mRNA_Ecto-sp6_S_contig100.727.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig100.727.1
Unique NamemRNA_Ecto-sp6_S_contig100.727.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match: D7FKE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE9_ECTSI)

HSP 1 Score: 1297 bits (3357), Expect = 0.000e+0
Identity = 816/855 (95.44%), Postives = 820/855 (95.91%), Query Frame = 1 
Query:   34 MPKEATCDVECAMKVEEIRIMSKKRKQSQRVGG-NGALASEEGANISAKAAKRPLSNSNGCGAGTQSAKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----SKHAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKSLGXXXXXXXXXXXXXXXXXXXXXDDVKDFSPGRGRDAETPECGSSCDCVDTSKLSGGSGFGGGSSSLAEADGRGEAARSKSTTGFAQAASGDEGAEGSGGGAKASAQLAGGGTEAVGGAQRLQLPGEAAAGEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQGREHVPQHPAEFSGGSGGGRMPRAFPSSAAGTTTAT-AASAVGFCPPSDLQYAGSIVGAEGNNRVPKEVHLVGGGCGSGVSTAGYSSNLSDSSSLVWSGGGEDKLAGSPKEAEQGGRGAAAAERPRRRERPGVLNHAGASQLEGAAAADVSMDSARAAASKARPSVADHIRGDGTGEHLGDGQQQQQFDPAAMREAFSVQAGAGRVVAPSHSQGLSGRQGAGLAAPRGYMAGDYTLTPKAPEDGGAGRLAPHARGQPAVLGAELLAGEGALGAHKSIFAARSPAEARVALASATLAPVTSTGNASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNFGQRGWCGGXXXXXXXXXXVATPAFGEAGGGALRGGSGAGKEGGXNGDGAGADLGNSKEQQRLDSLSLQPSDAGDPSAMMGLLPQDDMFDFGMLDREGELKSALGDSTPPGPPVARPNGDEHSTLFSFLME 2577
            MPKEATCDVECAMKVEEIRIMSKKRKQSQRVGG NGALASEEGANISAKAAKRPLSNSNGCGAGTQSAKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     SKHAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKSLGXXXXXXXXXXXXXXXXXXXXXDDVKDFSPGRGRDAETPECGSSCDCVDTSKLSGGSG GGGS+SLAE DGRGEAARSKSTTGFAQAASGDEGA+GSGGGAKASAQLAGGGTEAVGGAQRLQLPGEAAAGEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQGREHVPQHPAEFSG                       AASAVGFCPPSDLQYAGSIVGAEGN RVPKEVHLVGGGCGSGVSTAGYSSNLSDSSSLVWSGGGEDKLAGSPKEAEQGGRGAAAAERPRRRERPGVLNHAGASQLEGAAAADVSMDSARAAASKARPSVADH+RGDGTGE LGDGQQQQQFDPAAMREAFSVQA AGRVVAPSHSQGLSGRQGAGLA PRGYMAGDYTLTPKAPEDGG+GRLAPHARGQPAVLGAELLAGEGALGAHKSIFAARSPAEARVALASATLAPVTSTGNASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNFGQRGWCGGXXXXXXXXXXVATPAFGEAGGGALRGGSGAGKEGGXNGDGAGADLGNSKEQQRLDSLSLQPSDAGDPSAMMGLLPQDDMFDFGMLDREGELKSALGDSTPPGPPVARPNGDEHSTLFSFLME
Sbjct:    1 MPKEATCDVECAMKVEEIRIMSKKRKQSQRVGGGNGALASEEGANISAKAAKRPLSNSNGCGAGTQSAKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKSLGXXXXXXXXXXXXXXXXXXXXXDDVKDFSPGRGRDAETPECGSSCDCVDTSKLSGGSGIGGGSNSLAETDGRGEAARSKSTTGFAQAASGDEGAKGSGGGAKASAQLAGGGTEAVGGAQRLQLPGEAAAGEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQGREHVPQHPAEFSGXXXXXXXXXXXXXXXXXXXXXXXAASAVGFCPPSDLQYAGSIVGAEGNIRVPKEVHLVGGGCGSGVSTAGYSSNLSDSSSLVWSGGGEDKLAGSPKEAEQGGRGAAAAERPRRRERPGVLNHAGASQLEGAAAADVSMDSARAAASKARPSVADHMRGDGTGERLGDGQQQQQFDPAAMREAFSVQAVAGRVVAPSHSQGLSGRQGAGLAPPRGYMAGDYTLTPKAPEDGGSGRLAPHARGQPAVLGAELLAGEGALGAHKSIFAARSPAEARVALASATLAPVTSTGNASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNFGQRGWCGGXXXXXXXXXXVATPAFGEAGGGALRGGSGAGKEGGXNGDGAGADLGNSKEQQRLDSLSLQPSDAGDPSAMMGLLPQDDMFDFGMLDREGELKSALGDSTPPGPPVARPNGDEHSTLFSFLME 855
