mRNA_Ecto-sp6_S_contig100.725.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig100.725.1
Unique NamemRNA_Ecto-sp6_S_contig100.725.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: A0A6H5L9A2_9PHAE (Fe-ADH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9A2_9PHAE)

HSP 1 Score: 760 bits (1962), Expect = 1.210e-273
Identity = 403/428 (94.16%), Postives = 414/428 (96.73%), Query Frame = 1
Query:    1 MRCRLASIRRNLSSRLSPNPKLIVEAECSWTKVVAQVSRHGRTCLAIADDNTPGQAAGRCLFELRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGQNKVARELLAIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVVGDMLSQASSFSGDAQAAEAIERALSISASLFLGDGNDGQALMSWLEAQEHELLDFGSLSSVDSTITAKDVATNIDMLLAIEEDTDAADRVWSAGGTADMADLIVG 1284
            MRCRL SIRR LSS  SP+PKLIVEA+CSWTKVVAQVSRHGRTCLAIADDNTPGQA GRCLFELRKAGINCAMFTGRGAYPTAD IDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGE G+SKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAE+GESLTVALVDPILCTSLSK+QTAAMALTALSACVDALLA EL+LASGTPLQNGDALLDLGRRGI AVAEGLPVALADG+NK+ARELL IGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVVGDMLSQA+SFSGDAQAAEAIERALS+SASLFLGDGNDGQALMSWLEAQE ELLDFGSLSSVDSTITAKDV TNIDMLLAIEEDT AADRVWSAGGT+DMAD IVG
Sbjct:    1 MRCRLVSIRRKLSSCPSPSPKLIVEADCSWTKVVAQVSRHGRTCLAIADDNTPGQAVGRCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEDGHSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEEGESLTVALVDPILCTSLSKSQTAAMALTALSACVDALLARELALASGTPLQNGDALLDLGRRGIDAVAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVVGDMLSQANSFSGDAQAAEAIERALSLSASLFLGDGNDGQALMSWLEAQERELLDFGSLSSVDSTITAKDVVTNIDMLLAIEEDTAAADRVWSAGGTSDMADHIVG 428          
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: A0A1V9ZLN1_9STRA (Fe-ADH domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZLN1_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 4.060e-14
Identity = 85/312 (27.24%), Postives = 138/312 (44.23%), Query Frame = 1
Query:   49 SPNPKLIVEAECSWTKVVAQVSRHGRTCLAIADDNTPGQAAGRCLFELRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLD-LGRRGIGAVAEGLPVALADGQNKVA----RELLAIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVV 969
            S +P+++   + S    V       +  L    D+   + A    + L+KA I C MFT +    T DSI++AR+ ARR+GA  +++ G G  +DT++A A L ++ G  +     P  +                A PL+ +PT AG G+  +   LV     E  +   +      V ++DP+L  S+    T+  ALTAL  C+++ L           +  GD  +D +   GI  VAE L   L DG+ ++     RE L++GS+ +   + AT       V    G +     +  VCA   P V+
Sbjct:   29 SQHPRVLFGRKQSEQLSVVAPKVMSKALLVRDRDSGSEKRAQYAQYLLQKANIPCFMFTLQRDCATIDSINQARDHARRVGANGVIAFGGGNVMDTSRAIAALMANDGNAEDLAQGPLSLSH-------------RAAPLIVMPTVAGCGSEVSNEALVLDESAEAKLTFTKTPIIAEVVIIDPLLTVSVPMALTSQGALTALGQCIESFL-----------MNTGDEKVDEICLNGIRTVAEALASPLKDGKLQLNDMGFRERLSLGSLYSSLASCATGFGAAHSVGIGVGGMSDT-PHLQVCAAFLPLVI 315          
