), Postives = 453/458 (98.91%), Query Frame = 3
Query: 24 MEEFLAAAKGGVTSISGDQWVAILRRFSTAHEATWAVSPVCGLDNKRILVRVVVELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQEALETYTKAAQEDGDATCGFRVSLMALKCLNNAVWDQPKGQISFVQLGGLDTLVGLLQASRPASVLYFACRIFNVVGSSNPTAFNELKKKQDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQALQGLFLLGVRFTPEEKKKALEGDTMKRLGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVWEQRLEREKRELASLTGDDYKRAEKLSKDKRVHPVDAPKGTLRARCLKQMTATESSSKTAVSDLLFNLCADEEEFTTRCGFGNAVNTLRLRGMISVPGIG 1397
MEEFLAAAKGGVTSISGDQWVAILRRFSTAHEATWAVSPVCGLDNKRILVRVVVELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQEALETYTKAAQEDGDA CGFRVSLMALKCLNNAVWDQPKGQISFVQLGGLD LVGLLQASRPASVLYFACRIFNVVGSSNPTAFNELKKKQDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQALQGLFLLGVRFT EEKKKALEGDTMKRLGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVW+QRLEREKRELASLTGD+YKRAEK+SKDKRVHPVDAPKGTLRAR LKQMTATESSSKTAVSDLLFNLC DEEEFTTRCGFGNAVNTLRLRGMISVPGIG
Sbjct: 1 MEEFLAAAKGGVTSISGDQWVAILRRFSTAHEATWAVSPVCGLDNKRILVRVVVELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQEALETYTKAAQEDGDAACGFRVSLMALKCLNNAVWDQPKGQISFVQLGGLDMLVGLLQASRPASVLYFACRIFNVVGSSNPTAFNELKKKQDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQALQGLFLLGVRFTQEEKKKALEGDTMKRLGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVWKQRLEREKRELASLTGDNYKRAEKISKDKRVHPVDAPKGTLRARFLKQMTATESSSKTAVSDLLFNLCVDEEEFTTRCGFGNAVNTLRLRGMISVPGIG 458
BLAST of mRNA_Ecto-sp6_S_contig100.748.1 vs. uniprot
Match:
A0A835YV73_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV73_9STRA)
HSP 1 Score: 149 bits (376), Expect = 1.340e-34
Identity = 152/572 (26.57%), Postives = 224/572 (39.16%), Query Frame = 3
Query: 78 QWVAILRRFSTAHEATWAVSPVCGLDNKRILVRVVVELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQEALETYTKAAQEDGDATCGFRVSLMALKCLNNAVWDQ---PKGQISFVQLGGLDTL-------------------VGLLQASRPASVLY-----------------------------FACRIFNVVGSSNPTAFNELKKK---------------------QDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQ----------------------------------------ALQGLFLLG---------VRFTPEEKKKALEGDTMKRLGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVWEQRLEREKRELASLTGDDYKRAEKLSKDKRVHPVDAPKGTLRARCLKQMTATESSSKTAVSDLLFNLC---ADEEEFTT--------------RCGFGNAVNTLRLRGMI 1379
+W L F++ H + + CG K +V V++ + + R+ ++A AL AA++LLRE +G+ LM EA E Y KAAQE DA GF V+ + CL N + + PK ++ L L LL +RPA +L+ A R + ++ A +++ L++L+S+LA CVRC PPFP G L + L+ L+ L + E L + RLG VL + L L H + + KL V+NLL+ MP +A L E+G LP +V++ ELQL+ EF+ D A L P L VL ++ E + +K IFP E D WEQ R D A K +++R+HP DAP G+LRAR + +T ES+S+ +LL+ LC A E+ R GFG+ V LR RG++
