prot_Ecto-sp6_S_contig100.737.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig100.737.1
Unique Nameprot_Ecto-sp6_S_contig100.737.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length770
Homology
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BLAST of mRNA_Ecto-sp6_S_contig100.737.1 vs. uniprot
Match: D7FRN3_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRN3_ECTSI)

HSP 1 Score: 1119 bits (2894), Expect = 0.000e+0
Identity = 601/634 (94.79%), Postives = 604/634 (95.27%), Query Frame = 0 
Query:  136 MVRLPNTATFGELLACAREKRHGALELEGPVYGRDGELDTTLRDGWVRNSCKVDGTLHIGLAVVVSFPRGSQRSLSLTMGPGATIGDVKQRICVDHGIVPSRQGLMICGGAQRLGANVTLKECCVSGVPVGGFSPKGWGELRLELHVAECTTRNSLQQVAMRDSSQGWSASEFRGAVGVGLPSRGTDVLWSPSQPSHLTPSPPVAATYVPQNNEGSSLTTPSSLLRNGASTVETRPAVVEHGSGPYSTVMFALSPSGRALTLTMAPTATVLDAKTQVAAFEGVSPCRQRLLWRGILMEPDGALLRRLGARSGDTLIVGYRVGPGAPPEVMRAVVELEGNAAGDDDAQTADAAISPTHSPSHHRPCGAQRGTVDSSGSSNVDGGIPDQGTSGVESAAVVADGDENNDVVAPXXXXXXXXXXXSGMDVDEPAGAWVNVVRNGGVDVVDGAQRGSGSGEAEQDGNASGAMSSPPSEARSGSEKSGGQRAWWAKRMATRSLKGSRSSNEQGWGATGAAAALRGAVGASPLSASTPSADSTNNSADTRRVRVSPAPAVPFRQNATHGVDRVGWRILRGIGAGGASSVYDSPLSSAAARRQQRFIPSVGRPKLKVWARWKYGRRVPTPPVPPAGDGGGRG 769
            MVRLPNTATFGELLA AREKRHGALELEGPVYGRDGELDTTLRDGWVRNSCKVDGTLHIGLAVVVSFPRGSQRSLSLTMGPGATIGDVKQRICVDHGIVPSRQGLMICGGAQRLGANVTLKECCV GVPVGGFSPKGWGELRLELHVAECTTRNSLQ VAMRDSSQGWSASEFRGAVGVGLPSRGTDVL SPSQPSHLTPSPPVAATYVPQNNEGSSLTTPSSL RNGASTVETRP V EHGSGPYSTVMFALSPSGRALTLTMAPTATVLDAKTQVAAFEGVSPCRQRLLWRGILMEPDGALLRRLGAR GDTLIVGYRVGPGAPPEVMR VVELEGNAAGDDDAQ ADAAISPTHSPSHHRPCGAQRGTVDSSGSSN+DGGIP+QGTSGVESAA VADGDENNDVVAPXXXXXXXXXXXSGMDVDEPAGAWVNVVRNGGVDVVDGAQRGSGSGEAEQDGNASGA SSPPSEARSGSEKSGGQRAWWAKRMATRSLKGSRSSNEQGWGATGA AALR  VGAS LSASTPSADSTNNSADTRRVRVSP PAVP  QNATHGVDR G RILRGIGAGGASS+YDSP        QQRFIPSVGRPKLKVWARWKYGRRVPTPPVP AGDGGGRG
Sbjct:    1 MVRLPNTATFGELLARAREKRHGALELEGPVYGRDGELDTTLRDGWVRNSCKVDGTLHIGLAVVVSFPRGSQRSLSLTMGPGATIGDVKQRICVDHGIVPSRQGLMICGGAQRLGANVTLKECCVWGVPVGGFSPKGWGELRLELHVAECTTRNSLQ-VAMRDSSQGWSASEFRGAVGVGLPSRGTDVLRSPSQPSHLTPSPPVAATYVPQNNEGSSLTTPSSLHRNGASTVETRPTV-EHGSGPYSTVMFALSPSGRALTLTMAPTATVLDAKTQVAAFEGVSPCRQRLLWRGILMEPDGALLRRLGARGGDTLIVGYRVGPGAPPEVMRPVVELEGNAAGDDDAQNADAAISPTHSPSHHRPCGAQRGTVDSSGSSNIDGGIPEQGTSGVESAAAVADGDENNDVVAPXXXXXXXXXXXSGMDVDEPAGAWVNVVRNGGVDVVDGAQRGSGSGEAEQDGNASGATSSPPSEARSGSEKSGGQRAWWAKRMATRSLKGSRSSNEQGWGATGATAALRXXVGASSLSASTPSADSTNNSADTRRVRVSPTPAVPVHQNATHGVDRAGVRILRGIGAGGASSMYDSPXXXXXXXXQQRFIPSVGRPKLKVWARWKYGRRVPTPPVPHAGDGGGRG 632
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRN3_ECTSI0.000e+094.79Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 196..263
e-value: 4.5E-5
score: 25.1
coord: 377..455
e-value: 1.6E-8
score: 36.2
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 391..451
e-value: 8.1E-8
score: 31.9
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 391..459
score: 11.333
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 381..460

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:397925..401722 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.737.1mRNA_Ecto-sp6_S_contig100.737.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig100 397925..401722 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig100.737.1 ID=prot_Ecto-sp6_S_contig100.737.1|Name=mRNA_Ecto-sp6_S_contig100.737.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=770bp
MAGDGFVVIVALEPRPLPSLGLDERFTRIDYTATCTMLDVLEDMARVLRV
PTGDLTLLESAGLEAVDLTNTLSEYHGQHTAPCSSVFAGKRHQWPRYVKR
QRKEINLKVKHTPVPHQLVTCTVEGGKGRNVLRRAMVRLPNTATFGELLA
CAREKRHGALELEGPVYGRDGELDTTLRDGWVRNSCKVDGTLHIGLAVVV
SFPRGSQRSLSLTMGPGATIGDVKQRICVDHGIVPSRQGLMICGGAQRLG
ANVTLKECCVSGVPVGGFSPKGWGELRLELHVAECTTRNSLQQVAMRDSS
QGWSASEFRGAVGVGLPSRGTDVLWSPSQPSHLTPSPPVAATYVPQNNEG
SSLTTPSSLLRNGASTVETRPAVVEHGSGPYSTVMFALSPSGRALTLTMA
PTATVLDAKTQVAAFEGVSPCRQRLLWRGILMEPDGALLRRLGARSGDTL
IVGYRVGPGAPPEVMRAVVELEGNAAGDDDAQTADAAISPTHSPSHHRPC
GAQRGTVDSSGSSNVDGGIPDQGTSGVESAAVVADGDENNDVVAPDGGGG
DGGGGGSGMDVDEPAGAWVNVVRNGGVDVVDGAQRGSGSGEAEQDGNASG
AMSSPPSEARSGSEKSGGQRAWWAKRMATRSLKGSRSSNEQGWGATGAAA
ALRGAVGASPLSASTPSADSTNNSADTRRVRVSPAPAVPFRQNATHGVDR
VGWRILRGIGAGGASSVYDSPLSSAAARRQQRFIPSVGRPKLKVWARWKY
GRRVPTPPVPPAGDGGGRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-like_domsf