[Close]
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match: A0A6H5KUD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUD1_9PHAE)

HSP 1 Score: 1012 bits (2617), Expect = 0.000e+0
Identity = 673/875 (76.91%), Postives = 692/875 (79.09%), Query Frame = 1 
Query:    1 MKMARGESSLRMPKEATCDVECAMKVEEIRIMSKKRKQSQRVGGNGALASEEGANISAKAAKRPLSNSNGCGAGTQSAKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKSLGXXXXXXXXXXXXXXXXXXXXXDDVKDFSPGRGRDAETPECGSSCDCVDTSKLSGGSGFGGGSSSLAEADGRGEAARSKSTTGFAQAASGDEGAEGSGGGAKASAQLAGGGTEAVGGAQRLQLPGEAAAGEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQGREHVPQHPAEFSGGSGGGRMP----RAFPSSAAGTTTATAASAVGFCPPSDLQYAGSIVGAEGNNRVPKEVHLVGGGCGSGVSTAGYSSNLSDSSSLVWSGGGEDKLAGSPKEAEQGGRGAAAAERPRRRERPGVLNHAGASQLEGAAAADVSMDSARAAASKARPSVADHIRGDGTGEHLGDGQQQQQFDPAAMREAFSVQAGAGRVVAPSHSQGLSGRQGAGLAAPRGYMAGDYTLTPKAPEDGGAGRLAPHARGQPAVLGAELLAGEGALGAHKSIFAARSPAEARVALASATLAPVTSTGNASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNFGQRGWCGGXXXXXXXXXX------------VATPAFGEAGGGALRGGSGAGKEGGXNGDGAGADLGNSKEQQRLDSLSLQPSDAGDPSAMMGLLPQDDMFDFGMLDREGELKSALGDSTPPGPPVARPNGDEHSTLFSFLME 2577
            MK A+GESSLRMPKEATCDVECAMKVEEIRIMSKKRKQSQRVG                                      XXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    A+RRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQK R                                       XXXXXXXXX D+KDFSPGRGRDAETP CGSSCDCVDTS LSGGSG            G GEAARSKSTTGFAQ A+ DEGAEGSGGGAKASAQLAGGGTEAVGGAQRLQLPGEAA GEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQG EH+P+HPAEFSG            RAFP         T ASAVG CPPSDLQYAGS VGAE NNR PKEVHLVGGGCGSGVSTAG SS LSDSSSLVWS GGED+ AGSPKEAEQGG+ AA AERPRRRERP  LN+ GASQLE AAAADVSMD+ARA ASKAR SVADHIRGDGTGEHLGD QQQQQFDPAAMREAFSVQAGAGR V PSHSQGLSGRQGAGLAAP+ Y+ GDYTLTPKAP++GGAGR+AP  RGQPAVLGAELL GEGALGAHK+IFAARSPAEAR ALA+A LAPVTST NASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNF +RGWCGG  XXXXXXXX            VATPAFGEAGGGALRGGSG GKEG  NG GAGADLGN+KEQQRLDSLSLQPSDAGDPSAMMGLL QDDMFDFGMLDREGELKSA GDSTPPG  VARPNGDEHSTLFSFLME
Sbjct:    1 MKKAKGESSLRMPKEATCDVECAMKVEEIRIMSKKRKQSQRVGXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXXPSPADQLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKPRX------------------------------------AAXXXXXXXXXXDLKDFSPGRGRDAETPGCGSSCDCVDTSNLSGGSGVXXXXXXXXXXXGSGEAARSKSTTGFAQTANRDEGAEGSGGGAKASAQLAGGGTEAVGGAQRLQLPGEAA-GEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQGTEHLPKHPAEFSGXXXXXXXXXXXXRAFPXXXXXXXXXTTASAVGVCPPSDLQYAGSNVGAEANNRAPKEVHLVGGGCGSGVSTAGCSSTLSDSSSLVWSRGGEDRPAGSPKEAEQGGKDAAPAERPRRRERPCALNYEGASQLEAAAAADVSMDAARATASKARQSVADHIRGDGTGEHLGDAQQQQQFDPAAMREAFSVQAGAGR-VGPSHSQGLSGRQGAGLAAPQRYVPGDYTLTPKAPKNGGAGRVAPQPRGQPAVLGAELLGGEGALGAHKAIFAARSPAEARAALAAAALAPVTSTDNASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNFDRRGWCGGGGXXXXXXXXXXGGXXXXXXXXVATPAFGEAGGGALRGGSGVGKEGSGNGHGAGADLGNNKEQQRLDSLSLQPSDAGDPSAMMGLLHQDDMFDFGMLDREGELKSAPGDSTPPGSAVARPNGDEHSTLFSFLME 