Sbjct: 22 EWRDALSAFASEHSTSAGILQACGEAAKDKVVAAVLQ------AMQPQKRADAAALSLQAAALSAAKVLLREAQGSAPLMTMEASEVYLKAAQESRDADEGFAVATAGVSCLVNLLVHEAAAPKPVVAANMLVALPRASTAPRSXXXXXXXXXXXXXXXLLGGARPAPLLHNSXXXXXXXXXXXXXXXXXXXXXXXXXXXLAARALYRLCATRAPAAAVVREGCAXXXXXXXXXXXXXAGTGDCGKTLVILVSLLAWCVRCEDPPFPQGAGVAPLATEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVLKLLYFLASTGAVDVERAQGAAREVITVLGQALLLRLGQVLAEALLLPHDRAEAYECKLHVVNLLMHMPATYALYLSENGILPSLVRITELQLLACEFEADTFDPAVGLAPILAVLAAAAGSAAEPRRILKALIFPAETDAQWEQYQRRP-------AAQDEAEA-KAERERRMHPADAPPGSLRARLIACLTMVESTSRRFAGELLWALCEGSAGEDXXXXXXXXXXXXXXXXXYRVGFGSGVGLLRTRGLL 579
BLAST of mRNA_Ecto-sp6_S_contig100.748.1 vs. uniprot
Match:
A0A7S2XIN1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIN1_9STRA)
HSP 1 Score: 140 bits (354), Expect = 1.250e-31
Identity = 106/353 (30.03%), Postives = 178/353 (50.42%), Query Frame = 3
Query: 423 VWDQPKGQISFVQLGGLDTLVGLL--QASRPASVLYFACRIFNVVGS------SNPTAFNELKKKQ----------DLLLLLLSVLAGCVRCTHPPFPG---GEDRVKLMVQALQGLFLL-------GVRFTPEEKKKALEGDTMKRLGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDA--AAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVWEQRLEREKRELASLTGDDYKRAEKLSKDKRVHPVDAPKGTLRARCLKQMTATESSSKTAVSDLLFNLC-ADEEEFTTRCGFGNAVNTLRLRGMISVP 1388
VW Q + G+ L+ LL + S A +L + N++GS TA EL +K+ D+ +L+ L ++ + P FPG + R L ++ L+ L+ L R + E ++ D MK++G +L IL+L + V+ KL +NLL+D P +A++LL +G +P ++ +++LQ+ + ++GG A + P L V+N+ A+ + VK +FP D+ ++ E+ + + G + + P+DAPKGTLR ++ MTATES+SK S+LL+ LC AD EF R GFGNAV+ L ++G++ +P
Sbjct: 270 VWSTKARQELIDSVNGIPILMDLLLSKVSSTALLLSIVRNVHNLIGSVPGVVNKMDTAIEELIEKRAPDDFVKGGTDITSVLVETLTWTIK-SEPSFPGDASSDRRADLALEILRVLYALRNGQIAGSQRGSFSEIQEKRIEDNMKKMGALLCAILNLPNENKQVYDVKLAAINLLMDAPIEYAQILLTNGNIPSLLMILDLQVTKVVVEEGGAKTSNATSIIPILAVMNRFSAANPCIQNIVKEDVFPTNHDDGTVDEVKTEEMDNEAPGG------------RNMRPMDAPKGTLRYNIIQLMTATESNSKRLASELLWTLCDADPNEFVRRTGFGNAVHMLGMKGLVKLP 609
BLAST of mRNA_Ecto-sp6_S_contig100.748.1 vs. uniprot
Match:
A0A7S2G9N3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G9N3_9STRA)
HSP 1 Score: 95.5 bits (236), Expect = 3.530e-19
Identity = 57/149 (38.26%), Postives = 85/149 (57.05%), Query Frame = 3
Query: 948 LVRQEFQDGGV-DAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVWEQRLEREKRELASLTGDDYKRAEKLSKD-KRVHPVDAPKGTLRARCLKQMTATESSSKTAVSDLLFNLCADE-EEFTTRCGFGNAVNTLRLRGMISV 1385
++R+ DG D + P ++ L K+ ASE++K +K +FPP+AD W++RL +K E +TG+D K +D +R+HPVDAP G+LR K + E +K V +LL LC EFT R G+GNAV ++G IS+
