mRNA_Ecto-sp6_S_contig100.723.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig100.723.1
Unique NamemRNA_Ecto-sp6_S_contig100.723.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: D7FKF3_ECTSI (HSCB_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF3_ECTSI)

HSP 1 Score: 600 bits (1547), Expect = 1.750e-213
Identity = 305/315 (96.83%), Postives = 308/315 (97.78%), Query Frame = 2
Query:   32 MSLVRHLPSIGPAWRTLAGTRRYVDGELLPPQPLLQSSYAAFSRQPSIQHVLPSPPSRRSHSVLRRCVRPGGAPGTTIALNEHASRKRLLKGRRLSTQKTGDVNNNSNNCWKCGSEISWREHFCKCGVIQLLDERLDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHRLEDGLASPTAG 976
            MS VRHLPSI PAWRTLAGTRRYVDGELLPP+ LLQSSYAAFSRQPSIQHVLPSPPSRRSHSVLRRCVRPG APGT+IALNEHASRKRLL+GRRLSTQKTGDVNNNSNNCWKCG E SWREHFCKCGVIQLLDERLDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALE CSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHRLEDGLASPTAG
Sbjct:    1 MSFVRHLPSIRPAWRTLAGTRRYVDGELLPPKQLLQSSYAAFSRQPSIQHVLPSPPSRRSHSVLRRCVRPGDAPGTSIALNEHASRKRLLEGRRLSTQKTGDVNNNSNNCWKCGLETSWREHFCKCGVIQLLDERLDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEGCSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHRLEDGLASPTAG 315          
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: A0A7S2ST46_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST46_9STRA)

HSP 1 Score: 141 bits (355), Expect = 4.550e-35
Identity = 80/203 (39.41%), Postives = 116/203 (57.14%), Query Frame = 2
Query:  359 CWKCGSEISWREHFCKCGVIQLLDERLDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKA---GGGKDELSDAAVRLRYLYRIEDEARRVMHRLEDGL 958
            CWKCG ++   + FC C VIQ +D    YF++F+   ++ L  K++E +FK +QR  HPDLY   SE E+EISA NSA  N+AYQTL  P+ R+KYL+   G   L E+G    T      LME+ME R+ ++EC S      +L E  ++    LS +   +K     G ++ LS AA+RL+Y  +IE+ A     RL + +
Sbjct:   38 CWKCGKKLRCCQLFCPCSVIQPVDNACSYFDIFKLDAAIELNQKDLEAQFKALQRQLHPDLYTRNSEREQEISAQNSALVNRAYQTLRDPLERIKYLLEQQGILTLTEQG---GTISDPSLLMEIMEIRQQIDECVSP----VVLDELRLSNRTKLSTLLSEIKRHHQDGHREALSQAAIRLQYYAKIEESAEAASERLAEAI 233          
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: A0A836CIW0_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIW0_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.410e-30
Identity = 82/205 (40.00%), Postives = 120/205 (58.54%), Query Frame = 2
Query:  359 CWKCGSEISWREHFCKCGVIQLLDER-LDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLL-GSTALEEEGEDDRTSVPMD--FLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHRLEDGLA 961
            C  CG+ +S    FC+CG +Q L    + YFEL  C   V +  K VE RF  +Q+  HPDL+A KS++E+ ISAAN+A  N+AYQTL  P+ RV+Y+++L+ G    E     +R++ P D   LM V +TRE LE C+S++EA  +L +   +++  LS +   + A G    +     RL+YL +I +EA  V HRL D  A