826
[Close]
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match: A0A835YR85_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR85_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 6.380e-20
Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 1 
Query:  412 RFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSY 609
            RFVW   LH  FV A+FDVGLK ASP++LL+MMP   GLT+EH+KSHLQK+RLHR +SREEFL  +
Sbjct:    1 RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDPQGLTTEHVKSHLQKFRLHRDKSREEFLTKH 66
[Close]
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match: A0A6S6I5N2_9STRA (Phosphorus starvation response 1 n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A6S6I5N2_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.360e-19
Identity = 48/74 (64.86%), Postives = 61/74 (82.43%), Query Frame = 1 
Query:  388 SKHAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSY 609
            + ++ +R+RFVW   LH+DFVAA+FDVGLKCASPK +LEMM     LT +HIKSHLQKYRLHR+R+REEFL+ +
Sbjct:   70 NNNSKARKRFVWPDDLHRDFVAAIFDVGLKCASPKTILEMMNNTKDLTPDHIKSHLQKYRLHRERAREEFLQHF 143
[Close]
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match: W7U4E9_9STRA (Two-component response regulator arr12 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4E9_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.070e-19
Identity = 47/74 (63.51%), Postives = 61/74 (82.43%), Query Frame = 1 
Query:  388 SKHAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSY 609
            S+ + +++RFVW   LH+DFVAA+FDVGLKCASPK ++EMM     LT +HIKSHLQKYRLHR+R+REEFL+ +
Sbjct:   49 SESSKAKKRFVWPDDLHRDFVAAIFDVGLKCASPKTIMEMMSNTKELTPDHIKSHLQKYRLHRERAREEFLQHF 122
[Close]
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match: A0A7S3QDX4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QDX4_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.030e-16
Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 1 
Query:  409 RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 612
            RRF W   LH+DFV+AVFDVGLK +SP  LLE MP  + +TSE IKSHLQKYRLHRQ+S++EF+ SY+
Sbjct:  158 RRFAWPDELHRDFVSAVFDVGLKHSSPSALLEQMPKHEDITSERIKSHLQKYRLHRQKSKKEFMSSYD 225
[Close]
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match: A0A7S3LD31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LD31_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.120e-16