Sbjct: 15 MLRENSPDGRQGDLRTYVLPVVIALKKVAEASEDAKAMMKTLLFPPDADRAWKERLVAQKLEDDEVTGEDEIAERKKERDAERMHPVDAPDGSLRKVLFKVICCIEEHTKRTVCELLLELCDQNMNEFTLRAGYGNAVFMHHIKGAISI 163
BLAST of mRNA_Ecto-sp6_S_contig100.748.1 vs. uniprot
Match:
F0YKC8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKC8_AURAN)
HSP 1 Score: 96.7 bits (239), Expect = 1.190e-17
Identity = 74/207 (35.75%), Postives = 106/207 (51.21%), Query Frame = 3
Query: 780 LGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVWEQRLEREKRELASLTGDDYKRAEKLSKD---KRVHPVDAPKGTLRARCLKQMTATESSSKTAVSDLLFNLC-ADEEEFTTRCGFGNAVNTLRLRGMISVP 1388
+G L +L A DV A L +NLL P + L+E+G +PR+ L+E L ++ L P L K+ AS + K +K IFPPEAD VW +L K A GD E L K+ R+HPVDAP+ R+ LK M E +K V++L++ LC D +EFT RCG GNA+ L+++ ++ +P
Sbjct: 224 IGVCLRAVLCGARAPYDVPPACLDAVNLLTCAPKTYYCWLVENGAVPRLCNLLEGILNDYVVENKYESPETTLPPLLDAFLKLCAASSKGKRQLKEWIFPPEADAVWMPKLAEAK---ARAKGD-----EALQKEFDAARIHPVDAPRYATRSLLLKLMCDLEPVTKRLVAELVWALCDEDADEFTVRCGVGNAIAFLQIKKLMPMP 422
BLAST of mRNA_Ecto-sp6_S_contig100.748.1 vs. uniprot
Match:
A0A7S1BQP5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQP5_9STRA)
HSP 1 Score: 96.7 bits (239), Expect = 2.880e-17
Identity = 79/262 (30.15%), Postives = 134/262 (51.15%), Query Frame = 3
Query: 666 GEDRVKLMVQALQGLFLLGVRFTPEEKKKA------LEGDTMKRLGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDG-------------GVDAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVWEQRLEREKRELASLTG-DDYKRAEKLSKDKRVHPVDAPKGTLRARCLKQMTATESSSKTAVSDLLFNLCADEEE-FTTRCGFGNAVNTLRLRGMISVP 1388
GE R ++V+ L+ ++ L + E + + + +TM LG +L ++L +A I ++ KL V+ LL+D+P G++ LL +G + +V ++ LQL+ + G DA+ L P L+VL+K+ A+ V +FPPE E +E+ +E+ E L D+ A GTL+ +K MT+T+S+ K S+LL+ LC + ++ F + GFGNA+ TL L+G+IS+P
Sbjct: 331 GELRSGVVVEILRFMYTLNFNHSSELLETSSCNIAGADEETMTHLGVILCEMLQFPNANIYLYEIKLGVVKLLMDLPEGYSFYLLLNGGIDPLVDILTLQLLFNTIEGAPISSEWNHRSGTNGNDASVALLPVLVVLSKLCKANTTICSQVHDRVFPPE--EKYEKGGTKEENEKLILEKCPDFSTATFY-------------GTLQDMLIKLMTSTDSNIKRTTSELLWILCNENKDMFVEKTGFGNAIYTLCLKGLISMP 577
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.748.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 6
0 1 Expect = 0.00e+0 / Id = 98.25 Expect = 1.34e-34 / Id = 26.57 Expect = 1.25e-31 / Id = 30.03 Expect = 3.53e-19 / Id = 38.26 Expect = 1.19e-17 / Id = 35.75 Expect = 2.88e-17 / Id = 30.15 Sequence D7FRM4_ECTSI A0A835YV73_9STRA A0A7S2XIN1_9STRA A0A7S2G9N3_9STRA F0YKC8_AURAN A0A7S1BQP5_9STRA back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 142.9 Seed ortholog evalue 3.7e-31 Seed eggNOG ortholog 35128.Thaps5615 Preferred name RIC8B Model size 1908 Hectar predicted targeting