Sbjct:   90 CGSCGAPVSKVGLFCECGRMQPLSHSAISYFELLDCPFGVIIDPKLVERRFWALQKQLHPDLHAVKSQEEQAISAANTAFVNQAYQTLRDPVKRVRYVLQLMKGQDEAEAAAHAERSATPPDPALLMFVYDTRERLERCASEQEARYVLRDAEQSMDAQLSELRGEV-AAGDVAAVERGLNRLQYLAKIAEEACSVEHRLADAAA 293          
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: A0A7S3Y1H3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1H3_HETAK)

HSP 1 Score: 121 bits (303), Expect = 1.080e-27
Identity = 71/197 (36.04%), Postives = 110/197 (55.84%), Query Frame = 2
Query:  359 CWKCGSEISWREHFCKCGVIQLLDERLDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHRLE 949
            CW+CG        FC CG +Q L    +YFE+ +C     + +K +E  +  +Q+  HPDLY ++ + E+E+SA NS+  N AYQTL  P+ RVKYL+ L G   L E+        PM FLM+VME RE +EE  +  + E ++     A+++ L  + + L  G    ++++ AV+L+Y  RI  EA + +  LE
Sbjct:   68 CWQCGLRDRCSGFFCDCGALQPLQNE-NYFEILKCPVHFDVDMKYLEQNYWKLQKQLHPDLYGTRHQIEQELSAQNSSQVNHAYQTLKDPVERVKYLLSLYGIEVLHEQSGTQEVD-PM-FLMQVMEMREEIEEAKTPHKIEQLMQTNHHAIDQTLRSI-KTLFDGKELTKIAEEAVKLQYYTRINAEACQKLDELE 260          
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: A0A485KZX6_9STRA (Aste57867_14105 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZX6_9STRA)

HSP 1 Score: 118 bits (296), Expect = 3.020e-27
Identity = 74/201 (36.82%), Postives = 104/201 (51.74%), Query Frame = 2
Query:  359 CWKCGSEISWREHFC-KCGVIQLLDER--LDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHRLED 952
            CWKCGSE    E FC KC  IQ L      +YF++F    S  +  K+VE  +  +Q+  HPDLY SKS+ E+E+S  NSA  N+AY  L  P +R  Y++ L G  AL E    + T V    LME+ME REA+EEC++ E      +E +  +  C+  + E L      +      V L+YL ++ D        LE+
Sbjct:   16 CWKCGSETGCCEFFCAKCSHIQPLQAEGACNYFKIFGIPESFEINAKKVEKLYWALQKKMHPDLYGSKSQTEKEMSIVNSALVNQAYNLLKAPTSRANYMLHLHGIDALGE----NSTFVDPAVLMEIMEAREAVEECTTVEGLIPHKTENAKQINRCIKQLTEALDTHEDFEASKKLTVELQYLVKLSDAILEKEEALEE 212          
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: A0A3M6VU17_9STRA (J domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VU17_9STRA)

HSP 1 Score: 119 bits (297), Expect = 5.110e-27
Identity = 73/192 (38.02%), Postives = 104/192 (54.17%), Query Frame = 2
Query:  356 NCWKCGSEISWREHFCK-CGVIQLLDERL--DYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDE 922
            NCWKC         FCK C  IQ + +    DYFE+FQ   +  L L+ +E  + N+Q+  HPDLY SKSE E+E+SA N+A  N AY+ L  P  RVKYL+ L G  AL   GE   T+V  + LM+ ME RE + E     E + I  E S  ++  ++ + EV       +   + AV+L+Y+ +  +E
Sbjct:   48 NCWKCHHVTDCCSFFCKTCNAIQPISKNCHCDYFEMFQIPKNFNLELRTIEKTYWNLQKRLHPDLYGSKSEFEKELSAVNAAVINDAYKMLKTPNTRVKYLLTLHGIDAL---GETASTAVDPELLMQTMEIRERIAEAPDVGELDKIRKEISDHIDAVINKLGEVYDRDEDLESTKEYAVQLQYMVKCVEE 236          
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: K3WYH3_GLOUD (J domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYH3_GLOUD)

HSP 1 Score: 118 bits (295), Expect = 7.270e-27