Identity = 40/68 (58.82%), Postives = 54/68 (79.41%), Query Frame = 1 
Query:  409 RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 612
            +RF W   LH+DFVAA+FDVGLK +SP  +LE MP  + +TSE +KSHLQKYR+HR +S++EF+ SY+
Sbjct:   84 KRFTWPDDLHRDFVAAIFDVGLKHSSPSTILEHMPKHEQITSERVKSHLQKYRIHRIKSKKEFMSSYD 151
[Close]
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match: A0A4D9DAJ4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAJ4_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 6.120e-15
Identity = 41/62 (66.13%), Postives = 54/62 (87.10%), Query Frame = 1 
Query:  430 PLHQ-DFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 612
            P H+ DFV AVF +GL+C+SPK+L+++MP+ D LT+EHIKSHLQKYRLH QRS+EEF++ YN
Sbjct:  287 PQHETDFVGAVFKLGLQCSSPKVLMDLMPMTDTLTTEHIKSHLQKYRLHGQRSKEEFVEYYN 348
[Close]
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match: K3X7I1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7I1_GLOUD)

HSP 1 Score: 88.2 bits (217), Expect = 6.690e-15
Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = 1 
Query:  391 KHAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVV---DGLTSEHIKSHLQKYRLHRQRSREEFLKSYNY 615
            K+    +RF+W   LH+ FVAA+FDVGLK ASPK LL +M V     GLT+EH+KSHLQKYRL+ +RSR EFL+ Y++
Sbjct:   87 KYERKTKRFIWPDELHRLFVAAIFDVGLKNASPKALLGLMGVAGPDSGLTTEHLKSHLQKYRLNYERSRAEFLEFYDH 164
[Close]
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Match: W7TSM2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSM2_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.250e-14
Identity = 41/62 (66.13%), Postives = 54/62 (87.10%), Query Frame = 1 
Query:  430 PLHQ-DFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 612
            P H+ DFV AVF +GL+C+SPK+L+++MP+ D LT+EHIKSHLQKYRLH QRS+EEF++ YN
Sbjct:  316 PQHETDFVGAVFKLGLQCSSPKVLMDLMPMTDTLTTEHIKSHLQKYRLHGQRSKEEFVEYYN 377
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.727.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKE9_ECTSI0.000e+095.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUD1_9PHAE0.000e+076.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YR85_9STRA6.380e-2066.67Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A6S6I5N2_9STRA1.360e-1964.86Phosphorus starvation response 1 n=1 Tax=Nannochlo... [more]
W7U4E9_9STRA2.070e-1963.51Two-component response regulator arr12 n=2 Tax=Mon... [more]
A0A7S3QDX4_9STRA1.030e-1666.18Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S3LD31_9STRA3.120e-1658.82Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A4D9DAJ4_9STRA6.120e-1566.13Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K3X7I1_GLOUD6.690e-1557.69Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