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: A0A2R6GGT4_9EURY (Alcohol dehydrogenase n=3 Tax=unclassified Halobacteriales TaxID=38063 RepID=A0A2R6GGT4_9EURY)

HSP 1 Score: 80.5 bits (197), Expect = 1.460e-12
Identity = 82/270 (30.37%), Postives = 125/270 (46.30%), Query Frame = 1
Query:   58 PKLIVEAECSWTKVVAQVSRHGRTCLAIADDNTPGQAAGRCLFELRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESL-TVALVDPILCTSLSKTQTAAMALTALSACVDALL---AWELSLASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGQNKVARELLAIGSVCAGQ 855
            P+ +V    +  +V  ++   G T L +A     G+   R    L  AGI+ A++      PT +++ EA E  R  G  C+V++G G  IDTAKA   L ++ G  +++     G    EG       PA +  PL A+PT+AG G+ A  R +V   +      L    E L TVA+ DP L  +L  + TA   + AL+  ++A +   AW +S               L R  I  V   LP + A+G +  ARE + +G + AGQ
Sbjct:   10 PEQVVVGRGAVDEVGDRLGERGSTALIVATGGVFGRYGDRVRDSLAAAGIDAAVYDEVRPDPTVENVREALETYRASGCDCLVALGGGSPIDTAKAVGVLAANGGEIREYAVDRAGY---EG------VPA-SIPPLAAVPTTAGTGSEAT-RSIVISDESTATKFLVVSTEVLPTVAVEDPELVATLPPSHTAFTGVDALTHAIEAYVSVHAWSMSDT-------------LARAAIERVGTALPASWANGDDLDAREAMLVGQLQAGQ 255          
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: A0A7C4R5N7_9DELT (Iron-containing alcohol dehydrogenase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A7C4R5N7_9DELT)

HSP 1 Score: 80.5 bits (197), Expect = 1.740e-12
Identity = 85/240 (35.42%), Postives = 116/240 (48.33%), Query Frame = 1
Query:  133 LAIADDNTPGQAAGRCLFELRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGQNKVARELLAIGSVCAG 852
            L +    TPG+AA   L  L   G     F  RG  PT +++  A E AR  GA  +V++G G  IDTAKA +   ++ G    FL    G+     G  KP    G  LP VA+PT+AG+GA A    ++  P     V L        +A+VDP L   L    TAA  + AL+  ++A ++         PL   DAL    R GI   A  LPVA+ADG ++ ARE +A+ S+  G
Sbjct:   76 LFVVTGATPGRAA-FLLEALALRGCAVKAFAVRGE-PTLETVGVALEEARAWGAEALVAIGGGAVIDTAKAVSGWCTNPGDPLDFLE---GI-----GKGKPLERPG--LPWVAVPTTAGSGAEATRNAVIRVPARRAKVSLRSPHLLPRLAVVDPELTLELPPAVTAATGMDALAQLLEAFVS-----RRANPLT--DALC---REGIPRAARALPVAVADGSDRRAREAMALASLFGG 293          
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: A0A1V9Y4R8_9STRA (Fe-ADH domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y4R8_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.250e-12
Identity = 86/277 (31.05%), Postives = 126/277 (45.49%), Query Frame = 1
Query:  184 FELRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGN-ALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLD-LGRRGIGAVAEGLPVALADGQ---NKVA-RELLAIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFP---HVVGDMLSQ 987