Identity = 72/200 (36.00%), Postives = 104/200 (52.00%), Query Frame = 2
Query:  359 CWKCGSEISWREHFCK-CGVIQLL--DERLDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHRLE 949
            CW C         FCK CG IQ L  D   DYFE+F+   +  L  +++E  + N+Q+  HPDLY SKSE E+E+SA N+A  N AY  L  P  RVKYL+ L G  AL   GE   T+V    LM+ ME RE ++E  + E  + +  + S  ++  ++ + +V       D     AV L+Y+ +  +E      +LE
Sbjct:   34 CWNCHHATDCCSFFCKSCGTIQPLNKDNHCDYFEMFKIPKNFTLEQRKIEQTYWNLQKRLHPDLYGSKSEFEKELSAVNAAVINDAYNMLKTPNTRVKYLLALHGIDAL---GESASTAVDPQLLMQTMEIREEIDEAETIEALDTLRKQISEQIDAIITKLGQVYDKQQDLDATKKYAVELQYMVKCAEEIDAKEEKLE 230          
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: A0A433U8R5_ELYCH (J domain-containing protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433U8R5_ELYCH)

HSP 1 Score: 117 bits (292), Expect = 7.080e-26
Identity = 68/200 (34.00%), Postives = 111/200 (55.50%), Query Frame = 2
Query:  350 SNNCWKCGSEISWREH--FCKCGVIQLLDERLDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHR 943
            S  CWKCGS+    +   FCKCGV+Q +   + YF L     +  L  K + + F+  Q+  HPD+++SKS++E++ +   S+  NKAYQTL++P++R  Y++RL   T  E+    D  S P DFLM++M   E ++E S   E  +I     VA+E C+  + +  K+   +D  S + ++LRY   I++    +  R
Sbjct:   97 SRTCWKCGSDTDPEKELFFCKCGVVQTIAPSITYFRLLDEEVTFDLDTKTLGVVFRKTQKLLHPDMFSSKSKEEQQFAEEQSSLLNKAYQTLLKPLSRAIYMLRLHNVTIDEK----DTISDP-DFLMDIMTFNEQIDEASCASEFNSIEETIGVAIEMCIKEISQAFKSCNIEDAKS-STIKLRYFTTIQERILNIRRR 290          
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: D0N1H2_PHYIT (J domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0N1H2_PHYIT)

HSP 1 Score: 115 bits (287), Expect = 1.320e-25
Identity = 70/191 (36.65%), Postives = 101/191 (52.88%), Query Frame = 2
Query:  359 CWKCGSEISWREHFCK-CGVIQLLDE--RLDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDE 922
            CWKC         FCK C  IQ +D+    DYFE+F+   +  L  + +E  + N+Q+  HPDLY SKSE E+E+SA N+A  N AY+ L +P  RVKYL+ L G  AL   GE   T+V  + LM+ ME RE + E    +    I  E S  ++  ++ + EV       +     AV L+Y+ +  +E
Sbjct:   49 CWKCHHATDCCSFFCKSCNAIQPIDKGCHCDYFEMFKVPKNFNLEQRSIEKTYWNLQKRLHPDLYGSKSEFEKELSAVNAAVINDAYKMLKKPNTRVKYLLALHGIDAL---GETASTAVDPELLMQTMEIRERIAEALDVDTLHEIRKEVSEHIDTIINKLGEVYDKDQDLESTKQYAVELQYMVKCAEE 236          
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Match: A0A5D6XKG7_9STRA (J domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKG7_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.380e-24
Identity = 72/204 (35.29%), Postives = 103/204 (50.49%), Query Frame = 2
Query:  347 NSNNCWKCGSEISWREHFCK-CGVIQLLDER--LDYFELFQCTPSVFLGLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARRVMHRLE 949