category other localisation GOs GO:0000226,GO:0000278,GO:0001667,GO:0001701,GO:0001703,GO:0001944,GO:0001965,GO:0003008,GO:0003674,GO:0005085,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005818,GO:0005819,GO:0005828,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005886,GO:0005938,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007186,GO:0007187,GO:0007188,GO:0007193,GO:0007275,GO:0007369,GO:0007399,GO:0007405,GO:0007610,GO:0007611,GO:0007612,GO:0007632,GO:0008047,GO:0008104,GO:0008150,GO:0008277,GO:0008283,GO:0008306,GO:0008356,GO:0008542,GO:0009314,GO:0009416,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009966,GO:0009968,GO:0009987,GO:0010004,GO:0010646,GO:0010648,GO:0015630,GO:0016020,GO:0016043,GO:0016477,GO:0017145,GO:0019899,GO:0022008,GO:0022402,GO:0022610,GO:0023051,GO:0023052,GO:0023057,GO:0030154,GO:0030198,GO:0030234,GO:0030695,GO:0031647,GO:0032501,GO:0032502,GO:0032878,GO:0033036,GO:0034613,GO:0036445,GO:0040001,GO:0040011,GO:0042074,GO:0043009,GO:0043062,GO:0043085,GO:0043087,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043473,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0048066,GO:0048103,GO:0048468,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048598,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050790,GO:0050794,GO:0050795,GO:0050821,GO:0050877,GO:0050890,GO:0050896,GO:0050931,GO:0051020,GO:0051179,GO:0051234,GO:0051293,GO:0051301,GO:0051336,GO:0051345,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051674,GO:0051716,GO:0055057,GO:0060259,GO:0060589,GO:0061351,GO:0065007,GO:0065008,GO:0065009,GO:0070285,GO:0070586,GO:0070727,GO:0071711,GO:0071840,GO:0071944,GO:0072089,GO:0072358,GO:0072359,GO:0072697,GO:0090036,GO:0090038,GO:0098609,GO:0098742,GO:0098772,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:1902531,GO:1902532,GO:1902850,GO:1903047,GO:1990778,GO:2000114 Exons 12 EggNOG free text desc. cell-cell adhesion involved in gastrulation EggNOG OGs 2XDTP@2836,KOG4464@1,KOG4464@2759 Ec32 ortholog description Armadillo-type fold Ec32 ortholog Ec-12_002500.1 Cds size 1377 COG Functional cat. S Best tax level Bacillariophyta Best eggNOG OG NA|NA|NA