            F L+KA I C MFT +    T DSI++AR+ ARR+GA  +V+ G G  +DT++A A L ++ G  +     P               P  N A PL+ +PT AG G+  +   LV     E  +   +        L+DPIL  S+    TA  ALTAL  C+++ L           +   DA +D +   G+   AE L   L DG+   N +A RE L++ S+ +   + AT       V    G L     +  VCA   P   H   D+L++
Sbjct:   86 FLLQKANIPCFMFTLQRDCATIDSINQARDHARRVGANGVVAFGGGNVMDTSRAIAALMANEGNAEDLSQGP--------------LPLPNRAAPLIIMPTVAGCGSEVSNEALVLDEGAEAKLTFTKTPIIAEAVLIDPILTVSVPMGLTAQGALTALGQCIESFL-----------MNVDDAKVDEICLNGVRTAAEALAGPLKDGKLHLNDLAFRERLSLASLYSSLASAATGFGAAHSVGIGVGGLSDT-PHLQVCAAFLPLVFHRYEDILTE 336          
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: UPI001FB2717E (iron-containing alcohol dehydrogenase n=1 Tax=Pseudodesulfovibrio tunisiensis TaxID=463192 RepID=UPI001FB2717E)

HSP 1 Score: 77.8 bits (190), Expect = 1.080e-11
Identity = 71/221 (32.13%), Postives = 105/221 (47.51%), Query Frame = 1
Query:  190 LRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGQNKVARELLAIGSVCAG 852
            L K G+   ++      P ++ ++EA  +AR      IV +G G TID+AKA A L ++SG    ++           G  K +TP   ALP+VAIPT+AG G  A+   ++     +  +    D    T+++VDP L  S+ K+QTA     A     +A L+     AS       DAL       +  +A  LP A+ADG N  AR ++A  S  AG
Sbjct:   57 LAKQGVASLVYDKIKPNPESEQVEEAAAIARENDVNFIVGLGGGSTIDSAKAIALLAANSGQYWDYMIE---------GTGKMKTPEHPALPIVAIPTTAGTGTEADPWTVISRTGSQEKIGWGNDSTFPTLSIVDPKLMLSVPKSQTAYTGFDAFCHAAEAYLSIRRQPAS-------DAL---SLEAVHLIANTLPEAVADGSNLEARTVMAWASTAAG 258          
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: UPI001D138907 (iron-containing alcohol dehydrogenase n=2 Tax=unclassified Arthrobacter TaxID=235627 RepID=UPI001D138907)

HSP 1 Score: 77.8 bits (190), Expect = 1.170e-11
Identity = 79/251 (31.47%), Postives = 117/251 (46.61%), Query Frame = 1
Query:  118 HGRTCLAIADDNTPGQAAGRCLF-ELRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGE-GGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSL--ASGTPLQNGDALL--DLGRRGIGAVAEGLPVALADGQNKVARELLAIGSVCAG 852
            HG   LA+ D   P     R L  ELR  G +  +++   A   A S+D A  MAR +    I++VG G T+D AK               L + GG L G  G N+ P    G  +P+VA+PT+AG G+      +V  PD  + V ++        A+VDP          TA   + AL   V++  A  L L  +S  P+  G  +    L  +GI  +   LPVA+AD +N+ ARE +++G++  G
Sbjct:   32 HGTRVLAVVDPFLPATKLFRTLLAELRGNGFDVTVYSDISAELPATSLDAAGTMARFLAPDAILAVGGGSTLDAAKLIG-----------LLAAHGGPLSGYYGENAVP----GPIVPIVAVPTTAGTGSEVTPVAVVSDPDLALKVGISSPFLIPVAAVVDPEFTFGAPAAVTAFSGIDALVHLVESFTAATLPLDWSSALPVFTGRNIFAETLALQGIATLGTWLPVAVADPENREAREQVSLGALLGG 267          
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: A0A6I6JIR1_9DELT (Iron-containing alcohol dehydrogenase n=1 Tax=Pseudodesulfovibrio cashew TaxID=2678688 RepID=A0A6I6JIR1_9DELT)

