mRNA_Ecto-sp6_S_contig100.728.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig100.728.1
Unique NamemRNA_Ecto-sp6_S_contig100.728.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: A0A6H5L0P4_9PHAE (Swi3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0P4_9PHAE)

HSP 1 Score: 835 bits (2157), Expect = 3.690e-300
Identity = 511/591 (86.46%), Postives = 531/591 (89.85%), Query Frame = 1 
Query:    1 MSESEEERRPRPIGVADGSDEDSGMERTDAAGANNGSEPGRDSTGVAAPEEATTAKKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDRAEEREDEELAGSRYAMEVDGDGGDEGKSDRQVAAEGSAAAMSDQVRQRIEANRRLALDRLRLKK-QXXXXXXXXXXXXXXXXXXGGAVAVPAANDGSREVEDLEEDLMDVDGGGGPGDSFDDDEAALADMEAEEMAARPVAAEALRGKNTVAEPGPAAVVTSPPSTLAVESEETAGALDEEQASPERTIREDEAMEDAGSGASCANTAAAVVADDANDPAPVSAAADGVARGGARAAGAGCAGSVDEASAKCAVAAARGGEPGTTAGEESGGELPPASEPGAPAPGVGGGRERDGANDEAASLGTTAAXXXXGA--NGITGGAKLDDAVLGGGDXXXXAPEPVAANGDEEGASFSSPAKCK---AAASGLPLSPLGSLFAGTDVSAEGGLAVARKPLGGLFSDENV 1755
            MSESEEERRPRPIGVADGS EDSGMERTDAAGANNG+EPG DSTGVAAPEE TTAKKVSNRPPAFSENHLVKEKGLWQ+YKDFPQKC+Y GRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKL GRARTRSL+RELRDTERDRVLEAK+GREAVDDVH+QEAARLAAKESKTAAAEGDRAEEREDEE AGSRY MEVDGDGGDEGKSDRQVAAEGSAAAMS+QVRQRIEANRRLALDRLR KK +    XXXXXXXXXXXXXX       AANDGSREVEDLEEDLMDVDGGGGPGD FDDDEAALADME E+MAARPVAAEA R KNTVAEPGPA V TSP STLAVES+ETAGA+DEE A PE +IREDEAMED GS AS ANTAAAVVADDA DPAPVSAAADGVARGGARAAGAGCAG+VDEA A  A  AA GGEP  TAGEESGGELPPASEPG P PGVGGG++RDGANDEAASL T  AXXXX    +GITGGAK+DDAVL    XXXXAPEPVAA GDEEGASFSSPAKC+   AAASGLPLSPLG+LFAGTDVSAEGGLAV R+PLGGLFSDENV
Sbjct:    1 MSESEEERRPRPIGVADGSGEDSGMERTDAAGANNGTEPGLDSTGVAAPEEVTTAKKVSNRPPAFSENHLVKEKGLWQVYKDFPQKCRYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLAGRARTRSLMRELRDTERDRVLEAKFGREAVDDVHSQEAARLAAKESKTAAAEGDRAEEREDEEFAGSRYTMEVDGDGGDEGKSDRQVAAEGSAAAMSEQVRQRIEANRRLALDRLRSKKHEASVAXXXXXXXXXXXXXXXXXXXXXAANDGSREVEDLEEDLMDVDGGGGPGDGFDDDEAALADMETEQMAARPVAAEASRRKNTVAEPGPAVVSTSPASTLAVESDETAGAVDEELAPPEPSIREDEAMEDTGSRASGANTAAAVVADDAKDPAPVSAAADGVARGGARAAGAGCAGNVDEAPATWAADAAGGGEPDATAGEESGGELPPASEPGTPGPGVGGGQDRDGANDEAASLRTMTAXXXXXXXXDGITGGAKVDDAVLXXXXXXXXAPEPVAAKGDEEGASFSSPAKCRSATAAASGLPLSPLGTLFAGTDVSAEGGLAVVREPLGGLFSDENV 591
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BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: D7FKE8_ECTSI (Swi3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE8_ECTSI)

HSP 1 Score: 767 bits (1980), Expect = 2.670e-274
Identity = 480/589 (81.49%), Postives = 483/589 (82.00%), Query Frame = 1 
