Homology
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match:
D7FKG7_ECTSI (Inorganic diphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG7_ECTSI)
HSP 1 Score: 409 bits (1052), Expect = 4.970e-141
Identity = 211/332 (63.55%), Postives = 213/332 (64.16%), Query Frame = 1
Query: 1 GGKEISPWHDIPLKAGADTFNYVCEIPKYSLAKMEIATKEPNNPIAQVGAA*RVACGLVWCTGVSHARKALRVEATAVRCRVVEARLRQNREPSQRRCKGSMAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYDTRTAFFAPPPFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWIK 996
GGKEISPWHDIPLKAGADTFNY+CEIPKYSLAKMEIATKEPNNPIAQ DTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGS+KLASG VKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWIK
Sbjct: 75 GGKEISPWHDIPLKAGADTFNYICEIPKYSLAKMEIATKEPNNPIAQ----------------------------------------------------------------------------------------------------------------------DTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSAKLASGTVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWIK 288
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match:
A0A6H5KSZ1_9PHAE (Inorganic diphosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ1_9PHAE)
HSP 1 Score: 362 bits (929), Expect = 7.720e-121
Identity = 167/171 (97.66%), Postives = 169/171 (98.83%), Query Frame = 1
Query: 484 PFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWIK 996
P QDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGS+KLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPG+VSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWIK
Sbjct: 220 PIAQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSAKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGHVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWIK 390
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match:
A0A836CKW0_9STRA (Inorganic diphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKW0_9STRA)
HSP 1 Score: 312 bits (799), Expect = 1.070e-102
Identity = 160/329 (48.63%), Postives = 182/329 (55.32%), Query Frame = 1
Query: 4 GKEISPWHDIPLKAGADTFNYVCEIPKYSLAKMEIATKEPNNPIAQVGAA*RVACGLVWCTGVSHARKALRVEATAVRCRVVEARLRQNREPSQRRCKGSMAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYDTRTAFFAPPPFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMW 990
GK+ISPWHDIPLK + +N+VCEIPK++ AKMEIATKEP+NPIAQ D KKG LRFYHGPIFWNYGY+PQTWEDP VKHPELGV+GDGDPVDVVEIGS+KL G++K ++ LGCLAMIDDGELDWKVI I DDPLA L+DI DVE+ PG VSGIREWFRWYKTPDDKP+N FGF E+AL+ +ET +I ECNGHWKALV GKTE GK+W
Sbjct: 71 GKDISPWHDIPLKGEGELYNFVCEIPKFTKAKMEIATKEPHNPIAQ----------------------------------------------------------------------------------------------------------------------DIKKGALRFYHGPIFWNYGYLPQTWEDPNVKHPELGVMGDGDPVDVVEIGSTKLPQGSLKQVRALGCLAMIDDGELDWKVIAIAKDDPLAAKLHDIKDVEEHCPGVVSGIREWFRWYKTPDDKPVNEFGFGERALDAKETADIISECNGHWKALVAGKTEKGKLW 281
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match:
