mRNA_Ecto-sp6_S_contig100.747.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig100.747.1
Unique NamemRNA_Ecto-sp6_S_contig100.747.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig100.747.1 vs. uniprot
Match: A0A6H5K5M3_9PHAE (S1 motif domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5M3_9PHAE)

HSP 1 Score: 621 bits (1601), Expect = 4.070e-219
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 2 
Query:   20 MAAQVVVPPVQGKAEMALDAARVYAEEEAKRKRLECRFYEAQYPEIEEVVMVNVRNIAEMGAYVVLLEYNDIEGMILLSELSRRRIRSINKLIRVNRNEVAMVLRVDKEKGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSTKVSWPLYKKYGHAFDAFKLTLQDEEDVFVGLDIDEETKQAMITHIKRRLAPQPSKVRADIEVTCYTYEGIDAVKAALIAGKAVGDERTPIQIKLIAPPRYVMDTMTLDKDLGKSVLEKAIEVVTEKIIESGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPEDV 1012
            MAAQVVVPPVQGKAEMALDAARVYAEEEAKRKRLECRFYEAQYPEIEEVVMVNVRNIAEMGAYVVLLEYNDIEGMILLSELSRRRIRSINKLIRVNRNEVAMVLRVDKEKGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSTKVSWPLYKKYGHAFDAFKLTLQDEEDVFVGLDIDEETKQAMITHIKRRLAPQPSKVRADIEVTCYTYEGIDAVKAALIAGKAVGDERTPIQIKLIAPPRYVMDTMTLDKDLGKSVLEKAIEVVTEKIIESGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPEDV
Sbjct:    1 MAAQVVVPPVQGKAEMALDAARVYAEEEAKRKRLECRFYEAQYPEIEEVVMVNVRNIAEMGAYVVLLEYNDIEGMILLSELSRRRIRSINKLIRVNRNEVAMVLRVDKEKGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSTKVSWPLYKKYGHAFDAFKLTLQDEEDVFVGLDIDEETKQAMITHIKRRLAPQPSKVRADIEVTCYTYEGIDAVKAALIAGKAVGDERTPIQIKLIAPPRYVMDTMTLDKDLGKSVLEKAIEVVTEKIIESGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPEDV 331
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BLAST of mRNA_Ecto-sp6_S_contig100.747.1 vs. uniprot
Match: A0A835YGW1_9STRA (Eukaryotic translation initiation factor 2 alpha subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGW1_9STRA)

HSP 1 Score: 462 bits (1188), Expect = 1.130e-156
Identity = 240/314 (76.43%), Postives = 277/314 (88.22%), Query Frame = 2 
Query:   83 RVYAEEEAKRKRLECRFYEAQYPEIEEVVMVNVRNIAEMGAYVVLLEYNDIEGMILLSELSRRRIRSINKLIRVNRNEVAMVLRVDKEKGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSTKVSWPLYKKYGHAFDAFKLTL----QDEEDVFVGLDIDEETKQAMITHIKRRLAPQPSKVRADIEVTCYTYEGIDAVKAALIAGKAVGDERTPIQIKLIAPPRYVMDTMTLDKDLGKSVLEKAIEVVTEKIIESGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPEDV 1012
            RVY  EE  R RLECRFYEAQ+PEIE+VVMVNVRNIA+MGAYVVLLEYN+IEGMILLSELSRRRIRSIN+LIRVNRNEVAMVLRVD+EKGYIDLSKRRVSPED+AKCEDRYNKAKAVHS+LRHVA+LRG  +EDL T+V WPL ++YG A DAFKL L    ++E DVF GLD+D+ T+ ++IT+I+RRLAPQP K+R DIE+TCYTYEG+DA++ +L AG  VG+E   I+IKLIAPPRY +DTMTLDKD GK+ LEKAIEV+T +I E GG+LEVK+APKAVSQREESEL AM+ERLALENEEIDGDAPEDV
Sbjct:   10 RVYLPEE--RARLECRFYEAQFPEIEDVVMVNVRNIADMGAYVVLLEYNNIEGMILLSELSRRRIRSINRLIRVNRNEVAMVLRVDREKGYIDLSKRRVSPEDIAKCEDRYNKAKAVHSILRHVAELRGASVEDLYTRVGWPLQRRYGSAHDAFKLCLAGGEEEENDVFAGLDVDDNTRASLITYIRRRLAPQPIKIRGDIEITCYTYEGVDAIRESLQAGIDVGNEDMVIKIKLIAPPRYTIDTMTLDKDAGKAALEKAIEVITARIAEKGGRLEVKLAPKAVSQREESELAAMMERLALENEEIDGDAPEDV 321
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BLAST of mRNA_Ecto-sp6_S_contig100.747.1 vs. uniprot
Match: A0A6U2GSC0_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2GSC0_9STRA)

HSP 1 Score: 413 bits (1062), Expect = 2.240e-137