W7TSM2_9STRA1.250e-1466.13Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:318808..322467 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score90.1
Seed ortholog evalue5.4e-15
Seed eggNOG ortholog65071.PYU1_T013180
Preferred namePCL1
Model size2580
Hectar predicted targeting categoryother localisation
GOsGO:0000156,GO:0000160,GO:0001101,GO:0001763,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0006950,GO:0007154,GO:0007165,GO:0007275,GO:0007568,GO:0007623,GO:0008150,GO:0009266,GO:0009409,GO:0009414,GO:0009415,GO:0009628,GO:0009653,GO:0009719,GO:0009723,GO:0009725,GO:0009735,GO:0009736,GO:0009755,GO:0009873,GO:0009888,GO:0009889,GO:0009909,GO:0009933,GO:0009966,GO:0009987,GO:0010014,GO:0010015,GO:0010016,GO:0010033,GO:0010035,GO:0010073,GO:0010074,GO:0010075,GO:0010082,GO:0010119,GO:0010150,GO:0010223,GO:0010346,GO:0010380,GO:0010468,GO:0010492,GO:0010556,GO:0010646,GO:0019219,GO:0019222,GO:0019827,GO:0022622,GO:0023051,GO:0023052,GO:0031323,GO:0031326,GO:0031537,GO:0032501,GO:0032502,GO:0032870,GO:0035556,GO:0040008,GO:0042221,GO:0042752,GO:0042753,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048364,GO:0048366,GO:0048367,GO:0048507,GO:0048509,GO:0048511,GO:0048518,GO:0048532,GO:0048580,GO:0048583,GO:0048638,GO:0048646,GO:0048731,GO:0048827,GO:0048831,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051193,GO:0051239,GO:0051252,GO:0051716,GO:0060089,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071368,GO:0071369,GO:0071495,GO:0080022,GO:0080036,GO:0080050,GO:0080090,GO:0080113,GO:0090056,GO:0090506,GO:0090693,GO:0098727,GO:0099402,GO:0140110,GO:1901401,GO:1901463,GO:1901700,GO:1903506,GO:1905392,GO:1905393,GO:2000026,GO:2000112,GO:2000241,GO:2000280,GO:2001141
Exons3
EggNOG free text desc.DNA-binding transcription factor activity
EggNOG OGs1MGPT@121069,2C4RN@1,2RIEW@2759
Ec32 ortholog descriptionG2-like domain Myb transcription factor
Ec32 orthologEc-12_002320.1
Cds size2580
COG Functional cat.K
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348723.8776975-CDS-Ecto-sp6_S_contig100:318807..3213451682348723.8776975-CDS-Ecto-sp6_S_contig100:318807..321345Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 318808..321345 -
1682348723.8915892-CDS-Ecto-sp6_S_contig100:321960..3219811682348723.8915892-CDS-Ecto-sp6_S_contig100:321960..321981Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 321961..321981 -
1682348723.9005613-CDS-Ecto-sp6_S_contig100:322446..3224671682348723.9005613-CDS-Ecto-sp6_S_contig100:322446..322467Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 322447..322467 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.727.1prot_Ecto-sp6_S_contig100.727.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig100 318808..322467 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig100.727.1