H6WB91_VAULI (Inorganic diphosphatase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB91_VAULI)
HSP 1 Score: 295 bits (754), Expect = 7.000e-96
Identity = 156/329 (47.42%), Postives = 174/329 (52.89%), Query Frame = 1
Query: 4 GKEISPWHDIPLKAGADTFNYVCEIPKYSLAKMEIATKEPNNPIAQVGAA*RVACGLVWCTGVSHARKALRVEATAVRCRVVEARLRQNREPSQRRCKGSMAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYDTRTAFFAPPPFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMW 990
GKEISPWHDIPLKAG + +N+VCEIPK + AKMEIATKE NPIAQ D KKG LRFYHGPIFWNYGY+PQTWEDP+V+HPEL V+GDGDPVDVVEIGS K + G + IKPLGCLAMIDDGELDWKVI I DPL +LNDI DVE PG VSGIREWFRWYKTPDDKP+N FGF +ALN +ET VI ECN HWK+L+ G ++ GKMW
Sbjct: 71 GKEISPWHDIPLKAGDELYNFVCEIPKNTKAKMEIATKEELNPIAQ----------------------------------------------------------------------------------------------------------------------DIKKGNLRFYHGPIFWNYGYLPQTWEDPSVEHPELSVMGDGDPVDVVEIGSKKRSEGELCQIKPLGCLAMIDDGELDWKVIAIAKGDPLFDELNDIEDVEANCPGVVSGIREWFRWYKTPDDKPVNEFGFGGRALNAKETKLVISECNEHWKSLIAGNSDKGKMW 281
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match:
W7TQS0_9STRA (Inorganic diphosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQS0_9STRA)
HSP 1 Score: 283 bits (723), Expect = 3.790e-91
Identity = 151/331 (45.62%), Postives = 173/331 (52.27%), Query Frame = 1
Query: 4 GKEISPWHDIPLKAGADTFNYVCEIPKYSLAKMEIATKEPNNPIAQVGAA*RVACGLVWCTGVSHARKALRVEATAVRCRVVEARLRQNREPSQRRCKGSMAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYDTRTAFFAPPPFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWIK 996
G ISPWHDIPLKA TFN++ EIPK++ AKME+ATKE NPI+Q D KKGKLRFYHGPIFWNYG +PQTWEDP HPEL V GD DPVDVVEIGS+ L+ GAV +KPLG LAMIDDGELDWK+I I DP+A +LNDIADVE LPG VSGIREWFRWYKTPD KP+N FGF EKAL K + +KVIDE +G WK+L+ G+T+AGK+W K
Sbjct: 73 GNTISPWHDIPLKADPQTFNFITEIPKFTKAKMEVATKEELNPISQ----------------------------------------------------------------------------------------------------------------------DMKKGKLRFYHGPIFWNYGLLPQTWEDPNHTHPELKVQGDNDPVDVVEIGSTVLSMGAVTPVKPLGVLAMIDDGELDWKIIAIAASDPMAGELNDIADVEAKLPGVVSGIREWFRWYKTPDGKPVNEFGFGEKALAKADALKVIDETHGAWKSLMSGQTDAGKLWKK 285
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match:
A0A7S1UHB8_9STRA (Inorganic diphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHB8_9STRA)
HSP 1 Score: 279 bits (714), Expect = 4.350e-90
Identity = 145/329 (44.07%), Postives = 174/329 (52.89%), Query Frame = 1
Query: 7 KEISPWHDIPLKAGADTFNYVCEIPKYSLAKMEIATKEPNNPIAQVGAA*RVACGLVWCTGVSHARKALRVEATAVRCRVVEARLRQNREPSQRRCKGSMAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYDTRTAFFAPPPFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWI 993
K ISPWHDIPL+AG +N V EIPKY+ AKME+ATKE NNPIAQ D KKGKLR YHGPIFWNYG +PQTWEDP ++HPEL V GD DP+DVVE+GS+ L G+V A+KP+G LAMIDDGELDWK+I I+ DP+A +++D++D+E +PG VSGIREWFRWYKTPDDKPLN FGFDEK L K + +KVI+E N WKAL +GK EAGK+W+