Query:    1 MSESEEERRPRPIGVADGSDEDSGMERTDAAGANNGSEPGRDSTGVAAPEEATTAKKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDRAEEREDEELAGSRYAMEVDGDGGDEGKSDRQVAAEGSAAAMSDQVRQRIEANRRLALDRLRLKKQXXXXXXXXXXXXXXXXXXGGAVAVPAANDGSREVEDLEEDLMDVDGGGGPGDSFDDDEAALADMEAEEMAARPVAAEALRGKNTVAEPGPAAVVTSPPSTLAVESEETAGALDEEQASPERTIREDEAMEDAGSGASCANTAAAVVADDANDPAPVSAAADGVARGGARAAGAGCAGSVDEASAKCAVAAARGGEPGTTAGEESGGELPPASEPGAPAPGVGGGRERDGANDEAASLGTTAAXXXXGANGITGGAKLDDAVLGGGDXXXXAPEPVAANGDEEGASFSSPAKCKAA----ASGLPLSPLGSLFAGTDVSAEGGLAVARKPLGGLFSDENV 1755
            MSESEEERRPRPIGVADGSDEDSGMERTDAAGANNGSEPGRDSTGVAAPEEATTAKKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQY GRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLA RTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDR EEREDEELAGSRYAMEVDGDGGDEGKSDRQVAAEGSAA MSDQVRQRIEANRRLALDRLRLKKQ XXXXXXXXXXXXXXXXX         NDGSREVED EEDLMDVDGGGGPGDSFDDDEAALADMEAEEMAARPVAAEA RGKNTVAEPGPAAVVTSPPSTLAVE                                                              GARAAGAGCAGSVDEASAKCAVAAAR GEPGTTAGEESGGELPPASEP APAPGVGGGRERDGANDEAASLGTTAA    GA+GITGGAKLDDAVLG   XXXX             ASFSSPAKC+      ASGLPLSPLGSLFAGTDVSAEGGLAVAR+PLGGLFSDENV
Sbjct:    1 MSESEEERRPRPIGVADGSDEDSGMERTDAAGANNGSEPGRDSTGVAAPEEATTAKKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLACRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDRVEEREDEELAGSRYAMEVDGDGGDEGKSDRQVAAEGSAATMSDQVRQRIEANRRLALDRLRLKKQEXXXXXXXXXXXXXXXXX---XXXXXXNDGSREVEDPEEDLMDVDGGGGPGDSFDDDEAALADMEAEEMAARPVAAEASRGKNTVAEPGPAAVVTSPPSTLAVER-------------------------------------------------------------GARAAGAGCAGSVDEASAKCAVAAARSGEPGTTAGEESGGELPPASEPSAPAPGVGGGRERDGANDEAASLGTTAAASAAGADGITGGAKLDDAVLGXXXXXXXXXXXXXXXXXXXXASFSSPAKCRXXXXXXASGLPLSPLGSLFAGTDVSAEGGLAVAREPLGGLFSDENV 525
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BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: A0A836CM34_9STRA (Swi3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM34_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.120e-22
Identity = 60/113 (53.10%), Postives = 76/113 (67.26%), Query Frame = 1 
Query:  148 EEATTAKK-VSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVD 483
            EE   AKK    R P FSE  LV+ KGL +I  DFP++ +   +G+E EFL  LM  YKEWGYQLYP +AFEDLA R E LGG+ R R  L  +RD ERDR + A++G++AV+
Sbjct:   52 EEGKPAKKPAKRRAPPFSEVQLVEGKGLMKIRDDFPKRLKPCVKGKEREFLSRLMFLYKEWGYQLYPSLAFEDLAVRIETLGGKERVRGHLAMMRDEERDRCVRARHGKDAVE 164
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BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: A0A397E7Y0_9STRA (Swi3 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397E7Y0_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.780e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 1 
Query:  169 KVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNG---RGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDR 447
