mRNA_Ecto-sp6_S_contig100.741.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig100.741.1
Unique NamemRNA_Ecto-sp6_S_contig100.741.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: A0A6H5KVC1_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVC1_9PHAE)

HSP 1 Score: 664 bits (1714), Expect = 1.400e-236
Identity = 343/356 (96.35%), Postives = 348/356 (97.75%), Query Frame = 1
Query:   31 MFRSGFARCRPRQVSATGGLRLSCRQPQGAWTGSSGSTAVRVFSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSAVPGATVTAAKPRTFDHPTWAVKQLSSATKLEEIPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHPDQRASVSKTPGETRTLDFFQIGKGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQTNLSIMTLSALKGAGMVELQKELASLDPKPVAAAAAAVPRDGESEGGDDQ 1098
            MF SGF RCRPRQVSA GGLRLSCRQP GAW G SGSTAVRVFSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSAVPGATVTAAKPRTFDHPTWAVKQLS  +KLEEIPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHP+QRASVS+TPGETRTLDFFQIGKGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQTNLS+MTLSALKGAGMVELQKELASLDPKPVAAAAAAVPRDGESEGGDD+
Sbjct:    1 MFTSGFGRCRPRQVSAPGGLRLSCRQPLGAWMGRSGSTAVRVFSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSAVPGATVTAAKPRTFDHPTWAVKQLSPVSKLEEIPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHPNQRASVSETPGETRTLDFFQIGKGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQTNLSVMTLSALKGAGMVELQKELASLDPKPVAAAAAAVPRDGESEGGDDR 356          
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: A0A835ZG72_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG72_9STRA)

HSP 1 Score: 275 bits (702), Expect = 1.920e-81
Identity = 162/344 (47.09%), Postives = 225/344 (65.41%), Query Frame = 1
Query:  160 STEPAGPE--ISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSAVPGATVTAAKPRTFDHPTWAVKQLSSATKLEEIPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHPDQRASVSKTPGETRTLDFFQIGKGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDPKGP-----SPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQTNLSIMTLSALKGAGMVELQKELASLDPKPVAAAAAAVPRDGESEGGDDQ*LYIADDISIGALSAE-GGIDGGR 1167
            S +P+G    IS R  F+ + +D KV+ +LD+  LG E  K    RK  L  +G     +   T  +A  +TFD PTWAVK+++SA  +EEIPP +  LPEVA VGRSNVGKSTLLNAL+GLK HP  RA+ S  PGETR++DFF++GKG +A++++ D PG+GFA+A EE+ + +   ++ YLRGRGA LKRV +LLDARHGFK  D+ FL  LY  KG      +PLG Y+PPK+Q++LTKCDLV+R +LARRV  VR +L +V+ R+T L ++ +SAL+   + +LQKELA L P+    A  +  R   ++  + +    + +   G   A  GG +GGR
Sbjct:   67 SDDPSGEPATISNRAAFRALPIDNKVLAYLDSRDLGRELPKRASKRKRVLIEKGLHD--LHSVTPESAALKTFDVPTWAVKKVASAQSVEEIPPPS-ELPEVAFVGRSNVGKSTLLNALLGLKGHPLVRAATSMRPGETRSIDFFRLGKGSKAQLLLVDTPGFGFAFAKEEESERFIATLLQYLRGRGALLKRVCMLLDARHGFKANDVAFLQRLYARKGQDGLGRNPLGPYKPPKLQVILTKCDLVQRRELARRVSQVRARLSDVTPRETYLPVLMVSALRDQAVEDLQKELAGLVPQ----ARRSEDRSDTAQSSEKEQSSESREGEGGGYGASAGGREGGR 403          
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: A0A7S2GV24_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GV24_9STRA)

HSP 1 Score: 171 bits (434), Expect = 5.600e-46
Identity = 94/197 (47.72%), Postives = 130/197 (65.99%), Query Frame = 1