Identity = 210/315 (66.67%), Postives = 261/315 (82.86%), Query Frame = 2 
Query:   83 RVYAEEEAKRKRLECRFYEAQYPEIEEVVMVNVRNIAEMGAYVVLLEYNDIEGMILLSELSRRRIRSINKLIRVNRNEVAMVLRVDKEKGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSTKVSWPLYKKYGHAFDAFKLTLQDE------EDVFVGLDIDEETKQAMITHIKRRLAPQPSKVRADIEVTCYTYEGIDAVKAALIAGKAVGDERTPIQIKLIAPPRYVMDTMTLDKDLGKSVLEKAIEVVTEKIIESGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPED 1009
            R+Y  E+  +K L+CRFYE +YPE+E++VMVNVRNIA+MGAYV LLEYN+IEGMILLSELSRRRIRSINKLIRV RNEV MVLRVD+EKGYIDLSKRRVSPED+  CEDR+NKAKAVH VLRH+A+ R L LEDL  ++ WPLYKKYGHA+DAFKL L DE      ED F  + + ++ K  +  +I+RRLAPQP K+R+DIEV+C+TYEGIDA++ AL AG   G E TPI++KLIAPP YV+ TMTL+KD G ++L ++I+V+ E+I   GGK++VKMAPKAVS +EE+ELQAM++RLALENEE+DGDAP++
Sbjct:   26 RIYMGED--KKNLDCRFYEQKYPEVEQIVMVNVRNIADMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRVGRNEVVMVLRVDREKGYIDLSKRRVSPEDITACEDRFNKAKAVHGVLRHLAERRKLYLEDLYERIGWPLYKKYGHAYDAFKLALADEAAPGTVEDPFADVAVPDDLKDELKAYIRRRLAPQPIKIRSDIEVSCFTYEGIDAIREALFAGIDCGTENTPIKVKLIAPPIYVLSTMTLEKDAGIALLNRSIDVIRERITAKGGKMDVKMAPKAVSLKEETELQAMMDRLALENEEVDGDAPDE 338
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BLAST of mRNA_Ecto-sp6_S_contig100.747.1 vs. uniprot
Match: A0A448YZU6_9STRA (S1 motif domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZU6_9STRA)

HSP 1 Score: 413 bits (1061), Expect = 2.570e-137
Identity = 215/315 (68.25%), Postives = 259/315 (82.22%), Query Frame = 2 
Query:   74 DAARVYAEEEAKRKRLECRFYEAQYPEIEEVVMVNVRNIAEMGAYVVLLEYNDIEGMILLSELSRRRIRSINKLIRVNRNEVAMVLRVDKEKGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSTKVSWPLYKKYGHAFDAFKLTLQDEEDV---FVGLDIDEETKQAMITHIKRRLAPQPSKVRADIEVTCYTYEGIDAVKAALIAGKAVGDERTPIQIKLIAPPRYVMDTMTLDKDLGKSVLEKAIEVVTEKIIESGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPED 1009
            D  R+Y  +E  RK L CRFYE +YPEIE VVMVNVRNIA+MGAYV LLEY++IEGMILLSELSRRRIRSI+KLIRVNRNEV MVLRVDKEKGYIDLSKRRVSPEDV  CE+R+NKAK VH VLRH+A+ R   LEDL  K+ WPLYKKYGHA+DAFKL + +E+D    F  LD+ ++ K  + ++I RRLAPQP K+R+DIEV+C+TYEGIDA++ AL AG  +G E+ PI+IKLIAPP YV+ T TL+K++G  +L +AIEV+ EKI   GGK++VKMAPKAVS +EESELQ M++RLALENEE+DGDAPED
Sbjct:   20 DGFRIYLGDE--RKNLLCRFYENKYPEIESVVMVNVRNIADMGAYVSLLEYDNIEGMILLSELSRRRIRSIHKLIRVNRNEVVMVLRVDKEKGYIDLSKRRVSPEDVQACEERFNKAKTVHGVLRHLAERRKYFLEDLYEKIGWPLYKKYGHAYDAFKLAISEEKDAGDPFAELDVPQDLKDELKSYILRRLAPQPIKIRSDIEVSCFTYEGIDAIREALFAGMTLGTEQNPIKIKLIAPPIYVLSTTTLEKEVGIGLLNQAIEVIKEKITAKGGKIDVKMAPKAVSVKEESELQEMMDRLALENEEVDGDAPED 332
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BLAST of mRNA_Ecto-sp6_S_contig100.747.1 vs. uniprot
Match: A0A1E7FR39_9STRA (Eukaryotic translation initiation factor 2 subunit alpha n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FR39_9STRA)

HSP 1 Score: 412 bits (1058), Expect = 9.280e-137
Identity = 213/315 (67.62%), Postives = 256/315 (81.27%), Query Frame = 2 
Query:   74 DAARVYAEEEAKRKRLECRFYEAQYPEIEEVVMVNVRNIAEMGAYVVLLEYNDIEGMILLSELSRRRIRSINKLIRVNRNEVAMVLRVDKEKGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSTKVSWPLYKKYGHAFDAFKLTLQDEE---DVFVGLDIDEETKQAMITHIKRRLAPQPSKVRADIEVTCYTYEGIDAVKAALIAGKAVGDERTPIQIKLIAPPRYVMDTMTLDKDLGKSVLEKAIEVVTEKIIESGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPED 1009