HSP 1 Score: 76.6 bits (187), Expect = 2.550e-11
Identity = 69/221 (31.22%), Postives = 104/221 (47.06%), Query Frame = 1
Query:  190 LRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGQNKVARELLAIGSVCAG 852
            L K  +   +F      P +D +DEA ++ R  G   +V +G G TID+AKA A + ++ G    ++ S      G GG   P     +ALPLVAIPT+AG G  A+   ++   D    +    D     +++VDP+L  S+   QTA   + A     +A LA        T  Q    +L L    +  +A  LP A+A+ +N  AR ++A  S  AG
Sbjct:   57 LAKQEVQTIVFDKIAPNPESDDVDEAAKICRETGVDFLVGLGGGSTIDSAKAIALMAANPGTYWDYMQS------GSGGGKMPER---DALPLVAIPTTAGTGTEADPWAVITRSDSAEKIGWGNDSTFPALSIVDPVLTISVPPRQTAYTGMDAFFHATEAYLA--------TCRQPASDMLAL--EAVHLIAHTLPEAVANPENLEARTVMAWASTAAG 258          
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: A0A841L4T5_9CLOT (Alcohol dehydrogenase n=1 Tax=Anaerosolibacter carboniphilus TaxID=1417629 RepID=A0A841L4T5_9CLOT)

HSP 1 Score: 76.3 bits (186), Expect = 2.900e-11
Identity = 65/221 (29.41%), Postives = 104/221 (47.06%), Query Frame = 1
Query:  187 ELRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGQNKVARELLAIGSVCA 849
            +L   GI   +F G    P  + +D+ R M        +V +G G  +D AKAAA L+  +    ++L            N +P    G  +P VAIPT+AG G+      +++HP+      LA  G     ++VDP+L  S++   TA   + AL+  V+          S T        + +  + I  +AEGLP+A+ DG +K+AR  +A+GS+ A
Sbjct:   53 DLEYYGIKHYVFDGIYGEPDTEMVDQVRRMIEEEKIDFVVGLGGGSALDVAKAAAGLYGQNLPTAEYL------------NQRPFEYQG--IPFVAIPTTAGTGSEITLNAVLYHPELGNKNSLAHPGFQSKCSIVDPVLTYSMAPEITAMTGMDALTHAVE----------SYTSKMANPVTMAMAGKAISLIAEGLPMAVKDGSDKMARSKMALGSMMA 249          
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Match: M1WUK9_PSEP2 (Fe-containing alcohol dehydrogenase n=1 Tax=Pseudodesulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30) TaxID=1322246 RepID=M1WUK9_PSEP2)

HSP 1 Score: 75.9 bits (185), Expect = 4.540e-11
Identity = 71/221 (32.13%), Postives = 107/221 (48.42%), Query Frame = 1
Query:  190 LRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDPILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLDLGRRGIGAVAEGLPVALADGQNKVARELLAIGSVCAG 852
            L K  +   +F      P +D IDEA  + R      I+ +G G TID+AKA A + +++G    ++ S      G GG  +P++   NALP+VAIPT+AG G  A+   ++        +    D    T+++VDP L  S+   QTA   + A    V+A LA        T  Q    +L L    +  +A  LP A+A+G+N  AR ++A  S  AG
Sbjct:   57 LSKQDVQSIVFDKIMPNPESDMIDEAAAICRENDIDFIIGLGGGSTIDSAKAIALMATNTGKYWDYMQS------GTGGGEEPQS---NALPIVAIPTTAGTGTEADPWTVITKSGSAEKIGWGNDSTFPTLSIVDPALMISVPPRQTAYTGMDAFFHAVEAYLA--------TCRQPASDMLAL--EAVHLIAHTLPEAVANGENLEARTVMAWASSAAG 258          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.725.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L9A2_9PHAE1.210e-27394.16Fe-ADH domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A1V9ZLN1_9STRA4.060e-1427.24Fe-ADH domain-containing protein n=1 Tax=Thraustot... [more]