Query:  454 EVALVGRSNVGKSTLLNALVGLKKHPDQRASVSKTPGETRTLDFFQIGKGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDPKG--PSPLGKY---RPPKIQILLTKCDLVKRIDLARRVVFVRQQL-EEVSRRQTNLSIMTLSALKGAGMVELQKELASL 1026
            E+ALVGRSNVGKS+LLN ++ +   P  +A     PG T+ L F+      R  + + D+PGY FAY ++E+ + W  LM+ YLR RG  LKRV LLLDARHG K  D +FL LLY+P+     P G++    PPK+Q++LTKCDLV R DL RR+  VR+++ +E+  R   L  + +SA +G G++ELQ+ELASL
Sbjct:   40 EIALVGRSNVGKSSLLNTVLNISASPKNKAPTGTRPGVTQKLHFYAAAT--RKPLTLVDVPGYSFAYEDQERIEAWNDLMLKYLRHRGPSLKRVCLLLDARHGLKVIDRQFLRLLYEPRPIVDPPPGEHVLWDPPKLQVILTKCDLVDRFDLVRRIQRVREEMSDELPSRAGRLQAIMVSAREGKGIMELQRELASL 234          
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: A0A7S1VXG1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VXG1_9STRA)

HSP 1 Score: 168 bits (425), Expect = 7.650e-42
Identity = 116/268 (43.28%), Postives = 152/268 (56.72%), Query Frame = 1
Query:  391 VKQLSSATKLEE-IPPAAASLPEVALVGRSNVGKSTLLNALV--------------------GLKKHPDQRASVSKTPGETRTLDFFQI------------GKGKRAKM--IIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDP------KGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEE-VSRRQTNLSIMTLSALKG------------AGMVELQKELASLDP 1032
            VK L S+  LEE +P ++  L EVAL GRSNVGKSTLLNAL+                      K     +A +S  PGETR +  +Q+            GK  + KM  ++AD+PGYGFA+A+EE+ ++W  LM  YL  RG  LKRV+LL+DARHG K AD EFL  L +       +G +P      P IQI+LTKCDLV + DLARRVV VRQQL + + R  ++L +M +SA  G             G++ELQ+ELA+L P
Sbjct:  252 VKLLGSSGSLEEELPKSSKGLSEVALAGRSNVGKSTLLNALLYGNQLGKPQERQYRRGKTPENAKLPKGVKAVMSDKPGETRRITLYQLSSEIIKPPKDEQGKKHKEKMSLLLADLPGYGFAFASEEKYKEWHDLMRHYLLDRGKSLKRVLLLIDARHGMKNADFEFLSSLQESLKSTSKEGATPKNVRELPPIQIVLTKCDLVTQDDLARRVVQVRQQLSDNLLREPSSLPVMLVSAKAGLGYNNIRGGIARGGVLELQRELAALVP 519          
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: B7FQ16_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ16_PHATC)

HSP 1 Score: 162 bits (411), Expect = 5.150e-41
Identity = 131/361 (36.29%), Postives = 184/361 (50.97%), Query Frame = 1
Query:  148 VRVFSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGM----EKKK-----IERGRKLRLYRRGAVSSAVPGATVTAAKPRTFDHP------TWAVKQLSSATKLEEIPPAA-ASLPEVALVGRSNVGKSTLLNALVGLKKHPD--------------------QRASVSKTPGETRTLDFFQIGKGKRAK--------MIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAP-LKRVMLLLDARHGFKKADIEFLGLLYDPK----------GPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQ-TNLSIMTLSALKGAG------------MVELQKELASL 1026
             R+FS+     ++S R+ FK++AV   +  ++  +G+G+     KKK     IE GR  R  R G   +  P AT    + R +  P       + VK + +   L++  PA   ++PE+ L GRSNVGKSTLLNAL+   KH D                     +A+ S  PGETR + F+Q+      +        + + D+PGYGFAYA EE  + ++ LM  YL  RG   LKRV+LL+DARHG KKAD++FL  L +            G        PP IQ++LTKCDLV R DLARRV  VR QL +   R+ + L +M +SA  G G            ++ELQKE+ +L
Sbjct:    8 TRIFSSSVIDAKVSNRRSFKELAVHPSIHNYIQLIGVGIPPRRSKKKSQRIAIEPGR-FRDRRGGRAMN--PEATEDQKRERHWKPPPPFGPKAFPVKVVGNVATLDDHYPANHKNIPEIVLAGRSNVGKSTLLNALLYGNKHADAVVRQRVRGKTPESVKQPKGMKATTSDKPGETRAITFYQLAARLERENGVFYDHALRLVDLPGYGFAYAKEEAARRYRALMADYLLKRGNKYLKRVLLLIDARHGMKKADVDFLMDLQEHSRHLQENSRLDGKRKKNAQLPP-IQLVLTKCDLVTRADLARRVAQVRSQLSDCFIREPSQLPVMLVSARAGVGYNNVVGDKARGGVLELQKEIVAL 364          