            D  R+Y  E+  R+ L CRFYE +YPEIE VVMVNVRNIA+MGAYV LLEY+ IEGMILLSELSRRRIRSI+KLIRVNRNEV MVLRVDKEKGYIDLSKRRVSPEDV  CE+RYNKAKAVH V+RH+A  R   LED+  K+ WPLYKKYGHAFDAFKL++ +E+   D F  LDI +  K  + T+I RRLAPQP K+R+DIEV+C+TYEGIDA++AAL AG  +G E+ P++I+LIAPP YV+ T TL+K++G  +L + IEV+ EKI   GGK++VKMAPKAVS +EE+ELQ M+ER ALENEE+DGDA ED
Sbjct:   25 DGFRIYVGEDGGRQNLHCRFYENKYPEIESVVMVNVRNIADMGAYVSLLEYDGIEGMILLSELSRRRIRSIHKLIRVNRNEVVMVLRVDKEKGYIDLSKRRVSPEDVQACEERYNKAKAVHGVMRHLATQRKYYLEDVYEKIGWPLYKKYGHAFDAFKLSISEEKGVGDPFEDLDIPQGLKDELKTYILRRLAPQPIKIRSDIEVSCFTYEGIDAIRAALFAGMDLGSEQNPVKIRLIAPPLYVLSTTTLEKEVGVGLLNQVIEVIKEKITSKGGKIDVKMAPKAVSVKEETELQEMMERFALENEEVDGDAQED 339
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BLAST of mRNA_Ecto-sp6_S_contig100.747.1 vs. uniprot
Match: A0A7S2XWK8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWK8_9STRA)

HSP 1 Score: 411 bits (1056), Expect = 1.410e-136
Identity = 212/294 (72.11%), Postives = 251/294 (85.37%), Query Frame = 2 
Query:  116 RLECRFYEAQYPEIEEVVMVNVRNIAEMGAYVVLLEYNDIEGMILLSELSRRRIRSINKLIRVNRNEVAMVLRVDKEKGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSTKVSWPLYKKYGHAFDAFKLTLQDEEDVFVGLDIDEETKQAMITHIKRRLAPQPSKVRADIEVTCYTYEGIDAVKAALIAGKAVGDERTPIQIKLIAPPRYVMDTMTLDKDLGKSVLEKAIEVVTEKIIESGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGD 997
            RL CRFYE QYPEIE++V+VNV++IAEMGAYV LLEYN+IEGMILLSELSRRRIRSINKLIRVNRNEV MVLRVDKEKGYIDLSKRRVSPEDV KCEDRYNKAKAVHSVLRHVA+ + LVLEDL  +V WPLY  Y H +DAFK+ L  ++DVF GLD+ +E K  ++T+I+R+LAPQP K+RADIEVTC+TYEGI+AV++AL AG+A+G  + PI+I+LIAPP YVM  MTL+KD G  +L ++I  V E +   GG +EVKMAPKAVSQREESELQAM+ERLA+EN E+DGD
Sbjct:   37 RLSCRFYEQQYPEIEDLVVVNVKHIAEMGAYVTLLEYNNIEGMILLSELSRRRIRSINKLIRVNRNEVVMVLRVDKEKGYIDLSKRRVSPEDVVKCEDRYNKAKAVHSVLRHVAEKKALVLEDLYRRVGWPLYTSYKHCYDAFKVALV-QDDVFNGLDVPDEIKTELLTYIRRKLAPQPIKIRADIEVTCFTYEGIEAVRSALQAGQALGSAQEPIKIRLIAPPMYVMTCMTLEKDSGIELLNQSINAVREALESKGGTMEVKMAPKAVSQREESELQAMMERLAVENAELDGD 329
[Close]
BLAST of mRNA_Ecto-sp6_S_contig100.747.1 vs. uniprot
Match: B8C817_THAPS (Eukaryotic translation initiation factor 2 alpha subunit n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8C817_THAPS)

HSP 1 Score: 406 bits (1043), Expect = 1.580e-134
Identity = 210/320 (65.62%), Postives = 261/320 (81.56%), Query Frame = 2 
Query:   77 AARVYAEEEAKRKRLECRFYEAQYPEIEEVVMVNVRNIAEMGAYVVLLEYNDIEGMILLSELSRRRIRSINKLIRVNRNEVAMVLRVDKEKGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSTKVSWPLYKKYGHAFDAFKLTLQDE---------EDVFVGLDIDEETKQAMITHIKRRLAPQPSKVRADIEVTCYTYEGIDAVKAALIAGKAVGDERTPIQIKLIAPPRYVMDTMTLDKDLGKSVLEKAIEVVTEKIIESGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPED 1009
            A RVY  E+  +  L+CRFYEA+YPEIE +VMVNVR IA+MGAYV LLEYN+IEG+ILLSELSRRRIRSINKLIRV RNEVAMVLRVDK+KGYIDLSKRRVSPEDVA CED++NKAKAVH VLRH+AD R   LEDL  +++WPLY+KYGHA+DAFK+ L DE          D F  LD+  +  + +  +I+RRLAPQP K+RAD+EV+C+TY+GIDA++ AL AG AVG E +PI+I+LIAPP YV+ TMTL+K+ G ++L+K+I+V+ EKI   GGK++VKMAPKAVS +EE+ELQAM+ERL LEN E++GD PE+