            KV+ +   FSE HL+  +GL  +Y  FP    +N     G E E LR L+ AYKEW Y+LYPG+ FEDL  +TE L  +A   S + +LR  ER R
Sbjct:   48 KVTKKRATFSEQHLLGPRGLSLVYSTFP--THFNRAVTHGNEGEALRELITAYKEWAYELYPGLNFEDLVDKTEALAKKAAVSSFIADLRQQERKR 141
[Close]
BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: A0A397BHD7_9STRA (Swi3 domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BHD7_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 4.750e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 1 
Query:  169 KVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNG---RGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDR 447
            KV+ +   FSE HL+  +GL  +Y  FP    +N     G E E LR L+ AYKEW Y+LYPG+ FEDL  +TE L  +A   S + +LR  ER R
Sbjct:   48 KVTKKRATFSEQHLLGPRGLSLVYSTFP--THFNRAVTHGNEGEALRELITAYKEWAYELYPGLNFEDLVDKTEALAKKAAVSSFIADLRQQERKR 141
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BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: A0A482SX14_9ARCH (Swi3 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SX14_9ARCH)

HSP 1 Score: 77.4 bits (189), Expect = 5.790e-13
Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 1 
Query:  166 KKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDR 447
            KK  N  P F E  LV   GL +IY +FP + +Y  + +E +FLR L+  YKEW +QL+PG++FED   +   L  ++R RS + ELRD ER R
Sbjct:   59 KKAKNAKP-FDEALLVGPHGLSRIYHEFPLRIRYQ-KNQEVQFLRQLLSLYKEWAFQLHPGLSFEDAILKISTLSHKSRVRSAVTELRDLERIR 150
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BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: M4BUG3_HYAAE (Swi3 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BUG3_HYAAE)

HSP 1 Score: 76.6 bits (187), Expect = 9.530e-13
Identity = 38/110 (34.55%), Postives = 60/110 (54.55%), Query Frame = 1 
Query:  154 ATTAKKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVD 483
            A++      R     E+HL+  +G  ++Y+ FP +      GREA  L  L+  YK+W Y LYPG+ FED   RTE L    + + L+ E+R+ ER + +E + G++  D
Sbjct:   39 ASSTPSKKRRRNLLRESHLLSAEGFKKVYRTFPYQVSSTVSGREAPALASLIKMYKQWAYDLYPGLNFEDFVDRTETLAKGHQVQGLMAEMREKERRKRVERRCGKDEED 148
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BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: A0A6A3STA2_9STRA (Swi3 domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3STA2_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 9.750e-13
Identity = 36/95 (37.89%), Postives = 56/95 (58.95%), Query Frame = 1 
Query:  172 VSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLE 456
            V  R     E+HLV  +GL ++++ FP +   +  GREA+ L  L+  YK+W + LYPG+ FED   R E LG   + + L+ +LR+ E+ + LE