Sbjct: 54 KTISPWHDIPLEAGDGCYNMVTEIPKYTKAKMEVATKEENNPIAQ----------------------------------------------------------------------------------------------------------------------DMKKGKLRDYHGPIFWNYGCLPQTWEDPNIEHPELKVSGDDDPLDVVEVGSASLEMGSVTAVKPIGVLAMIDDGELDWKLIAINKADPMAAEIDDVSDLEAKMPGVVSGIREWFRWYKTPDDKPLNGFGFDEKCLPKADAIKVIEETNEQWKALKEGKVEAGKLWL 264
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match:
A0A7S1UHT4_9STRA (Inorganic diphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHT4_9STRA)
HSP 1 Score: 279 bits (714), Expect = 1.900e-89
Identity = 145/329 (44.07%), Postives = 174/329 (52.89%), Query Frame = 1
Query: 7 KEISPWHDIPLKAGADTFNYVCEIPKYSLAKMEIATKEPNNPIAQVGAA*RVACGLVWCTGVSHARKALRVEATAVRCRVVEARLRQNREPSQRRCKGSMAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYDTRTAFFAPPPFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWI 993
K ISPWHDIPL+AG +N V EIPKY+ AKME+ATKE NNPIAQ D KKGKLR YHGPIFWNYG +PQTWEDP ++HPEL V GD DP+DVVE+GS+ L G+V A+KP+G LAMIDDGELDWK+I I+ DP+A +++D++D+E +PG VSGIREWFRWYKTPDDKPLN FGFDEK L K + +KVI+E N WKAL +GK EAGK+W+
Sbjct: 99 KTISPWHDIPLEAGDGCYNMVTEIPKYTKAKMEVATKEENNPIAQ----------------------------------------------------------------------------------------------------------------------DMKKGKLRDYHGPIFWNYGCLPQTWEDPNIEHPELKVSGDDDPLDVVEVGSASLEMGSVTAVKPIGVLAMIDDGELDWKLIAINKADPMAAEIDDVSDLEAKMPGVVSGIREWFRWYKTPDDKPLNGFGFDEKCLPKADAIKVIEETNEQWKALKEGKVEAGKLWL 309
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match:
A0A7S2VZ53_9STRA (Inorganic diphosphatase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZ53_9STRA)
HSP 1 Score: 270 bits (690), Expect = 2.750e-86
Identity = 146/331 (44.11%), Postives = 170/331 (51.36%), Query Frame = 1
Query: 1 GGKEISPWHDIPLKAGADTFNYVCEIPKYSLAKMEIATKEPNNPIAQVGAA*RVACGLVWCTGVSHARKALRVEATAVRCRVVEARLRQNREPSQRRCKGSMAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYDTRTAFFAPPPFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWI 993
G ISPWHDIPLK+ + +N V EIPK + AKME+ATKE NNPIAQ D KKG LR YHGPIFWNYG +PQTWEDP +HPEL V GD DP+DVVEIGS+ LA G+VK +KPLG +AMIDDGELDWKV+ + VDDPLA++ NDI DV + G+REWFRWYKTPDDKPLN FGFDEK LNK+ET++VIDE + W+ L DGKTEAGK+WI
Sbjct: 67 GDNVISPWHDIPLKSESGAYNMVVEIPKMTKAKMEVATKEENNPIAQ----------------------------------------------------------------------------------------------------------------------DIKKGNLRDYHGPIFWNYGCLPQTWEDPNAEHPELKVFGDDDPIDVVEIGSATLAMGSVKEVKPLGVIAMIDDGELDWKVLAVAVDDPLAEEYNDIDDVPDAVK---DGVREWFRWYKTPDDKPLNGFGFDEKFLNKKETIEVIDETHEAWQKLKDGKTEAGKLWI 276
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match:
A0A8J2SRR3_9STRA (Inorganic diphosphatase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRR3_9STRA)
HSP 1 Score: 271 bits (692), Expect = 9.410e-85
Identity = 123/169 (72.78%), Postives = 136/169 (80.47%), Query Frame = 1
Query: 484 PFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMW 990
P QDTKKGKLRFYHGPIFWNYG +PQTWE+P KHPELG GD DP+DVVEIGSS L +G+V +KPLG LAMIDDGELDWKVI + DPLA LNDI DVEK PGYVSGIREWFRWYKTPDDKPLNAFGFDE AL K +T++VI E + WK L DG +AGK+W