Sbjct:   20 AFRVYLAED--KHNLDCRFYEAKYPEIESLVMVNVRTIADMGAYVSLLEYNNIEGLILLSELSRRRIRSINKLIRVGRNEVAMVLRVDKDKGYIDLSKRRVSPEDVAACEDKFNKAKAVHGVLRHLADRRKFYLEDLCERIAWPLYRKYGHAYDAFKIALADEAASGGEAAENDPFTSLDVPPDVIEELKLYIRRRLAPQPIKIRADVEVSCFTYDGIDAIRDALFAGIAVGTENSPIKIRLIAPPIYVLSTMTLEKEAGIALLQKSIDVILEKISAKGGKMDVKMAPKAVSLKEETELQAMMERLELENREVEGDEPEE 337
[Close]
BLAST of mRNA_Ecto-sp6_S_contig100.747.1 vs. uniprot
Match: A0A7S1YZT0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZT0_TRICV)

HSP 1 Score: 405 bits (1040), Expect = 4.460e-134
Identity = 208/304 (68.42%), Postives = 253/304 (83.22%), Query Frame = 2 
Query:  119 LECRFYEAQYPEIEEVVMVNVRNIAEMGAYVVLLEYNDIEGMILLSELSRRRIRSINKLIRVNRNEVAMVLRVDKEKGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSTKVSWPLYKKYGHAFDAFKLTLQDE------EDVFVGL-DIDEETKQAMITHIKRRLAPQPSKVRADIEVTCYTYEGIDAVKAALIAGKAVGDERTPIQIKLIAPPRYVMDTMTLDKDLGKSVLEKAIEVVTEKIIESGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPED 1009
            LECRFYEA+YPEIE++VMVNVRNIA+MGAYV LLEYN+IEGMILLSELSRRRIRSINKLIRV RNEV MVLRVD+EKGYIDLSKRRVSPED+  CEDR+NKAKAVH VLRH+A+ R L LEDL  ++ WPLY+KYGHA+DAFKL L DE      ED FV L D+ E+ K  +  +I+RRLAPQP K+R+D+EV+C+TYEGIDA++ AL AG A G E  PI++KLIAPP YV+ TMTL+KD G ++L +AIE +  +I + GGK++VKMAPKAVS +EE+ELQAM++RLA EN E++GD PE+
Sbjct:   35 LECRFYEARYPEIEQIVMVNVRNIADMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRVGRNEVVMVLRVDREKGYIDLSKRRVSPEDITACEDRFNKAKAVHGVLRHLAERRKLHLEDLYERIGWPLYRKYGHAYDAFKLALADEAAPGTVEDPFVDLADVPEDIKDELKKYIRRRLAPQPIKIRSDVEVSCFTYEGIDAIREALFAGMACGTENAPIKVKLIAPPIYVLSTMTLEKDAGIALLNRAIETIGAEIGKKGGKMDVKMAPKAVSLKEETELQAMMDRLAQENMEVEGDEPEE 338
[Close]
BLAST of mRNA_Ecto-sp6_S_contig100.747.1 vs. uniprot
Match: A0A7S2BW88_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BW88_9STRA)

HSP 1 Score: 405 bits (1040), Expect = 5.310e-134
Identity = 218/322 (67.70%), Postives = 259/322 (80.43%), Query Frame = 2 
Query:   59 AEMALDAARVYAEEEAKRKR-----LECRFYEAQYPEIEEVVMVNVRNIAEMGAYVVLLEYNDIEGMILLSELSRRRIRSINKLIRVNRNEVAMVLRVDKEKGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSTKVSWPLYKKYGHAFDAFKLTLQDEEDVFVGL-DIDEETKQAMITHIKRRLAPQPSKVRADIEVTCYTYEGIDAVKAALIAGKAVGDERTPIQIKLIAPPRYVMDTMTLDKDLGKSVLEKAIEVVTEKIIESGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPE 1006
            AE   D  R  AE+E +  R     L+CRFYE QYP IEEVV+VNVR IAEMGAYV LLEY++IEGMILLSELSRRRIRS+NKLIRVNRNEV MVLRVD+EKGYIDLSKRRV PE + +CE++YNK+KAV+ VLR VA+ +GL+L++L   V WPLYKKYGHA+DAFKL L D+ED+F  L D+D ET   +  +IK+RLAPQP K+RADIEVTC+TYEGIDAVK +L+AG A+G + +PI+IKLIAPP YV+ T TLDKDLG   L KAIEVVT KI E GGK++VKMAPKAVSQREE+EL  ++E+LA E EE DGD  E
Sbjct:   16 AEDTTDLERERAEDEERYLRDPASKLQCRFYENQYPGIEEVVIVNVRTIAEMGAYVTLLEYDNIEGMILLSELSRRRIRSVNKLIRVNRNEVVMVLRVDREKGYIDLSKRRVDPEQITQCEEKYNKSKAVYRVLRQVAEKQGLILKELYRSVGWPLYKKYGHAYDAFKLCLTDQEDIFKDLPDLDPETVTVLTDYIKKRLAPQPVKIRADIEVTCFTYEGIDAVKESLLAGVALGTKDSPIKIKLIAPPMYVVTTSTLDKDLGIDALNKAIEVVTAKITEKGGKIDVKMAPKAVSQREEAELAKLMEQLAAEAEEEDGDXXE 337
[Close]
BLAST of mRNA_Ecto-sp6_S_contig100.747.1 vs. uniprot
Match: B7FV44_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FV44_PHATC)

HSP 1 Score: 402 bits (1033), Expect = 2.700e-133
Identity = 209/300 (69.67%), Postives = 249/300 (83.00%), Query Frame = 2 