            N  +CWKC         FC+ C  IQ L+     DYFE+F+   +  L  +++E  + N+Q+  HPDLY SKSE E+E+SA N+A  N AY  L  P  RVKYL+ L G  AL   GE   T+V    LM  ME RE ++E  S E  + I    +  ++  +  + EV       D     A+ L+Y+ +  +E      +LE
Sbjct:   37 NEKDCWKCHHATECCALFCQSCDAIQPLNRENACDYFEMFKIPKNFSLEQRKIEQTYWNLQKRLHPDLYGSKSEFEKELSATNAAVVNDAYNMLKTPNTRVKYLLALHGIDAL---GESASTAVDPALLMRTMEIREEIDEAPSVEALDRIRKNIAAQIDAIIQKLGEVYDRKHDLDATKRFALELQYMVKCAEEIDLREEKLE 237          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.723.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKF3_ECTSI1.750e-21396.83HSCB_C domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S2ST46_9STRA4.550e-3539.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836CIW0_9STRA1.410e-3040.00J domain-containing protein n=1 Tax=Tribonema minu... [more]
A0A7S3Y1H3_HETAK1.080e-2736.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A485KZX6_9STRA3.020e-2736.82Aste57867_14105 protein n=1 Tax=Aphanomyces stella... [more]
A0A3M6VU17_9STRA5.110e-2738.02J domain-containing protein n=1 Tax=Peronospora ef... [more]
K3WYH3_GLOUD7.270e-2736.00J domain-containing protein n=1 Tax=Globisporangiu... [more]
A0A433U8R5_ELYCH7.080e-2634.00J domain-containing protein n=1 Tax=Elysia chlorot... [more]
D0N1H2_PHYIT1.320e-2536.65J domain-containing protein n=11 Tax=Phytophthora ... [more]
A0A5D6XKG7_9STRA1.380e-2435.29J domain-containing protein n=1 Tax=Pythium brassi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:292651..294851 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score605.9
Seed ortholog evalue1.1e-170
Seed eggNOG ortholog2880.D7FKF3
Preferred nameHSCB
Model size1457
KEGG rclassRC00074,RC00514
KEGG koko:K01489,ko:K04082,ko:K15151
KEGG ReactionR01878,R02485,R08221
KEGG Pathwayko00240,ko00983,ko01100,map00240,map00983,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0001671,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0006091,GO:0006790,GO:0008047,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016043,GO:0016226,GO:0022607,GO:0030234,GO:0030544,GO:0031072,GO:0031163,GO:0032781,GO:0042802,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043462,GO:0044085,GO:0044093,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0044571,GO:0045333,GO:0050790,GO:0051087,GO:0051186,GO:0051336,GO:0051345,GO:0055114,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0071840,GO:0098772
Exons3
EggNOG free text desc.protein maturation by iron-sulfur cluster transfer
EggNOG OGsCOG1076@1,KOG3192@2759
EC3.5.4.5
Cds size948
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03021,ko03029,ko03110
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348723.524996-UTR-Ecto-sp6_S_contig100:292650..2931281682348723.524996-UTR-Ecto-sp6_S_contig100:292650..293128Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig100 292651..293128 -