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348725.7665029-UTR-Ecto-sp6_S_contig100:471592..472100 1682348725.7665029-UTR-Ecto-sp6_S_contig100:471592..472100 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig100 471593..472100 - 1682348725.8856716-UTR-Ecto-sp6_S_contig100:478127..478150 1682348725.8856716-UTR-Ecto-sp6_S_contig100:478127..478150 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig100 478128..478150 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348725.7757719-CDS-Ecto-sp6_S_contig100:472100..472186 1682348725.7757719-CDS-Ecto-sp6_S_contig100:472100..472186 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 472101..472186 - 1682348725.7831929-CDS-Ecto-sp6_S_contig100:472382..472602 1682348725.7831929-CDS-Ecto-sp6_S_contig100:472382..472602 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 472383..472602 - 1682348725.7904894-CDS-Ecto-sp6_S_contig100:473133..473254 1682348725.7904894-CDS-Ecto-sp6_S_contig100:473133..473254 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 473134..473254 - 1682348725.7977023-CDS-Ecto-sp6_S_contig100:473525..473647 1682348725.7977023-CDS-Ecto-sp6_S_contig100:473525..473647 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 473526..473647 - 1682348725.8051376-CDS-Ecto-sp6_S_contig100:474168..474241 1682348725.8051376-CDS-Ecto-sp6_S_contig100:474168..474241 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 474169..474241 - 1682348725.8123345-CDS-Ecto-sp6_S_contig100:474727..474765 1682348725.8123345-CDS-Ecto-sp6_S_contig100:474727..474765 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 474728..474765 - 1682348725.8197143-CDS-Ecto-sp6_S_contig100:474987..475107 1682348725.8197143-CDS-Ecto-sp6_S_contig100:474987..475107 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 474988..475107 - 1682348725.8268836-CDS-Ecto-sp6_S_contig100:475332..475455 1682348725.8268836-CDS-Ecto-sp6_S_contig100:475332..475455 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 475333..475455 - 1682348725.840675-CDS-Ecto-sp6_S_contig100:475907..476078 1682348725.840675-CDS-Ecto-sp6_S_contig100:475907..476078 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 475908..476078 - 1682348725.8506875-CDS-Ecto-sp6_S_contig100:476630..476707 1682348725.8506875-CDS-Ecto-sp6_S_contig100:476630..476707 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 476631..476707 - 1682348725.866411-CDS-Ecto-sp6_S_contig100:477643..477772 1682348725.866411-CDS-Ecto-sp6_S_contig100:477643..477772 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 477644..477772 - 1682348725.877027-CDS-Ecto-sp6_S_contig100:478030..478127 1682348725.877027-CDS-Ecto-sp6_S_contig100:478030..478127 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 478031..478127 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.748.1