Query:  119 LECRFYEAQYPEIEEVVMVNVRNIAEMGAYVVLLEYNDIEGMILLSELSRRRIRSINKLIRVNRNEVAMVLRVDKEKGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRGLVLEDLSTKVSWPLYKKYGHAFDAFKLTLQDEEDV---FVGLDIDEETKQAMITHIKRRLAPQPSKVRADIEVTCYTYEGIDAVKAALIAGKAVGDERTPIQIKLIAPPRYVMDTMTLDKDLGKSVLEKAIEVVTEKIIESGGKLEVKMAPKAVSQREESELQAMLERLALENEEIDGDAPED 1009
            LECRFYE++YPEIE VVMVNVRNIA+MGAYV L+EY +IEGMILLSELSRRRIRSI+KLIRVNRNEV MVLRVDKEKGYIDLSKRRVSPEDVA CE+R+NKAKAVH VLRH+AD R   LEDL  K+ WPL +KYGHAFDAFKL + DE+ V   F  LDI ++ K  + T+I RRLAPQP K+R+DIEV+C++YEGIDA++ AL AG A G E + I+IKLIAPP YV+ T TLDKD G ++L  AI+ + + I   GGK++VKM PKAVS +EE+ELQAM++RLALENEE+DGDAPE+
Sbjct:   20 LECRFYESKYPEIESVVMVNVRNIADMGAYVSLMEYGNIEGMILLSELSRRRIRSIHKLIRVNRNEVVMVLRVDKEKGYIDLSKRRVSPEDVAACEERFNKAKAVHGVLRHIADRRKYYLEDLYEKIGWPLDRKYGHAFDAFKLAISDEKGVVNPFDELDIPQDLKDELTTYILRRLAPQPIKIRSDIEVSCFSYEGIDAIREALFAGMAKGTENSVIKIKLIAPPIYVLSTTTLDKDAGIALLHSAIDAIRDVIALKGGKMDVKMPPKAVSIKEENELQAMMDRLALENEEVDGDAPEE 319
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5M3_9PHAE4.070e-219100.00S1 motif domain-containing protein n=1 Tax=Ectocar... [more]
A0A835YGW1_9STRA1.130e-15676.43Eukaryotic translation initiation factor 2 alpha s... [more]
A0A6U2GSC0_9STRA2.240e-13766.67Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A448YZU6_9STRA2.570e-13768.25S1 motif domain-containing protein n=1 Tax=Pseudo-... [more]
A0A1E7FR39_9STRA9.280e-13767.62Eukaryotic translation initiation factor 2 subunit... [more]
A0A7S2XWK8_9STRA1.410e-13672.11Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
B8C817_THAPS1.580e-13465.63Eukaryotic translation initiation factor 2 alpha s... [more]
A0A7S1YZT0_TRICV4.460e-13468.42Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2BW88_9STRA5.310e-13467.70Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
B7FV44_PHATC2.700e-13369.67Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:466719..470551 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score409.1
Seed ortholog evalue2e-111
Seed eggNOG ortholog35128.Thaps105
Preferred nameEIF2S1
Model size1893
KEGG koko:K03237
KEGG Pathwayko03013,ko04138,ko04140,ko04141,ko04210,ko04932,ko05160,ko05162,ko05164,ko05168,map03013,map04138,map04140,map04141,map04210,map04932,map05160,map05162,map05164,map05168
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000077,GO:0000166,GO:0000278,GO:0001882,GO:0001883,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0005850,GO:0005851,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006464,GO:0006468,GO:0006518,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006950,GO:0006974,GO:0006979,GO:0006984,GO:0006986,GO:0006996,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007346,GO:0007568,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009267,GO:0009314,GO:0009408,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010042,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010608,GO:0010629,GO:0010941,GO:0010942,GO:0010948,GO:0016043,GO:0016310,GO:0017076,GO:0017148,GO:0019001,GO:0019222,GO:0019538,GO:0022402,GO:0022607,GO:0022613,GO:0022618,GO:0023052,GO:0030968,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031570,GO:0031571,GO:0031667,GO:0031668,GO:0031669,GO:0032055,GO:0032057