1682348723.5618637-UTR-Ecto-sp6_S_contig100:294820..2948511682348723.5618637-UTR-Ecto-sp6_S_contig100:294820..294851Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig100 294821..294851 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682348723.5350943-CDS-Ecto-sp6_S_contig100:293128..2934581682348723.5350943-CDS-Ecto-sp6_S_contig100:293128..293458Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 293129..293458 -
1682348723.543612-CDS-Ecto-sp6_S_contig100:293840..2939541682348723.543612-CDS-Ecto-sp6_S_contig100:293840..293954Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 293841..293954 -
1682348723.5529637-CDS-Ecto-sp6_S_contig100:294316..2948201682348723.5529637-CDS-Ecto-sp6_S_contig100:294316..294820Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig100 294317..294820 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.723.1prot_Ecto-sp6_S_contig100.723.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig100 293129..294820 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig100.723.1

>prot_Ecto-sp6_S_contig100.723.1 ID=prot_Ecto-sp6_S_contig100.723.1|Name=mRNA_Ecto-sp6_S_contig100.723.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=316bp
MSLVRHLPSIGPAWRTLAGTRRYVDGELLPPQPLLQSSYAAFSRQPSIQH
VLPSPPSRRSHSVLRRCVRPGGAPGTTIALNEHASRKRLLKGRRLSTQKT
GDVNNNSNNCWKCGSEISWREHFCKCGVIQLLDERLDYFELFQCTPSVFL
GLKEVEMRFKNMQRAFHPDLYASKSEDEREISAANSATANKAYQTLVQPM
ARVKYLMRLLGSTALEEEGEDDRTSVPMDFLMEVMETREALEECSSKEEA
EAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEARR
VMHRLEDGLASPTAG*
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mRNA from alignment at Ecto-sp6_S_contig100:292651..294851-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.723.1 ID=mRNA_Ecto-sp6_S_contig100.723.1|Name=mRNA_Ecto-sp6_S_contig100.723.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2201bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:292651..294851- (Ectocarpus species6 EcLAC_371)
GTTGGCGCAGAGGGCGGTGCGGCACACAACCATGTCTCTCGTACGCCACC TTCCATCGATAGGGCCTGCCTGGCGTACGCTTGCAGGGACGCGTCGTTAC GTGGATGGCGAATTGCTGCCGCCACAACCACTGCTGCAATCGAGTTACGC CGCATTCTCCAGGCAGCCTTCGATACAGCACGTGCTTCCGTCTCCTCCGT CAAGAAGATCGCACTCCGTGCTTCGGCGTTGCGTACGACCTGGTGGTGCT CCTGGTACGACTATCGCTTTAAACGAACACGCGTCTCGCAAGCGCCTACT CAAGGGACGACGTCTTTCTACCCAAAAGACAGGTGACGTCAACAACAACA GCAACAACTGCTGGAAGTGCGGCTCGGAGATAAGCTGGCGAGAGCACTTC TGCAAATGCGGCGTGATCCAGCTCCTAGATGAGCGGCTGGACTACTTCGA GTTGTTCCAGTGCACTCCGTCTGTGTTCTTGGGGCTCAAGGAAGTCGAAA TGCGGTTCAAGAACATGCAACGCGCTTTCCATCCGGTGAGCACACCTGCT GAGTACTTGTTACAGCAACGCCTGCCGCAGCTCATCCTTTTGCGACCGCA GCAGGCAGTCGCTTCTGATGTCATCGTTCTATAGGTTCACATTTACTCAC GTAGAAGCCATGTGCATTGTTGTGTATGTAACCTGCCAAATCACATAATA TGCCGAAGTCCAAACGGTTGTACGTTTGTGAGTGAACGGCTCTCCGCTGG GTGTCTTGTGTGGCGAGGGCAGCTGGCGTCGGGGTGTGCGCGTGTTTTGC CTCAGGGGTTGAAGAAGTTGAAGGTGGTTGAGCTAAGGCACCAACATTTT