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: A0A812TAA1_SYMMI (EngB protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TAA1_SYMMI)

HSP 1 Score: 154 bits (389), Expect = 1.870e-39
Identity = 93/215 (43.26%), Postives = 131/215 (60.93%), Query Frame = 1
Query:  451 PEVALVGRSNVGKSTLLNALVGLKKHPDQRASVSKTPGETRTLDFFQIGKGKRAK---MIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFL------------GLLYDPKGPSPL--------GKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQTNLSIMTLSALKGAGMVELQKELASL 1026
            PEVA++GRSN GKSTL+N+L+G      +RA VS  PGET+ L F+ + K  ++K   + I DMPGYGF++ +E++ Q    L  +Y+R RG  LKRV+L++DARHG K+ D   L             +  DP     +              K+QI+LTKCDLV+R+DLARR+  VR Q+   +  + +L +M +SA KG G+VELQKEL+SL
Sbjct:   24 PEVAIIGRSNAGKSTLVNSLLGYDSSYTKRAPVSSKPGETQALQFYVLRKQYKSKQPALGIVDMPGYGFSFTSEKEAQRCFTLNSSYIRLRGKNLKRVLLVVDARHGLKRTDFRCLHDLMSNTFRDAGDITTDPSADFDVKFDHSKKSANDATWKLQIILTKCDLVERLDLARRIAAVRDQVR-ANFFEDDLPVMMVSAAKGLGIVELQKELSSL 237          
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: A0A7S1ZZ98_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ98_TRICV)

HSP 1 Score: 160 bits (404), Expect = 4.000e-39
Identity = 113/278 (40.65%), Postives = 154/278 (55.40%), Query Frame = 1
Query:  391 VKQLSSATKL-EEIPPAAASLPEVALVGRSNVGKSTLLNALV-----------------------GLKKHPDQRASVSKTPGETRTLDFFQIG--------KGKRAK-----MIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDP------KGPSPLGK------YRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQ-TNLSIMTLSALKGAG------------MVELQKELASLDPKP 1038
            VK L  A  L +++P +++ LPEVAL GRSNVGKSTLLNAL+                        +K    ++A VS  PGET+ +  +Q+         +G+R       +++AD+PGYGFAYA+E +   W  LM  YL  RG  LKR++LL+DARHGFK AD  FL  L +       KG     K      +  P IQI+LTKCDL K+ DLARRVV V++QL +  +RQ ++L +M +SA  G G            M++LQ+ELA+L P P
Sbjct:  218 VKVLGKAGSLNDDMPRSSSGLPEVALAGRSNVGKSTLLNALLYGNQPSRDGHSVERMYQRGKTPERMKLPRGEKAKVSDKPGETQDITLYQLSSDMVFLNKEGQRENKSKMSLVLADLPGYGFAYASENKATTWSELMKHYLLRRGESLKRILLLIDARHGFKNADYAFLETLQNALKEGQKKGAHVSSKQQCGLEFDLPPIQIVLTKCDLCKQDDLARRVVQVKEQLSKSLKRQPSSLPVMLVSAKTGVGYNNIRRGKARGGMLQLQRELAALVPFP 495          
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: A0A1Z5JKA0_FISSO (GTP-binding protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKA0_FISSO)

HSP 1 Score: 149 bits (375), Expect = 1.070e-36
Identity = 98/289 (33.91%), Postives = 156/289 (53.98%), Query Frame = 1
Query:  157 FSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSAVPGATVTAAKPRTFD---------HPTWAVKQLSSATKLEE---IPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHPDQ----------------------RASVSKTPGETRTLDFFQIGKGKRA--KMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDP---KGPSPLGKYRPPKIQILLTKCDLVKRIDLARRV 906
            F+T+ A  + S++QQF+   VD  +++++ ++G+G+  ++          R+   +   P     A  P ++           P   +  +S+   L+E    PP     PE+AL+GRSNVGKSTLLN L+   ++ ++                      +A  S  PGET+ + F+ +  G+ +  ++ + D+PGYGFAYA+EE ++    L+ ++L+ R   LKR++LL+DARHG KKADI+FL LL D    K  +   K   P IQ++LTKCDLV + DLARRV