,GO:0032091,GO:0032268,GO:0032269,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033290,GO:0033554,GO:0034063,GO:0034198,GO:0034248,GO:0034249,GO:0034599,GO:0034605,GO:0034620,GO:0034622,GO:0034641,GO:0034644,GO:0034645,GO:0034976,GO:0035639,GO:0035770,GO:0035966,GO:0035967,GO:0036094,GO:0036211,GO:0036464,GO:0036499,GO:0042221,GO:0042594,GO:0042981,GO:0042995,GO:0043021,GO:0043022,GO:0043043,GO:0043065,GO:0043067,GO:0043068,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043393,GO:0043412,GO:0043555,GO:0043558,GO:0043603,GO:0043604,GO:0043614,GO:0043933,GO:0044085,GO:0044092,GO:0044093,GO:0044207,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0044877,GO:0045786,GO:0045930,GO:0045947,GO:0046777,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051098,GO:0051099,GO:0051100,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051716,GO:0051726,GO:0055085,GO:0060255,GO:0065003,GO:0065007,GO:0065009,GO:0070887,GO:0070925,GO:0070993,GO:0071214,GO:0071241,GO:0071248,GO:0071287,GO:0071310,GO:0071478,GO:0071482,GO:0071496,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0097386,GO:0097449,GO:0097450,GO:0097451,GO:0104004,GO:0120025,GO:1901214,GO:1901216,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902806,GO:1902807,GO:1903047,GO:1904035,GO:1904037,GO:1904424,GO:1905097,GO:1905098,GO:1990737,GO:1990904,GO:1990928,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2000674,GO:2000676
Exons4
EggNOG free text desc.Eukaryotic translation initiation factor 2 alpha subunit
EggNOG OGs2XB8H@2836,COG1093@1,KOG2916@2759
Ec32 ortholog descriptioneukaryotic initiation factor 2 alpha subunit
Ec32 orthologEc-12_002490.1
Cds size996
COG Functional cat.J
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03012
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.747.1prot_Ecto-sp6_S_contig100.747.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig100 467597..470532 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348725.6897762-UTR-Ecto-sp6_S_contig100:466718..4675961682348725.6897762-UTR-Ecto-sp6_S_contig100:466718..467596Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig100 466719..467596 -
1682348725.7405076-UTR-Ecto-sp6_S_contig100:470532..4705511682348725.7405076-UTR-Ecto-sp6_S_contig100:470532..470551Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig100 470533..470551 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348725.7024844-CDS-Ecto-sp6_S_contig100:467596..4677131682348725.7024844-CDS-Ecto-sp6_S_contig100:467596..467713Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 467597..467713 -
1682348725.7127285-CDS-Ecto-sp6_S_contig100:468551..4687911682348725.7127285-CDS-Ecto-sp6_S_contig100:468551..468791Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 468552..468791 -
1682348725.7213576-CDS-Ecto-sp6_S_contig100:468986..4692951682348725.7213576-CDS-Ecto-sp6_S_contig100:468986..469295Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 468987..469295 -
1682348725.7309809-CDS-Ecto-sp6_S_contig100:470202..4705321682348725.7309809-CDS-Ecto-sp6_S_contig100:470202..470532Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 470203..470532 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig100.747.1