A0A2R6GGT4_9EURY1.460e-1230.37Alcohol dehydrogenase n=3 Tax=unclassified Halobac... [more]
A0A7C4R5N7_9DELT1.740e-1235.42Iron-containing alcohol dehydrogenase n=1 Tax=Desu... [more]
A0A1V9Y4R8_9STRA3.250e-1231.05Fe-ADH domain-containing protein n=1 Tax=Achlya hy... [more]
UPI001FB2717E1.080e-1132.13iron-containing alcohol dehydrogenase n=1 Tax=Pseu... [more]
UPI001D1389071.170e-1131.47iron-containing alcohol dehydrogenase n=2 Tax=uncl... [more]
A0A6I6JIR1_9DELT2.550e-1131.22Iron-containing alcohol dehydrogenase n=1 Tax=Pseu... [more]
A0A841L4T5_9CLOT2.900e-1129.41Alcohol dehydrogenase n=1 Tax=Anaerosolibacter car... [more]
M1WUK9_PSEP24.540e-1132.13Fe-containing alcohol dehydrogenase n=1 Tax=Pseudo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:299493..304043 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score802.4
Seed ortholog evalue1.1e-229
Seed eggNOG ortholog2880.D7FKF1
Model size1665
Hectar predicted targeting categorymitochondrion
Exons7
EggNOG free text desc.hydroxyacid-oxoacid transhydrogenase activity
EggNOG OGsCOG1454@1,KOG3857@2759
Ec32 ortholog descriptionAlcohol dehydrogenase, iron-type
Ec32 orthologEc-12_002290.1
Cds size1287
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.725.1prot_Ecto-sp6_S_contig100.725.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig100 299493..303665 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348723.6747937-CDS-Ecto-sp6_S_contig100:299492..2995881682348723.6747937-CDS-Ecto-sp6_S_contig100:299492..299588Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 299493..299588 +
1682348723.6877873-CDS-Ecto-sp6_S_contig100:300265..3003671682348723.6877873-CDS-Ecto-sp6_S_contig100:300265..300367Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 300266..300367 +
1682348723.6977618-CDS-Ecto-sp6_S_contig100:301022..3011921682348723.6977618-CDS-Ecto-sp6_S_contig100:301022..301192Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 301023..301192 +
1682348723.7100306-CDS-Ecto-sp6_S_contig100:301550..3017641682348723.7100306-CDS-Ecto-sp6_S_contig100:301550..301764Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 301551..301764 +
1682348723.7175655-CDS-Ecto-sp6_S_contig100:302121..3024271682348723.7175655-CDS-Ecto-sp6_S_contig100:302121..302427Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 302122..302427 +