CTTTGGGCGTGCCTTATCTGCGTTTTGATCCTTGGCGGATTTTTCAGGAC CTTTACGCCAGCAAGAGCGAAGATGAGCGAGAAATATCGGCTGCGAACTC AGCGACGGCGAACAAGGCGTACCAGACTCTTGTGCAACCTATGGCGCGCG TCAAGTATCTGGTAAGGCCTCCGATCAATCTGATCGAAGTCGGATCACGC ACATGCTGTAGTGGTGAAAACGACTACAGATCAGTACGCCCATGTTTGGT TTGTACGTCAAGCTGGATGTCCACTTTTGAACTAAATAGGTGTTCTCACA ACAGAACTGGTTTCAGCCTGGCGCATTCGCGGGCCATGCTGTTGCACTGC TGTCTGGCGCTCACCACAACAACCGTCCACATTTTACCACGCGTACAGCC GCAGCTGCGAAGTATTGTCGGCCTCACGGACCCTGTTCACAAATCCCGAA GGCCATGGGTAAGTAGGGTGCCAACAGGAACATATCTATCGACAAGAGTC GACCAGGGCTAATATTACGCGGTCTTGGGCATCCCTCCCGCAGATGCGTC TACTGGGATCGACAGCGCTGGAAGAAGAGGGGGAAGACGACAGGACGTCT GTCCCTATGGACTTCTTGATGGAGGTGATGGAGACGAGGGAAGCCTTGGA GGAGTGTTCGTCCAAGGAAGAAGCGGAGGCTATTTTGTCCGAAACAAGCG TAGCGGTCGAAGAGTGCTTGAGCGGTATGGACGAGGTGTTGAAAGCGGGC GGCGGCAAGGACGAGCTCTCCGACGCGGCAGTTCGGCTGAGATATCTCTA CCGCATCGAGGACGAGGCTCGGCGCGTCATGCATAGGCTAGAGGACGGCC TTGCAAGTCCAACAGCCGGGTAAACGATGTACCTGGCTCTCTGTTGAACG AAACGGGGCATGCAGAGGGACTGTCTGCGTAGGCACATCGTGTGTACGCA ATTTGTTAGAGAGAACGAGAAAACCCTGCTTGGGAGAAAAGTCTCCCAAC ACCCGGTACGCTGTTGTTTTTCAGGAGGCCGTTGTGAACAGTCACGCACT GGGGGCAGTCTTGAACAATGCGCAACCAAGTGTGCACAAATAAGCGTTCA TGGGCAAGAAGTCGGCGCTAAGAACAAGCACGCGTGCTGACCGACCAACA CGTAGGTTGGCCGAGTAGCGTTTCAGGTGCTCTCGGCATGGCACGCGTTT TCCCGTCAATCTTGCCATTCCGGTTGGTGCTGGCAATTGAGGGCGCCAAA CGTAAGAATAAAAACATCAATACGATGACATCAACGGCCGCGCTAATACC ACGGATACACAAAAAGCTTGGAGCGGAGGCTCTTTGTAGACGATATTCGC C
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:292651..294851-

>mRNA_Ecto-sp6_S_contig100.723.1 ID=mRNA_Ecto-sp6_S_contig100.723.1|Name=mRNA_Ecto-sp6_S_contig100.723.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=948bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:292651..294851- (Ectocarpus species6 EcLAC_371)
ATGTCTCTCGTACGCCACCTTCCATCGATAGGGCCTGCCTGGCGTACGCT
TGCAGGGACGCGTCGTTACGTGGATGGCGAATTGCTGCCGCCACAACCAC
TGCTGCAATCGAGTTACGCCGCATTCTCCAGGCAGCCTTCGATACAGCAC
GTGCTTCCGTCTCCTCCGTCAAGAAGATCGCACTCCGTGCTTCGGCGTTG
CGTACGACCTGGTGGTGCTCCTGGTACGACTATCGCTTTAAACGAACACG
CGTCTCGCAAGCGCCTACTCAAGGGACGACGTCTTTCTACCCAAAAGACA
GGTGACGTCAACAACAACAGCAACAACTGCTGGAAGTGCGGCTCGGAGAT
AAGCTGGCGAGAGCACTTCTGCAAATGCGGCGTGATCCAGCTCCTAGATG
AGCGGCTGGACTACTTCGAGTTGTTCCAGTGCACTCCGTCTGTGTTCTTG
GGGCTCAAGGAAGTCGAAATGCGGTTCAAGAACATGCAACGCGCTTTCCA
TCCGGACCTTTACGCCAGCAAGAGCGAAGATGAGCGAGAAATATCGGCTG
CGAACTCAGCGACGGCGAACAAGGCGTACCAGACTCTTGTGCAACCTATG
GCGCGCGTCAAGTATCTGATGCGTCTACTGGGATCGACAGCGCTGGAAGA
AGAGGGGGAAGACGACAGGACGTCTGTCCCTATGGACTTCTTGATGGAGG
TGATGGAGACGAGGGAAGCCTTGGAGGAGTGTTCGTCCAAGGAAGAAGCG
GAGGCTATTTTGTCCGAAACAAGCGTAGCGGTCGAAGAGTGCTTGAGCGG
TATGGACGAGGTGTTGAAAGCGGGCGGCGGCAAGGACGAGCTCTCCGACG
CGGCAGTTCGGCTGAGATATCTCTACCGCATCGAGGACGAGGCTCGGCGC
GTCATGCATAGGCTAGAGGACGGCCTTGCAAGTCCAACAGCCGGGTAA
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