>prot_Ecto-sp6_S_contig100.727.1 ID=prot_Ecto-sp6_S_contig100.727.1|Name=mRNA_Ecto-sp6_S_contig100.727.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=860bp
MKMARGESSLRMPKEATCDVECAMKVEEIRIMSKKRKQSQRVGGNGALAS
EEGANISAKAAKRPLSNSNGCGAGTQSAKSGGGGGGGGSVPPPADQISAA
SAGVAAPNLSKASSASAAGGGGSGGGGKDSKHAASRRRFVWSVPLHQDFV
AAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFL
KSYNYLTDLDGGKSLGGGSAAATVAKAAAAAAGGGGGDDVKDFSPGRGRD
AETPECGSSCDCVDTSKLSGGSGFGGGSSSLAEADGRGEAARSKSTTGFA
QAASGDEGAEGSGGGAKASAQLAGGGTEAVGGAQRLQLPGEAAAGEVVNG
ALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQGREHVPQH
PAEFSGGSGGGRMPRAFPSSAAGTTTATAASAVGFCPPSDLQYAGSIVGA
EGNNRVPKEVHLVGGGCGSGVSTAGYSSNLSDSSSLVWSGGGEDKLAGSP
KEAEQGGRGAAAAERPRRRERPGVLNHAGASQLEGAAAADVSMDSARAAA
SKARPSVADHIRGDGTGEHLGDGQQQQQFDPAAMREAFSVQAGAGRVVAP
SHSQGLSGRQGAGLAAPRGYMAGDYTLTPKAPEDGGAGRLAPHARGQPAV
LGAELLAGEGALGAHKSIFAARSPAEARVALASATLAPVTSTGNASNGQE
TLTLQRHMQAQMSMQQSMLSACNDQATNFGQRGWCGGGGPPAAAAAAVAT
PAFGEAGGGALRGGSGAGKEGGGNGDGAGADLGNSKEQQRLDSLSLQPSD
AGDPSAMMGLLPQDDMFDFGMLDREGELKSALGDSTPPGPPVARPNGDEH
STLFSFLME*
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mRNA from alignment at Ecto-sp6_S_contig100:318808..322467-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.727.1 ID=mRNA_Ecto-sp6_S_contig100.727.1|Name=mRNA_Ecto-sp6_S_contig100.727.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3660bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:318808..322467- (Ectocarpus species6 EcLAC_371)
ATGAAGATGGCCAGAGGCGAGGTGAGGCTGGCGATGGGTGCACGGTTGAT
GTTGGCTCAATTTTGAGCCTTTCGGCCCCGGTGAACCTGGTGAGCAGGTC
ACACCCTTCTAGCAGAGTAAAGGTGTTCAACAACACATCAGCAGACACCG
CTCAGAATGCTCTGCTGTGAAGTTGCACGAAATGCGATGTTCTAGCCTCT
GGGACTACGCGCTTCTTCCATGCGTGCTCGCGCGTCACAGGTAGCCTTCG
CCATTCTCGACAGGTATGAGAGAGGCAGCAGTATCAAGAGGCCATCGAAG
TCGATAGTTGAGGTCTAGTGCGAACCAAAATGTTTTTTCGTCGTCGGTTT
TTAGTTGTGTGCTGGCGTGACGATTCAGCCGCCCATCTCCACTGCAGCAA
GTCTCACTCCTGTGCCGCTGCTCCTCCCTCCCTGCTACGCTCCTCTTGGC
CTTGCGCGTCATCTGGCCCCATCTCATGTACTCAAGTCCTCCCTCCGAAT
GCCGAAGGTGAGTCTTCCTTGCTTGCATCTGTCACGCACATGTGTGATCC
AATTTATTCCTTTCCTTTCGCTCCCCGTTAATACTGCTGTACCATCTGCT
AGCTTAGTACTCCTTGAGCCACTGGCAAGTTCAGTGATTTTTCGAAGACA
TCCCGGCACGTCGATAGAAGTTACACCTCTCAGCGGGACAAGGCGGGGGG
GGTGGCGGGGTACACTGACGTGCGCGTTTTATTCTGAAAGTCGACCACGT
GTGGATGGTTGGTTGTTTTATGCTTCTTCAGTCCCTTGGAGGAGGGCTCC
CGAATGCTCTCTTGCTTACAACTTACAACACATGGCAGTAGGAAAAGGCA
GACCATGTATATATACATGCCCCGTACTCGAAGGGAGATTAATTGATTAT
CAAAGGTTGATCGATAAGCCGCTGCCGTACAGTCTGTCGCAAGCTTTTGT
GGGACGCACGTCGCCCATGCTTTCCTAGAACAATAAAAAGTACTTGTTTA
TACTCCTTTGTATGCGTGCAAAGAGGAGACAACCCGTTCGTTACCCTGCC
GGCATGCCGACCGACCAACGCCCCGCTTGCAAACGCCCCGCTCGCAAACG
CCCCGCTCCCACCCGGCCACAGGAGGCGACCTGCGACGTCGAGTGTGCCA
TGAAGGTAGAGGAGATTCGCATCATGAGCAAGAAGCGCAAGCAGTCTCAG
CGGGTCGGCGGCAACGGGGCCTTGGCCTCCGAAGAGGGCGCAAATATCAG