Sbjct: 242 PIMQDTKKGKLRFYHGPIFWNYGCLPQTWENPNEKHPELGCFGDDDPIDVVEIGSSALEAGSVTPVKPLGVLAMIDDGELDWKVIAVATSDPLASKLNDIDDVEKECPGYVSGIREWFRWYKTPDDKPLNAFGFDEAALPKAKTVEVIAETHAAWKGLRDGSIDAGKLW 410
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Match:
A0A7S2YMF8_9STRA (Inorganic diphosphatase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMF8_9STRA)
HSP 1 Score: 266 bits (679), Expect = 1.070e-84
Identity = 145/329 (44.07%), Postives = 166/329 (50.46%), Query Frame = 1
Query: 7 KEISPWHDIPLKAGADTFNYVCEIPKYSLAKMEIATKEPNNPIAQVGAA*RVACGLVWCTGVSHARKALRVEATAVRCRVVEARLRQNREPSQRRCKGSMAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSYDTRTAFFAPPPFFQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSSKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWI 993
K ISPWHDI LK ++N V EIPK + AKME+ATKE NNPIAQ D KKGKLR YHGPIFWNYG +PQTWEDPTVKHPELG GD DP+DVVEIGS+ L+ G++K +KPLG LAMIDDGELDWKV+ I DDPLA++ NDI DV + G+REWFRWYKTPDDKP+N FGFDEK L+K E +KVIDE N W L G+TEAGK+WI
Sbjct: 64 KPISPWHDIALKNDDGSYNMVVEIPKMTKAKMEVATKEENNPIAQ----------------------------------------------------------------------------------------------------------------------DMKKGKLRDYHGPIFWNYGCLPQTWEDPTVKHPELGCFGDDDPIDVVEIGSASLSMGSIKPVKPLGVLAMIDDGELDWKVLAIATDDPLAEEWNDIDDVPAAIK---DGVREWFRWYKTPDDKPINEFGFDEKYLDKAEALKVIDETNEAWAKLKSGETEAGKLWI 271
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.709.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 4.97e-141 / Id = 63.55 Expect = 7.72e-121 / Id = 97.66 Expect = 1.07e-102 / Id = 48.63 Expect = 7.00e-96 / Id = 47.42 Expect = 3.79e-91 / Id = 45.62 Expect = 4.35e-90 / Id = 44.07 Expect = 1.90e-89 / Id = 44.07 Expect = 2.75e-86 / Id = 44.11 Expect = 9.41e-85 / Id = 72.78 Expect = 1.07e-84 / Id = 44.07 Sequence D7FKG7_ECTSI A0A6H5KSZ1_9PHAE A0A836CKW0_9STRA H6WB91_VAULI W7TQS0_9STRA A0A7S1UHB8_9STRA A0A7S1UHT4_9STRA A0A7S2VZ53_9STRA A0A8J2SRR3_9STRA A0A7S2YMF8_9STRA Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 364.8 Seed ortholog evalue 3e-98 Seed eggNOG ortholog 2880.D7FKG7 Model size 1015 KEGG ko ko:K01507 KEGG Pathway ko00190,map00190 Hectar predicted targeting category mitochondrion GOs GO:0003674,GO:0003824,GO:0004427,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006950,GO:0006952,GO:0006970,GO:0008150,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009651,GO:0009941,GO:0010035,GO:0010038,GO:0010876,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019915,GO:0031967,GO:0031975,GO:0033036,GO:0042221,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0050896,GO:0051179,GO:0051235,GO:0051704,GO:0051707,GO:0065007,GO:0065008,GO:0098542 Exons 6 EggNOG free text desc. inorganic diphosphatase activity EggNOG OGs COG0221@1,KOG1626@2759 EC 3.6.1.1 Cds size 696 COG Functional cat. C Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01000