Sbjct:   30 FTTDTAVGK-SQKQQFRDTPVDPSILKYITSVGVGIPPRR----------RKNRRNDNTPDEVSNANNPTSWKVPLPFGPNASPVRVIASVSAVNTLDENMGFPPVHKERPEIALIGRSNVGKSTLLNTLLYANRNENRQQEGGRAGRRSRIQTIELPRGIKAVTSNKPGETKHVTFYHLSSGEDSTCRLCLVDLPGYGFAYASEETKKTVDELIFSFLKQRQGHLKRILLLIDARHGMKKADIDFLTLLEDELVYKDSANNKKKTLPPIQVVLTKCDLVHQADLARRV 307          
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: K0SSQ4_THAOC (EngB-type G domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SSQ4_THAOC)

HSP 1 Score: 151 bits (381), Expect = 3.550e-36
Identity = 130/409 (31.78%), Postives = 183/409 (44.74%), Query Frame = 1
Query:  139 STAVRVFSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIER---GRKLRLYRRGAVSSAVPGATVTAAKPRTFDHPTWA-----------------------------------------------VKQLSSATKLEEIPPAAASLPEVALVGRSNVGKSTLLNALV--------------------GLKKHPDQRASVSKTPGETRTLDFFQIG-------------KGKRA------KMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYD-------PKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEE-VSRRQTNLSIMTLSALKG------------AGMVELQKELASLDPKP 1038
            S  ++  + E  G   S RQ F+   V   ++ H++ +G+G+  K+  R   G    +   G     V       AK R   H +W                                                VK L +A+ L +  P    L EVA+ GRSNVGKSTLLNAL+                    G K     +A+ S  PGET+ L F+Q+                KR        +++ D+PG+G+A A+    +DW  LM+ YL  R + LKR++LLLDARHGFKK D EFL  L D         G + + +  PP +QI+LTKCDLVK+ DLARRVV V++ L + + R  ++L +M +SA  G             G++ELQ+ELASL P P
Sbjct:   54 SGGIKELAQEVVGERQSNRQLFRSTPVIPSILAHIENIGVGIRPKRRRRRKAGSDTNIRNGGGTFDEVEELAYFKAKDRQH-HQSWREKRRDRTPATVSTGTFWMPPPPFSSYLRNSHNSEEAAFPGHKIVRRPVKILGTASSLNDKLPRPRGLNEVAIAGRSNVGKSTLLNALLYGNIDEHLSARKFRRGRVPEGAKIPRGNKAATSVKPGETKKLTFYQLSAEFTPLREDQSDISDKRMTDKADMSLLLVDLPGFGYADASTRATKDWNDLMIHYLLKRRS-LKRILLLLDARHGFKKTDFEFLTSLQDGLGTRIQESGGNKIRRELPP-LQIVLTKCDLVKQADLARRVVAVKRDLSDFLLREPSSLPVMLVSAKPGLGFNNVRGGKPLGGVLELQRELASLVPMP 459          
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Match: A0A1Y1WK35_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WK35_9FUNG)

HSP 1 Score: 145 bits (365), Expect = 2.430e-35
Identity = 113/291 (38.83%), Postives = 147/291 (50.52%), Query Frame = 1
Query:  145 AVRVFSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSAVPGATVTAAKPRTFDHPTWAVKQLSSATKLEEIPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHPDQRASVSKTPGETRTLDFFQIGKGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEVSRRQTNLSIMTLSALKGAGMVELQKEL 1017
            AVRV  +E    E+S RQ F ++  DAK +  LD L LG EK    RGR                          F+   W   Q +  T           LPE+  VGRSNVGKSTL+N L G        A VS+ PG T+ ++F+           + DMPGYGFAY  EEQ+Q W  L+  Y+R R   LKRVMLLLDARHG K  D EF+ LL D  G          K Q+++TKCDLV RIDLA+R + V Q+ ++   R     ++ +SA    G+ +L+KE+
Sbjct:   47 AVRVGKSE----ELSNRQLFSRLQPDAKTLDALDMLQLGTEK----RGR--------------------------FERRKWFPVQRARET-----------LPEIGFVGRSNVGKSTLVNTLCG-----SSAARVSERPGLTQQINFYTADND----FHLVDMPGYGFAYVKEEQKQAWVPLIEKYVRERKR-LKRVMLLLDARHGIKANDQEFMELL-DRTGT---------KYQVVMTKCDLVSRIDLAKRHLLVAQETQKS--RNCIPRVLMVSAKHERGLNDLRKEI 270          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVC1_9PHAE1.400e-23696.35EngB-type G domain-containing protein n=2 Tax=Ecto... [more]