>prot_Ecto-sp6_S_contig100.748.1 ID=prot_Ecto-sp6_S_contig100.748.1|Name=mRNA_Ecto-sp6_S_contig100.748.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=459bp
MEEFLAAAKGGVTSISGDQWVAILRRFSTAHEATWAVSPVCGLDNKRILV back to top mRNA from alignment at Ecto-sp6_S_contig100:471593..478150-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.748.1 ID=mRNA_Ecto-sp6_S_contig100.748.1|Name=mRNA_Ecto-sp6_S_contig100.748.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6558bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:471593..478150- (Ectocarpus species6 EcLAC_371)AGCCACAGCAGCAGGGAGTGGTG ATGGAAGAGTTCCTCGCTGCCGCCAAG
GGCGGAGTGACATCGATATCTGGAGATCAGTGGGTAGCCATCCTGCGACG
CTTCTCAACTGCTCACGAAG GTAGGTTCATCGTTGGATCCGAAGGGTGTA
CCTGTTCCTGCGAGTACTCTCTCTCAACACAACAACATGTGCAACACTAC
TGCTGTACTGTACACCGGCATCAACGCACCAGAGTCTACAGCGCACTCAG
CTTCGGACATTGCGAGTGGCGAGTAGACCCAAGAATTAGGTTATTTCCGT
GAGTAGGCCATGTGTTAAACTTTTGGTTTGCCGCTGTATCCTGGCCGAAA
TTGCTCTTGTCTTCTTTGTCGCATTCAGCGACCTGGGCGGTGAGTCCTGT
CTGTGGGCTCGACAACAAGCGGATTCTCGTGCGAGTGGTGGTGGAGCTTC
TCCACCATACCGTTGGGTTGAATGGGAGACACAGGAGCCGGACTCTTGGT
CCGGGAG GTGAGGTCTCGGCAGTTGCACCCTGCTGCCCGATTAGGTAAAA
TAGTGGTGCGGACCGTTCTCGAGCACAAGCGTATCGGTGCATCCGGCGGG
GCGCCAACAGCTGTAGAATATTTGACTACAAGCAGTCTAGCCACGTGCAC
GCTTATGTGGAAAAGCGTGTGGATGGAACGTTGATTCCAATTGCGCCATA
TGCCGTCGTAAGTTCCTGGACCGTTGTGTGAATGTTGGTATACTCCAGAC
TATGCGTGGTGTCTACCGTGGGTTGCGTAAGATACCACCCCCCCCCCGGG
GCCAATCAAAGCTCGAGTACTCTTCAGCTCTGCAGCGAAAACAATCGCGG
TGCCGACAATGGCGGCGTTGGAACCATCTTGTCGAGAGCTTTTCGAGCAA
ATATCACTTGACTTTGCGTCCTCTTCGTCATGGAGTAATGGAGCTGTGCA
AATCGATCCAAGGGGTATGGTATCTCATGCAGCAACCTAAGGTTTTTGTA
TGGGCAACCAACTTGTATTGCATAGCAATGCACAGCTACAAACGTGTATG
CTGATCCGATACGGCAGAGCCAACGCGCAACTGTATAAAGAGCCCATACC
GGCTACTGGATGGGTGCTGTTGTTGCTCAAACTAACCATTAGTGGAGACA
CGATGGGTGCTCTTCCCCTCTGAATATGTCAATGACGTATACGTATCCAG
CACGAAATAGTACCAGACATTCATGCCGCGCCTCCTTGTCTTCGTCCCTG
GTTTTTGAGGACTTCTATGCAATGTCGGCTTATCCCATTCTTCTAGAGGA
ATACAGTCATCGAACAAACCGCAGCGGCTCACCCCTTCTTCTATGACAGT
GTATACATACCCATACCAACCTTCGCTTGCACGGAATCGCTTTGTTATCG
TTTGCTGTGCTTGTTACTTTGTACTGCTGCTGGATGTTGGCAGTGGAGGC
TGAGGCACTGTTGGCGGCTCGGATACTGCTGAGAGAGAGGGAGGGAGCTG
AGAGGCTCATGGACCAGGAG GTCTGTTGAGAGGCAGTTGTTCCCTACTCT
TACAGCAAAGATTTGTTTTAGCAAAGCGTTTCTTGCAGTATCTCAATTGA
TGTTGTGTCGGGAGGTAGTTGAGAGTTCGGAGGGATGTAGGCCAGGTTCG
CCATAACTGCATGCACTGCGGCACAGTAGTTTTATGCAGAAATTCGTAGT
AAACGGCGACCGTGTCGTGTCCGTTAATGCAATAGTCTTAAGCGGTTTAG
AGCCAACCATTGCGTGTATGATAGACACAAGTATGAGGCTCGTTCAGCCG
GCGCAGCGTGGCATCCAAGGGCGAGGCGATGACCGAAGGAGTAAGAATAA
TGGTAGGAGCTGTGAGATAGTTTGCACGTCTTGCTTGAGCGCGGGGGACT
TAGTTCTCCGCGGTTCGAGCCCAGCACGTGTAATGTACTGCGCCGGCTGC