CGCAAAGGCGGCCAAGCGGCCCTTGTCGAACAGTAACGGCTGCGGGGCGG
GCACGCAGTCCGCCAAGAGCGGCGGCGGCGGCGGCGGCGGTGGCTCCGTG
CCTCCTCCTGCGGACCAAATTTCGGCGGCCTCCGCGGGAGTGGCGGCGCC
GAACCTATCGAAGGCGTCTTCGGCTTCGGCGGCCGGCGGCGGCGGCAGCG
GCGGCGGCGGCAAGGACTCCAAACACGCCGCCTCTCGCCGGCGGTTCGTC
TGGTCCGTGCCCCTGCACCAGGACTTCGTGGCGGCGGTCTTTGACGTTGG
GCTCAAGTGCGCGTCGCCCAAGCTCCTCCTGGAGATGATGCCCGTTGTGG
ACGGGCTCACCTCCGAGCACATCAAGAGCCACCTACAGAAGTACCGCCTG
CACAGGCAGCGCTCCCGGGAGGAGTTCCTAAAGAGCTACAACTACCTCAC
CGACCTGGACGGCGGCAAGAGCCTGGGCGGGGGCTCGGCGGCCGCCACCG
TTGCCAAGGCCGCGGCAGCGGCCGCGGGCGGCGGCGGCGGCGACGACGTT
AAAGACTTTTCGCCCGGGCGCGGGCGGGACGCGGAGACTCCGGAGTGTGG
GTCGAGTTGCGACTGCGTTGACACGTCCAAACTCAGCGGGGGCAGCGGGT
TCGGGGGCGGCAGCAGCAGTCTCGCCGAAGCGGACGGGAGAGGGGAGGCG
GCGCGCTCGAAATCGACGACGGGGTTTGCGCAGGCTGCGAGCGGGGACGA
AGGTGCCGAGGGGAGCGGGGGCGGCGCCAAGGCGAGCGCGCAGCTGGCCG
GAGGCGGGACGGAGGCGGTCGGCGGGGCGCAGCGGCTGCAGCTGCCCGGG
GAGGCGGCGGCGGGGGAGGTAGTCAACGGCGCGCTGCTCCTGTCGCACCT
GGAGCTCCTCGCCAAAGGGATCGACATGCAGGTCAAGTTCCACAACCACC
TGCGGGAGGTGGTCGAGAGCCAGCAGCAGCTGCAGGCCCAGCTCGTGAGA
CAACAGGGCAGGGAGCACGTCCCCCAGCACCCGGCCGAGTTTTCCGGCGG
CAGCGGCGGCGGCAGGATGCCGAGGGCCTTCCCGTCGAGCGCCGCGGGGA
CCACCACCGCGACTGCGGCTTCAGCCGTCGGCTTTTGTCCGCCGTCGGAC
TTGCAGTACGCGGGCAGCATCGTCGGCGCAGAGGGCAACAACCGGGTGCC
GAAAGAAGTGCACCTGGTTGGCGGCGGCTGCGGCAGCGGGGTGTCCACGG
CTGGATACAGCAGCAATCTCTCGGATTCGAGCAGCCTGGTGTGGTCGGGT
GGAGGGGAAGACAAGCTTGCCGGCTCGCCCAAGGAAGCGGAACAGGGGGG
CAGAGGTGCCGCCGCAGCGGAACGACCGAGACGAAGAGAACGGCCGGGCG
TACTGAACCACGCTGGGGCGTCGCAGCTAGAAGGGGCTGCGGCGGCCGAT
GTTTCGATGGACTCCGCTCGCGCCGCCGCTTCCAAGGCCCGCCCGAGCGT
CGCCGACCACATTCGCGGGGACGGGACGGGTGAGCATCTCGGCGATGGTC
AACAGCAACAGCAGTTCGACCCGGCAGCAATGCGAGAGGCGTTTTCTGTG
CAGGCGGGCGCGGGGAGGGTGGTGGCTCCTTCCCATTCTCAGGGCCTGTC
GGGCCGCCAGGGAGCGGGCTTAGCAGCGCCCCGGGGATACATGGCCGGAG
ACTACACGCTCACGCCCAAAGCCCCGGAGGACGGCGGTGCAGGTAGGCTA
GCCCCGCACGCTCGCGGGCAGCCGGCGGTGTTAGGGGCGGAGTTGTTGGC
CGGAGAGGGGGCGTTAGGGGCCCACAAGTCGATCTTTGCGGCGCGTAGCC
CGGCGGAAGCCCGGGTTGCCTTGGCCTCCGCCACCCTTGCTCCGGTGACC
TCGACTGGCAACGCGAGCAACGGGCAGGAGACGCTGACGCTGCAGCGACA
CATGCAGGCGCAGATGTCGATGCAGCAGAGCATGCTCTCGGCGTGCAACG
ACCAGGCGACTAACTTCGGCCAGCGCGGGTGGTGCGGGGGAGGGGGGCCG
CCGGCAGCGGCGGCGGCGGCGGTGGCTACTCCTGCGTTCGGCGAGGCGGG
CGGCGGCGCGCTCCGCGGCGGTAGTGGAGCGGGGAAGGAGGGCGGTGGGA
ACGGTGATGGGGCGGGGGCAGACCTGGGGAACAGCAAGGAGCAGCAGCGC
CTCGATTCGCTGTCCCTGCAACCCTCCGATGCGGGGGACCCCTCGGCGAT
GATGGGCCTCCTCCCCCAAGACGACATGTTTGACTTCGGCATGCTCGACC
GCGAGGGTGAGTTGAAGTCGGCGCTTGGAGACAGTACCCCTCCCGGCCCC
CCAGTGGCTCGGCCTAACGGGGACGAGCACTCGACCCTGTTTTCGTTCTT
GATGGAATAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:318808..322467-

>mRNA_Ecto-sp6_S_contig100.727.1 ID=mRNA_Ecto-sp6_S_contig100.727.1|Name=mRNA_Ecto-sp6_S_contig100.727.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2580bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:318808..322467- (Ectocarpus species6 EcLAC_371)