>prot_Ecto-sp6_S_contig100.747.1 ID=prot_Ecto-sp6_S_contig100.747.1|Name=mRNA_Ecto-sp6_S_contig100.747.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=332bp
MAAQVVVPPVQGKAEMALDAARVYAEEEAKRKRLECRFYEAQYPEIEEVV
MVNVRNIAEMGAYVVLLEYNDIEGMILLSELSRRRIRSINKLIRVNRNEV
AMVLRVDKEKGYIDLSKRRVSPEDVAKCEDRYNKAKAVHSVLRHVADLRG
LVLEDLSTKVSWPLYKKYGHAFDAFKLTLQDEEDVFVGLDIDEETKQAMI
THIKRRLAPQPSKVRADIEVTCYTYEGIDAVKAALIAGKAVGDERTPIQI
KLIAPPRYVMDTMTLDKDLGKSVLEKAIEVVTEKIIESGGKLEVKMAPKA
VSQREESELQAMLERLALENEEIDGDAPEDV*
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mRNA from alignment at Ecto-sp6_S_contig100:466719..470551-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.747.1 ID=mRNA_Ecto-sp6_S_contig100.747.1|Name=mRNA_Ecto-sp6_S_contig100.747.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3833bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:466719..470551- (Ectocarpus species6 EcLAC_371)
CAGCAGCAGCAGCAACCCGATGGCGGCACAAGTGGTAGTACCGCCCGTGC
AGGGCAAGGCAGAGATGGCTCTGGACGCGGCCCGCGTGTACGCGGAGGAG
GAGGCCAAGCGGAAGAGGCTGGAGTGCCGCTTCTACGAGGCGCAGTACCC
CGAGATCGAGGAGGTGGTGATGGTCAATGTGCGCAACATCGCGGAGATGG
GGGCGTACGTGGTGTTGCTCGAGTACAACGACATCGAGGGGATGATTCTC
CTGTCGGAGCTGTCTCGCCGGCGTATCCGGTCGATCAACAAGCTCATCCG
GGTTAACCGAAACGAGGTGGCCATGGTGCTGCGTGTCGACAAAGAGAAGG
TACATACTGCTGGTACCAAATTACTACAACAGTAGTTACGGGGCGTTTTG
ATTTGAACCAACATGAACGACAGAGGAACGACATTACCTATTGAGCTTAA
CTACAGGCAGCTTCAGCGCATCGGTAGTCTTTGCCTATGCCTAGAGGGGC
AAACAGTGAACAAGGGCATGGGAGATCCCGCTGGTGCTGGTCCGCGTTGG
TTCTTCTTGCCCTACGCTGGCTTCCCACACAACGTTATATTCGCAGGCAT
GTGTACCTACAGGAGAGCAGGCTCACCGAAGTCATCCCCATCTACTACTG
ATGAGTCTACCGATCACCTTCAACATGTCACTCTTTAGAACGACTACGAC
TTCATCATCACCCACTGGCGTTTGCGCTGGCGGCTGTAAGGATTTCTCTA
GCAGCGATTTGTGAGCACGGGCACACGAAACGGAAAGGATGTGACATACA
GAGTCCACTGCAGCAGGCTCGGCTCGTCTCATTAGTATTGTGTTACACCA
TCCTCGGTATTGAGTAGGACGAGGCGTCCAATAGAAACTACGCCAGAGTA
TAATGCATGTGGCAAACAAAAGCCGGTACCAGTATATGGGAGCTGGGGCA
GACTCGGGAATCACAAGTTCACATATATGGCACGGAGGCTCGTGGAATCA
CCCGCCACACGCACTTCGGTGGCGGCGTAGTCTGTTGTATGTCTGAACAT
TCGCCTCAAGTCCATTGATTCCAGGAAACCTGAAATCACGAAGGCAGACA
AATGCCCGAAGAGAAGCAGTCTACCACCTCTTTGACCCCGCCGTACCACC
CTCGCCTTGACTACTCTTTGAAGAGTGCTCTGCCGCTGCATCTTTCATGG
GGTGTGGTTGCAACTGAATGCGTTCTCTCGCTTTGTGGTCATTTCGCGAC
GCTCAGGGTTACATCGACTTGTCGAAGCGGAGGGTGAGCCCGGAGGACGT
GGCGAAGTGCGAGGACCGATACAACAAGGCGAAGGCGGTGCACAGCGTGC
TGCGCCACGTCGCCGACCTGAGGGGCCTCGTGCTCGAGGACCTCAGCACG
AAGGTCTCCTGGCCGCTGTACAAGAAGTACGGGCACGCCTTCGACGCGTT
CAAGCTCACGCTGCAGGACGAAGAGGACGTGTTCGTGGGGCTGGACATCG
ACGAGGAGACCAAGCAGGCGATGATCACGCACATCAAGCGCCGGTTGGCA
CCGCAGCCGAGCAAGGTGGGTTTTACGTTTTTCGCCACTTGTTTGTCGAG
TCTGCGCAGCGTTCGACTTTGCGGCACGCGCTGCCGTTGTTCCGTCCAAG
CGGTATATGGTGGCTGAGCATTTGGTGCTGCTGTATAGATGGCACATCAG
ACGAAATTATCTTAAGGTTGGTTGTGTGTCACCATCACCGTCATACAATC
ACGAACACAGGTGCGCGCGGACATCGAGGTCACGTGCTACACGTACGAGG
GGATCGACGCCGTCAAGGCGGCGTTGATTGCAGGGAAGGCCGTGGGGGAC
GAGAGGACGCCCATCCAGATCAAGCTCATCGCTCCCCCGCGGTACGTGAT
GGACACCATGACGCTGGACAAGGACCTGGGGAAGTCGGTGTTGGAGAAGG
CGATCGAGGTGGTGACCGAAAAGATCATCGAGTCGGGGGGGAAGCTCGAG
GTGAGCGAGTGGCGGAGTCGGTTGTCGGGGATCGGTTTGTGTGTGTATGC
TGGTTGTTCTTCGTCGAATTTTTATATCTAGAGTGAGGCTGCTGCTGCCG
TATGCCAGTCTTGGACACTTGAGGAGGCATTTCTTCTCGGTCGAGATCCC