A0A835ZG72_9STRA1.920e-8147.09P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2GV24_9STRA5.600e-4647.72Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1VXG1_9STRA7.650e-4243.28Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B7FQ16_PHATC5.150e-4136.29Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A812TAA1_SYMMI1.870e-3943.26EngB protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A7S1ZZ98_TRICV4.000e-3940.65Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A1Z5JKA0_FISSO1.070e-3633.91GTP-binding protein n=1 Tax=Fistulifera solaris Ta... [more]
K0SSQ4_THAOC3.550e-3631.78EngB-type G domain-containing protein n=1 Tax=Thal... [more]
A0A1Y1WK35_9FUNG2.430e-3538.83p-loop containing nucleoside triphosphate hydrolas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:438162..444182 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score685.3
Seed ortholog evalue1.6e-194
Seed eggNOG ortholog2880.D7FRN1
Model size1759
KEGG koko:K03978
Hectar predicted targeting categorymitochondrion
Exons11
EggNOG free text desc.GTP binding
EggNOG OGsCOG0218@1,KOG2486@2759
Ec32 ortholog descriptionYihA1, YihA/EngB-like GTPase
Ec32 orthologEc-12_002430.1
Cds size1071
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.741.1prot_Ecto-sp6_S_contig100.741.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig100 438192..443506 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348725.1282978-UTR-Ecto-sp6_S_contig100:438161..4381911682348725.1282978-UTR-Ecto-sp6_S_contig100:438161..438191Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig100 438162..438191 +
1682348725.2336533-UTR-Ecto-sp6_S_contig100:443506..4439491682348725.2336533-UTR-Ecto-sp6_S_contig100:443506..443949Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig100 443507..443949 +
1682348725.2425442-UTR-Ecto-sp6_S_contig100:443967..4441821682348725.2425442-UTR-Ecto-sp6_S_contig100:443967..444182Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig100 443968..444182 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348725.1370263-CDS-Ecto-sp6_S_contig100:438191..4383711682348725.1370263-CDS-Ecto-sp6_S_contig100:438191..438371Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 438192..438371 +
1682348725.1444829-CDS-Ecto-sp6_S_contig100:438851..4389521682348725.1444829-CDS-Ecto-sp6_S_contig100:438851..438952Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 438852..438952 +
1682348725.1518714-CDS-Ecto-sp6_S_contig100:439377..4394921682348725.1518714-CDS-Ecto-sp6_S_contig100:439377..439492Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 439378..439492 +
1682348725.1594522-CDS-Ecto-sp6_S_contig100:439993..4401241682348725.1594522-CDS-Ecto-sp6_S_contig100:439993..440124Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 439994..440124 +
1682348725.1736908-CDS-Ecto-sp6_S_contig100:440835..4408861682348725.1736908-CDS-Ecto-sp6_S_contig100:440835..440886Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 440836..440886 +
1682348725.1875834-CDS-Ecto-sp6_S_contig100:441458..4415401682348725.1875834-CDS-Ecto-sp6_S_contig100:441458..441540Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 441459..441540 +