Sbjct:    7 VQRRRNLLRESHLVSAEGLKKVHRTFPYQVSADVSGREAQALASLIKMYKQWAFDLYPGLNFEDFVERAEALGKSHQVQGLVADLREKEKLKALE 101
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BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: A0A6G0QIQ9_9STRA (Swi3 domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0QIQ9_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.390e-12
Identity = 45/123 (36.59%), Postives = 67/123 (54.47%), Query Frame = 1 
Query:   88 AAGANNGSEPGRDSTGVAAPEEATTAKKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRVLE 456
            AAGA  GS+   D    AA     T +    R     E+HLV  +GL ++++ FP +   +  GREA+ L  L+  YK+W + LYPG+ FED   R E LG   + + L+ +LR+ E+ + LE
Sbjct:   22 AAGATAGSQDAVDDLVTAAAASVPTKR----RRNLLRESHLVSAEGLKKVHRTFPYQVSADVSGREAQALASLIKMYKQWAFDLYPGLNFEDFVERAEALGKSHQVQGLVADLREKEKLKALE 140
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BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Match: A0A3R6ZL68_9STRA (Swi3 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZL68_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.490e-12
Identity = 44/96 (45.83%), Postives = 55/96 (57.29%), Query Frame = 1 
Query:  169 KVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNG---RGREAEFLRGLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDR 447
            K   +   FSE HL+  KG   +Y  FP    +NG    G E+E LR L+ AYKEW Y+LYPG+ FEDL  RTE +  +A   S L +LR  ER R
Sbjct:   49 KAKKKRATFSEQHLLGPKGFSLVYSSFP--THFNGAVTNGNESEALRELITAYKEWAYELYPGLNFEDLVDRTEIIAKKATVSSYLSDLRQQERKR 142
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.728.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0P4_9PHAE3.690e-30086.46Swi3 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FKE8_ECTSI2.670e-27481.49Swi3 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CM34_9STRA2.120e-2253.10Swi3 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A397E7Y0_9STRA1.780e-1344.79Swi3 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A397BHD7_9STRA4.750e-1344.79Swi3 domain-containing protein n=5 Tax=Aphanomyces... [more]
A0A482SX14_9ARCH5.790e-1344.68Swi3 domain-containing protein n=1 Tax=archaeon Ta... [more]
M4BUG3_HYAAE9.530e-1334.55Swi3 domain-containing protein n=1 Tax=Hyaloperono... [more]
A0A6A3STA2_9STRA9.750e-1337.89Swi3 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A6G0QIQ9_9STRA1.390e-1236.59Swi3 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A3R6ZL68_9STRA1.490e-1245.83Swi3 domain-containing protein n=1 Tax=Aphanomyces... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:324448..326703 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score780.8
Seed ortholog evalue4.5e-223
Seed eggNOG ortholog2880.D7FKE8
Preferred nameCSM3
Model size1758