TCAAGTTTTCAGGGTTTGATGGTGCGTAAGAAGCAAATCGTTTCTTGAGT
CGTTATAGTGGAGAAGAAACCTACTCGCTCGTGTTTTTCATCGTGTGGAG
CCTCTTGTGCTTTTGGTGTTGGTCTTGTGTTTTGCGTTTCTCCCCGAGTG
TTGAGACTGCTCTGACATGCTTGCTCTTTATTTGTCAGTCTTGATCTCAC
ATGCGACCTTGGAAGGAAGTGCATGGGTGTTCCTTGAAAGGGAAAAAGAG
GTGTTGGATACAAGCCAACGACTTTGGTGTTTGAAGATAACAACAGCAAC
CGATCTTTGACAACCGGTCAAGTCGTGTTTTCAGCACGTATCTAACAGCC
CGCTGCCTCGAAGGACCAAGGTGCCTCCTAGAGCGCATTCAGCAGCGTTG
TGCAGCCTCTCGTTTACACCCGTGAGCTCTGGCAGTAACAAACGTTTTAT
GTTCATCACATGCGTCCTTGAGGTGGCGTGGAGAAAAGCTTCGCCGGTGT
GCACAATTTCCAGCCAAGCGCAGCTGACGTGGCGATGAGCGACCTCTCGT
CTCTTGCCATACTAATGGAAACGCGCCTACGCATCGAAGAGCGTTGTTGT
CATGCTGGCCAAAAGTGACTACACATCTCACTTCCCCCCTCTGCTTGGTT
TCGTCCGGTACCCCTACACGTGACATGACACGTGGCAGGTTAAGATGGCG
CCAAAGGCGGTGAGCCAAAGGGAAGAGTCCGAGTTGCAGGCCATGCTGGA
GCGCTTGGCACTCGAGAACGAAGAAATAGATGGGGACGCCCCCGAAGATG
TTTGATTTCGTCACTCACGCCTTGTATTTCTTGTTGCGCTGATTCAGGGG
GGGGGGGCAGTTTTCTTTCCCCCTGCTTTCAATGCAGTTTCTTTTGTGCT
CCTGTTGTTGGCGGGCTGGTCACGTCAGCGAAGCCGAGTGTCCTGGAAGC
TTTTGGCGTACTTTGGCACGTTTCGTTTCAGTGATTTTATTTTGGCCAGT
GGGCAGCTGGTGTGGTAGCGGCTACGCACATGCAAGTTTGGTGCCACCTA
CGCGACGTTTCAGGCCGCATCGTTAACCATCTCTTTGTGCTGTAGAAGGA
GTTTGACTGGCTAAGACTTGGCAGCGTTATTAGTGCGATTAGGAGTCAGG
GCTATGTAGCAGGCCTATCGGATGTGATTTGGTGTGGGCAAACGCGCCCA
ACAGCACAGCATTGTCCGACTAATAGGGGTGCCACATGACTATGCCACAA
ATGGCACGTGTAGTCAGGCATAATCTGTTGGCTGCACGCCGCGCGTTGGA
CGTACGTGTTTGTGTGTTGTTTTAAGTGGCAGGACATTTCGTATGCCCGA
TGTTTGTTGTGCGGGAGGAATGTAGTGACTTGGCAAGCACTGAACAAGAA
ACAATTTGCAGGTGATGTCTCTCATGGCTCTCTTCTGTTGTAGGCAGGTT
AGTTCGGCCTCAGCCTACCCTCGGCTTCTGAGTCGTGCGGGCGTTCAAAC
GTGTCTACCCATCGTAGGCGCTGGCGCGTCTTAAACGAAATCTAAGCGCT
CCCAACTTTGCGTGCAGCGCATGATTTAGCTCAGCAGACGACCACCGCAC
GCGTTTGTCTTTGGTTCGCAGCGATCCTTGTAGCCAACAGGCGCCAGCTC
CGAGTTTTTTAGTTGGGCAATCACTCACTCCCT
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:466719..470551-

>mRNA_Ecto-sp6_S_contig100.747.1 ID=mRNA_Ecto-sp6_S_contig100.747.1|Name=mRNA_Ecto-sp6_S_contig100.747.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=996bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:466719..470551- (Ectocarpus species6 EcLAC_371)
ATGGCGGCACAAGTGGTAGTACCGCCCGTGCAGGGCAAGGCAGAGATGGC
TCTGGACGCGGCCCGCGTGTACGCGGAGGAGGAGGCCAAGCGGAAGAGGC
TGGAGTGCCGCTTCTACGAGGCGCAGTACCCCGAGATCGAGGAGGTGGTG
ATGGTCAATGTGCGCAACATCGCGGAGATGGGGGCGTACGTGGTGTTGCT
CGAGTACAACGACATCGAGGGGATGATTCTCCTGTCGGAGCTGTCTCGCC
GGCGTATCCGGTCGATCAACAAGCTCATCCGGGTTAACCGAAACGAGGTG
GCCATGGTGCTGCGTGTCGACAAAGAGAAGGGTTACATCGACTTGTCGAA
GCGGAGGGTGAGCCCGGAGGACGTGGCGAAGTGCGAGGACCGATACAACA
AGGCGAAGGCGGTGCACAGCGTGCTGCGCCACGTCGCCGACCTGAGGGGC
CTCGTGCTCGAGGACCTCAGCACGAAGGTCTCCTGGCCGCTGTACAAGAA
GTACGGGCACGCCTTCGACGCGTTCAAGCTCACGCTGCAGGACGAAGAGG
ACGTGTTCGTGGGGCTGGACATCGACGAGGAGACCAAGCAGGCGATGATC
ACGCACATCAAGCGCCGGTTGGCACCGCAGCCGAGCAAGGTGCGCGCGGA
CATCGAGGTCACGTGCTACACGTACGAGGGGATCGACGCCGTCAAGGCGG
CGTTGATTGCAGGGAAGGCCGTGGGGGACGAGAGGACGCCCATCCAGATC
AAGCTCATCGCTCCCCCGCGGTACGTGATGGACACCATGACGCTGGACAA
GGACCTGGGGAAGTCGGTGTTGGAGAAGGCGATCGAGGTGGTGACCGAAA
AGATCATCGAGTCGGGGGGGAAGCTCGAGGTTAAGATGGCGCCAAAGGCG
GTGAGCCAAAGGGAAGAGTCCGAGTTGCAGGCCATGCTGGAGCGCTTGGC
ACTCGAGAACGAAGAAATAGATGGGGACGCCCCCGAAGATGTTTGA
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