1682348725.1968715-CDS-Ecto-sp6_S_contig100:441978..4420171682348725.1968715-CDS-Ecto-sp6_S_contig100:441978..442017Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 441979..442017 +
1682348725.206554-CDS-Ecto-sp6_S_contig100:442229..4423261682348725.206554-CDS-Ecto-sp6_S_contig100:442229..442326Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 442230..442326 +
1682348725.2159345-CDS-Ecto-sp6_S_contig100:442731..4428381682348725.2159345-CDS-Ecto-sp6_S_contig100:442731..442838Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 442732..442838 +
1682348725.2248049-CDS-Ecto-sp6_S_contig100:443338..4435061682348725.2248049-CDS-Ecto-sp6_S_contig100:443338..443506Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 443339..443506 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig100.741.1

>prot_Ecto-sp6_S_contig100.741.1 ID=prot_Ecto-sp6_S_contig100.741.1|Name=mRNA_Ecto-sp6_S_contig100.741.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=357bp
MFRSGFARCRPRQVSATGGLRLSCRQPQGAWTGSSGSTAVRVFSTEPAGP
EISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSA
VPGATVTAAKPRTFDHPTWAVKQLSSATKLEEIPPAAASLPEVALVGRSN
VGKSTLLNALVGLKKHPDQRASVSKTPGETRTLDFFQIGKGKRAKMIIAD
MPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADI
EFLGLLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLE
EVSRRQTNLSIMTLSALKGAGMVELQKELASLDPKPVAAAAAAVPRDGES
EGGDDQ*
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mRNA from alignment at Ecto-sp6_S_contig100:438162..444182+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.741.1 ID=mRNA_Ecto-sp6_S_contig100.741.1|Name=mRNA_Ecto-sp6_S_contig100.741.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6021bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:438162..444182+ (Ectocarpus species6 EcLAC_371)
GACAACCAGCTCGAGAGCGGTCTGGCCAAAATGTTTCGATCAGGCTTCGC GCGATGTCGTCCACGTCAAGTGTCTGCAACTGGCGGCTTGCGATTGAGCT GCCGACAGCCGCAGGGAGCATGGACGGGAAGCAGCGGCAGCACTGCTGTT CGCGTGTTTTCTACGGAACCAGCAGGACCGGAAATCAGCAAGCGGCAGCA ATTCAAACAGGTGTGTGGAATCAGCAAGGTGGACGTCGGGTGGTTGACAG TCCCGCCATGCCACAGAGTATGCAAGAGAGCCACCGCAGCCTTCGTAGAT ATTTACCGATGGCAGCAATGGCAGTCATCCTTCCACACCACGTTGTTGAT TTGGCATGTGCATCAAAAGGGTTCATGTTTCGAAGGGCGAACGTCAGCGT GCTCTTCACCATCTGTATACACCCCAGATAAGTCGCACTGGAACGGATGA TTGGCATGTGCATCAAGAGGGTTCATGTTTCGAAGGGCGAAGGTCAGCGT GCTCTTCACCATCTGTATACACCCCAGATAGGTAGCACTGGAACGGATGA TGGGCTCTAAACGAGAACATGCACAGCCGACTACTGCACACACAACAGGG CGCTATTATACTTACTCCAGTAATGGAAATTTTCTATTGTTTGTTCCCAA CTGAGGCAACCCGCGCCGATGCTTTCGTGTCGCATCATAGATCGCTGTCG ACGCCAAGGTGATGCGGCATTTGGACGCGCTGGGGCTGGGCATGGAGAAA AAAAAAATCGAACGGGGTCGAAAGCTTCGTCTCTACCGAAGGTGCGGTTC TTGGCGACGACCAGACGCTTGCATCGTTACCGCTCGCACGCTGCACTGTT CTCTCGGGTAGACTACACCGCAGTTTGCGCTATGTACGCCACCCCTTTTT CAACGGTCGGCTTGTAGTACATATTGCGGTAGCCTACGCATGCGTTTACC CTGTCCAAACGCGGTACAAACCTGCCTCATCCTTGTCGTCGGTGACCCCG AGCCGGTACCGGTTCTCAATTTGGAACGGGAGTTTGTGTGGCTGTACAAC GTTCAAACTTGCCCGTGGCTGATGCTCCAGTCTGACGCTTCTATCAACAG CGTTCGTTGCATCTGACGAGGCCATCGTCGCAACTCCGACGACTCTTGCC TTCGACCTCGCGCGCTGAATCTCTGCCGGCTCTGCGCCTACAATACCGTC CGCACAACACCTACAGGGGTGCCGTATCCTCTGCCGTGCCTGGAGCTACG GTTACCGCGGCCAAGCCCAGGACGTTCGACCACCCTACGTGGGCCGTGAA GCAGCTATCTTCCGCTACCAAGCTTGAGGAGGTAAAGCGCACGCCCCCAA