KEGG koko:K10904,ko:K10998
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000075,GO:0000076,GO:0000077,GO:0000217,GO:0000228,GO:0000278,GO:0000280,GO:0000403,GO:0000785,GO:0000790,GO:0000819,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007064,GO:0007093,GO:0007346,GO:0007530,GO:0007531,GO:0007533,GO:0007534,GO:0008150,GO:0008152,GO:0008156,GO:0008284,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010453,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0016043,GO:0019219,GO:0019222,GO:0022402,GO:0022413,GO:0022414,GO:0030154,GO:0031298,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031494,GO:0031570,GO:0031573,GO:0031974,GO:0031981,GO:0032502,GO:0032505,GO:0032991,GO:0033262,GO:0033554,GO:0034085,GO:0034087,GO:0034641,GO:0034645,GO:0035822,GO:0042127,GO:0043111,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043388,GO:0043570,GO:0043596,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044770,GO:0044773,GO:0044774,GO:0045005,GO:0045132,GO:0045165,GO:0045595,GO:0045786,GO:0045930,GO:0045934,GO:0046483,GO:0048285,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051098,GO:0051099,GO:0051101,GO:0051171,GO:0051172,GO:0051276,GO:0051321,GO:0051716,GO:0051726,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0071514,GO:0071515,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090329,GO:0097159,GO:0098813,GO:0140013,GO:0140014,GO:1901360,GO:1901363,GO:1901576,GO:1903046,GO:1903047,GO:2000104,GO:2000112,GO:2000113,GO:2000241
Exons2
EggNOG free text desc.replication fork protection
EggNOG OGsKOG3004@1,KOG3004@2759
Ec32 ortholog descriptionReplication fork protection component Swi3
Ec32 orthologEc-12_002330.1
Cds size1758
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348723.927553-CDS-Ecto-sp6_S_contig100:324447..3259201682348723.927553-CDS-Ecto-sp6_S_contig100:324447..325920Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 324448..325920 -
1682348723.9391696-CDS-Ecto-sp6_S_contig100:326418..3267031682348723.9391696-CDS-Ecto-sp6_S_contig100:326418..326703Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 326419..326703 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.728.1prot_Ecto-sp6_S_contig100.728.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig100 324448..326703 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig100.728.1

>prot_Ecto-sp6_S_contig100.728.1 ID=prot_Ecto-sp6_S_contig100.728.1|Name=mRNA_Ecto-sp6_S_contig100.728.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=586bp
MSESEEERRPRPIGVADGSDEDSGMERTDAAGANNGSEPGRDSTGVAAPE
EATTAKKVSNRPPAFSENHLVKEKGLWQIYKDFPQKCQYNGRGREAEFLR
GLMVAYKEWGYQLYPGVAFEDLASRTEKLGGRARTRSLLRELRDTERDRV
LEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDRAEEREDEELAGSRYA
MEVDGDGGDEGKSDRQVAAEGSAAAMSDQVRQRIEANRRLALDRLRLKKQ
EAAAAAAAAALVAEKENDGGAVAVPAANDGSREVEDLEEDLMDVDGGGGP
GDSFDDDEAALADMEAEEMAARPVAAEALRGKNTVAEPGPAAVVTSPPST
LAVESEETAGALDEEQASPERTIREDEAMEDAGSGASCANTAAAVVADDA
NDPAPVSAAADGVARGGARAAGAGCAGSVDEASAKCAVAAARGGEPGTTA
GEESGGELPPASEPGAPAPGVGGGRERDGANDEAASLGTTAAAAGAGANG
ITGGAKLDDAVLGGGDGGGGAPEPVAANGDEEGASFSSPAKCKAAASGLP
LSPLGSLFAGTDVSAEGGLAVARKPLGGLFSDENV*
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mRNA from alignment at Ecto-sp6_S_contig100:324448..326703-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.728.1 ID=mRNA_Ecto-sp6_S_contig100.728.1|Name=mRNA_Ecto-sp6_S_contig100.728.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2256bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:324448..326703- (Ectocarpus species6 EcLAC_371)
ATGTCCGAGTCTGAGGAAGAGCGCCGGCCTCGACCCATTGGCGTCGCAGA
CGGAAGCGATGAAGACAGCGGCATGGAGCGAACCGATGCGGCCGGCGCTA
ACAACGGGAGCGAGCCTGGGCGGGATTCGACGGGGGTGGCGGCGCCAGAA
GAGGCCACCACTGCAAAGAAGGTCTCAAACAGGCCGCCCGCTTTCTCGGA
GAACCACTTGGTCAAGGAGAAAGGGTTGTGGCAGATTTACAAGGACTTCC
CTCAAAAGTGTCAGTACAACGGCAGGGGACGCGAGGTACAGCAGCTCTAC
AGCAGTCTCTGTTTGAGTTTTTGAATTTTTGTACCGTTTTTGTATCGAGA
GACGTTCAGTCTCGACAGGAGGTGGCGTGCTGTGGTCGCCGGTGTACTCT
TTCGTGGATGCAAGGGTTAGGCTGGATCATAACGCCCAAGGTTCTCGACG
TTCTCCCTCGTATCAGTCACCCGCCTCGTGCTTTTTCTCTCGTGCTGCAG
TATGTATGCCCATGAACTGCGGTGGAACATCCTGGGTGTCCGAGCAACTG
GCAATGTCCCGCGCACACTTGCTGTGTGTAGGCGGGGAAAATATTACACA
AATGCGGTCGGCCACTTACCAGCAGCGGGCAAGTAGATTGCGCACCACGT
TACACTCTCAAACGTTCCACCCCCGTCACCAATGACAGATCCCCCGCATC
ACTCCCGACGACGCAAGGTCAATGGTCTAACTATGCAAGCCTCAAGTACG
CCCCCCCCATCCGCCCCCTCAATCGGCACCTAGGCCGAGTTCCTGCGAGG
TCTGATGGTCGCCTACAAGGAGTGGGGCTACCAGCTGTACCCAGGGGTCG
CCTTCGAGGACCTGGCCAGCCGGACGGAGAAGCTGGGCGGCAGGGCCCGC
ACCCGCAGCCTCTTGCGCGAGCTCCGGGACACGGAGCGGGACCGCGTGCT
GGAGGCCAAGTACGGCCGAGAGGCCGTAGACGACGTCCACGCGCAGGAGG
CAGCAAGGCTCGCCGCCAAGGAGAGCAAGACGGCGGCCGCCGAGGGGGAC
CGGGCCGAGGAGCGCGAGGACGAGGAACTCGCGGGTAGTCGCTACGCCAT
GGAGGTGGACGGAGACGGGGGCGACGAGGGAAAAAGTGACCGTCAGGTCG
CCGCCGAAGGGTCAGCGGCGGCCATGTCGGACCAGGTACGGCAACGCATC
GAGGCGAACCGCCGGTTGGCGCTCGACCGACTGCGCTTGAAAAAACAAGA
AGCGGCGGCGGCGGCGGCGGCGGCGGCGTTGGTGGCAGAAAAGGAGAACG
ACGGGGGTGCTGTTGCCGTGCCCGCTGCGAACGACGGCAGCAGAGAAGTC
GAGGATCTGGAGGAGGATCTGATGGACGTAGATGGCGGCGGCGGGCCGGG
CGACAGCTTCGATGACGACGAAGCGGCGCTTGCGGACATGGAGGCAGAAG
AAATGGCCGCCCGGCCGGTTGCTGCTGAGGCCTTACGGGGGAAGAACACC
GTGGCGGAACCCGGGCCTGCTGCCGTTGTCACGTCCCCTCCTTCGACCTT
GGCGGTGGAGAGCGAGGAGACTGCTGGTGCCTTGGACGAGGAACAGGCGT
CGCCGGAGCGAACGATACGAGAAGACGAGGCAATGGAGGACGCCGGAAGC
GGAGCTTCCTGTGCTAATACTGCTGCTGCCGTTGTGGCCGATGATGCCAA
CGACCCGGCCCCTGTTTCTGCCGCCGCTGATGGGGTTGCAAGAGGGGGGG
CACGTGCAGCAGGCGCAGGGTGCGCCGGCAGCGTTGACGAAGCGTCGGCA