ATGAAGATGGCCAGAGGCGAGTCCTCCCTCCGAATGCCGAAGGAGGCGAC
CTGCGACGTCGAGTGTGCCATGAAGGTAGAGGAGATTCGCATCATGAGCA
AGAAGCGCAAGCAGTCTCAGCGGGTCGGCGGCAACGGGGCCTTGGCCTCC
GAAGAGGGCGCAAATATCAGCGCAAAGGCGGCCAAGCGGCCCTTGTCGAA
CAGTAACGGCTGCGGGGCGGGCACGCAGTCCGCCAAGAGCGGCGGCGGCG
GCGGCGGCGGTGGCTCCGTGCCTCCTCCTGCGGACCAAATTTCGGCGGCC
TCCGCGGGAGTGGCGGCGCCGAACCTATCGAAGGCGTCTTCGGCTTCGGC
GGCCGGCGGCGGCGGCAGCGGCGGCGGCGGCAAGGACTCCAAACACGCCG
CCTCTCGCCGGCGGTTCGTCTGGTCCGTGCCCCTGCACCAGGACTTCGTG
GCGGCGGTCTTTGACGTTGGGCTCAAGTGCGCGTCGCCCAAGCTCCTCCT
GGAGATGATGCCCGTTGTGGACGGGCTCACCTCCGAGCACATCAAGAGCC
ACCTACAGAAGTACCGCCTGCACAGGCAGCGCTCCCGGGAGGAGTTCCTA
AAGAGCTACAACTACCTCACCGACCTGGACGGCGGCAAGAGCCTGGGCGG
GGGCTCGGCGGCCGCCACCGTTGCCAAGGCCGCGGCAGCGGCCGCGGGCG
GCGGCGGCGGCGACGACGTTAAAGACTTTTCGCCCGGGCGCGGGCGGGAC
GCGGAGACTCCGGAGTGTGGGTCGAGTTGCGACTGCGTTGACACGTCCAA
ACTCAGCGGGGGCAGCGGGTTCGGGGGCGGCAGCAGCAGTCTCGCCGAAG
CGGACGGGAGAGGGGAGGCGGCGCGCTCGAAATCGACGACGGGGTTTGCG
CAGGCTGCGAGCGGGGACGAAGGTGCCGAGGGGAGCGGGGGCGGCGCCAA
GGCGAGCGCGCAGCTGGCCGGAGGCGGGACGGAGGCGGTCGGCGGGGCGC
AGCGGCTGCAGCTGCCCGGGGAGGCGGCGGCGGGGGAGGTAGTCAACGGC
GCGCTGCTCCTGTCGCACCTGGAGCTCCTCGCCAAAGGGATCGACATGCA
GGTCAAGTTCCACAACCACCTGCGGGAGGTGGTCGAGAGCCAGCAGCAGC
TGCAGGCCCAGCTCGTGAGACAACAGGGCAGGGAGCACGTCCCCCAGCAC
CCGGCCGAGTTTTCCGGCGGCAGCGGCGGCGGCAGGATGCCGAGGGCCTT
CCCGTCGAGCGCCGCGGGGACCACCACCGCGACTGCGGCTTCAGCCGTCG
GCTTTTGTCCGCCGTCGGACTTGCAGTACGCGGGCAGCATCGTCGGCGCA
GAGGGCAACAACCGGGTGCCGAAAGAAGTGCACCTGGTTGGCGGCGGCTG
CGGCAGCGGGGTGTCCACGGCTGGATACAGCAGCAATCTCTCGGATTCGA
GCAGCCTGGTGTGGTCGGGTGGAGGGGAAGACAAGCTTGCCGGCTCGCCC
AAGGAAGCGGAACAGGGGGGCAGAGGTGCCGCCGCAGCGGAACGACCGAG
ACGAAGAGAACGGCCGGGCGTACTGAACCACGCTGGGGCGTCGCAGCTAG
AAGGGGCTGCGGCGGCCGATGTTTCGATGGACTCCGCTCGCGCCGCCGCT
TCCAAGGCCCGCCCGAGCGTCGCCGACCACATTCGCGGGGACGGGACGGG
TGAGCATCTCGGCGATGGTCAACAGCAACAGCAGTTCGACCCGGCAGCAA
TGCGAGAGGCGTTTTCTGTGCAGGCGGGCGCGGGGAGGGTGGTGGCTCCT
TCCCATTCTCAGGGCCTGTCGGGCCGCCAGGGAGCGGGCTTAGCAGCGCC
CCGGGGATACATGGCCGGAGACTACACGCTCACGCCCAAAGCCCCGGAGG
ACGGCGGTGCAGGTAGGCTAGCCCCGCACGCTCGCGGGCAGCCGGCGGTG
TTAGGGGCGGAGTTGTTGGCCGGAGAGGGGGCGTTAGGGGCCCACAAGTC
GATCTTTGCGGCGCGTAGCCCGGCGGAAGCCCGGGTTGCCTTGGCCTCCG
CCACCCTTGCTCCGGTGACCTCGACTGGCAACGCGAGCAACGGGCAGGAG
ACGCTGACGCTGCAGCGACACATGCAGGCGCAGATGTCGATGCAGCAGAG
CATGCTCTCGGCGTGCAACGACCAGGCGACTAACTTCGGCCAGCGCGGGT
GGTGCGGGGGAGGGGGGCCGCCGGCAGCGGCGGCGGCGGCGGTGGCTACT
CCTGCGTTCGGCGAGGCGGGCGGCGGCGCGCTCCGCGGCGGTAGTGGAGC
GGGGAAGGAGGGCGGTGGGAACGGTGATGGGGCGGGGGCAGACCTGGGGA
ACAGCAAGGAGCAGCAGCGCCTCGATTCGCTGTCCCTGCAACCCTCCGAT
GCGGGGGACCCCTCGGCGATGATGGGCCTCCTCCCCCAAGACGACATGTT
TGACTTCGGCATGCTCGACCGCGAGGGTGAGTTGAAGTCGGCGCTTGGAG
ACAGTACCCCTCCCGGCCCCCCAGTGGCTCGGCCTAACGGGGACGAGCAC
TCGACCCTGTTTTCGTTCTTGATGGAATAG
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