TACATCTACCTAGTGTTTTCATCATGGTGGCACTGGCATCCACATGACCC
AGTGCCAACGAGTCAAGCGTTGCTATTCCCAAGCCGCTATCCGCGCGCGT
ACTCGTCGCTATTTTCCTCCAGGCTCTGGAGACTTACACCAAGGCTGCAC
AGGAGGATGGCGACGCGACATGTGGGTTCCGCGTGAGCTTAATGGCCCTG
AAGTGCCTGAACAATGCCGTGTGGGACCAGCCGAAGGGGCAGATCTCCTT
CGTGCAGCTGGGGGGACTGGACACGCTGGTCGGTCTGCTGCAG GTGAAGC
AGTACAGTAGAGGGCGCCTGAGGCTTTACAACATGATTGTCTGCAGTCTG
TCGTACGAGACACGGTTCGTTTCAAGCAGTGGGTCTGGATGCGAAGCTTC
TTGGGCAGTGCTACGATGTTTCCAACATGAGAATCCGAAACGCGCCTCAC
CATACACCTGTTCTTCAACAGATGATTGTGTTTTCCCTCTTTTTCTTGAC
GAACACACCCGCGTTGTTTCTTGAACCCCCTACACACCTTCTTGGCTCGG
AGGTCGTCCAGCACTAGAAGCACCGCCGCAAGTGTTGCGTCTGCGCAGGA
CTGCAGTGCAAGCCTTGATTTTCCCGCTCATGCTCCGCAGAAGATGGCTT
GAAGGCTGTGTGCACGTGAATCGTGTTTCGATTGCTCAAACACGTGACGT
TCCCTTGGTCTTGTCCGCACGCACATTGCACTGCTGTAAACGCAGGCCTC
TCGACCAGCGTCCGTGCTGTACTTCGCGTGCCGCATCTTCAACGTCGTCG
GTTCCTCCAACCCCACCGCCTTCAACGAGCTCAAGAAGAAGCAAGACTTG
CTGCTGCTGCTGCTCTCG GTGGGTCCTCCGCATCGTTTCCTGTCGTACAT
GACAGGGGTCGTGGTGGTGGTTCGGTTCGGCGATATGGCGTGTCTTGTCT
CTTGAATAGAAACAATTATGTACCGTGCTTTTGCCCTGATGGATTTTCGT
CTCCGCGTATGCCTCGGCGGTTCCTCCAACTTTTGCAAGAGACCTATACT
GCTGGTAACTGGAAAGCTGCTGGTCGCCCCGAACGTGTTGTAGGTCCTAG
CTGGCTGCGTTCGGTGCACGCATCCGCCGTTTCCGGGAGGCGAGGACCGT
GTCAAGCTCATGGTGCAAGCGCTGCAGGGCCTCTTTCTTCTGGGCGTCCG
ATTCACACCAGAG GTGACTCTTAAGTATTATGTTGTGCTTCTCCTTCTTC
TTGCTGTTGTTGGTGTTGGTGTTGGTGTTGTCCATATTGCTGTTGTTCTG
TGGTCACTCTCGTACCGGTGGAGAAGTGTGCGGGTGCATAACTCGCGTTG
CTGCTGGCTCTTGTCGCACCCTTGTTCTGTTTGATGTACACCATACACAA
CTTCGGTACACGGGGTGACGGACTGGCCCCGACAGGAGAAGAAAAAAGCT
TTGGAAGGGGACACCATGAAGCG GTGAGTGTGGTATTCGAACAGTCGGTG
TAGCTGAACATGACCTGATTTGCGACCCACATTTGCCTCTCATGGGCAGC
AGGTTACTTTGTACAAAACTTTTTTTTTTTTACGTTGAACTGGAGCGGAG
CAGAGCAATCTGATCACACAACGTCCGTGCTGTGCGCACTCACCCTTGCC
TCGCCAAGCTGCTAAAGCCACGGGAATTCACACAGAACATGCCGCAGCTT
TGTGAGGCATAGGGAATCTCAACAGTGCTATCCCTTAGAAACACTCCCGA
TACCGTTACAGCACACTGCTGCAGTACAGTGGGAACGGAACGAAAAGTTG
ATGCCCTCTGTGTCACTCAAGCTGTGGTCGGTAGTTTGTTTGTTTAGTGT
ACCCCTAGAGCAGCTGCTACTCTTCCTTAAATCTCAAATCCTCGAGTCTA
CTTTTGCCTAACCCCTCCCTCGATTTCCGTGTTTGGCGGGGTGTGGTCTC
CGTGCTCAGGCTCGGGTACGTGTTGGTGGACATCTTGCATTTGGACCACG
CAGAGATCGACGTCTTCATGGCCAAGCTACAA GTAAGCGACGGTCTTGAG
CGGCGTGCCACAAAACCTTTCATTCTGGCGCCAGCGCACTACGCCTTCTG
CGCACACACCCAGGACCAAAGAAAACGAAAAGGAAACATGTACATTTAAA
GAAAAGGCGGCTGTCGCCCGAACACCCGTTCTTTCGATCGCTAGCTGTTT
TCCCTTGAACCGCACGCAAAACAAGACAAGACAAGACAAGACAAGACAAG
ACGAGAGCCGTGCACTCACTTGCGTTCCTTACACAATTACTTCTTCGGCT
TGATCTGGACAATGCTCGTATCGGCATACACGTACCACATGCAGCGCAGG
CGGCTGCAGGGGTGAAGCTAAAAGAGGGGGGGGGAGGCACAGAACCGCAA
TAAGTCCTTGGTGTTCTCGTTCTGTGGGCCATGTCCCCTGGCGCGAACAC
TACAGTGGGTGCCACAGGGGAAAGTCACAATGTCTCGAAGGCGAGACACT