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348722.253325-UTR-Ecto-sp6_S_contig100:189237..189253 1682348722.253325-UTR-Ecto-sp6_S_contig100:189237..189253 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig100 189238..189253 - 1682348722.3100767-UTR-Ecto-sp6_S_contig100:191809..192026 1682348722.3100767-UTR-Ecto-sp6_S_contig100:191809..192026 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig100 191810..192026 - 1682348722.3193603-UTR-Ecto-sp6_S_contig100:192305..192391 1682348722.3193603-UTR-Ecto-sp6_S_contig100:192305..192391 Ectocarpus species6 EcLAC_371 UTR Ecto-sp6_S_contig100 192306..192391 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682348722.2682526-CDS-Ecto-sp6_S_contig100:189253..189346 1682348722.2682526-CDS-Ecto-sp6_S_contig100:189253..189346 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 189254..189346 - 1682348722.2765954-CDS-Ecto-sp6_S_contig100:189821..189995 1682348722.2765954-CDS-Ecto-sp6_S_contig100:189821..189995 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 189822..189995 - 1682348722.284537-CDS-Ecto-sp6_S_contig100:190407..190474 1682348722.284537-CDS-Ecto-sp6_S_contig100:190407..190474 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 190408..190474 - 1682348722.292461-CDS-Ecto-sp6_S_contig100:190969..191037 1682348722.292461-CDS-Ecto-sp6_S_contig100:190969..191037 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 190970..191037 - 1682348722.3011081-CDS-Ecto-sp6_S_contig100:191515..191809 1682348722.3011081-CDS-Ecto-sp6_S_contig100:191515..191809 Ectocarpus species6 EcLAC_371 CDS Ecto-sp6_S_contig100 191516..191809 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig100.709.1
>prot_Ecto-sp6_S_contig100.709.1 ID=prot_Ecto-sp6_S_contig100.709.1|Name=mRNA_Ecto-sp6_S_contig100.709.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=232bp
MAAAHRHFRYLASSTRLGVGIKRRPSFRVDFSRRCSCRLANFRPALVPSY back to top mRNA from alignment at Ecto-sp6_S_contig100:189238..192391-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig100.709.1 ID=mRNA_Ecto-sp6_S_contig100.709.1|Name=mRNA_Ecto-sp6_S_contig100.709.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3154bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:189238..192391- (Ectocarpus species6 EcLAC_371)GGCGGGAAGGAGATCTCCCCCTGGCACGACATCCCGCTCAAGGCCGGCGC
GGACACTTTCAACTACGTTTGCGAGATCCCCAAGTA GTGAGTCCGAAAAC
GCATCGTTTGCTGCTGTCGTGGAAGTGTGTAGCACGTTCGCTGTTGGTTG
TTCTCGCGTAGTTCAGCAAGACTCAATTTGCTTGCGTTGTGTGCGATCTG
CGTGCGTGCTCTTGCAGGTTTCGCTGGGGCTGGGGTTGGTTCTGGTTAAC
CAGGTCGAGGGAATGGGCTCGCGTGGTATCAGTCATATCTAGCTTGTGCC
CGCACGCCAATGTGTTGACCGCATCGTGTTTGCTTCGCCGTCTACGTTAC
TTGCTGTGTGCCTAGCTCGTTGGCGAAGATGGAGATCGCCACCAAGGAGC
CGAACAACCCCATCGCCCAGGTAGGTGCAGCATGACGTGTGGCATGTGGC
TTGGTCTGGTGCACAGGAGTAAGCCACGCAAGAAAAGCATTGCGTGTCGA
GGCCACAGCAGTGCGCTGCCGTGTGGTGGAAGCTCGCCTCCGGCAAAACA
GAGAGCCATCGCAGCGTCGCTGCAAAGGCTCG ATGGCGGCAGCACACCGC
CATTTTCGCTATCTCGCATCATCCACGAGGCTTGGCGTTGGAATAAAGCG
GAGGCCTTCGTTTCGTGTTGATTTTTCACGGCGATGTTCTTGCCGCTTGG
