prot_Ecto-sp6_S_contig100.705.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig100.705.1
Unique Nameprot_Ecto-sp6_S_contig100.705.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length83
Homology
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BLAST of mRNA_Ecto-sp6_S_contig100.705.1 vs. uniprot
Match: A0A6H5JGM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGM7_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.160e-8
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 0 
Query:    1 VGSGWRHDRDLQQNPLRVGECICSRTDCVLGLY 33
            VG GW H+RDL  +PL+ GECIC R DCV+ LY
Sbjct:   62 VGEGWTHERDLVGDPLKAGECICRRADCVVNLY 94
[Close]
BLAST of mRNA_Ecto-sp6_S_contig100.705.1 vs. uniprot
Match: A0A6H5KE39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE39_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 2.660e-7
Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 0 
Query:    1 VGSGWRHDRDLQQNPLRVGECICSRTDCVLGL 32
            VG  W H+RDLQ +PL+VGECIC+R DC  G+
Sbjct:   61 VGQEWPHERDLQGDPLKVGECICTRPDCAGGI 92
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig100.705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGM7_9PHAE1.160e-863.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE39_9PHAE2.660e-762.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig100contigEcto-sp6_S_contig100:177801..179099 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig100.705.1mRNA_Ecto-sp6_S_contig100.705.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig100 177801..179099 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig100.705.1 ID=prot_Ecto-sp6_S_contig100.705.1|Name=mRNA_Ecto-sp6_S_contig100.705.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=83bp
VGSGWRHDRDLQQNPLRVGECICSRTDCVLGLYNSTCGGARGKKKDLCTK
WRSDSGRRWAGTPRRALRSASVQPSTESEVLA*
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