CCATCCTCTGTGCGACGTGATTTTTATTCTTGTTCCATGTCTGGTATTTG
CAGGTGCTGAACTTGCTGCTAGACATGCCTGGTGGCTTTGCGGAGGTGCT
GCTTGAGCACGGCTGTCTCCCTCGAGTTGTCCAGCTCGTGGAGCTCCAGC
TTGTGCGACAAGAGTTCCAGGATGG GTGAGTAGTAAAAGCCTATGGTAGA
TACCGGTAGATTTTACCGTATCCGTCCAACCCGACGTAGACCCGACTCGA
ATGGAGCACCTGACGACTTGCTGGCGGGCCATATTGAATACGCTGTCTCG
ACTCTCTCTTGTGCTTGCTTCGTCTCAAGGACCCACATATTCTGACCCAT
GGTGCTAGTAGCAAACACGAGCCAGAACAAAATTATTGCTCATTTTTTCC
CCCACCTCTTTGCCTCGTGTCGTAACCGGCACTCGTTCCTCGACAGCGGT
GTCGACGCAGCCGCTGAGCTAACCCCTGGGCTGCTGGTGTTGAATAAGAT
GGTGCTGGCATCGGAAGAGTCCAAGATGGCCGTGAAGAGAGCGATATTTC
CCCCCGAGGCTGATGAG GTGGGAGATGATCAATAGGGAGGAACGTTTGGG
TACACCTGGCTGGAGTCGAGCGCAACGCAGGAGAGGAATCCTGTACCTCC
CCGTTTATGCGATTGCTGACCCCGAAGCTCGCTTGAAACACCAAACCGGC
ATGGTTCAATTTGTGTGCTTTGGTGGCAGACGATTTTTGCCCACAGCAAA
AAGCGTGATGAGTACTTCAACCTCAATATACGGACTTTGGGAACACAAGC
AATCATCACCAACCACTGCTCAATTGCGCCTTTGCGAGTGATCCAGCGAC
AGCATGCCGCACCGTGACAACAAGGCCACATGATATTGTCTCGTTTTCAT
GCTGCATCAACATCCCATGGTGTCATATAGCCTCACAAGGTACACGCAAG
TGGGTTTACCACTGCACCAGGGCATGAATTTTTGCTGAGACTCGAGATGC
CATGTCTCAGCGTGCCGAAGGTTCTGATCATCAGTACCCTATCCGCACGC
TATTGTGAACATCCCGCCTCTCTTTATCCGCGCTCCTTGCTCTGGTAGGT
GTGGGAGCAGAGGCTGGAGCGAGAGAAGAGAGAGCTCGCATCTCTAACAG
GCGATGACTACAAGAGAGCCGAAAAACTCAGCAAGGACAAGAGGGTTCAC
CCCGTGGACGCGCCGAAGGGGACGCTTAGAGCCAGGTGCCTGAAGCAGAT
GACGGCAACAGAGTCCTCCTCGAAAACGGCAGTGTCTGATCTGCTGTTCA
ATCTCTGCGCAGACGAAG GTGCGGCGAGTGCGTGGCGTGGTGATCGAGAT
TTAGTGCAGCGGAAAATGCCACCCTCCTCTTGTTTGTAGGTTTCGCCACG
ACCAAGGCAGAGCTCGCAGCCAGTCTCTTGTGAAGGGGTTGCGCAAGATT
GTTCGTGCTCTGTACGATATACTCACATGCCTCGTGCTCGCCTCGTCTCG
TTACCCTTGCGCAGAAGAGTTCACCACAAGGTGCGGCTTTGGGAACGCCG
TCAACACCCTTAGGCTCCGAGGGATGATTTCGGTGCCTGGCATAGGATGA
GTTGGTGCCAAGGGACTTTCAAAACATCTGTTGGATTGCAGAGGATGTGT
TGTACCGAGAAGTCACGGGCGTCTCATGCCGCATTTGCAAGCAGCGTGAC
CATGCAGTCGGTGTCTGATATTGTATCTAACTTGCGCGCTGTCACCTGTA
ACTTCTAGTAGTTTTAACGTTTTTAACTTTTAACAAGTACATGCATGCTT
GTACCTGGTTGAAGTAAATCAAGAGTGGGACCGACACACCACGAACGTTT
GTGTCTTGCATAGTGCACGAGTTGGTAGACTATGTAGACTATTATTGTAA
AAGCATACCGTGGTTGTCTTTTTAACCAAGATCTGACTGGACCACCGAGG
GGGACAACACACGAGGAAATAAGCGAAGAGTCCAAAATGGACTGCGTTCC
AAACTGGGCGTGGGGGTTGACAGACTGTCTACTGCTGTAGATGCCTATTG
TACGAAGACTACATAGAGCAGCGGCAGTGCTTCGACTACAAAGTACTTGT
AGACATAG back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:471593..478150-
>mRNA_Ecto-sp6_S_contig100.748.1 ID=mRNA_Ecto-sp6_S_contig100.748.1|Name=mRNA_Ecto-sp6_S_contig100.748.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1377bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:471593..478150- (Ectocarpus species6 EcLAC_371) back to top