CTAACTTCCGGCCGGCCCTAGTGCCGTCATACGACACGCGCACGGCCTTT
TTCGCCCCCCCGCCTTTTTTTCAGGACACTAAGAAGGGCAAGCTGAGGTT
TTACCACGGCCCAATTTTCTGGAACTACGGGTACATCCCCCAAACATGGG
AGGACCCCACGGTGAAGCACCCTGAG GTTAGTTAGTGCTCACACCTCGGC
CGGTGCAACTCAGCTTTGAAAGCGAAAGGAAGGGCGCATGGGAAGCACTG
AATCCTTCGCTAGGCAAGGACCAGTGTCGAAAGGCATTCGCTGAGGTTCT
TGGGTCATGCATGCGATCAACAGCGAGTTGTTTTTGAGCCCGGGCAACTG
CGGTTGGTATTCGAATGGGATTATTGCTTACTTGCAGCCAGCTCCGCACG
GTCACCATGAAGGCAGAAGTCCCGGTGTAGCATGCCTAACAGGCGCTCTC
GATGAGCGTTGCCTTGCGAGGCACTTTGCTCAATCTTGAGCACCGATTTC
ACGGCTCACTCAAGGTGCTTGCTTCCATTCAAACACCCGACCCCTCGCCT
TCCCCCCCCCTTGTCGTATGATTCGGTTCGAAACCTTCGTCGGCGCTGGC
CTTCGTGTGTCGCTTCTTCGCCCCCCCCCTCCTTGACAAACGGACAACTT
TCAGCTCGGTGTTCTCGGGGACGGTGACCCGGTGGATGTCGTGGAGATCG
GGTCCTCGAAGCTTGCCTCTGG GTGAGTGATCTGAACAATCCCGCCGCGT
TGCTGTTAGGCCCCCTTGTTTTTTTCGAACCAAAATACGTGTTTTGTGTT
TTGTACTTGCCCCGTCACGTTGGGTTTGGGGCCTCTGTTTTTTTCCGGAC
CAAAAGAATGCTCTCTGCGCATGTGTGTGGGATGCCAGACTCCCGGAGAC
TCAATACCCAAACGTAGGCCGTCTCTGACAACGGGTCAGGCGTGGGACAA
ACCTATAAAGGAAATGGTCTGCGTGGGGCTTTGTTTCGTCTTTACTCCTT
TTGCGAAACGGCGCCGACTTGCTGTGAGACTTGTGCCAACACAGCCACCT
GGGTGAAGATCCGAGGGTGTTGATGAAGCCACGCATGAAGCTCGGCTTGC
CACATATTGTTGGGCTTGCTAGTCGAGGTACGTTTGGCGGCTGTTCTTCC
GACACTGCAGAAAGCGTCCCCTTTCCGGTGTGTTCCCTGCTGATGTCGTG
TTTCGCTGGGTATGCAGGGCTGTTAAGGCCATCAAGCCTCTGGGGTGCTT
GGCGATGATCGATGACGGCGAGCTCGACTGGAAG GTGTGCTATATTTTGC
AGGCTGTTCTTTGTCGTCAGTACGCGCTTGTCCTTGATTTTTGGTGAAAA
CAAAACACAACATCCGCGCCACGTGAACTGCTGTATCTTGGCGCACATTC
TCCGTGTGTTATGTCGCATTTTCAATTCTTATTGGTAGATTTCGTCTGAC
CCCGATACACCAATTCGATGACGTTCCAAGCTGCTTGCAAAAGAAAAAAA
CAGCAGTGTGATTCGTCTTGGCGCAGACACCCCGAGCACACGACTGGACC
TCCTTTCGTGCGGCTACGCATCCGCTACCGCTGATGTCCAGATGGCATTT
CGCTTGTTTCGAGTGGAGTACCTTGACCGACGGTGTTGTTGCCCCGCGAC
TTCCCTGCATGAATGCACCCACGCATCCTGTGCCGTGTGATGTCAGGTGA
TCGGTATCGACGTAGACGACCCGTTGGCCAAGGACCTGAACGACATCGCC
GACGTCGAGAAGCTCCTCCCCGGGTACGTATCCGGAATCCGGGAGTGGTT
CCGCTGGTACAAGACCCCCGACGACAAGCCCCTCAACGCCTTCGGCTTCG
ACGAGAAGGCTTTGAACAAG GTGCGCGCATGCCTGCGGGGCCAATTTAAG
CAACGCGCTTTGGGTTGGACGGAGAGAAGAAGATTGTCGGGCTGGTTGGC
GTGGAGGGCGTGTGGGTGCCGGGTTGTGCTGGGGTCTTGACTGGCACGGC
AAGAGCTGGGGTATCGTCGAGTATGCGATGTTTTTGTACGACCAAACCGG
GGATTGTGAGAGGCAACTCATGGTTTCTTGAGCGACGCACATGCTAGTTT
CCGGAGCTACACTGATCGCCCGCCCGGCGCCGAAATGAAGGTTTTGTATC
TACGAGATTGGACTCAAAGGGCATCACCACCACCTTATGCAACATCCTGA
TAAACCCCTCCGGCTCCAGCTTGGTATGTGAGCACAACAGCAAGACAACG
GCAACTCTGTTTGCCCAAATGCGCCTTATCTCCCCGGTCATCTCAAACGG
TGCAACTCGCATGCATGCATGGTCTTGTTTCCTTGTGGGCGGCAGGAGGA
GACGATGAAGGTGATCGACGAGTGCAACGGGCACTGGAAGGCGCTTGTCG
ACGGAAAGACCGAGGCTGGCAAGATGTGGATCAAGTAG AGGAGGAGCGGA
ACGC back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig100:189238..192391-
>mRNA_Ecto-sp6_S_contig100.709.1 ID=mRNA_Ecto-sp6_S_contig100.709.1|Name=mRNA_Ecto-sp6_S_contig100.709.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=696bp|location=Sequence derived from alignment at Ecto-sp6_S_contig100:189238..192391- (Ectocarpus species6 EcLAC_371) back to top