AAATGCGCTGTTGCTGCTGCAAGAGGTGGCGAGCCCGGTACTACCGCGGG
AGAGGAGAGTGGCGGCGAGCTGCCTCCCGCTTCGGAGCCGGGCGCACCAG
CCCCGGGCGTAGGCGGCGGGCGAGAGAGAGACGGTGCGAACGATGAAGCT
GCCTCATTGGGAACGACGGCGGCGGCGGCGGGGGCAGGGGCTAATGGAAT
TACGGGGGGTGCTAAGTTAGATGATGCGGTTTTGGGCGGTGGTGATGGTG
GTGGAGGTGCCCCAGAGCCTGTAGCGGCGAACGGAGACGAGGAGGGGGCG
TCGTTCAGTAGTCCTGCCAAGTGCAAGGCGGCGGCGAGCGGTTTGCCGCT
GTCGCCGCTCGGCAGCCTGTTCGCCGGTACTGATGTTTCTGCGGAGGGGG
GGCTGGCGGTGGCGAGGAAGCCGCTAGGAGGACTCTTCTCGGACGAAAAC
GTCTAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:324448..326703-

>mRNA_Ecto-sp6_S_contig100.728.1 ID=mRNA_Ecto-sp6_S_contig100.728.1|Name=mRNA_Ecto-sp6_S_contig100.728.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1758bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:324448..326703- (Ectocarpus species6 EcLAC_371)
ATGTCCGAGTCTGAGGAAGAGCGCCGGCCTCGACCCATTGGCGTCGCAGA
CGGAAGCGATGAAGACAGCGGCATGGAGCGAACCGATGCGGCCGGCGCTA
ACAACGGGAGCGAGCCTGGGCGGGATTCGACGGGGGTGGCGGCGCCAGAA
GAGGCCACCACTGCAAAGAAGGTCTCAAACAGGCCGCCCGCTTTCTCGGA
GAACCACTTGGTCAAGGAGAAAGGGTTGTGGCAGATTTACAAGGACTTCC
CTCAAAAGTGTCAGTACAACGGCAGGGGACGCGAGGCCGAGTTCCTGCGA
GGTCTGATGGTCGCCTACAAGGAGTGGGGCTACCAGCTGTACCCAGGGGT
CGCCTTCGAGGACCTGGCCAGCCGGACGGAGAAGCTGGGCGGCAGGGCCC
GCACCCGCAGCCTCTTGCGCGAGCTCCGGGACACGGAGCGGGACCGCGTG
CTGGAGGCCAAGTACGGCCGAGAGGCCGTAGACGACGTCCACGCGCAGGA
GGCAGCAAGGCTCGCCGCCAAGGAGAGCAAGACGGCGGCCGCCGAGGGGG
ACCGGGCCGAGGAGCGCGAGGACGAGGAACTCGCGGGTAGTCGCTACGCC
ATGGAGGTGGACGGAGACGGGGGCGACGAGGGAAAAAGTGACCGTCAGGT
CGCCGCCGAAGGGTCAGCGGCGGCCATGTCGGACCAGGTACGGCAACGCA
TCGAGGCGAACCGCCGGTTGGCGCTCGACCGACTGCGCTTGAAAAAACAA
GAAGCGGCGGCGGCGGCGGCGGCGGCGGCGTTGGTGGCAGAAAAGGAGAA
CGACGGGGGTGCTGTTGCCGTGCCCGCTGCGAACGACGGCAGCAGAGAAG
TCGAGGATCTGGAGGAGGATCTGATGGACGTAGATGGCGGCGGCGGGCCG
GGCGACAGCTTCGATGACGACGAAGCGGCGCTTGCGGACATGGAGGCAGA
AGAAATGGCCGCCCGGCCGGTTGCTGCTGAGGCCTTACGGGGGAAGAACA
CCGTGGCGGAACCCGGGCCTGCTGCCGTTGTCACGTCCCCTCCTTCGACC
TTGGCGGTGGAGAGCGAGGAGACTGCTGGTGCCTTGGACGAGGAACAGGC
GTCGCCGGAGCGAACGATACGAGAAGACGAGGCAATGGAGGACGCCGGAA
GCGGAGCTTCCTGTGCTAATACTGCTGCTGCCGTTGTGGCCGATGATGCC
AACGACCCGGCCCCTGTTTCTGCCGCCGCTGATGGGGTTGCAAGAGGGGG
GGCACGTGCAGCAGGCGCAGGGTGCGCCGGCAGCGTTGACGAAGCGTCGG
CAAAATGCGCTGTTGCTGCTGCAAGAGGTGGCGAGCCCGGTACTACCGCG
GGAGAGGAGAGTGGCGGCGAGCTGCCTCCCGCTTCGGAGCCGGGCGCACC
AGCCCCGGGCGTAGGCGGCGGGCGAGAGAGAGACGGTGCGAACGATGAAG
CTGCCTCATTGGGAACGACGGCGGCGGCGGCGGGGGCAGGGGCTAATGGA
ATTACGGGGGGTGCTAAGTTAGATGATGCGGTTTTGGGCGGTGGTGATGG
TGGTGGAGGTGCCCCAGAGCCTGTAGCGGCGAACGGAGACGAGGAGGGGG
CGTCGTTCAGTAGTCCTGCCAAGTGCAAGGCGGCGGCGAGCGGTTTGCCG
CTGTCGCCGCTCGGCAGCCTGTTCGCCGGTACTGATGTTTCTGCGGAGGG
GGGGCTGGCGGTGGCGAGGAAGCCGCTAGGAGGACTCTTCTCGGACGAAA
ACGTCTAG
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