CCCCTCCTTCCAAAATCGCGCACGCCGGCAGTCAAGCCGCCAGCAGGAGC TCGAAAAGAACCGGAACTATGCTCCGTCTCAACGGAGATGCATGGTTGTC TCCGTTGACACACACACTCCCAGCACCATGTTGATAAATAGGGTAGGGGA AACGTTTTTGAGCCACCTGAGGCAAAGTAGGAAGGAACCATAAGCCGTCG GTGATCGGTCCTATGGGAACAATACTCCGTTCTCTCGAGGACGCGTGGTC AATGGTTTAACAACGAAGGCATGCAGAACATCAGAGTACGCCCCCCCCCA ACACTACCCCACTCAGTGTCGAGACTTGATCGGACGTGCACCGCGAAGAC AAGCCACAAAAAGTGCCCCCGTGCCCCTTCTTCCATCATCCCTGTATATT GTGAAAACCCCAACTCTATTGTGTTTGACACACACACGTGCCGCTGCTGT TGTTGTTACTCTGTTGCTTTTGCTCCTAACAGATCCCCCCTGCGGCAGCT AGCCTCCCCGAGGTAGCCCTGGTTGGCAGGTCCAACGTGGGCAAGTCGAC CCTACTCAACGCACTCGTGGGCCTCAAGAAGCACCCGGACCAGAGAGCCA GCGTCTCAAAAACGTGAGCGCCGGGCGTAGTGTTGGCCGACTTTCGTACG ACCGCTCTGTGAGACAGGACTGCCTACGCGAAGATGTGAAGTCGCTCATC TATGACTACAGAGAGGCAGGGGATACGAAGACTCTAACCCTAGCCGAAAT TCCCACCGATTCCATACAGATCCAACATGCTCGCATAATAGAAACCCTGC GTAGGAAACTGGTAGAGGCACGCGTGTGTTACACAGCCAGTGCATCGATT GTCTTCAGTGGTTCCGCCGGCGCTTCGAGTTGTTTATTTGGACGAGAGAG AGGGCAGTCTTGCTTTTGCTCTTAGATCACAGCAGGCGAAGAGGAACGCT CGTCGTTGAAAACTGTAAGGCAACTAACATCCTGACTTCCGTCATGCGTC ATGTTGGCTACTACCAACACCCCTGCTAGGCTATTTAGATCCAGGAGTAT GTTCGCGCAAGAGTTACGCACCTATTTGCTGTCGAGAGAATCTGATGCAG CCGGGGTGTGTATGCTGAGCTTTCTACGGCTACCAGTAAAGAATATCTCC GTGTCGTCGATCTCAACACATTTGTTGCTACGGGGCAGGATATCGTTTCC TCTCGTTTTTTCGTTTGACCGAGCGGCAGTAGTGGTGGTATTTATCCCTC CAGTCCCCGACTTTTGTTCTGCTCTCGCTCGCTTTCCTGTTGGCCATATG TTGATCGTCGTGCGTGCCCAACAGGCCTGGAGAAACGCGAACGCTCGACT TTTTTCAGATAGGGAAAGGCAAAAGGTGAGCACACAATGTTTTGGGCCAC TTTGCGGGGGGTTTCGACGCATCCCTTTACTGCTGCGCTGTGCGGCTGCT GTCATGCACAGAAAGACCCCCCACGAACGCTGTTCTTTAGCAACTCCGTG GGTGTGCGGGTGGGCCGGTTCCCACCGTATTTCATTTCATTTTGGGGCGA TTTTTGGCCATTCGTCTGTTTATGGCGTGCACACGAACAGCGGAGGCTGG ATGATTTATTCGTTACGGTTTACTCGTGTGCGATCATCTGCCCCTCTCGT TTCGCGTCGCGTATACAAGTTGTGGTTGGATTTCTCGCTGGCCGTTTCGC GAACACGCTGCTGACGCAGCTACGACTGCTGCCGCGTCAAAACTAGTCGT GTCTGCTGTCGGCCCCCATCGACGCCAAAACTGGAGCTTGGTGTGCGACA TGTACTCCGGAATATGTTCGGAACGGGTTTCACACCCATCCTCCAAGCGT CTTCTTTCGTAGAGAAACTTTCTGGATTCCACATTAGGCTTTTCGTAGGC CAGCCGGCCAACTACGGTATGATGTATGTCGTCCGCGCGTTCTGCAGGGC GAAGATGATTATTGCTGATATGCCTGGCTACGGGTTCGCCTACGCGAACG AGGAGCAACGGCAAGACTGGAAGGGGTTGGTGAGCCATCCACCTGCCGTT GTTTTCGATGCACCTGTGAAACATTTTGAAGTTGAGATCGTGGGAGGGGG TGAGGGCGTCAGACCATTTTTGCGCGAACGGCAAAGCACTTGTGAGTGTA CAAAGAAGCGGATGCATTGCACGCGCTGCCACCGAGCGCTGTGGGCGATG CAGATCGCCAAACATGTCGGACGTTTCAGCCTTGCCTTTGACGCCTTTTG GGTCTTTGGTCGGATGTGCAGCAAGCTTTCACGGGCGAGTCATAGCCGTG TGCGTCATGGCTAAATAACATTGGCGAGACAAATCCGTGCGCAGTATTGG TGACATGAGAGCGTTGATAAGTTCATGCTGATTTGTCCCGCTTCGTCTGC CTCCCCCCCCGGACTAATCGTCGGTGCCTTCCTCGGTTGTCGTGTGATTT GGTCCTCGCCACCTCAGATGATGGCCTATCTGCGAGGGCGAGGAGCACCG CTCAAGGTCAGTGGTAGCGACGTCGCAGGATGAAAACCCTCCCCCGCTTG ATGTCTGTGCGTCAGGAGAGATAATCGGGTTAAAGAGGGAGTTGTGGTCA ACTGGCGTCCACGAATATTGTACCGCCCGCTCTCAAGCCCGCCCATTCGT GAAAGCGATGTACGTGGGGTAAATAATGCGATTCTCGTCTGCCTTTTTTT TTGTTGGGCGTTCTGCAGCGAGTCATGCTGCTCCTGGATGCCAGGCACGG TTTCAAGAAGGCGGACATCGAGTTCCTTGGGCTTTTGTACGACCCCAAGG GGCCTTCGCCTCTCGGTAAGACTCCCTTTCAATGTCGCGGACATGAACTC GAACGATGAGGCACCATCTCGTGAGGAAATTTGTACTTGAGTGTTGTAGC CCACGATCGCGGAATTGGTGTGCGCGTCTGCCATGAGAAAACGCTGACAA CCTCTGAGGTGACGTGCGTCCTGTTACTTGAGGTGGCCGTTTTATTTGAC CGGTCAGTTGACGAGCGAATATACGCGCGTGCAAAAGGTTTTTACATGGG