1682348723.72486-CDS-Ecto-sp6_S_contig100:302859..3030071682348723.72486-CDS-Ecto-sp6_S_contig100:302859..303007Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 302860..303007 +
1682348723.7322857-CDS-Ecto-sp6_S_contig100:303414..3036651682348723.7322857-CDS-Ecto-sp6_S_contig100:303414..303665Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 303415..303665 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348723.740554-UTR-Ecto-sp6_S_contig100:303665..3040431682348723.740554-UTR-Ecto-sp6_S_contig100:303665..304043Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig100 303666..304043 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig100.725.1

>prot_Ecto-sp6_S_contig100.725.1 ID=prot_Ecto-sp6_S_contig100.725.1|Name=mRNA_Ecto-sp6_S_contig100.725.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=429bp
MRCRLASIRRNLSSRLSPNPKLIVEAECSWTKVVAQVSRHGRTCLAIADD
NTPGQAAGRCLFELRKAGINCAMFTGRGAYPTADSIDEAREMARRIGATC
IVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEGGNSKPRTPA
GNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEDGESLTVALVDP
ILCTSLSKTQTAAMALTALSACVDALLAWELSLASGTPLQNGDALLDLGR
RGIGAVAEGLPVALADGQNKVARELLAIGSVCAGQLAVATPAPPTQLVAR
ATGSLLGRHSYPSVCAMVFPHVVGDMLSQASSFSGDAQAAEAIERALSIS
ASLFLGDGNDGQALMSWLEAQEHELLDFGSLSSVDSTITAKDVATNIDML
LAIEEDTDAADRVWSAGGTADMADLIVG*
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mRNA from alignment at Ecto-sp6_S_contig100:299493..304043+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.725.1 ID=mRNA_Ecto-sp6_S_contig100.725.1|Name=mRNA_Ecto-sp6_S_contig100.725.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4551bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:299493..304043+ (Ectocarpus species6 EcLAC_371)
ATGCGTTGTAGACTGGCCAGCATTAGGAGGAATTTGTCATCTCGCCTCAG CCCTAATCCAAAGCTAATTGTTGAGGCTGAGTGCTCTTGGACCAAGGTAA GTTCCCTCGTTCCGAATGTGTGACATGGACGGAAATGCAGGTGAAATCGA GGTTGGGCCGCGTTTTGGTGTGCAGATCAACGACCAAGCTATTGAGCTTC AGTGCAGTGCACTACATCAGTACATCTCGAGAGACGTATGAGCAGTGTGT ATGGACTCTTCTGCATGTGCACTGCTATCGACCTATGTCTTTGTCTTTCT GCCTGAGCAATTCTGTGTTGTTTTACGCTACGGCCTATAGCTTCCCCCTA CATCTACGGTACTGGCTATACGTTGTAGTGTAGGTCGAAGGTTCTGAGAG AGCCTACCCGCTTGCCTGGTTCGTCAAGTGCTCGTCAATAGGCAGGGTGC CAACAATCCGAGAGAAATGACTAGGACAGGCCTCGTCAAGAGCTTTGTCA AGTTGTGACCTGTCGGTATCGGGAATCCCGTCTCCCCTCTCTGTTGTGTT AAAGAATGGCTTTACATTAGACTACCTACGTGCAGTCAGCGCCCATGAAT AATGTTTTTAATCGTGCAGTAGTCTAATGGCTAAACCTTGTTTATCATGT TGGTGGTAACCCAGCCTCGCAAATCAATCGGCCGATAGCAATCACTGCCC CCACAGCAGCTATGACAGCTCGCCGGATCACCAATAAATCCCACCCACTG CCTTCGCTCCCTTCGGTTAGCAGGTTGTCGCGCAGGTATCAAGGCACGGA AGAACGTGCCTGGCAATCGCCGATGACAACACTCCAGGGCAAGCAGCCGG AAGATGCCTGTTCGAACTGCGAAAGGTGCGAAAACGGTTAGCCTAACAAT GGCAGCCTTGTTTGTGCGAAATGATGTGTGAGGGGTAGATGGCTTTTTCT CCATGAGCGGTGTTGCGAAAAGGTCTGCACTACGTCTCAACTCCCTACTC