GCCCAAATACTGTAGTGGGAAATTTTTTCGCATCACGCCCACCGACGTCT TTCCAAGGAGCGCCCCCTTCCGACCTGCCCCCCTTCAGGATGCTTTTATA CGACCGCGTGGTCGATAGATTCGTCCTAACGTGCGAGTGCGACCCCCCCC CTCCCCTCCATCTCTTGCAGGCAAGTACCGCCCCCCAAAGATCCAGATCT TGCTGACCAAGTGCGACCTGGTGAAGCGGATAGATCTCGCCCGGAGAGTC GTTTTCGTTCGCCAGCAGCTCGAGGAGGTGAGCGCGGAGCGGGAGCGGGA GCGGGAGGTCAACGGCTGCGTGCACCTGCTTTTGCACCTTGCACAGCAGA GACCGCAGAGAACCGGCACAACGGCGACGTGTGCTCTCCTCGGTGGATGA CAATACCACAAAAACGTTGTTGTCTGTCTGCCTGTTGGCgGGGTTGGAGA TCTCTCGGCGCACATGTTTTGTGTACTCTGTGTCGTGCTCCTGTTTCCTC TGGCGCAGCTGCAGGTGCACGCTGGTGCCAGCATACATGGGGACGGAAAC ACGTACACACATTACACCAACCCATGGCGATGAAGAAACCAAACGTTCCA CGTGCATCCGCCCCTTGAAACGCCATCATCCATCCATGTGCATGTGCGTT GACGGAGGACAGGAAACATTCTACCGAAATGGACCTTGCGCTTGCGTCCG TTGTACCTTCTCCCAGGGGCACAAGGGAGTAACTTGAATGTCTATTCTCT GTTGTGCGCCTGCCTACCTGCAATCAGGTCTCGCGGCGACAGACGAACCT GTCGATCATGACCCTCAGCGCGTTGAAGGGGGCGGGGATGGTCGAGCTGC AGAAAGAACTCGCTTCTTTGGACCCCAAGCCGGTGGCGGCGGCAGCAGCT GCCGTCCCTAGAGATGGCGAAAGTGAAGGCGGCGATGATCAATAGTTGTA CATAGCCGACGATATTTCAATAGGGGCTTTGTCGGCAGAAGGAGGGATTG ATGGCGGACGGATTTGTCGCAACTGTTCATCATGATGCCACCCTCTTTTA GTGTCTGCCTCTATTGTTTTTTTAGAAGAAGGCAGCCTGCCTTAAACCAA CCTAACGAAGTTTGACGGATAGAGAATGAAGTTGGGACGGACATTTCCTC CTGTAAACTCGTTTTTGCCAGGGCATCCACCAGGTGGGAAAAACCGTGGA GTACCCTCCACTCTGCAGCGTGCACACCGTCCCTGACGCGGGCTCTCCCG GACTCCGCGGCGCGCGCATTTCTAAAATCGAAATCCTGCTGAATCCTGGG CGTGACAACGCGGGGAACAGACTCTCCCTCCCAGCGATCACAGAAAAAGC GAAAGCACCATTTCTTCGCAGATCCAAACATGTGCCCAACGTAGGTACTC CAACGTCTCCGCGCGGGAGGTCCTTGGTTGGTCTTTGTGTTGCTGCATGC ATCATTTATGGTTTGCGACCGCGGGATAAGATTGCTGAGCGTGAGCGAAA TTGCCGTGAGAAGCGGCAATAGCCGACGGGGAAGGGGAATCAGATCGAGG AATGAACTTGAGAGGGTAAAGCGTGCGTGTCCGTCTCTCCTCATACGCCG CACAAAAAAGCAGGAAAATGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:438162..444182+

>mRNA_Ecto-sp6_S_contig100.741.1 ID=mRNA_Ecto-sp6_S_contig100.741.1|Name=mRNA_Ecto-sp6_S_contig100.741.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1071bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:438162..444182+ (Ectocarpus species6 EcLAC_371)
ATGTTTCGATCAGGCTTCGCGCGATGTCGTCCACGTCAAGTGTCTGCAAC
TGGCGGCTTGCGATTGAGCTGCCGACAGCCGCAGGGAGCATGGACGGGAA
GCAGCGGCAGCACTGCTGTTCGCGTGTTTTCTACGGAACCAGCAGGACCG
GAAATCAGCAAGCGGCAGCAATTCAAACAGATCGCTGTCGACGCCAAGGT
GATGCGGCATTTGGACGCGCTGGGGCTGGGCATGGAGAAAAAAAAAATCG
AACGGGGTCGAAAGCTTCGTCTCTACCGAAGGGGTGCCGTATCCTCTGCC
GTGCCTGGAGCTACGGTTACCGCGGCCAAGCCCAGGACGTTCGACCACCC
TACGTGGGCCGTGAAGCAGCTATCTTCCGCTACCAAGCTTGAGGAGATCC
CCCCTGCGGCAGCTAGCCTCCCCGAGGTAGCCCTGGTTGGCAGGTCCAAC
GTGGGCAAGTCGACCCTACTCAACGCACTCGTGGGCCTCAAGAAGCACCC
GGACCAGAGAGCCAGCGTCTCAAAAACGCCTGGAGAAACGCGAACGCTCG
ACTTTTTTCAGATAGGGAAAGGCAAAAGGGCGAAGATGATTATTGCTGAT
ATGCCTGGCTACGGGTTCGCCTACGCGAACGAGGAGCAACGGCAAGACTG
GAAGGGGTTGATGATGGCCTATCTGCGAGGGCGAGGAGCACCGCTCAAGC
GAGTCATGCTGCTCCTGGATGCCAGGCACGGTTTCAAGAAGGCGGACATC
GAGTTCCTTGGGCTTTTGTACGACCCCAAGGGGCCTTCGCCTCTCGGCAA
GTACCGCCCCCCAAAGATCCAGATCTTGCTGACCAAGTGCGACCTGGTGA
AGCGGATAGATCTCGCCCGGAGAGTCGTTTTCGTTCGCCAGCAGCTCGAG
GAGGTCTCGCGGCGACAGACGAACCTGTCGATCATGACCCTCAGCGCGTT
GAAGGGGGCGGGGATGGTCGAGCTGCAGAAAGAACTCGCTTCTTTGGACC
CCAAGCCGGTGGCGGCGGCAGCAGCTGCCGTCCCTAGAGATGGCGAAAGT
GAAGGCGGCGATGATCAATAG
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