CCTCTGAAATGTTTTCCTGGCAAAGCTACAGGACGCATTTGATTTGTTGG GCTTGTAGTTTTCGGGGCGGCGTCCATCTTTCACTACTGCAAAAAGACCG ACAGGCATTTGTTTGTGTGTGTACTCGGCAGGATACAATTCTCCGAGATC TCCGAGGGGGTTACGCAGATGAGATAGATATGGGTATGATAGACAGACTT GGTGCAGCAGGCTTTGCCTCTTCTTGCTCACATCTGTCACTCGTTAAACT CTCTCTAATAATCAAGGAACTTGAGTCACTCCTTTGTGCAACACGCTCTC GACAAGAGCCCGCGAGCGTGATAACATAGTACACGCGCCGACACCCCAAA CAGCATTCATAGCCAGGGCTGTGCCCATGGGCGTCATGGCCTCCGCGACG GCTTGTGGGGCATGAGCTCCGAGAGGCAACGTTGCAAGCAGAGTTAGCTC TATGTGGCGTTCGCTTCGTTTCGCACGTCTTAGGCTAGACAATGTTTGCA TTGATGCTGCCTACACGTTGCCATCCGCAGGCTGGCATCAACTGCGCGAT GTTCACGGGTCGGGGCGCCTACCCTACCGCCGATAGCATAGACGAGGCAC GAGAGATGGCTAGGAGAATCGGGGCGACGTGCATCGTAAGCGTTGGGCGC GGGGGGACAATAGATACTGCCAAGGCCGCAGCAAGGCTGCACTCTAGCAG GTAGGCAGATGATAAAATATTGCTGTTCGGAGTGATTGAGATTGGGACAG CAGAAGCAGCTGCAGCGGGCGCTTAAATATTTCTCCCTCGCCACAAAATT GGCACCGTGTCAAACGATTGGTATGATACCTTCACTTGCTGTTACACGCT TGGACTTGTCGTTTTTCTCTCTCAGCTCTAGGCAGAATAAGGTCTTCGCT GCGGGTCGACTTCCCATAATGTACTGCCACAACCCGCTCAACCAACAGCT TATCACAACAATAACAGTGGGACGACACGACACTTCCGACATATTCACGT TTTTTTTATTCTCCAACTACTGTTCCGGGTTGGTCAAATCTCTTCCTTGT TCCTACAGCGGCGGGTGCAAGCAATTCTTGACGAGCCCCGGTGGCGTGCT CATGGGCGAGGGCGGTAACAGCAAGCCCCGAACACCTGCCGGAAACGCGT TGCCGCTTGTGGCGATACCGACCTCCGCTGGTGCAGGGGCCGCCGCGAAC GGGCGGTGTTTGGTTTGGCACCCGGATGACGAGGTGCTGGTGCCGCTGGC TGAGGATGGGGAGTCCCTGACGGTGAGCGTGGGGTATAAAGTTGTGCCGA CAGATCCAAGTTTTCTCTTGCGTAGGCAAACCATGCGCGAAAACACCACA ATGTTGACCTTGATGTTGTTTTGATACCTACCTCTTCGAGCGGCAGCATA CATGACGCAGAACTGGCTGTTTGCCTGTGCTGCGACGATCGAAAAGGCCC GCGGCTCAGCATATAGCACAACTGCAACGTGCAAACGGGATAGCCCTTTC CCGCAAAAAGTAGAATACTCCTCTCTCGCCGACACCCACCACGTCCTTTA GGTCATGCACCAAAAGTGACAAAGATGACGACTGCACACGCATCTATACG CGCTCGCATCACCGCCCGTACGCGCCCAGGTAGCTCTGGTGGACCCTATC CTCTGCACCTCACTGAGCAAGACGCAGACGGCGGCCATGGCGCTGACGGC GCTCTCCGCCTGCGTCGATGCCTTGCTAGCGTGGGAGTTGTCCCTGGCCT CTGGCACACCGCTGCAGAACGGCGACGCGCTCCTCGATCTCGGGAGGCGC GGCATCGGCGCGGTGGCAGAGGGCTTGCCGGTGGCCCTGGCGGACGGCCA GAACAAGGTGGCGAGAGAGCTGCTGGCGATCGGCAGCGTGTGTGCAGGAC AGCTCGCTGTCGCCACTCCGGCCCCACCAACTCAGGTACAGGCGCCGCTG AGACCTTCTTAAGTCGTCTGACAGTAAGAATACCCGAGGTTGAACCTGGT GTAGTGTGGCACGGCCCGCGGTGCAAACTCGCCATTGAGAAACCACGTTG GAGCGGTCATGCGAGATGAGGAAGTGGCGAGACGCGAGTTCTTTACCCCT GCAATGCGCGGTGCTAGGTGTGTGCCTGTAGACGCGGTACAATACCGCGA GGGCAAGGCACCTTGTGTGTGTTAAGACCTGCGGCTAGTTGTATTCTTGG AGCTCAAACAGGAGAGCTAGTTGCGAACCTGCTCCATTTCCGACTTCCCC GAAGGAGCTCAGCACGTTTGGTTGGGCAAGGAGCGTTGATTTTTGTTGAT TCGACTTAGCAACATAAGATTTTTCATCGATCGCCTCCCACCCCAACCGG CTTCCTCCGCTTCTCAGCTCGTGGCTCGAGCAACTGGTTCGTTGCTTGGG CGGCATAGTTACCCTTCAGTCTGCGCGATGGTCTTTCCCCATGTTGTCGG GGACATGCTGAGCCAGGCGAGCTCCTTCTCCGGAGATGCTCAAGCTGCGG AGGCCATCGAGCGAGGTGAGTCGCGAGCGAATATCCTTCCGAAGAGGCTC TCAGTTCTTGACCCTGAATATATATATAGTCTTTTTGCCCAATTTTATTT GCGTCTGCTTCAGGTGAGCCGTTGATTGTCGCGCCCTTGATCACCCTAGA GTAAGAGCGTTGAAGAACAGGCAGGTGAATCACAGCAAATGTTTGCTACA TCAGTAGTACCATTCTTCCTCGATCGGCCACGATTGGAATTTTCCCTGCT GTGCCTTGTCCTTGAGCGCCTTGCGCAAATCTCAACTAGATCTAGTTGGA AACCCCAAAAAAACTTGTAGCACTTTCGAGTGATCCCCCTGGAAAAAAGA CCCCGCACGATTGATACTGCACAAGCTTCGTTTCGCTTTTTGTTTTTTCT CCTGTCCCTTCTTATTTTATAGCTCTTTCGATATCGGCGAGCCTCTTTCT GGGAGATGGCAACGATGGCCAGGCGCTCATGTCTTGGCTAGAGGCGCAGG AGCACGAGTTGTTGGATTTCGGTAGCTTGTCTTCGGTGGACTCCACCATC ACGGCCAAGGACGTCGCGACCAACATCGATATGTTGCTGGCGATTGAAGA AGATACGGACGCGGCGGATAGAGTGTGGAGTGCGGGCGGTACCGCGGATA TGGCCGACCTTATCGTTGGCTGACGAATCTTTCAGAGAAATTTCTTCCAC TTGCAGTATTTTAGGGTATGAAAACGTGTCTTTCGTGCGTGTACAGGACA ATGAACGTGCGACTTTTGCCAACTCCCTGGACCATGAAAATTTGTGAACC TTCGAAGGGATGTGTAGACTGCAGCGGTAAGGTTGAAGCACCAAAGTCGA GTCAGGCCGTGGTGGATAAGCCGAAATCAAACCGTTAGATTAGTAAGCGC AGACTACGTACGTACGTAGTCTAATTGGTTTGATTTCGGCTTCTATTCAA TGTTTGGATGGATAGCAGCTCTGGCTAGGGCAGTCACCCTCCTCGGAAAG TGTCGGGGCATGCGAACCCACGACTGACTTTTTTAAATCCGAAATCAAAC C
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:299493..304043+

>mRNA_Ecto-sp6_S_contig100.725.1 ID=mRNA_Ecto-sp6_S_contig100.725.1|Name=mRNA_Ecto-sp6_S_contig100.725.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1287bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:299493..304043+ (Ectocarpus species6 EcLAC_371)
ATGCGTTGTAGACTGGCCAGCATTAGGAGGAATTTGTCATCTCGCCTCAG
CCCTAATCCAAAGCTAATTGTTGAGGCTGAGTGCTCTTGGACCAAGGTTG
TCGCGCAGGTATCAAGGCACGGAAGAACGTGCCTGGCAATCGCCGATGAC
AACACTCCAGGGCAAGCAGCCGGAAGATGCCTGTTCGAACTGCGAAAGGC
TGGCATCAACTGCGCGATGTTCACGGGTCGGGGCGCCTACCCTACCGCCG
ATAGCATAGACGAGGCACGAGAGATGGCTAGGAGAATCGGGGCGACGTGC
ATCGTAAGCGTTGGGCGCGGGGGGACAATAGATACTGCCAAGGCCGCAGC
AAGGCTGCACTCTAGCAGCGGCGGGTGCAAGCAATTCTTGACGAGCCCCG
GTGGCGTGCTCATGGGCGAGGGCGGTAACAGCAAGCCCCGAACACCTGCC
GGAAACGCGTTGCCGCTTGTGGCGATACCGACCTCCGCTGGTGCAGGGGC
CGCCGCGAACGGGCGGTGTTTGGTTTGGCACCCGGATGACGAGGTGCTGG
TGCCGCTGGCTGAGGATGGGGAGTCCCTGACGGTAGCTCTGGTGGACCCT
ATCCTCTGCACCTCACTGAGCAAGACGCAGACGGCGGCCATGGCGCTGAC
GGCGCTCTCCGCCTGCGTCGATGCCTTGCTAGCGTGGGAGTTGTCCCTGG
CCTCTGGCACACCGCTGCAGAACGGCGACGCGCTCCTCGATCTCGGGAGG
CGCGGCATCGGCGCGGTGGCAGAGGGCTTGCCGGTGGCCCTGGCGGACGG
CCAGAACAAGGTGGCGAGAGAGCTGCTGGCGATCGGCAGCGTGTGTGCAG
GACAGCTCGCTGTCGCCACTCCGGCCCCACCAACTCAGCTCGTGGCTCGA
GCAACTGGTTCGTTGCTTGGGCGGCATAGTTACCCTTCAGTCTGCGCGAT
GGTCTTTCCCCATGTTGTCGGGGACATGCTGAGCCAGGCGAGCTCCTTCT
CCGGAGATGCTCAAGCTGCGGAGGCCATCGAGCGAGCTCTTTCGATATCG
GCGAGCCTCTTTCTGGGAGATGGCAACGATGGCCAGGCGCTCATGTCTTG
GCTAGAGGCGCAGGAGCACGAGTTGTTGGATTTCGGTAGCTTGTCTTCGG
TGGACTCCACCATCACGGCCAAGGACGTCGCGACCAACATCGATATGTTG
CTGGCGATTGAAGAAGATACGGACGCGGCGGATAGAGTGTGGAGTGCGGG
CGGTACCGCGGATATGGCCGACCTTATCGTTGGCTGA
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